mRNA_Ecto-sp8_S_contig10838.1225.1 (mRNA) Ectocarpus species8 EcLAC_412
|
Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig10838.1225.1 vs. uniprot
Match: D7FPA6_ECTSI (Glutamine synthetase n=3 Tax=Ectocarpus TaxID=2879 RepID=D7FPA6_ECTSI) HSP 1 Score: 633 bits (1633), Expect = 9.700e-228 Identity = 294/297 (98.99%), Postives = 296/297 (99.66%), Query Frame = 2
Query: 221 PKWNYDGSSTGQAPGEDSEVIIYPQAVYPDPFRGGDNIMVLCDTYEPNGTPLPTNTRKECAAIMEKAKDLVPWFGIEQEYTLFEADGVTPFGWPKSGYPGPQGPYYCSIGYENAFGRHIMEAHYKACLFAGVNISGTNGEVMPGQWEYQVGPCEGITSGDELWISRYLLQRVCEQFGVIVSLDPKPIPGDWNGAGCHTNYSTKPMREEGGYKDIIAAIEKLGEKHDEHIAAYGEGNERRLTGKHETASMDKFSYGVANRGASIRIGRDVEKEQKGYFEDRRPSSNMDPYVVTGMIVK 1111
PKWNYDGSSTGQAPGEDSEVIIYPQAVYPDPFRGGDNIMVLCDTYEP+GTPLPTNTRKECAAIMEKAK+LVPWFGIEQEYTLFEADGVTPFGWPKSGYPGPQGPYYCSIGYENAFGRHIMEAHYKACLFAGVNISGTNGEVMPGQWEYQVGPCEGI SGDELWISRYLLQRVCEQFGVIVSLDPKPIPGDWNGAGCHTNYSTKPMREEGGYKDIIAAIEKLGEKHDEHIAAYGEGNERRLTGKHETASMDKFSYGVANRGASIRIGRDVEKEQKGYFEDRRPSSNMDPYVVTGMIVK
Sbjct: 63 PKWNYDGSSTGQAPGEDSEVIIYPQAVYPDPFRGGDNIMVLCDTYEPDGTPLPTNTRKECAAIMEKAKELVPWFGIEQEYTLFEADGVTPFGWPKSGYPGPQGPYYCSIGYENAFGRHIMEAHYKACLFAGVNISGTNGEVMPGQWEYQVGPCEGIASGDELWISRYLLQRVCEQFGVIVSLDPKPIPGDWNGAGCHTNYSTKPMREEGGYKDIIAAIEKLGEKHDEHIAAYGEGNERRLTGKHETASMDKFSYGVANRGASIRIGRDVEKEQKGYFEDRRPSSNMDPYVVTGMIVK 359
BLAST of mRNA_Ecto-sp8_S_contig10838.1225.1 vs. uniprot
Match: A0A835YJ88_9STRA (Glutamine synthetase n=3 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJ88_9STRA) HSP 1 Score: 544 bits (1401), Expect = 2.130e-192 Identity = 246/297 (82.83%), Postives = 270/297 (90.91%), Query Frame = 2
Query: 221 PKWNYDGSSTGQAPGEDSEVIIYPQAVYPDPFRGGDNIMVLCDTYEPNGTPLPTNTRKECAAIMEKAKDLVPWFGIEQEYTLFEADGVTPFGWPKSGYPGPQGPYYCSIGYENAFGRHIMEAHYKACLFAGVNISGTNGEVMPGQWEYQVGPCEGITSGDELWISRYLLQRVCEQFGVIVSLDPKPIPGDWNGAGCHTNYSTKPMREEGGYKDIIAAIEKLGEKHDEHIAAYGEGNERRLTGKHETASMDKFSYGVANRGASIRIGRDVEKEQKGYFEDRRPSSNMDPYVVTGMIVK 1111
PKWN+DGSSTGQAPG+DSEVIIYPQAVY DPFRGGDNIM LCD Y+P+GTP+ NTR CA ++A+ +PWFGIEQEYTLFEADGVTPFGWPK GYPGPQGPYYC+IG ENAFGRHIMEAHYKACLFAGV ISGTNGEVMPGQWEYQVGPC GIT+GD+LW+SRYLLQRVCE FGVIVSLDPKPIPGDWNGAGCHTNYST+PMR GGY II AIEKLG+KH++HI AYGEGNERRLTG+HETAS+ +FSYGVANRGASIRIGR VE+E GYFEDRRP+SNMDPYVVTGMI++
