mRNA_Ecto-sp8_S_contig10838.1225.1 (mRNA) Ectocarpus species8 EcLAC_412

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp8_S_contig10838.1225.1
Unique NamemRNA_Ecto-sp8_S_contig10838.1225.1
TypemRNA
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Homology
BLAST of mRNA_Ecto-sp8_S_contig10838.1225.1 vs. uniprot
Match: D7FPA6_ECTSI (Glutamine synthetase n=3 Tax=Ectocarpus TaxID=2879 RepID=D7FPA6_ECTSI)

HSP 1 Score: 633 bits (1633), Expect = 9.700e-228
Identity = 294/297 (98.99%), Postives = 296/297 (99.66%), Query Frame = 2
Query:  221 PKWNYDGSSTGQAPGEDSEVIIYPQAVYPDPFRGGDNIMVLCDTYEPNGTPLPTNTRKECAAIMEKAKDLVPWFGIEQEYTLFEADGVTPFGWPKSGYPGPQGPYYCSIGYENAFGRHIMEAHYKACLFAGVNISGTNGEVMPGQWEYQVGPCEGITSGDELWISRYLLQRVCEQFGVIVSLDPKPIPGDWNGAGCHTNYSTKPMREEGGYKDIIAAIEKLGEKHDEHIAAYGEGNERRLTGKHETASMDKFSYGVANRGASIRIGRDVEKEQKGYFEDRRPSSNMDPYVVTGMIVK 1111
            PKWNYDGSSTGQAPGEDSEVIIYPQAVYPDPFRGGDNIMVLCDTYEP+GTPLPTNTRKECAAIMEKAK+LVPWFGIEQEYTLFEADGVTPFGWPKSGYPGPQGPYYCSIGYENAFGRHIMEAHYKACLFAGVNISGTNGEVMPGQWEYQVGPCEGI SGDELWISRYLLQRVCEQFGVIVSLDPKPIPGDWNGAGCHTNYSTKPMREEGGYKDIIAAIEKLGEKHDEHIAAYGEGNERRLTGKHETASMDKFSYGVANRGASIRIGRDVEKEQKGYFEDRRPSSNMDPYVVTGMIVK
Sbjct:   63 PKWNYDGSSTGQAPGEDSEVIIYPQAVYPDPFRGGDNIMVLCDTYEPDGTPLPTNTRKECAAIMEKAKELVPWFGIEQEYTLFEADGVTPFGWPKSGYPGPQGPYYCSIGYENAFGRHIMEAHYKACLFAGVNISGTNGEVMPGQWEYQVGPCEGIASGDELWISRYLLQRVCEQFGVIVSLDPKPIPGDWNGAGCHTNYSTKPMREEGGYKDIIAAIEKLGEKHDEHIAAYGEGNERRLTGKHETASMDKFSYGVANRGASIRIGRDVEKEQKGYFEDRRPSSNMDPYVVTGMIVK 359          
BLAST of mRNA_Ecto-sp8_S_contig10838.1225.1 vs. uniprot
Match: A0A835YJ88_9STRA (Glutamine synthetase n=3 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJ88_9STRA)

HSP 1 Score: 544 bits (1401), Expect = 2.130e-192
Identity = 246/297 (82.83%), Postives = 270/297 (90.91%), Query Frame = 2
Query:  221 PKWNYDGSSTGQAPGEDSEVIIYPQAVYPDPFRGGDNIMVLCDTYEPNGTPLPTNTRKECAAIMEKAKDLVPWFGIEQEYTLFEADGVTPFGWPKSGYPGPQGPYYCSIGYENAFGRHIMEAHYKACLFAGVNISGTNGEVMPGQWEYQVGPCEGITSGDELWISRYLLQRVCEQFGVIVSLDPKPIPGDWNGAGCHTNYSTKPMREEGGYKDIIAAIEKLGEKHDEHIAAYGEGNERRLTGKHETASMDKFSYGVANRGASIRIGRDVEKEQKGYFEDRRPSSNMDPYVVTGMIVK 1111
            PKWN+DGSSTGQAPG+DSEVIIYPQAVY DPFRGGDNIM LCD Y+P+GTP+  NTR  CA   ++A+  +PWFGIEQEYTLFEADGVTPFGWPK GYPGPQGPYYC+IG ENAFGRHIMEAHYKACLFAGV ISGTNGEVMPGQWEYQVGPC GIT+GD+LW+SRYLLQRVCE FGVIVSLDPKPIPGDWNGAGCHTNYST+PMR  GGY  II AIEKLG+KH++HI AYGEGNERRLTG+HETAS+ +FSYGVANRGASIRIGR VE+E  GYFEDRRP+SNMDPYVVTGMI++
Sbjct:   63 PKWNFDGSSTGQAPGDDSEVIIYPQAVYADPFRGGDNIMALCDCYKPDGTPIDNNTRLACAKACQEAEKEIPWFGIEQEYTLFEADGVTPFGWPKGGYPGPQGPYYCAIGKENAFGRHIMEAHYKACLFAGVKISGTNGEVMPGQWEYQVGPCVGITAGDDLWVSRYLLQRVCELFGVIVSLDPKPIPGDWNGAGCHTNYSTEPMRNPGGYAKIIEAIEKLGKKHEQHIKAYGEGNERRLTGRHETASISQFSYGVANRGASIRIGRQVEEEGCGYFEDRRPASNMDPYVVTGMIIQ 359          
