mRNA_Ecto-sp8_S_contig1082.1206.1 (mRNA) Ectocarpus species8 EcLAC_412
|
Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig1082.1206.1 vs. uniprot
Match: D7G700_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G700_ECTSI) HSP 1 Score: 2011 bits (5210), Expect = 0.000e+0 Identity = 1053/1098 (95.90%), Postives = 1058/1098 (96.36%), Query Frame = 1
Query: 121 MNDEAKVLFDMFPDTPHQTLTTIWRNCGEDFSTALDEALTVASLGNADEQARFDGGDFAAIEAPVDYWEDAPALLPALGERRFVPDTSAGPVSSSTAHDTAPETRRPSANGGGVTYADAASAMSPRENGLPKLPWEGKEKRYVIGSGELGLLNELQMPRRGAVVPLPVDFLRVPVGSSQPSTPPAPAAEPLIVLDPDGRSTELNQVPSPTLVSVRGSTVWDGERGRGDPASSSPGASFGGRQFRSPAKNTLPVRASPTLLRNVGENQPTVESADAKPQMKVVGGDRNGGVRVGDSPGKEAWAIGSSGQRKKPVPTALRGEPSPA-SRRTDSRPPARGGSAWGAGAGSNAQKVETASAAERIASFRPGTRFRVAVDKGVTGLGITVKEIRGRFFVYKLQHLADGSQGAAEEAGVKAGDQLLGVEELDFETERWDMDQLVSYMGELMGVVILHVMRGFGPLPQAPKSDFENGMSYGVARSNEEDCAADGSAGTDGGNESGVSTVQRRARRLVEVLEEEDLSKPSEAADISRLYCQINDRARQWDTGELWLSVNDMARRPSRDTLAVMANQWHPDPPPGWDESDSSEGRSLPNSSGAQRAERSSSDISDDSLGSDPAATKRNGFGAQDGDEPGTDLDTIGAALLGQPLFSDPLMEGRVDEAAAXXXXXXXLADGXXXGSGHYWSPWPQLVALESKAAQRTTVVPTQGLRKALNVRILEQPXXXXXXXXXXXXXXGKGGRSSAPQTVSYLVWVMDVESGAEWRVRRCHPEFSELWEVCTGMRPSLARLDFPPWLPDVKETAGVVDARRPRLEAYLQRLCSLLYMGPLHPSSAHLAHLLQDFLGTSPRVETLGRLQRSRPERELRQALQVRAWQMFRLPPLERAVADFVREICDSPASRSKKTVPAEAVLKRLTDVIEHLQYVVTEGCFNELREMVRSSSVVTASAGRGHSSGRGSEGGEGGGNDHPELASLAEEDEALDLISGSVRRQVEAEVFVPVMGRIYKKLLSEGATARLEKAVVLGVEEARGKPQTYHGVPTSNISPSGWSSSMRLLQTVGLFTLPCDKLDALMAVAHDIPALHRVEHPGDNASSLGADDFLPIFIY 3411
MNDEAKVLFDMFPDTPHQTL TIWRNCGEDFSTALDEALTVASLGNADEQARFDGGDFAAIEAPVDYWEDAPALLPALGERRF P+TSAGPVSSS AHDTAPETRRPSANGGGVTYADAASAMSPRENGLPKLPWEGKEKRYVIGSGELGLLNELQMPRRGAVVPLPVDFLRVPVGSSQPSTPPAPAAEPLIVLDPDGRS+E NQVPSPTL SVRGS VWDGERGRGDPASSSPGASFGGRQF SPAKNT VRASPTLLRNVGENQPTVES DAKPQMKVVGGDRNGG RVGDSPGKEAWAIGSSGQRKKPVPTALRGEP PA SRRTDSRPPARGGSAWGAGAG NAQKVETASAAERIA+FRPGTRFRVAVDKGVTGLGITVKEIRGRFFVYKLQHLADGSQGAAEEAGVKAGDQLLGVEELDFETERWDMDQLVSYMGELMGVVILHVMRGFGPLPQAPKSDFENGMSYGVARSNEED AADGSAGTDGGNESG STVQRRARRLVEVLEEEDLSKPSEAADISRLYCQINDRARQWDTGELWLSVNDMARRPSRDTLAVMANQWHPDPPPGWDESDSSEGRSLPNSSGAQRAERSSSDISDDSL DPAATKR+G GAQDGDEPGTDLDTIGAALLGQPLFSDPLMEGRVDEA A LADG G GHYWSPWPQLVALESKAAQRTTVVPTQGLRKALNVRILEQP XXXXXXXXXXX GKGGRSSAPQT SYLVWVMDVESGAEWRVRRCHPEFSELWEVCTGMRPSLARLDFPPWLPDVKETAGVVDARRPRLEAYLQRLCSLLYMGPLHPSSAHLAHLLQDFLGTSPRVETLGRLQRSRPERELRQALQVRAWQMFRLPPLERAVADFVREICDSPASRSKKTVPAEAVLKRLTDVIEHLQYVVTEGCFNELREMVRSSS VT SAGRGHSSGRGSE EGGGNDHPELASLAEEDEALDLISGSVRRQVEAEVFVPVMGRIYKKL +EGATARLEKAVVLGVEEARGKPQTYHGVPTSNISPSGWSSSMRLLQTVGLFTLPCDKLDALMAVAHDIPALHRVEHPGDNASSLGADDFLPIFIY