Sbjct: 63 PKWNFDGSSTGQAPGDDSEVIIYPQAVYADPFRGGDNIMALCDCYKPDGTPIDNNTRLACAKACQEAEKEIPWFGIEQEYTLFEADGVTPFGWPKGGYPGPQGPYYCAIGKENAFGRHIMEAHYKACLFAGVKISGTNGEVMPGQWEYQVGPCVGITAGDDLWVSRYLLQRVCELFGVIVSLDPKPIPGDWNGAGCHTNYSTEPMRNPGGYAKIIEAIEKLGKKHEQHIKAYGEGNERRLTGRHETASISQFSYGVANRGASIRIGRQVEEEGCGYFEDRRPASNMDPYVVTGMIIQ 359
BLAST of mRNA_Ecto-sp8_S_contig10838.1225.1 vs. uniprot
Match: A0A7S3XXT5_HETAK (Glutamine synthetase n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XXT5_HETAK) HSP 1 Score: 499 bits (1285), Expect = 1.560e-174 Identity = 228/297 (76.77%), Postives = 256/297 (86.20%), Query Frame = 2
Query: 221 PKWNYDGSSTGQAPGEDSEVIIYPQAVYPDPFRGGDNIMVLCDTYEPNGTPLPTNTRKECAAIMEKAKDLVPWFGIEQEYTLFEADGVTPFGWPKSGYPGPQGPYYCSIGYENAFGRHIMEAHYKACLFAGVNISGTNGEVMPGQWEYQVGPCEGITSGDELWISRYLLQRVCEQFGVIVSLDPKPIPGDWNGAGCHTNYSTKPMREEGGYKDIIAAIEKLGEKHDEHIAAYGEGNERRLTGKHETASMDKFSYGVANRGASIRIGRDVEKEQKGYFEDRRPSSNMDPYVVTGMIVK 1111
P WN+DGSSTGQAPGEDSEVII P+A++PDPFR NI+V+CD Y+PNG P+ +NTR +CA IME+AKDL+PWFGIEQEYTLFEADGVTPFGWPKSGYP PQGPYYC G ENA+GR I+EAHYKACL+AG+NISG N EVMPGQWEYQVGP GI SGD +W+SRYLL RVCE FGVIVS DPKPIPGDWNGAGCHTN+ST+PMR GG+ I A++KLGEKH EHIAAYGEGNERRLTGKHETAS+ +FSYGVANRG S RI R E + GYFEDRRP+SNMDPYVVTG IV+
Sbjct: 78 PDWNFDGSSTGQAPGEDSEVIIKPKAIFPDPFRRSGNILVMCDCYKPNGEPIFSNTRAKCAEIMERAKDLLPWFGIEQEYTLFEADGVTPFGWPKSGYPLPQGPYYCGNGTENAYGRPIVEAHYKACLYAGINISGINAEVMPGQWEYQVGPSVGIDSGDHMWVSRYLLTRVCEDFGVIVSYDPKPIPGDWNGAGCHTNFSTEPMRRPGGFAVIEDALKKLGEKHAEHIAAYGEGNERRLTGKHETASITQFSYGVANRGCSCRIPRTTEADGYGYFEDRRPASNMDPYVVTGKIVE 374
BLAST of mRNA_Ecto-sp8_S_contig10838.1225.1 vs. uniprot
Match: A0A7S2XW55_9STRA (Glutamine synthetase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XW55_9STRA) HSP 1 Score: 479 bits (1233), Expect = 6.840e-167 Identity = 221/297 (74.41%), Postives = 250/297 (84.18%), Query Frame = 2
Query: 221 PKWNYDGSSTGQAPGEDSEVIIYPQAVYPDPFRGGDNIMVLCDTYEPNGTPLPTNTRKECAAIMEKAKDLVPWFGIEQEYTLFEADGVTPFGWPKSGYPGPQGPYYCSIGYENAFGRHIMEAHYKACLFAGVNISGTNGEVMPGQWEYQVGPCEGITSGDELWISRYLLQRVCEQFGVIVSLDPKPIPGDWNGAGCHTNYSTKPMREEGGYKDIIAAIEKLGEKHDEHIAAYGEGNERRLTGKHETASMDKFSYGVANRGASIRIGRDVEKEQKGYFEDRRPSSNMDPYVVTGMIVK 1111