BLAST of mRNA_Ecto-sp8_S_contig10838.1225.1 vs. uniprot
Match: A0A7S3XXT5_HETAK (Glutamine synthetase n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XXT5_HETAK)

HSP 1 Score: 499 bits (1285), Expect = 1.560e-174
Identity = 228/297 (76.77%), Postives = 256/297 (86.20%), Query Frame = 2
Query:  221 PKWNYDGSSTGQAPGEDSEVIIYPQAVYPDPFRGGDNIMVLCDTYEPNGTPLPTNTRKECAAIMEKAKDLVPWFGIEQEYTLFEADGVTPFGWPKSGYPGPQGPYYCSIGYENAFGRHIMEAHYKACLFAGVNISGTNGEVMPGQWEYQVGPCEGITSGDELWISRYLLQRVCEQFGVIVSLDPKPIPGDWNGAGCHTNYSTKPMREEGGYKDIIAAIEKLGEKHDEHIAAYGEGNERRLTGKHETASMDKFSYGVANRGASIRIGRDVEKEQKGYFEDRRPSSNMDPYVVTGMIVK 1111
            P WN+DGSSTGQAPGEDSEVII P+A++PDPFR   NI+V+CD Y+PNG P+ +NTR +CA IME+AKDL+PWFGIEQEYTLFEADGVTPFGWPKSGYP PQGPYYC  G ENA+GR I+EAHYKACL+AG+NISG N EVMPGQWEYQVGP  GI SGD +W+SRYLL RVCE FGVIVS DPKPIPGDWNGAGCHTN+ST+PMR  GG+  I  A++KLGEKH EHIAAYGEGNERRLTGKHETAS+ +FSYGVANRG S RI R  E +  GYFEDRRP+SNMDPYVVTG IV+
Sbjct:   78 PDWNFDGSSTGQAPGEDSEVIIKPKAIFPDPFRRSGNILVMCDCYKPNGEPIFSNTRAKCAEIMERAKDLLPWFGIEQEYTLFEADGVTPFGWPKSGYPLPQGPYYCGNGTENAYGRPIVEAHYKACLYAGINISGINAEVMPGQWEYQVGPSVGIDSGDHMWVSRYLLTRVCEDFGVIVSYDPKPIPGDWNGAGCHTNFSTEPMRRPGGFAVIEDALKKLGEKHAEHIAAYGEGNERRLTGKHETASITQFSYGVANRGCSCRIPRTTEADGYGYFEDRRPASNMDPYVVTGKIVE 374          
BLAST of mRNA_Ecto-sp8_S_contig10838.1225.1 vs. uniprot
Match: A0A7S2XW55_9STRA (Glutamine synthetase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XW55_9STRA)

HSP 1 Score: 479 bits (1233), Expect = 6.840e-167
Identity = 221/297 (74.41%), Postives = 250/297 (84.18%), Query Frame = 2
Query:  221 PKWNYDGSSTGQAPGEDSEVIIYPQAVYPDPFRGGDNIMVLCDTYEPNGTPLPTNTRKECAAIMEKAKDLVPWFGIEQEYTLFEADGVTPFGWPKSGYPGPQGPYYCSIGYENAFGRHIMEAHYKACLFAGVNISGTNGEVMPGQWEYQVGPCEGITSGDELWISRYLLQRVCEQFGVIVSLDPKPIPGDWNGAGCHTNYSTKPMREEGGYKDIIAAIEKLGEKHDEHIAAYGEGNERRLTGKHETASMDKFSYGVANRGASIRIGRDVEKEQKGYFEDRRPSSNMDPYVVTGMIVK 1111
            P WNYDGSSTGQAPGEDSEV++ PQA++PDPFRGGDNI+V+CD Y+P+ TP+  NTR     I  + ++LVPWFGIEQEYTLFEADGVTPFGWPK  +P PQGPYYCS G EN++GR I+EAHY+ACL+AGVNISG NGEVMPGQWEYQVGP  GI SGD + +SRYLL RV E FGVIVSLDPKPIPGDWNGAGCHTN+ST+PMR+ GG   II A+EKL  KH EHIAAYGEGNERRLTGKHETAS++ FSYGVANRG S RI R VE +  GYFEDRRP+SNMDPYVVT M+ K
Sbjct:   61 PIWNYDGSSTGQAPGEDSEVMLKPQAIFPDPFRGGDNIIVVCDCYKPDMTPIDGNTRAVAEDIFSQKQELVPWFGIEQEYTLFEADGVTPFGWPKHAFPAPQGPYYCSNGTENSYGRPIVEAHYRACLYAGVNISGINGEVMPGQWEYQVGPSTGIESGDHMLVSRYLLTRVAEDFGVIVSLDPKPIPGDWNGAGCHTNFSTEPMRQPGGKAVIIDALEKLKLKHAEHIAAYGEGNERRLTGKHETASIEAFSYGVANRGCSCRIPRSVEADDCGYFEDRRPASNMDPYVVTSMVFK 357          