Sbjct: 1 MNDEAKVLFDMFPDTPHQTLATIWRNCGEDFSTALDEALTVASLGNADEQARFDGGDFAAIEAPVDYWEDAPALLPALGERRFAPETSAGPVSSSRAHDTAPETRRPSANGGGVTYADAASAMSPRENGLPKLPWEGKEKRYVIGSGELGLLNELQMPRRGAVVPLPVDFLRVPVGSSQPSTPPAPAAEPLIVLDPDGRSSEPNQVPSPTLASVRGSVVWDGERGRGDPASSSPGASFGGRQFGSPAKNTPSVRASPTLLRNVGENQPTVESTDAKPQMKVVGGDRNGGERVGDSPGKEAWAIGSSGQRKKPVPTALRGEPIPANSRRTDSRPPARGGSAWGAGAGGNAQKVETASAAERIANFRPGTRFRVAVDKGVTGLGITVKEIRGRFFVYKLQHLADGSQGAAEEAGVKAGDQLLGVEELDFETERWDMDQLVSYMGELMGVVILHVMRGFGPLPQAPKSDFENGMSYGVARSNEEDGAADGSAGTDGGNESGASTVQRRARRLVEVLEEEDLSKPSEAADISRLYCQINDRARQWDTGELWLSVNDMARRPSRDTLAVMANQWHPDPPPGWDESDSSEGRSLPNSSGAQRAERSSSDISDDSLVPDPAATKRDGVGAQDGDEPGTDLDTIGAALLGQPLFSDPLMEGRVDEAGAAAAARSSLADGDDEGGGHYWSPWPQLVALESKAAQRTTVVPTQGLRKALNVRILEQPPXXXXXXXXXXXD-GKGGRSSAPQTASYLVWVMDVESGAEWRVRRCHPEFSELWEVCTGMRPSLARLDFPPWLPDVKETAGVVDARRPRLEAYLQRLCSLLYMGPLHPSSAHLAHLLQDFLGTSPRVETLGRLQRSRPERELRQALQVRAWQMFRLPPLERAVADFVREICDSPASRSKKTVPAEAVLKRLTDVIEHLQYVVTEGCFNELREMVRSSSAVTTSAGRGHSSGRGSEXXEGGGNDHPELASLAEEDEALDLISGSVRRQVEAEVFVPVMGRIYKKL-TEGATARLEKAVVLGVEEARGKPQTYHGVPTSNISPSGWSSSMRLLQTVGLFTLPCDKLDALMAVAHDIPALHRVEHPGDNASSLGADDFLPIFIY 1096
BLAST of mRNA_Ecto-sp8_S_contig1082.1206.1 vs. uniprot
Match: A0A6H5KQH5_9PHAE (PDZ domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQH5_9PHAE) HSP 1 Score: 1329 bits (3440), Expect = 0.000e+0 Identity = 706/784 (90.05%), Postives = 721/784 (91.96%), Query Frame = 1
Query: 121 MNDEAKVLFDMFPDTPHQTLTTIWRNCGEDFSTALDEALTVASLGNADEQARFDGGDFAAIEAPVDYWEDAPALLPALGERRFVPDTSAGPVSSSTAHDTAPETRRPSANGGGVTYADAASAMSPRENGLPKLPWEGKEKRYVIGSGELGLLNELQMPRRGAVVPLPVDFLRVPVGSSQPSTPPAPAAEPLIVLDPDGRSTELNQVPSPTLVSVRGSTVWDGERGRGDPASSSPGASFGGRQFRSPAKNTLPVRASPTLLRNVGENQPTVESADAKPQMKVVGGDRNGGVRVGDSPGKEAWAIGSSGQRKKPVPTALRGEPSPASRRTDSRPPARGGSAWGAGAGSNAQKVETASAAERIASFRPGTRFRVAVDKGVTGLGITVKEIRGRFFVYKLQHLADGSQGAAEEAGVKAGDQLLGVEELDFETERWDMDQLVSYMGELMGVVILHVMRGFGPLPQAPKSDFENGMSYGVARSNEEDCAADGSAGTDGGNESGVSTVQRRARRLVEVLEEEDLSKPSEAADISRLYCQINDRARQWDTGELWLSVNDMARRPSRDTLAVMANQWHPDPPPGWDESDSSEGRSLPNSSGAQRAERSSSDISDDSLGSDPAATKRNGFGAQDGDEPGTDLDTIGAALLGQPLFSDPLMEGRVDEAAAXXXXXXXLADGXXXGSGHYWSPWPQLVALESKAAQRTTVVPTQGLRKALNVRILEQPXXXXXXXXXXXXXX--GKGGRSSAPQTVSYLVWVMDVESGAEWRVRRCHPEFSELWEVCTGMRPSLAR 2466
