mRNA_Ecto-sp8_S_contig10825.1214.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig10825.1214.1 vs. uniprot
Match: D8LL71_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL71_ECTSI) HSP 1 Score: 194 bits (493), Expect = 3.350e-60 Identity = 102/103 (99.03%), Postives = 102/103 (99.03%), Query Frame = 1
Query: 7 MDSAKFFKLMGDSGLTGKSLTRTDCDLIFTKTCSSSGCVKKIHYDAFRKFAIANLAAKLGVDESAVMSKIASVTGVSSSGTVAQASRFHDDKSTYTGSHAAGG 315
MDSAKFFKLMGDSGLTGKSLTRTDCDLIFTKTCSSSGCVKKIHYDAFRKFAIANLAAKLG DESAVMSKIASVTGVSSSGTVAQASRFHDDKSTYTGSHAAGG
Sbjct: 1 MDSAKFFKLMGDSGLTGKSLTRTDCDLIFTKTCSSSGCVKKIHYDAFRKFAIANLAAKLGADESAVMSKIASVTGVSSSGTVAQASRFHDDKSTYTGSHAAGG 103
BLAST of mRNA_Ecto-sp8_S_contig10825.1214.1 vs. uniprot
Match: A0A6H5L356_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L356_9PHAE) HSP 1 Score: 198 bits (504), Expect = 6.370e-59 Identity = 104/105 (99.05%), Postives = 104/105 (99.05%), Query Frame = 1
Query: 1 GDMDSAKFFKLMGDSGLTGKSLTRTDCDLIFTKTCSSSGCVKKIHYDAFRKFAIANLAAKLGVDESAVMSKIASVTGVSSSGTVAQASRFHDDKSTYTGSHAAGG 315
GDMDSAKFFKLMGDSGLTGKSLTRTDCDLIFTKTCSSSGCVKKIHYDAFRKFAIANLAAKLG DESAVMSKIASVTGVSSSGTVAQASRFHDDKSTYTGSHAAGG
Sbjct: 269 GDMDSAKFFKLMGDSGLTGKSLTRTDCDLIFTKTCSSSGCVKKIHYDAFRKFAIANLAAKLGADESAVMSKIASVTGVSSSGTVAQASRFHDDKSTYTGSHAAGG 373
BLAST of mRNA_Ecto-sp8_S_contig10825.1214.1 vs. uniprot
Match: A0A835YWX0_9STRA (p25-alpha-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWX0_9STRA) HSP 1 Score: 84.7 bits (208), Expect = 1.920e-17 Identity = 50/104 (48.08%), Postives = 67/104 (64.42%), Query Frame = 1
Query: 4 DMDSAKFFKLMGDSGLTGKSLTRTDCDLIFTKTCSSSGCVKKIHYDAFRKFAIANLAAKLGVDESAVMSKIASVTGVSSSGTVAQASRFHDDKSTYTGSHAAGG 315
++DSA+FFKL D+ L RT CDL+FT+ + K++ + AFR AI +A V E +V++ IASV VSS+GTV A RFHDDK+TYTG+H GG
Sbjct: 29 ELDSARFFKLCTDARLIDARFGRTQCDLVFTRAATQ----KRLGWAAFRAQAIPYVADGKNVSEESVLAAIASVQCVSSTGTVPDAVRFHDDKTTYTGTHGVGG 128
BLAST of mRNA_Ecto-sp8_S_contig10825.1214.1 vs. uniprot
Match: Q244Y1_TETTS (Tubulin polymerization-promoting family protein n=2 Tax=Tetrahymena thermophila TaxID=5911 RepID=Q244Y1_TETTS) HSP 1 Score: 71.6 bits (174), Expect = 1.310e-13 Identity = 47/104 (45.19%), Postives = 59/104 (56.73%), Query Frame = 1
Query: 4 DMDSAKFFKLMGDSGLTGKSLTRTDCDLIFTKTCSSSGCVKKIHYDAFRKFAIANLAAKLGVDESAVMSKIASVTGVSSSGTVAQASRFHDDKSTYTGSHAAGG 315
DMD F K D GL K LT TD DLIF K +SS V+ I + F K + +A K G+ A+ K+ S G + +GT A A +FHDDKS YTG +A GG
Sbjct: 18 DMDGKTFAKFAKDCGLLDKKLTATDIDLIFAKVKTSSA-VRTITFAQFEK-GLDQMATKKGISLDALKEKVTSAGGPTFTGTKADAVKFHDDKSLYTGVYANGG 119