BLAST of mRNA_Ecto-sp8_S_contig10838.1225.1 vs. uniprot
Match: A0A485LAW0_9STRA (Glutamine synthetase n=5 Tax=Aphanomyces TaxID=100860 RepID=A0A485LAW0_9STRA)

HSP 1 Score: 479 bits (1232), Expect = 8.120e-167
Identity = 216/297 (72.73%), Postives = 248/297 (83.50%), Query Frame = 2
Query:  221 PKWNYDGSSTGQAPGEDSEVIIYPQAVYPDPFRGGDNIMVLCDTYEPNGTPLPTNTRKECAAIMEKAKDLVPWFGIEQEYTLFEADGVTPFGWPKSGYPGPQGPYYCSIGYENAFGRHIMEAHYKACLFAGVNISGTNGEVMPGQWEYQVGPCEGITSGDELWISRYLLQRVCEQFGVIVSLDPKPIPGDWNGAGCHTNYSTKPMREEGGYKDIIAAIEKLGEKHDEHIAAYGEGNERRLTGKHETASMDKFSYGVANRGASIRIGRDVEKEQKGYFEDRRPSSNMDPYVVTGMIVK 1111
            P WN+DGSSTGQAPGEDSEV++ P A+Y DPFRGG++I+VLCD Y+P+ TP+P+NTR + A +M+ +    PWFGIEQEYTLFEAD VTP+GWPK GYPGPQGPYYC  G  +AFGR I +AHY+ACLFAG+ +SG N EVMPGQWEYQVGPC GI SGD++WISRY+L RVCE FGVIVS DPKPIPGDWNGAGCHTN STK MRE GG   II A+EK+  KH EHIAAYG GNERRLTG+HETAS+DKF+YGVANRGASIRI R  E + KGYFEDRRP+SNMDPY VT  I+K
Sbjct:   53 PIWNFDGSSTGQAPGEDSEVLLKPAAIYKDPFRGGNHILVLCDCYKPDMTPIPSNTRYDAARVMKASASHEPWFGIEQEYTLFEADKVTPYGWPKGGYPGPQGPYYCGAGAHSAFGRLIADAHYRACLFAGIRVSGINAEVMPGQWEYQVGPCVGIASGDQMWISRYILLRVCEDFGVIVSFDPKPIPGDWNGAGCHTNVSTKAMRENGGIAVIIEALEKMKLKHKEHIAAYGTGNERRLTGRHETASIDKFTYGVANRGASIRIPRSTEADGKGYFEDRRPASNMDPYTVTSRILK 349          
BLAST of mRNA_Ecto-sp8_S_contig10838.1225.1 vs. uniprot
Match: A0A067CFX7_SAPPC (Glutamine synthetase n=6 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CFX7_SAPPC)

HSP 1 Score: 476 bits (1225), Expect = 9.410e-166
Identity = 217/297 (73.06%), Postives = 247/297 (83.16%), Query Frame = 2
Query:  221 PKWNYDGSSTGQAPGEDSEVIIYPQAVYPDPFRGGDNIMVLCDTYEPNGTPLPTNTRKECAAIMEKAKDLVPWFGIEQEYTLFEADGVTPFGWPKSGYPGPQGPYYCSIGYENAFGRHIMEAHYKACLFAGVNISGTNGEVMPGQWEYQVGPCEGITSGDELWISRYLLQRVCEQFGVIVSLDPKPIPGDWNGAGCHTNYSTKPMREEGGYKDIIAAIEKLGEKHDEHIAAYGEGNERRLTGKHETASMDKFSYGVANRGASIRIGRDVEKEQKGYFEDRRPSSNMDPYVVTGMIVK 1111
            P WN+DGSST QAPG DSEV++ P A+Y DPFR G++I+VLCD Y+P+ TP+PTNTR + A +ME AK  VPWFGIEQEYTLFE D VTP+GWPK G+PGPQGPYYC  G  +AFGR I +AHY+ACL+AGV +SG N EVMPGQWEYQVGPC GI SGD+LWISRY++ RVCE FGVIVS DPKPIPGDWNGAGCHTN STK MRE+GG   II A+EKL  KH  HIA YG GNERRLTG+HETAS+D+FSYGVANRGASIRI R  E + KGYFEDRRP+SNMDPYVVTG I+K
Sbjct:   53 PIWNFDGSSTDQAPGADSEVMLKPAAIYKDPFRRGNHILVLCDCYKPDMTPIPTNTRFDAARVMEAAKAHVPWFGIEQEYTLFEKDQVTPYGWPKGGFPGPQGPYYCGAGAHSAFGRLIADAHYRACLYAGVRVSGINAEVMPGQWEYQVGPCTGIESGDQLWISRYIMLRVCEDFGVIVSFDPKPIPGDWNGAGCHTNVSTKAMREDGGMAKIIEALEKLKLKHKVHIAVYGTGNERRLTGRHETASIDQFSYGVANRGASIRIPRQAEADGKGYFEDRRPASNMDPYVVTGRIIK 349          
BLAST of mRNA_Ecto-sp8_S_contig10838.1225.1 vs. uniprot
Match: A0A024G6F3_9STRA (Glutamine synthetase n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G6F3_9STRA)