MNDEAKVLFDMFPDTPHQTL TIWRNCGEDFSTALDEALTVASLGNADEQARFDGGDFAAIEAP DYWEDAPALLPALGERRFV +TS GPVSSS AHDTAPETRRPSANGG VTYADAASAMSP+ENGLPKLPWEGKE+RYVIGSGELGLLNELQMPRRGA+VPLPV FLRVP G SQPSTPPA AAEPLIVLDPDGRS+E NQV SPTL SVRGSTVWD ERGRG+PASSSPGASFGGRQFRSP KNT PVRASPTLLRNVGE+QPTVESA+AK QMKVVGGDRNGGVRVGD+PGKEAWAI SSGQRKKPVPT LRGEPSPASR+ D RPP RGGSAWGAGAGSN QKVETASAAERIA+FRPGTRFRVAVDKGVTGLGITVKEIRGRFFVYKLQ LADGSQGAAEEAGVKAGDQLLGVEELDFETERWDMDQLVSYMGELMGVVILHVMRGFGPLPQAPKSD ENGMSYGVARSNE D AADG GVSTVQRRARRLVEVLEEE LSK SEAADISRLYCQI+DRA+QWDTGELWLSVNDMARRPSRDTLAVMANQWHPDPPPGWDE DSSEGRSLPNSSGAQRAERSSSDISDD L DPAATKR+GFG QDGDEPG DLDTIGAALLGQPLFSDPLMEGRVDEA A +A G G GHYWSPWPQLVALESKAAQRTTVVPTQGLRKALNVRILEQPXXXXXXXXXXXXX KGGRSSAPQTVSYLVWVMDVESGAEWRVRR HPEFSELWEVCTGMRPSLAR
Sbjct: 1 MNDEAKVLFDMFPDTPHQTLATIWRNCGEDFSTALDEALTVASLGNADEQARFDGGDFAAIEAPADYWEDAPALLPALGERRFVAETSTGPVSSSRAHDTAPETRRPSANGG-VTYADAASAMSPKENGLPKLPWEGKEERYVIGSGELGLLNELQMPRRGAIVPLPVGFLRVPGGFSQPSTPPATAAEPLIVLDPDGRSSEPNQVSSPTLASVRGSTVWDSERGRGNPASSSPGASFGGRQFRSPVKNTPPVRASPTLLRNVGEHQPTVESANAKAQMKVVGGDRNGGVRVGDNPGKEAWAIRSSGQRKKPVPTTLRGEPSPASRKADFRPPVRGGSAWGAGAGSNNQKVETASAAERIANFRPGTRFRVAVDKGVTGLGITVKEIRGRFFVYKLQSLADGSQGAAEEAGVKAGDQLLGVEELDFETERWDMDQLVSYMGELMGVVILHVMRGFGPLPQAPKSDLENGMSYGVARSNEGDGAADGXXXXXXXXXGGVSTVQRRARRLVEVLEEEGLSKTSEAADISRLYCQIDDRAKQWDTGELWLSVNDMARRPSRDTLAVMANQWHPDPPPGWDELDSSEGRSLPNSSGAQRAERSSSDISDDPLVPDPAATKRDGFGGQDGDEPGIDLDTIGAALLGQPLFSDPLMEGRVDEAGAAAGARSSVAGGDDEGGGHYWSPWPQLVALESKAAQRTTVVPTQGLRKALNVRILEQPXXXXXXXXXXXXXSDDAKGGRSSAPQTVSYLVWVMDVESGAEWRVRRRHPEFSELWEVCTGMRPSLAR 783
BLAST of mRNA_Ecto-sp8_S_contig1082.1206.1 vs. uniprot
Match: A0A7S3NP42_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NP42_9STRA) HSP 1 Score: 232 bits (592), Expect = 2.990e-60 Identity = 224/762 (29.40%), Postives = 344/762 (45.14%), Query Frame = 1
Query: 1192 ERIASFRPGTRFRVAVDKGVT------GLGITVK-EIRGRFFVYKLQHLADGSQGAAEEAGVKAGDQLLGVEELDFETERWDMDQLVSYMGELM--GVVILHVMRGFGPLPQAPKSDFENGMSYGVARSNEEDCAADGSAGTDGGNESGVSTVQRRARRLVEVLEEEDLSKPSEAADISRLYCQINDRARQWDTGELWLSVNDMARRPSRDTLAVMANQWHPDPPPGWDESDSSEGRSLPNSSGAQRAERSSSDISDDSLGSDPAATKRNGFGAQDGDEP-------GTDLDTIGAALLGQPLFSDPLMEGRVDEAAAXXXXXXXLADGXXXGSGHYWSPWPQLVALESKAAQRTTVVPTQGLRKALNVRILEQPXXXXXXXXXXXXXXGKGGRSSAPQTVSYLVWVMDVESGAEWRVRRCHPEFSELWEVCTGMRPSLARLDFPPWLPDVKETAGVVDARRPRLEAYLQRLCSLLYMGPLHPSSAHLAHLLQDFLGTSPRVETLGRLQRSRPERELRQALQVRAWQMFRLPPLERAVADFVREICDSPASRSKKTVPAEAVLKRLTDVIEHLQYVVTEGCFNELREM----VRSSSVVTASAGRGHSSGRGSEGGEGGGNDHPELASLAEEDEALDLISGSVRRQVEAEVFVPVMGRIYKKLLS--EGATARLEKAVVLGVEEARGKPQTYHGVPTSNISPSGWSSSMRLLQTVGLFTLPCDKLDALMAVAHDIPALHRVEHPGDNASSLGADDFLPIFIY 3411