BLAST of mRNA_Ecto-sp8_S_contig10825.1214.1 vs. uniprot
Match: Q244Y3_TETTS (Tubulin polymerization-promoting family protein n=1 Tax=Tetrahymena thermophila (strain SB210) TaxID=312017 RepID=Q244Y3_TETTS) HSP 1 Score: 69.7 bits (169), Expect = 7.340e-13 Identity = 47/104 (45.19%), Postives = 58/104 (55.77%), Query Frame = 1
Query: 4 DMDSAKFFKLMGDSGLTGKSLTRTDCDLIFTKTCSSSGCVKKIHYDAFRKFAIANLAAKLGVDESAVMSKIASVTGVSSSGTVAQASRFHDDKSTYTGSHAAGG 315
+MD F K D+GL K LT TD DLIF K SS ++ I+ F + I AAK G+ + K+ + G S SGT A A RFHDDKS YTG +A GG
Sbjct: 18 EMDGKTFAKFAKDTGLLDKKLTATDVDLIFAKVKGSSA-IRCINIRQFEE-GINQFAAKKGISAQDLREKVTASNGPSYSGTKADAVRFHDDKSLYTGVYANGG 119
BLAST of mRNA_Ecto-sp8_S_contig10825.1214.1 vs. uniprot
Match: A0A699YJU1_HAELA (Flagellar associated protein (Fragment) n=1 Tax=Haematococcus lacustris TaxID=44745 RepID=A0A699YJU1_HAELA) HSP 1 Score: 68.9 bits (167), Expect = 1.730e-12 Identity = 45/106 (42.45%), Postives = 67/106 (63.21%), Query Frame = 1
Query: 4 DMDSAKFFKLMGDSGLTGKSLTRTDCDLIFTKTCSSSGCVKKIHYDAFRKFAIANLAAKLGVDESAVMSKIASVTGVSS--SGTVAQASRFHDDKSTYTGSHAAGG 315
+M+S F+KL D+G+ K LT+TDCDLIFTK + +KI+Y F+ A+ ++A K + +V A++ G + + T AQA++FHDDKS YTG +A GG
Sbjct: 24 EMESKNFYKLFKDAGMIDKVLTQTDCDLIFTKVKTKGA--RKINYSEFQT-ALEHIAGK---KKCSVDDVTATICGAEAKINATTAQATKFHDDKSLYTGVYANGG 123
BLAST of mRNA_Ecto-sp8_S_contig10825.1214.1 vs. uniprot
Match: A0A383WLB3_TETOB (Uncharacterized protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383WLB3_TETOB) HSP 1 Score: 68.2 bits (165), Expect = 5.000e-12 Identity = 45/104 (43.27%), Postives = 60/104 (57.69%), Query Frame = 1
Query: 4 DMDSAKFFKLMGDSGLTGKSLTRTDCDLIFTKTCSSSGCVKKIHYDAFRKFAIANLAAKLGVDESAVMSKIASVTGVSSSGTVAQASRFHDDKSTYTGSHAAGG 315
+++ F KL D+ L GK+LT TD DLIF K + C KI + F K + ++AAK G V++ I G +GT A+A RFHDDKS YTG +A GG
Sbjct: 30 ELEGKNFIKLAKDTKLLGKALTTTDIDLIFAKVKAKGAC--KITWPEFVK-GLDHIAAKKGCAVDEVVATIIKSGGPQDNGTKAEACRFHDDKSQYTGVYARGG 130
BLAST of mRNA_Ecto-sp8_S_contig10825.1214.1 vs. uniprot
Match: A0A2P6VCP5_9CHLO (Flagellar associated n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VCP5_9CHLO) HSP 1 Score: 70.5 bits (171), Expect = 5.860e-12 Identity = 43/103 (41.75%), Postives = 67/103 (65.05%), Query Frame = 1
Query: 4 DMDSAKFFKLMGDSGLTGKSLTRTDCDLIFTKTCSSSGCVKKIHYDAFRKFAIANLAAKLGVDESAVMSKIASVTGVSSSG-TVAQASRFHDDKSTYTGSHAA 309
++D A+F KL ++GL GK+L+ TDCD++F K S +KI ++ F + LA+K G D A+++++ + G ++G T A+A RFHDD S+YTG HAA