HSP 1 Score: 475 bits (1222), Expect = 2.790e-165
Identity = 216/297 (72.73%), Postives = 246/297 (82.83%), Query Frame = 2
Query:  221 PKWNYDGSSTGQAPGEDSEVIIYPQAVYPDPFRGGDNIMVLCDTYEPNGTPLPTNTRKECAAIMEKAKDLVPWFGIEQEYTLFEADGVTPFGWPKSGYPGPQGPYYCSIGYENAFGRHIMEAHYKACLFAGVNISGTNGEVMPGQWEYQVGPCEGITSGDELWISRYLLQRVCEQFGVIVSLDPKPIPGDWNGAGCHTNYSTKPMREEGGYKDIIAAIEKLGEKHDEHIAAYGEGNERRLTGKHETASMDKFSYGVANRGASIRIGRDVEKEQKGYFEDRRPSSNMDPYVVTGMIVK 1111
            P WN+DGSSTGQAPGEDSEV++ P A+Y DPFR G +I+VLCD  +P+GTP+  NTR + A +M+ A    PWFGIEQEYTLFEAD VTP+GWPK G+PGPQGPYYC  G  +A+GR I +AHY+ACL+AG+NISG N EVMPGQWEYQVGPC GI SGD+LWISRY+L RVCE FGV VS DPKPIPGDWNGAGCHTNYSTK MRE+GG   II AIEKL  KH  HIAAYG+GNERRLTG+HETAS+D FSYG+ANRGAS+RI R  E E KGYFEDRRPSSNMDPY+VT  +VK
Sbjct:   54 PIWNFDGSSTGQAPGEDSEVLLRPAAIYKDPFRKGKHILVLCDCLKPDGTPISNNTRADAARVMKAAASHEPWFGIEQEYTLFEADNVTPYGWPKGGFPGPQGPYYCGAGAHSAYGRMIADAHYRACLYAGINISGINAEVMPGQWEYQVGPCTGIESGDQLWISRYVLLRVCEDFGVNVSWDPKPIPGDWNGAGCHTNYSTKEMREDGGMGKIIEAIEKLKIKHHVHIAAYGQGNERRLTGRHETASIDSFSYGIANRGASVRIPRVAETEGKGYFEDRRPSSNMDPYLVTSRLVK 350          
BLAST of mRNA_Ecto-sp8_S_contig10838.1225.1 vs. uniprot
Match: A0A2D4BU85_PYTIN (Glutamine synthetase n=2 Tax=Pythium TaxID=4797 RepID=A0A2D4BU85_PYTIN)

HSP 1 Score: 474 bits (1219), Expect = 7.970e-165
Identity = 216/297 (72.73%), Postives = 245/297 (82.49%), Query Frame = 2
Query:  221 PKWNYDGSSTGQAPGEDSEVIIYPQAVYPDPFRGGDNIMVLCDTYEPNGTPLPTNTRKECAAIMEKAKDLVPWFGIEQEYTLFEADGVTPFGWPKSGYPGPQGPYYCSIGYENAFGRHIMEAHYKACLFAGVNISGTNGEVMPGQWEYQVGPCEGITSGDELWISRYLLQRVCEQFGVIVSLDPKPIPGDWNGAGCHTNYSTKPMREEGGYKDIIAAIEKLGEKHDEHIAAYGEGNERRLTGKHETASMDKFSYGVANRGASIRIGRDVEKEQKGYFEDRRPSSNMDPYVVTGMIVK 1111
            P WN+DGSSTGQAPGEDSEV++ P A++ DPFRGG NI+VLCD  +P+ TP+  NTR +CA +M  A    PWFGIEQEYTLFEAD  TP+GWPK GYPGPQGPYYC  G  +AFGR I++AHY+ACL+AGV +SG N EVMPGQWEYQVGPCEG+ +GD LWISRY+L RVCE FGV VS DPKPIPGDWNGAGCHTNYST+ MRE+GG   II AIEK+  KH  HIAAYG+GNERRLTG+HETAS+D FSYGVANRGASIRI R  E + KGYFEDRRP+SNMDPYVVT  IVK
Sbjct:   54 PIWNFDGSSTGQAPGEDSEVLLRPAAIFKDPFRGGKNILVLCDCLKPDMTPIANNTRVDCARVMAAAASHKPWFGIEQEYTLFEADKTTPYGWPKGGYPGPQGPYYCGAGAHSAFGRLIVDAHYRACLYAGVKVSGINAEVMPGQWEYQVGPCEGMEAGDHLWISRYILLRVCEDFGVNVSWDPKPIPGDWNGAGCHTNYSTQAMREDGGMAVIIEAIEKMKLKHKVHIAAYGQGNERRLTGRHETASIDTFSYGVANRGASIRIPRSAEADGKGYFEDRRPASNMDPYVVTARIVK 350          
BLAST of mRNA_Ecto-sp8_S_contig10838.1225.1 vs. uniprot
Match: A0A7S0P9X0_CAFRO (Glutamine synthetase n=3 Tax=Sar TaxID=2698737 RepID=A0A7S0P9X0_CAFRO)

HSP 1 Score: 474 bits (1219), Expect = 1.870e-164
Identity = 214/295 (72.54%), Postives = 239/295 (81.02%), Query Frame = 2