E++ + G FR + + T GLGITVK GR V+ L G AE AG+K GDQ+LGV F ++ + LV+ + E +IL + RG G + K N NE+D T + + ++L+++ + +AA +S + Q+ R +WD L+ + M+ L+ G+ +S SS + +R S SDIS D + + G DE + ++ G +L FS + A L + +P P ++A K A LR AL VRIL G Y++WV+DV +GAEWRV+R EF EL E +RPS+ +LDFP P + ET V+ RR RLE Y++R+ +L LHP S+ +A +LQ FL R +L L+R+ P+ LRQA QV Q+ LP L++ ++D V +++S +A+L+++ I+HLQ + +G + L+ + V S+++ DE +S +VRRQ+E +++VP+M +++ L + E L++ + AR +PQT++G+P +ISPS W S++ L +G +TLPCDKLDAL+A A +IPAL+RVEHPG + + LGADDFLPIFIY
Sbjct: 107 EKVLAVHQGALFRARLKRSRTSGSRASGLGITVKCTADGRIVVHALPRPDPEIWGLAEAAGIKVGDQVLGVGATYF-PQKSTLATLVARVKEEPPENDIILILKRGLG---KKKKQKINNHSLI-----NEQD------------------TSPNKLCHMAKILQDQGVVDQVQAAVLSTMMAQLERRLARWDKSGDLLAGSPMS-------LSFR----------GYSDSSSST-KHAKIKQNFRRTISSESDISRDDFHDESMS------GILSDDESHINEKQHSPNYESWGKSLGSVHTFSSSGSFSQQTTYFATTPTTHILNTSTSVEAAS--TPRPTVIANAKKEAL---------LRPALCVRIL--------------------GTDYVEDHTVYILWVLDVLAGAEWRVQRRFREFFELHEELIKLRPSIDKLDFPTRRPSIYETVHTVNDRRVRLERYIRRVAGMLTSSRLHPRSSDVARVLQRFLDVPKRRASLELLERN-PDITLRQACQVATAQVLSLPVLDKLLSDVVS------STQSHDFESGDAMLQKMKQYIDHLQAAILDGSHDLLKSVALRRVPSNALPI--------------------------------DELNTTLSAAVRRQIETDIYVPLMEKVHDLLSTDIESEEFALQRKCI----RARSRPQTFYGIPIQHISPSSWESAIYQLANIGAYTLPCDKLDALLAAAKEIPALYRVEHPGTD-THLGADDFLPIFIY 742
BLAST of mRNA_Ecto-sp8_S_contig1082.1206.1 vs. uniprot
Match: A0A7S2G0S3_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G0S3_9STRA) HSP 1 Score: 202 bits (515), Expect = 3.310e-53 Identity = 141/411 (34.31%), Postives = 215/411 (52.31%), Query Frame = 1
Query: 2215 VPTQGLRKALNVRILEQPXXXXXXXXXXXXXXGKGGRSSAPQTVSYLVWVMDVESGAEWRVRRCHPEFSELWEVCTGMRPSLARLDFPPWLPDVKETAGVVDARRPRLEAYLQRLCSLLYMGPLHPSSAHLAHLLQDFLGTSPRVETLGRLQRSRPERELRQALQVRAWQMFRLPPLERAVADFVREICDSPASRSKKTVPAEA---VLKRLTDVIEHLQYVVTEGCF---------NELREMVRSSSVVTASAGRGHSSGRGSEGGEGGGNDHPELASLAEEDEALDLISGSVRRQVEAEVFVPVMGRIYKKLLSEGATARLEKAVVLGVEEARGKPQTYHGVPTSNISPSGWSSSMRLLQTVGLFTLPCDKLDALMAVAHDIPALHRVEHPGDNASSLGADDFLPIFIY 3411