P WNYDGSSTGQAPGEDSEV++ PQA++PDPFRGGDNI+V+CD Y+P+ TP+ NTR I + ++LVPWFGIEQEYTLFEADGVTPFGWPK +P PQGPYYCS G EN++GR I+EAHY+ACL+AGVNISG NGEVMPGQWEYQVGP GI SGD + +SRYLL RV E FGVIVSLDPKPIPGDWNGAGCHTN+ST+PMR+ GG II A+EKL KH EHIAAYGEGNERRLTGKHETAS++ FSYGVANRG S RI R VE + GYFEDRRP+SNMDPYVVT M+ K
Sbjct: 61 PIWNYDGSSTGQAPGEDSEVMLKPQAIFPDPFRGGDNIIVVCDCYKPDMTPIDGNTRAVAEDIFSQKQELVPWFGIEQEYTLFEADGVTPFGWPKHAFPAPQGPYYCSNGTENSYGRPIVEAHYRACLYAGVNISGINGEVMPGQWEYQVGPSTGIESGDHMLVSRYLLTRVAEDFGVIVSLDPKPIPGDWNGAGCHTNFSTEPMRQPGGKAVIIDALEKLKLKHAEHIAAYGEGNERRLTGKHETASIEAFSYGVANRGCSCRIPRSVEADDCGYFEDRRPASNMDPYVVTSMVFK 357
BLAST of mRNA_Ecto-sp8_S_contig10838.1225.1 vs. uniprot
Match: A0A485LAW0_9STRA (Glutamine synthetase n=5 Tax=Aphanomyces TaxID=100860 RepID=A0A485LAW0_9STRA) HSP 1 Score: 479 bits (1232), Expect = 8.120e-167 Identity = 216/297 (72.73%), Postives = 248/297 (83.50%), Query Frame = 2
Query: 221 PKWNYDGSSTGQAPGEDSEVIIYPQAVYPDPFRGGDNIMVLCDTYEPNGTPLPTNTRKECAAIMEKAKDLVPWFGIEQEYTLFEADGVTPFGWPKSGYPGPQGPYYCSIGYENAFGRHIMEAHYKACLFAGVNISGTNGEVMPGQWEYQVGPCEGITSGDELWISRYLLQRVCEQFGVIVSLDPKPIPGDWNGAGCHTNYSTKPMREEGGYKDIIAAIEKLGEKHDEHIAAYGEGNERRLTGKHETASMDKFSYGVANRGASIRIGRDVEKEQKGYFEDRRPSSNMDPYVVTGMIVK 1111
P WN+DGSSTGQAPGEDSEV++ P A+Y DPFRGG++I+VLCD Y+P+ TP+P+NTR + A +M+ + PWFGIEQEYTLFEAD VTP+GWPK GYPGPQGPYYC G +AFGR I +AHY+ACLFAG+ +SG N EVMPGQWEYQVGPC GI SGD++WISRY+L RVCE FGVIVS DPKPIPGDWNGAGCHTN STK MRE GG II A+EK+ KH EHIAAYG GNERRLTG+HETAS+DKF+YGVANRGASIRI R E + KGYFEDRRP+SNMDPY VT I+K
Sbjct: 53 PIWNFDGSSTGQAPGEDSEVLLKPAAIYKDPFRGGNHILVLCDCYKPDMTPIPSNTRYDAARVMKASASHEPWFGIEQEYTLFEADKVTPYGWPKGGYPGPQGPYYCGAGAHSAFGRLIADAHYRACLFAGIRVSGINAEVMPGQWEYQVGPCVGIASGDQMWISRYILLRVCEDFGVIVSFDPKPIPGDWNGAGCHTNVSTKAMRENGGIAVIIEALEKMKLKHKEHIAAYGTGNERRLTGRHETASIDKFTYGVANRGASIRIPRSTEADGKGYFEDRRPASNMDPYTVTSRILK 349
BLAST of mRNA_Ecto-sp8_S_contig10838.1225.1 vs. uniprot
Match: A0A067CFX7_SAPPC (Glutamine synthetase n=6 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CFX7_SAPPC) HSP 1 Score: 476 bits (1225), Expect = 9.410e-166 Identity = 217/297 (73.06%), Postives = 247/297 (83.16%), Query Frame = 2
Query: 221 PKWNYDGSSTGQAPGEDSEVIIYPQAVYPDPFRGGDNIMVLCDTYEPNGTPLPTNTRKECAAIMEKAKDLVPWFGIEQEYTLFEADGVTPFGWPKSGYPGPQGPYYCSIGYENAFGRHIMEAHYKACLFAGVNISGTNGEVMPGQWEYQVGPCEGITSGDELWISRYLLQRVCEQFGVIVSLDPKPIPGDWNGAGCHTNYSTKPMREEGGYKDIIAAIEKLGEKHDEHIAAYGEGNERRLTGKHETASMDKFSYGVANRGASIRIGRDVEKEQKGYFEDRRPSSNMDPYVVTGMIVK 1111