Query:  221 PKWNYDGSSTGQAPGEDSEVIIYPQAVYPDPFRGGDNIMVLCDTYEPNGTPLPTNTRKECAAIMEKAKDLVPWFGIEQEYTLFEADGVTPFGWPKSGYPGPQGPYYCSIGYENAFGRHIMEAHYKACLFAGVNISGTNGEVMPGQWEYQVGPCEGITSGDELWISRYLLQRVCEQFGVIVSLDPKPIPGDWNGAGCHTNYSTKPMREEGGYKDIIAAIEKLGEKHDEHIAAYGEGNERRLTGKHETASMDKFSYGVANRGASIRIGRDVEKEQKGYFEDRRPSSNMDPYVVTGMI 1105
            P+WN+DGSST QA G DSEVI+ P  + PDPFRGG++I+VLC+ Y P+GT  PTNTR   AA   K +   PWFG+EQEYTLFEADG TP GWPK GYPGPQGPYYCS G ENAFGR I +AHY+ACLFAG+ +SG N EVMPGQWEYQVGPC GI SGD +W+SRY++QRVCE FGV+ S DPKPIPGDWNGAGCH NYSTKPMRE GGY  II AIEKLG KH EH+A YG GNERRLTG HETA +DKFSYGVANRGAS+RI R  E +  GYFEDRRP+SNMDPYVVT  I
Sbjct:   80 PEWNFDGSSTKQAEGHDSEVILKPVRIVPDPFRGGEHILVLCECYRPDGTAHPTNTRAPAAAAFAKDEASAPWFGVEQEYTLFEADGRTPLGWPKGGYPGPQGPYYCSAGAENAFGRAIADAHYRACLFAGIKVSGINAEVMPGQWEYQVGPCLGIESGDHMWLSRYIMQRVCEDFGVVCSFDPKPIPGDWNGAGCHVNYSTKPMREAGGYAAIIEAIEKLGAKHLEHMAVYGRGNERRLTGAHETAPIDKFSYGVANRGASVRIPRTTEADDCGYFEDRRPASNMDPYVVTAKI 374          
BLAST of mRNA_Ecto-sp8_S_contig10838.1225.1 vs. uniprot
Match: C7F8H7_9ROSI (Glutamine synthetase (Fragment) n=4 Tax=rosids TaxID=71275 RepID=C7F8H7_9ROSI)

HSP 1 Score: 470 bits (1209), Expect = 6.090e-164
Identity = 211/299 (70.57%), Postives = 247/299 (82.61%), Query Frame = 2
Query:  221 PKWNYDGSSTGQAPGEDSEVIIYPQAVYPDPFRGGDNIMVLCDTYEPNGTPLPTNTRKECAAIM--EKAKDLVPWFGIEQEYTLFEADGVTPFGWPKSGYPGPQGPYYCSIGYENAFGRHIMEAHYKACLFAGVNISGTNGEVMPGQWEYQVGPCEGITSGDELWISRYLLQRVCEQFGVIVSLDPKPIPGDWNGAGCHTNYSTKPMREEGGYKDIIAAIEKLGEKHDEHIAAYGEGNERRLTGKHETASMDKFSYGVANRGASIRIGRDVEKEQKGYFEDRRPSSNMDPYVVTGMIVK 1111
            PKWNYDGSSTGQAPGEDSEVI+YPQA++ DPFRGG+NI+V+CDTY P G P+PTN R   A I   EK  D VPWFGIEQEYTL + +   P GWP  GYPGPQGPYYC  G + +FGR I +AHYKAC++AG+NISGTNGEVMPGQWEYQVGP  GI +GD +WISRY+L+R+ EQ GV++SLDPKPI GDWNGAGCHTNYSTK MREEGG++ I  AI  L  +H EHI+AYGEGNERRLTGKHETAS+D FS+GVANRG SIR+GR+ EK+ KGY EDRRP+SNMDPY+VT ++ +
Sbjct:   18 PKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRGGNNILVMCDTYTPQGEPIPTNKRHRAAEIFSNEKVIDEVPWFGIEQEYTLLQTNVKWPLGWPVGGYPGPQGPYYCGAGADKSFGRDISDAHYKACMYAGINISGTNGEVMPGQWEYQVGPSVGIDAGDHIWISRYILERITEQAGVVLSLDPKPIEGDWNGAGCHTNYSTKTMREEGGFEAIKKAILNLPLRHKEHISAYGEGNERRLTGKHETASIDTFSWGVANRGCSIRVGRETEKQGKGYLEDRRPASNMDPYIVTSLLAE 316          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig10838.1225.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FPA6_ECTSI9.700e-22898.99Glutamine synthetase n=3 Tax=Ectocarpus TaxID=2879... [more]
A0A835YJ88_9STRA2.130e-19282.83Glutamine synthetase n=3 Tax=Tribonema minus TaxID... [more]
A0A7S3XXT5_HETAK1.560e-17476.77Glutamine synthetase n=3 Tax=Heterosigma akashiwo ... [more]