VPT GLR AL +R++ Y+VW+ DV+SGAEW R +F L V +RPSL L+FP P + +T V RR +LE +L+++ SLL+ LHP+S +A ++DFLG + R ++L +L + LRQ++QV ++ LP LE +A+F+ ++ +TV E+ +L+ + I HLQ + EGC N L R SS S H + E+ S +E + +I+ +VRRQVE+++FVP+ G++Y+ LL + + E+ + + R KPQT+ G+P +ISPS W S +++L T+ TLP DKL+AL+AV+ +IP L+ +EH + LGAD FLPIFIY
Sbjct: 7 VPTSGLRPALCIRVIACDYNDYH--------------------TQYVVWIQDVQSGAEWHCSRRFRDFRHLRAVVNSLRPSLDHLEFPMQRP-LYDTMATVTTRRYKLEQWLRQIGSLLFSAHLHPASLQIAQHIEDFLGVASRQDSL-KLLTVKHRHRLRQSVQVHVFRALSLPILESVLANFITQL---------RTVALESGTEMLQLMKQFINHLQQCIVEGCGASLHKCLHRNRLLLKARLSSTAPQSDHHEHDYSYA----------YSEIHSDTKEPDDR-IIAAAVRRQVESDIFVPLTGKLYE-LLGDTLDDQ-ERLLQDNIRAVRVKPQTFFGIPVDHISPSSWGSVVKMLSTMNSHTLPYDKLEALLAVSKEIPQLYSLEHADAKPAHLGADAFLPIFIY 373
BLAST of mRNA_Ecto-sp8_S_contig1082.1206.1 vs. uniprot
Match: F0XY90_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XY90_AURAN) HSP 1 Score: 213 bits (543), Expect = 2.180e-52 Identity = 148/400 (37.00%), Postives = 202/400 (50.50%), Query Frame = 1
Query: 2215 VPTQGLRKALNVRILEQPXXXXXXXXXXXXXXGKGGRSSAPQTVSYLVWVMDVESGAEWRVRRCHPEFSELWEVCTGMRPSLARLDFPPWLPDVKETAGVVDARRPRLEAYLQRLCSLLYMGPLHPSSAHLAHLLQDFLGTSPRVETLGRLQRSRPERELRQALQVRAWQMFRLPPLERAVADFVREICDSPASRSKKTVPAEAVLKRLTDVIEHLQYVVTEGCFNELREM-VRSSSVVTASAGRGHSSGRGSEGGEGGGNDHPELASLAEEDEALDLISGSVRRQVEAEVFVPVMGRIYKKLLSEGATARLEKAVVLGVEEARGKPQTYHGVPTSNISPSGWSSSMRLLQTVGLFTLPCDKLDALMAVAHDIPALHRVEHPGDNASSLGADDFLPIFIY 3411
V T LR AL VRIL G A Y++WV+DV +GAEWRV R EF EL E +RPS +LDFP P + ET V+ RR RLE Y +R+ +L+ LH S +A LQ FL R +L L+R+ P+ LRQA QV Q+ LP E+ +AD V A+ +L ++ I+HLQ + EGC + L + +R S + ED+ ++S ++RRQ+E E+FVP+M +++ L G E+ + AR PQT G+P +ISPS W S++ L +G +TLPCDKLDAL+A A +IP L+R+EHPG + LGADDFLPIFIY
Sbjct: 314 VDTARLRPALCVRIL--------------------GTDYADDHTVYILWVLDVLAGAEWRVPRRFREFFELHEELVALRPSTEKLDFPTRRPSLYETTHSVNDRRVRLERYARRVSGMLFGARLHAHSGDVALALQRFLDVPKRRASLELLERN-PDITLRQAAQVAVCQVLALPAFEKILADIVA------AAGGHAFESGLDMLAKMKQYIDHLQACLLEGCADLLVAVALRRKSCIA-------------------------------EDDLNAILSSAIRRQIETEIFVPLMDKLHGLL--RGDIDAEERRLAARCANARHMPQTALGIPVHHISPSSWESAIYQLSNIGSYTLPCDKLDALLAAAKEIPQLYRIEHPGTE-NHLGADDFLPIFIY 652
BLAST of mRNA_Ecto-sp8_S_contig1082.1206.1 vs. uniprot
Match: A0A7S3ZMF8_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZMF8_9STRA) HSP 1 Score: 162 bits (409), Expect = 8.240e-38 Identity = 124/361 (34.35%), Postives = 170/361 (47.09%), Query Frame = 1