P WN+DGSST QAPG DSEV++ P A+Y DPFR G++I+VLCD Y+P+ TP+PTNTR + A +ME AK VPWFGIEQEYTLFE D VTP+GWPK G+PGPQGPYYC G +AFGR I +AHY+ACL+AGV +SG N EVMPGQWEYQVGPC GI SGD+LWISRY++ RVCE FGVIVS DPKPIPGDWNGAGCHTN STK MRE+GG II A+EKL KH HIA YG GNERRLTG+HETAS+D+FSYGVANRGASIRI R E + KGYFEDRRP+SNMDPYVVTG I+K
Sbjct: 53 PIWNFDGSSTDQAPGADSEVMLKPAAIYKDPFRRGNHILVLCDCYKPDMTPIPTNTRFDAARVMEAAKAHVPWFGIEQEYTLFEKDQVTPYGWPKGGFPGPQGPYYCGAGAHSAFGRLIADAHYRACLYAGVRVSGINAEVMPGQWEYQVGPCTGIESGDQLWISRYIMLRVCEDFGVIVSFDPKPIPGDWNGAGCHTNVSTKAMREDGGMAKIIEALEKLKLKHKVHIAVYGTGNERRLTGRHETASIDQFSYGVANRGASIRIPRQAEADGKGYFEDRRPASNMDPYVVTGRIIK 349
BLAST of mRNA_Ecto-sp8_S_contig10838.1225.1 vs. uniprot
Match: A0A024G6F3_9STRA (Glutamine synthetase n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G6F3_9STRA) HSP 1 Score: 475 bits (1222), Expect = 2.790e-165 Identity = 216/297 (72.73%), Postives = 246/297 (82.83%), Query Frame = 2
Query: 221 PKWNYDGSSTGQAPGEDSEVIIYPQAVYPDPFRGGDNIMVLCDTYEPNGTPLPTNTRKECAAIMEKAKDLVPWFGIEQEYTLFEADGVTPFGWPKSGYPGPQGPYYCSIGYENAFGRHIMEAHYKACLFAGVNISGTNGEVMPGQWEYQVGPCEGITSGDELWISRYLLQRVCEQFGVIVSLDPKPIPGDWNGAGCHTNYSTKPMREEGGYKDIIAAIEKLGEKHDEHIAAYGEGNERRLTGKHETASMDKFSYGVANRGASIRIGRDVEKEQKGYFEDRRPSSNMDPYVVTGMIVK 1111
P WN+DGSSTGQAPGEDSEV++ P A+Y DPFR G +I+VLCD +P+GTP+ NTR + A +M+ A PWFGIEQEYTLFEAD VTP+GWPK G+PGPQGPYYC G +A+GR I +AHY+ACL+AG+NISG N EVMPGQWEYQVGPC GI SGD+LWISRY+L RVCE FGV VS DPKPIPGDWNGAGCHTNYSTK MRE+GG II AIEKL KH HIAAYG+GNERRLTG+HETAS+D FSYG+ANRGAS+RI R E E KGYFEDRRPSSNMDPY+VT +VK
Sbjct: 54 PIWNFDGSSTGQAPGEDSEVLLRPAAIYKDPFRKGKHILVLCDCLKPDGTPISNNTRADAARVMKAAASHEPWFGIEQEYTLFEADNVTPYGWPKGGFPGPQGPYYCGAGAHSAYGRMIADAHYRACLYAGINISGINAEVMPGQWEYQVGPCTGIESGDQLWISRYVLLRVCEDFGVNVSWDPKPIPGDWNGAGCHTNYSTKEMREDGGMGKIIEAIEKLKIKHHVHIAAYGQGNERRLTGRHETASIDSFSYGIANRGASVRIPRVAETEGKGYFEDRRPSSNMDPYLVTSRLVK 350
BLAST of mRNA_Ecto-sp8_S_contig10838.1225.1 vs. uniprot
Match: A0A2D4BU85_PYTIN (Glutamine synthetase n=2 Tax=Pythium TaxID=4797 RepID=A0A2D4BU85_PYTIN) HSP 1 Score: 474 bits (1219), Expect = 7.970e-165 Identity = 216/297 (72.73%), Postives = 245/297 (82.49%), Query Frame = 2