A0A7S2XW55_9STRA6.840e-16774.41Glutamine synthetase n=1 Tax=Fibrocapsa japonica T... [more]
A0A485LAW0_9STRA8.120e-16772.73Glutamine synthetase n=5 Tax=Aphanomyces TaxID=100... [more]
A0A067CFX7_SAPPC9.410e-16673.06Glutamine synthetase n=6 Tax=Saprolegniaceae TaxID... [more]
A0A024G6F3_9STRA2.790e-16572.73Glutamine synthetase n=1 Tax=Albugo candida TaxID=... [more]
A0A2D4BU85_PYTIN7.970e-16572.73Glutamine synthetase n=2 Tax=Pythium TaxID=4797 Re... [more]
A0A7S0P9X0_CAFRO1.870e-16472.54Glutamine synthetase n=3 Tax=Sar TaxID=2698737 Rep... [more]
C7F8H7_9ROSI6.090e-16470.57Glutamine synthetase (Fragment) n=4 Tax=rosids Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig10838contigEcto-sp8_S_contig10838:3696..6566 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score552.0
Seed ortholog evalue1.5e-154
Seed eggNOG ortholog2880.D7FPA6
Model size1111
KEGG rclassRC00010,RC02798
KEGG koko:K01915
KEGG ReactionR00253
KEGG Pathwayko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727
Hectar predicted targeting categoryother localisation
Exons5
EggNOG free text desc.glutamine biosynthetic process
EggNOG OGsCOG0174@1,KOG0683@2759
Ec32 ortholog descriptionGlutamate ammonia ligase
Ec32 orthologEc-15_004110.1
EC6.3.1.2
Cds size777
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko04147
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig10838.1225.1prot_Ecto-sp8_S_contig10838.1225.1Ectocarpus species8 EcLAC_412polypeptideEcto-sp8_S_contig10838 4375..6566 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681143176.151034-UTR-Ecto-sp8_S_contig10838:3695..38111681143176.151034-UTR-Ecto-sp8_S_contig10838:3695..3811Ectocarpus species8 EcLAC_412UTREcto-sp8_S_contig10838 3696..3811 +
1681143176.1620429-UTR-Ecto-sp8_S_contig10838:4156..43741681143176.1620429-UTR-Ecto-sp8_S_contig10838:4156..4374Ectocarpus species8 EcLAC_412UTREcto-sp8_S_contig10838 4157..4374 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681143176.1718097-CDS-Ecto-sp8_S_contig10838:4374..44581681143176.1718097-CDS-Ecto-sp8_S_contig10838:4374..4458Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig10838 4375..4458 +
1681143176.1847248-CDS-Ecto-sp8_S_contig10838:5191..54401681143176.1847248-CDS-Ecto-sp8_S_contig10838:5191..5440Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig10838 5192..5440 +
1681143176.1935942-CDS-Ecto-sp8_S_contig10838:5708..59631681143176.1935942-CDS-Ecto-sp8_S_contig10838:5708..5963Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig10838 5709..5963 +