Query: 2347 SYLVWVMDVESGAEWRVRRCHPEFSELWEVCTGMRPSLARLDFPPWLPDVK---ETAGVVDARRPRLEAYLQRLCSLLYMGPLHPSSAHLAHLLQDFLGTSPRVETLGRLQRSRPERELRQALQVRAWQMFRLPPLERAVADFVREICDSPASRSKKTVPAEAVLKRLTDVIEHLQYVVTEGC--FNELREMVRSSSVVTASAGRGHSSGRGSEGGEGGGNDHPELASLAEEDEALDL-ISGSVRRQVEAEVFVPVMGRIYKKLLSEGATARLEKAVVLGVEEARGKPQTYHGVPTSNISPSGWSSSMRLLQTVGLFTLPCDKLDALMAVAHDIPALHRVEHPGDNASSLGADDFLPIFIY 3411
+Y VW +D SGAEWRVRR F E+ + + P D PD +T + R LE YL+ SLL GPLH ++ L L+DFL R+ +L L+R+ P+ LR+A QV A Q+ P L+ V+ V A R K+ +L + I+ LQ + EGC F E M R+ + E LDL + +VRRQVEAEVFVP+ + + L + A E + AR K Q G+ + SPS W +++ L TVG +TLPCD+LD L+A A +IP + EH G+ LG DDFLPIF+Y
Sbjct: 244 AYAVWTLDARSGAEWRVRRSFARFREVRTIVKRLAPRDVYEDLDRTFPDEAAFYDTVSSIQERCRALENYLRSCLSLLLTGPLHNNAGRLHAALEDFLDVPARLASLELLERN-PDAHLRRAAQVAAHQVLATPSLDGVVSTIVA------ACRGKE---GHDLLGAMATAIDGLQAALVEGCGPFFEGVVMRRTRKMGL---------------------------------EELDLLVRAAVRRQVEAEVFVPLSSVLDESLRRD--LAEEETMLRASCAAARLKTQAALGIAPEHASPSKWEAAVYRLATVGSYTLPCDRLDVLLAAAREIPVIFAAEHKGEEV--LGGDDFLPIFVY 557
BLAST of mRNA_Ecto-sp8_S_contig1082.1206.1 vs. uniprot
Match: A0A7S3QEE6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QEE6_9STRA) HSP 1 Score: 129 bits (323), Expect = 2.400e-27 Identity = 106/387 (27.39%), Postives = 175/387 (45.22%), Query Frame = 1
Query: 2350 YLVWVMDVESGAEWRVR-RCHPEFSELWEVCTGMRPSLARLDFPP--WLP--DVKETAGVVDARRPRLEAYLQRLCSLLYMGPLHPSSAHLAHLLQDFLGTSP-------RVETLGRLQRSRPERELRQALQVRAWQMFRLPPLERAVADFVREICDSPA----------SRSKKTVPAEAVLKRLTD---VIEHLQYVVTEGCFNELREMVRSSSVVTASAGRGHSSGRGSEGGEGGGNDHPELASLAEEDEAL----DLISGSVRRQVEAEVFVPVMGRIYKKLLSEGATARLEKAVVLGVEEARGKPQTYHGVPTSNISPSGWSSSMRLLQT-VGLFTLPCDKLDALMAVAHDIPALHRVEHPGDNASS---LGADDFLPIFIY 3411
+ +WV DVESG EW R +F EL + S+ +L FP WL + + V D R +LE +L+ LC+L+Y G + S++ +A +Q FLG R + +G R ++L QA+++ +++F LP + FV ++ ++ T+ E ++ L V ++ ++ +GC +L + S +++ DE L L S+R Q+E ++VP+ + +LL G +K V+ R + Q++ + N SPS W+S + +L + VG TLPC+KL A++ + +I L EHPG + LGADDFLPIFIY
Sbjct: 147 FTIWVFDVESGTEWYAPVRYFKDFEELRIATLALSKSVEKLPFPSSMWLSGDETNLSLSVKDGRSAQLEDFLRGLCNLVYTGEIGSSTSEIALYVQTFLGCDNQLMSVHMREQVIGMTGTDRSHQQLSQAIKLYTYRLFLLPTFKALFKRFVNDVKRRATLIDERKTVTIQSAQSTIEKEKIIGELVTIKHVFSNIWNLIIDGCLADLDAIANSQDFSIIGT------------------------NVSSPDENLVYREALYRESIREQIEIHLYVPLRSTV-SRLLVHGWRYD-DKIFAYKVQALRRESQSFFKISLKNQSPSAWASVVHILSSGVGRSTLPCNKLKAIVNASKEIGRLSSQEHPGSSGKKSIPLGADDFLPIFIY 507
BLAST of mRNA_Ecto-sp8_S_contig1082.1206.1 vs. uniprot