Query: 221 PKWNYDGSSTGQAPGEDSEVIIYPQAVYPDPFRGGDNIMVLCDTYEPNGTPLPTNTRKECAAIMEKAKDLVPWFGIEQEYTLFEADGVTPFGWPKSGYPGPQGPYYCSIGYENAFGRHIMEAHYKACLFAGVNISGTNGEVMPGQWEYQVGPCEGITSGDELWISRYLLQRVCEQFGVIVSLDPKPIPGDWNGAGCHTNYSTKPMREEGGYKDIIAAIEKLGEKHDEHIAAYGEGNERRLTGKHETASMDKFSYGVANRGASIRIGRDVEKEQKGYFEDRRPSSNMDPYVVTGMIVK 1111
P WN+DGSSTGQAPGEDSEV++ P A++ DPFRGG NI+VLCD +P+ TP+ NTR +CA +M A PWFGIEQEYTLFEAD TP+GWPK GYPGPQGPYYC G +AFGR I++AHY+ACL+AGV +SG N EVMPGQWEYQVGPCEG+ +GD LWISRY+L RVCE FGV VS DPKPIPGDWNGAGCHTNYST+ MRE+GG II AIEK+ KH HIAAYG+GNERRLTG+HETAS+D FSYGVANRGASIRI R E + KGYFEDRRP+SNMDPYVVT IVK
Sbjct: 54 PIWNFDGSSTGQAPGEDSEVLLRPAAIFKDPFRGGKNILVLCDCLKPDMTPIANNTRVDCARVMAAAASHKPWFGIEQEYTLFEADKTTPYGWPKGGYPGPQGPYYCGAGAHSAFGRLIVDAHYRACLYAGVKVSGINAEVMPGQWEYQVGPCEGMEAGDHLWISRYILLRVCEDFGVNVSWDPKPIPGDWNGAGCHTNYSTQAMREDGGMAVIIEAIEKMKLKHKVHIAAYGQGNERRLTGRHETASIDTFSYGVANRGASIRIPRSAEADGKGYFEDRRPASNMDPYVVTARIVK 350
BLAST of mRNA_Ecto-sp8_S_contig10838.1225.1 vs. uniprot
Match: A0A7S0P9X0_CAFRO (Glutamine synthetase n=3 Tax=Sar TaxID=2698737 RepID=A0A7S0P9X0_CAFRO) HSP 1 Score: 474 bits (1219), Expect = 1.870e-164 Identity = 214/295 (72.54%), Postives = 239/295 (81.02%), Query Frame = 2
Query: 221 PKWNYDGSSTGQAPGEDSEVIIYPQAVYPDPFRGGDNIMVLCDTYEPNGTPLPTNTRKECAAIMEKAKDLVPWFGIEQEYTLFEADGVTPFGWPKSGYPGPQGPYYCSIGYENAFGRHIMEAHYKACLFAGVNISGTNGEVMPGQWEYQVGPCEGITSGDELWISRYLLQRVCEQFGVIVSLDPKPIPGDWNGAGCHTNYSTKPMREEGGYKDIIAAIEKLGEKHDEHIAAYGEGNERRLTGKHETASMDKFSYGVANRGASIRIGRDVEKEQKGYFEDRRPSSNMDPYVVTGMI 1105
P+WN+DGSST QA G DSEVI+ P + PDPFRGG++I+VLC+ Y P+GT PTNTR AA K + PWFG+EQEYTLFEADG TP GWPK GYPGPQGPYYCS G ENAFGR I +AHY+ACLFAG+ +SG N EVMPGQWEYQVGPC GI SGD +W+SRY++QRVCE FGV+ S DPKPIPGDWNGAGCH NYSTKPMRE GGY II AIEKLG KH EH+A YG GNERRLTG HETA +DKFSYGVANRGAS+RI R E + GYFEDRRP+SNMDPYVVT I
Sbjct: 80 PEWNFDGSSTKQAEGHDSEVILKPVRIVPDPFRGGEHILVLCECYRPDGTAHPTNTRAPAAAAFAKDEASAPWFGVEQEYTLFEADGRTPLGWPKGGYPGPQGPYYCSAGAENAFGRAIADAHYRACLFAGIKVSGINAEVMPGQWEYQVGPCLGIESGDHMWLSRYIMQRVCEDFGVVCSFDPKPIPGDWNGAGCHVNYSTKPMREAGGYAAIIEAIEKLGAKHLEHMAVYGRGNERRLTGAHETAPIDKFSYGVANRGASVRIPRTTEADDCGYFEDRRPASNMDPYVVTAKI 374
BLAST of mRNA_Ecto-sp8_S_contig10838.1225.1 vs. uniprot