1681143176.2055092-CDS-Ecto-sp8_S_contig10838:6377..65661681143176.2055092-CDS-Ecto-sp8_S_contig10838:6377..6566Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig10838 6378..6566 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp8_S_contig10838.1225.1

>prot_Ecto-sp8_S_contig10838.1225.1 ID=prot_Ecto-sp8_S_contig10838.1225.1|Name=mRNA_Ecto-sp8_S_contig10838.1225.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=259bp
MVLCDTYEPNGTPLPTNTRKECAAIMEKAKDLVPWFGIEQEYTLFEADGV
TPFGWPKSGYPGPQGPYYCSIGYENAFGRHIMEAHYKACLFAGVNISGTN
GEVMPGQWEYQVGPCEGITSGDELWISRYLLQRVCEQFGVIVSLDPKPIP
GDWNGAGCHTNYSTKPMREEGGYKDIIAAIEKLGEKHDEHIAAYGEGNER
RLTGKHETASMDKFSYGVANRGASIRIGRDVEKEQKGYFEDRRPSSNMDP
YVVTGMIVK
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mRNA from alignment at Ecto-sp8_S_contig10838:3696..6566+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp8_S_contig10838.1225.1 ID=mRNA_Ecto-sp8_S_contig10838.1225.1|Name=mRNA_Ecto-sp8_S_contig10838.1225.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=2871bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10838:3696..6566+ (Ectocarpus species8 EcLAC_412)
GAAAATTGATTAAAAAAGAATAGAGCGCACCGGTTGTATGCATAGATGCG TTGGTGTTGGGAGCGGTTGGTTGCAACTCGTCAACACTGCATCGTCGGTT GGTATTTTCAGCTTGCAAAGGGTTGCAAGCTAGAGAGGCCTGGATTATTC TCTTTGCCAGAGTGTGGGCGAGACGGGAAAGACTCGTGTGAAACGCTGAA ATAGTCTGCGTGATGCAGGTGGCGAGTGAAGTGATGGGCGAGACGGGAAA GACTCTTGTGAAACGCTGAAATATTCTGCGTCATGCAGATGGCGAGTGAA GAAGTGAAATGATAATAGTGCTGGCGAGGGGAGTAACCCTCCTCGGAATG AAACAATGTGCCGGTTCATTCGGACCCCACGACTAACTAATGTAGAAGCC TATTTCAACCATTTGACAGTCAGCATATGCCGAAATCAGGCTCGTCGGTC TCTCAACCGTTTTTTTTTTCCTTTTCAACTGCGAACAAAATCTCAGGCCC AAATTTGTGCGTTTACTCTTCTTACTACTTTTTACTTCTTCAACCATAAA TGAAATAATATCAGGCCCAAGTGGAACTACGACGGGTCCTCCACCGGCCA GGCGCCCGGAGAGGACTCCGAGGTGATCATCTACCCCCAGGCCGTCTACC CCGACCCCTTCCGCGGAGGCGACAACATCATGGTGCTTTGCGACACCTAC GAGCCCAACGGGACCCCGCTCCCTACCAACACCCGCAAGGAGTGCGCCGC TATCATGGAGAAGGTGAGCTTTGCGACAACTTTTCGCTTGGTGAATTTAA TATAAGCCAACTGATGGATGGTACTCTCGCCACGTTCCTTGGAAAAATGG TACCTGGCATGCCGTAAATAAATGTCGGAGAGGTGGTACTCCCCGGCCGT GTTAAAACAGTGACATTTTTTTTTTGTGGCGTGTTTCTCCACACCCATGA GAAGTATTGTACCACTGCCGAAGAAGGTAGTTTTGGGTGCATCGCGTCGA GGTCTTTCCTGAGAGGTATCGGTTGGTGTATGCACCACCGTCCTAATATA GTTGTGGAGAAATACGCTACGAAGAAAACGCTAACACGGGGGTGCCATCT CTCCGACTCTTGCGGTCTGTATCCCCTCTACCACAGGGCGATGTGTGTTC ACTATGGCAACGCATGATTATTATTATTTGAGTACTTCATTCGACGCCAC CTCCCGGCGAACACCACAAAAGCCCAGTTTCCAGTCGGTTTCAGTCCACG TACCTACTGAAAAGACTCCAACACATCCCTTTCGACTGAGGTTATATCTC GAACGGGTAGACTTTCTGTGAGGTTGTGTTACTTTCTAAAAACACCACAG CAGCAGTCTTCGGTTTGGGGTACCCTTACCCTAAACCCTAAACCCTAAGC TCTCTTTAAGGGAGTCAACACATCCTCTCCCGCCTTTTCAACAAGCTCTC GTCGCAACCGCCATGTATGCTACCACCCACCGCTTGAATTTCGCAGGCGA AGGACCTGGTGCCGTGGTTCGGTATCGAGCAGGAGTACACCCTGTTCGAG