Match: A0A4D9DGA1_9STRA (VPS9 domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DGA1_9STRA) HSP 1 Score: 124 bits (312), Expect = 3.320e-25 Identity = 121/416 (29.09%), Postives = 186/416 (44.71%), Query Frame = 1
Query: 2311 GKGGRSSA--PQTVSYLVWVMDVESGAEWRVRRCHPEFSELWEVCTGMRPSLARLD---FPPWLPDVKETAGVVDARRPRLEAYLQRLCSLLYM---------GPLHPSSA----------HLAHLLQDFLGTSPRVETLGRLQ----RSRPERELRQALQVRAWQMFRLPPLERAVADFVREICDSPASRSKKTVPAEAVLKRL-------TDVIEHL---------QYVVTEGCFNELREMVRSSSVVTASAGRGHSSGRGSEGGEGGGNDHPELASLAEEDEALDL---ISGSVRRQVEAEVFVPVMGRIYKKLLSEGATARLEKAVVLGVEEARGKPQTYHGVPTSNISPSGWSSSMRLLQTVG--LFTLPCDKLDALMAVAHDIPALHRVEHPGDNASSLGADDFLPIFIY 3411
G+GG++ +T +++WV+D+ESG EWRVR+ E L E + MRP +D FP ET ++ RLE YL+RL + PL P++ +A +LQDFLG + RV+ L + + P+R LR+ +QV W+ R + + EI D E +KR TD++ Q + T LR M R+ +T+ P +AS + E D+ +RR +EAE F+P+ R+Y++++ E EK + + +PQ++ G+ NIS S W +++ L+ + + TLP DKLDAL+A +I A HR EH LGAD+FLP+FIY
Sbjct: 499 GRGGKAGKRISETYRFVLWVLDLESGEEWRVRKGPSEMLALHEAVSVMRPGSVGIDGIKFP-LKRHKSETNPPSLEKQARLEQYLRRLTGVSSSHSMVTSSPPSPLGPAAKPVVPSQETDYEVAKVLQDFLGATERVDELTTMAHTVGKGDPQRSLRRRIQVCTWEGIR-----KGI-----EINDGGGGGESMQAKLEVFVKRTKECDVQETDLLRAYSDFLGRSSRQLLDTVPFGGSLRNMART--TLTS----------------------PSMASGSGEVGEADVDRFCLAEIRRVLEAETFLPLRLRLYERVMVE-TDIEEEKRLAQKCAIFQARPQSFFGIAVENISISSWEAAVGHLRRLSGEITTLPSDKLDALVAAVREIHACHRREHGDATDLHLGADEFLPVFIY 878
BLAST of mRNA_Ecto-sp8_S_contig1082.1206.1 vs. uniprot
Match: A0A7S2CVH7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CVH7_9STRA) HSP 1 Score: 110 bits (276), Expect = 2.230e-24 Identity = 68/167 (40.72%), Postives = 92/167 (55.09%), Query Frame = 1
Query: 2212 VVPTQGLRKALNVRILEQPXXXXXXXXXXXXXXGKGGRSSAPQTVSYLVWVMDVESGAEWRVRRCHPEFSELWEVCTGMRPSLARLDFPPWLPDVKETAGVVDARRPRLEAYLQRLCSLLYMGPLHPSSAHLAHLLQDFLGTSPRVETLGRLQRSRPERELRQALQV 2712
VV GLR AL +R+L G YL+WV+DVESGAEWR+ R + EF +L E +RPSL +LDFP P + ET V+ R+ RLE +L+R+ SLL PLH SA++A +QDFL S R E L + R P+R +R ++Q+
Sbjct: 11 VVSMDGLRPALCIRVL--------------------GAEHLEDHTEYLIWVLDVESGAEWRISRRYREFFDLAERLQALRPSLLKLDFPARRPALYETVATVNDRKARLEKWLRRVSSLLCYAPLHIQSANIALHVQDFLDASSREEKLNSIARQ-PDRIVRHSVQI 156
BLAST of mRNA_Ecto-sp8_S_contig1082.1206.1 vs. uniprot
Match: A0A7S0TBT3_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0TBT3_9STRA) HSP 1 Score: 115 bits (287), Expect = 1.210e-22 Identity = 123/465 (26.45%), Postives = 191/465 (41.08%), Query Frame = 1