Sbjct: 120 ELDGARFIKLCKETGLVGKALSTTDCDIMFAKCKERSA--RKITFEQFVD-CVGLLASKTGGDLDALIARLGAAGGPCANGVTAAEAVRFHDDVSSYTGVHAA 219
BLAST of mRNA_Ecto-sp8_S_contig10825.1214.1 vs. uniprot
Match: H9B967_EIMTE (p25-alpha domain-containing protein, putative n=2 Tax=Eimeria TaxID=5800 RepID=H9B967_EIMTE) HSP 1 Score: 67.0 bits (162), Expect = 1.080e-11 Identity = 45/104 (43.27%), Postives = 60/104 (57.69%), Query Frame = 1
Query: 4 DMDSAKFFKLMGDSGLTGKSLTRTDCDLIFTKTCSSSGCVKKIHYDAFRKFAIANLAAKLGVDESAVMSKIASVTGVSSSGTVAQASRFHDDKSTYTGSHAAGG 315
D+DS F KL D L G LT+TDCDLIFTK C + G + + + F A+ +AAK ++ ++ G GT A+A RF+DDKST+TG HA GG
Sbjct: 16 DLDSRTFVKLCKDCKLLGGGLTQTDCDLIFTK-CKAKGAAR-LTFSEFEA-AMEAVAAKKKCSLEELLQQVGPGGGPQFRGTAAEAVRFYDDKSTFTGVHAHGG 116
BLAST of mRNA_Ecto-sp8_S_contig10825.1214.1 vs. uniprot
Match: A0A077TVG4_PLACH (p25-alpha family protein, putative n=12 Tax=Plasmodium (Vinckeia) TaxID=418101 RepID=A0A077TVG4_PLACH) HSP 1 Score: 66.6 bits (161), Expect = 1.220e-11 Identity = 46/106 (43.40%), Postives = 59/106 (55.66%), Query Frame = 1
Query: 4 DMDSAKFFKLMGDSGLTGKSLTRTDCDLIFTKTCSSSGCVKKIHYDAFRKFAIANLAAKLGVDESAVMSKIASVT--GVSSSGTVAQASRFHDDKSTYTGSHAAGG 315
DMDS F K++ DS L K +T D DL F K + K+I YD F + AI +L K +D + K+ + G GT A+A+RFHDDKSTYTG H GG
Sbjct: 14 DMDSRTFVKILKDSKLLSKKITAVDADLAFAKVKTKGS--KRIKYDQFVE-AIKHLTEKYKLDYDQFVGKLCNEASNGPILYGTKAEATRFHDDKSTYTGVHKLGG 116 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig10825.1214.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig10825.1214.1 >prot_Ecto-sp8_S_contig10825.1214.1 ID=prot_Ecto-sp8_S_contig10825.1214.1|Name=mRNA_Ecto-sp8_S_contig10825.1214.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=103bp MDSAKFFKLMGDSGLTGKSLTRTDCDLIFTKTCSSSGCVKKIHYDAFRKFback to top mRNA from alignment at Ecto-sp8_S_contig10825:628..1822- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig10825.1214.1 ID=mRNA_Ecto-sp8_S_contig10825.1214.1|Name=mRNA_Ecto-sp8_S_contig10825.1214.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=1195bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10825:628..1822- (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig10825:628..1822- >mRNA_Ecto-sp8_S_contig10825.1214.1 ID=mRNA_Ecto-sp8_S_contig10825.1214.1|Name=mRNA_Ecto-sp8_S_contig10825.1214.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=309bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10825:628..1822- (Ectocarpus species8 EcLAC_412)back to top |