GCAGACGGCGTTACCCCCTTCGGGTGGCCCAAGAGCGGATACCCGGGACC CCAGGGCCCGTACTACTGCTCCATCGGGTACGAGAACGCCTTCGGCCGCC ACATCATGGAGGCGCACTACAAGGCCTGCCTCTTCGCCGGCGTAAACATC TCGGGAACCAACGGGGAGGTCATGCCCGGACAGTGGGAGTACCAGGTGAC ACCCCCCGTGGTATCTAGCGGATGGTAAGAGGTTGCATCCTGGCTAGGCG AGGCTAGTTCGTGTATATGCCCGGCATCGGCGACTCTAACGCTATGAGTA ATGCTTCGAAAGGCAGGCCCTGGCCTGCGAAGACGTCGCCTCCCAAGACG AGCTGCGTTCAATCGTTTCCGCAGTGTCCTCTCCTGCCCTCCTCGCTGCG TTGCCTCCTATTCTTGGTTCCAGCTCACAGCCTCGCCACCCCACTCGCCG TGACTATTCTCAGGTGGGCCCCTGCGAAGGCATCACCTCTGGAGACGAGC TGTGGATCTCCCGCTACCTGCTCCAGCGCGTGTGCGAGCAGTTCGGCGTG ATCGTGTCGCTCGACCCCAAGCCCATCCCGGGAGACTGGAACGGGGCCGG GTGCCACACCAACTACTCCACCAAGCCCATGCGCGAGGAGGGCGGCTACA AGGATATCATCGCCGCCATCGAGAAGCTCGGCGAGAAGCACGACGAGCAC ATCGCTGCCTACGGCGAGGTGGCTACTTATTTTTGTGTGGTTGCGTGCGG TCGGTTTATTGTTCTGTTTGTGGTCTCTTGAGGCTGTATCGCTCGCTCGC TGCCTCCGGCGTTTCTTTCATGCTGGTGCGGATTTTTTTTTTTTTTTACA TCTTGAGACCGCATGTGTTATGGTAACTGCTTCCGGGGCTGGCTTCTTTT ATTTATTTATTATTCTCTCGTTATGGGGAGGTGTATGCAAGGGTTGTTCG TCCCTTTTCTGTTGAAGAGTCGTGCGACTGGCTCAGAAGTCCCCCCCACC GTTCCACGAACGATCATCATAAACATTACCAACAAACAACAGAGATGGCG ACAGGGTAGTAAGCGTCGTGTGCCACAACAAGACAATAACATTTAACAAC ACGACAACAAACGATACGGACGGTGATGACAGGGTAACGAGCGCCGCTTG ACCGGAAAGCACGAGACCGCGTCGATGGACAAGTTCTCGTACGGCGTGGC CAACCGCGGTGCGTCCATCCGCATCGGCCGCGACGTGGAGAAGGAGCAGA AGGGATACTTCGAGGACCGCAGGCCTTCGTCCAACATGGACCCCTACGTC GTCACCGGCATGATCGTCAAG
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Coding sequence (CDS) from alignment at Ecto-sp8_S_contig10838:3696..6566+

>mRNA_Ecto-sp8_S_contig10838.1225.1 ID=mRNA_Ecto-sp8_S_contig10838.1225.1|Name=mRNA_Ecto-sp8_S_contig10838.1225.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=777bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10838:3696..6566+ (Ectocarpus species8 EcLAC_412)
ATGGTGCTTTGCGACACCTACGAGCCCAACGGGACCCCGCTCCCTACCAA
CACCCGCAAGGAGTGCGCCGCTATCATGGAGAAGGCGAAGGACCTGGTGC
CGTGGTTCGGTATCGAGCAGGAGTACACCCTGTTCGAGGCAGACGGCGTT
ACCCCCTTCGGGTGGCCCAAGAGCGGATACCCGGGACCCCAGGGCCCGTA
CTACTGCTCCATCGGGTACGAGAACGCCTTCGGCCGCCACATCATGGAGG
CGCACTACAAGGCCTGCCTCTTCGCCGGCGTAAACATCTCGGGAACCAAC
GGGGAGGTCATGCCCGGACAGTGGGAGTACCAGGTGGGCCCCTGCGAAGG
CATCACCTCTGGAGACGAGCTGTGGATCTCCCGCTACCTGCTCCAGCGCG
TGTGCGAGCAGTTCGGCGTGATCGTGTCGCTCGACCCCAAGCCCATCCCG
GGAGACTGGAACGGGGCCGGGTGCCACACCAACTACTCCACCAAGCCCAT
GCGCGAGGAGGGCGGCTACAAGGATATCATCGCCGCCATCGAGAAGCTCG
GCGAGAAGCACGACGAGCACATCGCTGCCTACGGCGAGGGTAACGAGCGC
CGCTTGACCGGAAAGCACGAGACCGCGTCGATGGACAAGTTCTCGTACGG
CGTGGCCAACCGCGGTGCGTCCATCCGCATCGGCCGCGACGTGGAGAAGG
AGCAGAAGGGATACTTCGAGGACCGCAGGCCTTCGTCCAACATGGACCCC
TACGTCGTCACCGGCATGATCGTCAAG
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