Query: 2215 VPTQGLRKALNVRILEQPXXXXXXXXXXXXXXGKGGRSSAPQTVSYLVWVMDVESGAEWRVR-RCHPEFSELWEVCTGMRPS-------LARLDFP--PWLPDVKETAGVV----------------DARRPR---------------LEAYLQRLCSLLYM-GPLHPSSAHLAHLLQDFLGTSPRVETLGRLQ-----------RSRPERELRQALQVRAWQMFRLPPLERAVADFVR------------EICDSPASRSKKTVPAEAVLKRLTDVIEHLQYVVTEGCFNELREMVRSSSVVTASAGRGHSSGRGSEGGEGGGNDHPELASLAEEDEALDLISGSVRRQVEAEVFVPVMGRIYKKLLSEGATARLEKAVVLGVEEARGKPQTYHGVPTSNISPSGWSSSMRLL-QTVGLFTLPCDKLDALMAVAHDIPALHRVEHPGDNASSLGADDFLPIFIY 3411
+P G+RK L+ RI+ ++Y +WV D+ESG EW R +FS+L E P+ L+ L F P +P+ + V RR R LE +L+ L ++Y PLH S+A +A +Q FLG +E L ++ L++++Q +W++F L ++ V DFV E D S K E +L+ + ++ L ++ +GC N+L+ + P +LA+E L+ +VR QVE EV+VP+ + + L++ +E V ++E R +PQ + + SPS W S R+L Q VG+ TLPC KL A++ A +I LH EH G LGAD+FLPIFI+
Sbjct: 98 IPLHGIRKGLSARIVNS--------FVESVGSNPTTNDGIKSRIAYTIWVYDIESGREWYAPIRYWKDFSDLREAALSSLPTNSNVHRELSMLKFAKDPAIPNENNSGWSVAVFGSPSMSSPMSTLQQRRRKRKNDEFDEARQQTSQSLEEFLRELLGIIYTCHPLHTSTAEIALYVQSFLGVDAGLEDRSELDIHTFENPSDRLEDETQQLLKRSIQRYSWRIFLLHTMKAIVKDFVDAARARGPKLHEIESMDVDTKGSLKARAMEELLQ-IQKFLDQLVDLILDGCSNDLQSIAERREYF------------------------PIHKNLADETYWDRLVREAVREQVEIEVYVPLRSVVSRLLVNGWRHEDME--VHFKIQELRKRPQGMFRIEKT--SPSHWQSVARILKQGVGMSTLPCVKLRAIVDAAREISRLHEREHNGQEL--LGADEFLPIFIF 523 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig1082.1206.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 19
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig1082.1206.1 >prot_Ecto-sp8_S_contig1082.1206.1 ID=prot_Ecto-sp8_S_contig1082.1206.1|Name=mRNA_Ecto-sp8_S_contig1082.1206.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=1137bp RRRGIGAKHSSVLLCGAPAQAFNHCHARGRPDTAIRSPGRMNDEAKVLFDback to top mRNA from alignment at Ecto-sp8_S_contig1082:9706..17320+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig1082.1206.1 ID=mRNA_Ecto-sp8_S_contig1082.1206.1|Name=mRNA_Ecto-sp8_S_contig1082.1206.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=7615bp|location=Sequence derived from alignment at Ecto-sp8_S_contig1082:9706..17320+ (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig1082:9706..17320+ >mRNA_Ecto-sp8_S_contig1082.1206.1 ID=mRNA_Ecto-sp8_S_contig1082.1206.1|Name=mRNA_Ecto-sp8_S_contig1082.1206.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=3411bp|location=Sequence derived from alignment at Ecto-sp8_S_contig1082:9706..17320+ (Ectocarpus species8 EcLAC_412)back to top |