Match: C7F8H7_9ROSI (Glutamine synthetase (Fragment) n=4 Tax=rosids TaxID=71275 RepID=C7F8H7_9ROSI) HSP 1 Score: 470 bits (1209), Expect = 6.090e-164 Identity = 211/299 (70.57%), Postives = 247/299 (82.61%), Query Frame = 2
Query: 221 PKWNYDGSSTGQAPGEDSEVIIYPQAVYPDPFRGGDNIMVLCDTYEPNGTPLPTNTRKECAAIM--EKAKDLVPWFGIEQEYTLFEADGVTPFGWPKSGYPGPQGPYYCSIGYENAFGRHIMEAHYKACLFAGVNISGTNGEVMPGQWEYQVGPCEGITSGDELWISRYLLQRVCEQFGVIVSLDPKPIPGDWNGAGCHTNYSTKPMREEGGYKDIIAAIEKLGEKHDEHIAAYGEGNERRLTGKHETASMDKFSYGVANRGASIRIGRDVEKEQKGYFEDRRPSSNMDPYVVTGMIVK 1111
PKWNYDGSSTGQAPGEDSEVI+YPQA++ DPFRGG+NI+V+CDTY P G P+PTN R A I EK D VPWFGIEQEYTL + + P GWP GYPGPQGPYYC G + +FGR I +AHYKAC++AG+NISGTNGEVMPGQWEYQVGP GI +GD +WISRY+L+R+ EQ GV++SLDPKPI GDWNGAGCHTNYSTK MREEGG++ I AI L +H EHI+AYGEGNERRLTGKHETAS+D FS+GVANRG SIR+GR+ EK+ KGY EDRRP+SNMDPY+VT ++ +
Sbjct: 18 PKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRGGNNILVMCDTYTPQGEPIPTNKRHRAAEIFSNEKVIDEVPWFGIEQEYTLLQTNVKWPLGWPVGGYPGPQGPYYCGAGADKSFGRDISDAHYKACMYAGINISGTNGEVMPGQWEYQVGPSVGIDAGDHIWISRYILERITEQAGVVLSLDPKPIEGDWNGAGCHTNYSTKTMREEGGFEAIKKAILNLPLRHKEHISAYGEGNERRLTGKHETASIDTFSWGVANRGCSIRVGRETEKQGKGYLEDRRPASNMDPYIVTSLLAE 316 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig10838.1225.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig10838.1225.1 >prot_Ecto-sp8_S_contig10838.1225.1 ID=prot_Ecto-sp8_S_contig10838.1225.1|Name=mRNA_Ecto-sp8_S_contig10838.1225.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=259bp MVLCDTYEPNGTPLPTNTRKECAAIMEKAKDLVPWFGIEQEYTLFEADGVback to top mRNA from alignment at Ecto-sp8_S_contig10838:3696..6566+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig10838.1225.1 ID=mRNA_Ecto-sp8_S_contig10838.1225.1|Name=mRNA_Ecto-sp8_S_contig10838.1225.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=2871bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10838:3696..6566+ (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig10838:3696..6566+ >mRNA_Ecto-sp8_S_contig10838.1225.1 ID=mRNA_Ecto-sp8_S_contig10838.1225.1|Name=mRNA_Ecto-sp8_S_contig10838.1225.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=777bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10838:3696..6566+ (Ectocarpus species8 EcLAC_412)back to top |