mRNA_Ecto-sp8_S_contig1082.1202.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig1082.1202.1 vs. uniprot
Match: D7G6Z7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6Z7_ECTSI) HSP 1 Score: 159 bits (401), Expect = 3.790e-49 Identity = 76/82 (92.68%), Postives = 79/82 (96.34%), Query Frame = 1
Query: 7 IFKLIQAEATPEQWKQWLRAPLEHAAAKGNLDLFTRLMDAGADGSAGWRGCYGRTLLGAAACGDGDQMVQALLEAGATDDVN 252
IFKL+Q EATPEQWKQWLR PLEHAAAKGNLDLFTRLMDAGADG +GWRGCYGRTLLGAAACGDGDQMV+ALLEAGATDDVN
Sbjct: 4 IFKLVQEEATPEQWKQWLRVPLEHAAAKGNLDLFTRLMDAGADGCSGWRGCYGRTLLGAAACGDGDQMVRALLEAGATDDVN 85
BLAST of mRNA_Ecto-sp8_S_contig1082.1202.1 vs. uniprot
Match: D8LQE2_ECTSI (Ankyrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQE2_ECTSI) HSP 1 Score: 139 bits (349), Expect = 3.430e-40 Identity = 68/85 (80.00%), Postives = 76/85 (89.41%), Query Frame = 1
Query: 1 MEIFKLIQAEATPEQWKQWLRAPLEHAAAKGNLDLFTRLMDAGADGSAGWRGCYGRTLLGAAACGDG-DQMVQALLEAGATDDVN 252
+EIFKL++ EA PEQWKQW RAPLEHA A+GNLDLFTRLMDAGADG AGWRGC+GRTLLGAAACG+ D+MV+ALLEAGA DVN
Sbjct: 18 IEIFKLVKEEAAPEQWKQWFRAPLEHATARGNLDLFTRLMDAGADGEAGWRGCHGRTLLGAAACGNNSDKMVRALLEAGARRDVN 102
BLAST of mRNA_Ecto-sp8_S_contig1082.1202.1 vs. uniprot
Match: A0A6H5KQY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQY9_9PHAE) HSP 1 Score: 139 bits (351), Expect = 1.400e-38 Identity = 68/84 (80.95%), Postives = 76/84 (90.48%), Query Frame = 1
Query: 1 MEIFKLIQAEATPEQWKQWLRAPLEHAAAKGNLDLFTRLMDAGADGSAGWRGCYGRTLLGAAACGDGDQMVQALLEAGATDDVN 252
M+IFKL+QAE TPEQWK+WL APL HAAAKG LDLFTRL++AGADGSAGWRGC+GRTLLG AA DG+QMV+A LEAGATDDVN
Sbjct: 17 MKIFKLVQAEETPEQWKKWLGAPLNHAAAKGKLDLFTRLINAGADGSAGWRGCHGRTLLGEAARSDGNQMVRAFLEAGATDDVN 100
BLAST of mRNA_Ecto-sp8_S_contig1082.1202.1 vs. uniprot
Match: D8LQN0_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQN0_ECTSI) HSP 1 Score: 136 bits (342), Expect = 4.700e-36 Identity = 65/84 (77.38%), Postives = 76/84 (90.48%), Query Frame = 1
Query: 1 MEIFKLIQAEATPEQWKQWLRAPLEHAAAKGNLDLFTRLMDAGADGSAGWRGCYGRTLLGAAACGDGDQMVQALLEAGATDDVN 252
+EIFKL++ EATPEQWK+WLRAPLEHAAA+GNLDLFTRLMDAGA+ AGWRGC+GRTLLGAAA G ++M++ LL AGATDDVN
Sbjct: 19 IEIFKLLRREATPEQWKEWLRAPLEHAAAEGNLDLFTRLMDAGANTEAGWRGCHGRTLLGAAALGRSEKMIRTLLTAGATDDVN 102
BLAST of mRNA_Ecto-sp8_S_contig1082.1202.1 vs. uniprot
Match: D8LQE9_ECTSI (Similar to ankyrin 2,3/unc44, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQE9_ECTSI) HSP 1 Score: 126 bits (317), Expect = 1.210e-34 Identity = 66/87 (75.86%), Postives = 72/87 (82.76%), Query Frame = 1
Query: 1 MEIFKLIQAEATPEQWKQWLRAPLEHAAAKGNLDLFTRLMDAGADGSAGWRG--CYGRTLLGAAACGD-GDQMVQALLEAGATDDVN 252
+EIFKL++ EAT QWKQWLR PLEHAAAKGNLDLFTRLMDAGA G GWRG C+ RTLLGAAACG D+M+ ALLEAG TDDVN
Sbjct: 16 IEIFKLVKEEATAGQWKQWLRTPLEHAAAKGNLDLFTRLMDAGAGGEPGWRGWGCHERTLLGAAACGTKSDKMIWALLEAGVTDDVN 102
BLAST of mRNA_Ecto-sp8_S_contig1082.1202.1 vs. uniprot
Match: D7G692_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G692_ECTSI) HSP 1 Score: 127 bits (319), Expect = 1.600e-32 Identity = 62/85 (72.94%), Postives = 76/85 (89.41%), Query Frame = 1
Query: 1 MEIFKLIQAEATPEQWKQWLRAPLEHAAAKGNLDLFTRLMDAGADGSAGWRGCYGRTLLGAAACGDGDQMVQALL-EAGATDDVN 252
+EIFKL++ +AT QW++WLRAPLEHAAA+GN+DLFTRLMDAGADGSAGWRGC+GRTLLGAAA G +++V+ LL E GAT+DVN
Sbjct: 70 VEIFKLVREQATSMQWREWLRAPLEHAAAEGNIDLFTRLMDAGADGSAGWRGCHGRTLLGAAAYGKNEEIVERLLAEDGATEDVN 154
BLAST of mRNA_Ecto-sp8_S_contig1082.1202.1 vs. uniprot
Match: D8LB27_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB27_ECTSI) HSP 1 Score: 126 bits (316), Expect = 2.270e-32 Identity = 64/85 (75.29%), Postives = 71/85 (83.53%), Query Frame = 1
Query: 1 MEIFKLIQAEATPEQWKQWLRAPLEHAAAKGNLDLFTRLMDAGA-DGSAGWRGCYGRTLLGAAACGDGDQMVQALLEAGATDDVN 252
+EIFKL+Q E T EQWKQWL+ PLEHAAA+GNLDLFTRLMDAG G GWRGC GRTLLGAAA G D++V+ALLEAGA DDVN
Sbjct: 20 IEIFKLVQEEVTSEQWKQWLQVPLEHAAARGNLDLFTRLMDAGGFGGERGWRGCNGRTLLGAAAWGKSDKVVRALLEAGAGDDVN 104
BLAST of mRNA_Ecto-sp8_S_contig1082.1202.1 vs. uniprot
Match: A0A6H5L812_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L812_9PHAE) HSP 1 Score: 125 bits (315), Expect = 2.380e-32 Identity = 62/84 (73.81%), Postives = 70/84 (83.33%), Query Frame = 1
Query: 1 MEIFKLIQAEATPEQWKQWLRAPLEHAAAKGNLDLFTRLMDAGADGSAGWRGCYGRTLLGAAACGDGDQMVQALLEAGATDDVN 252
+EIFKL+Q AT EQWK+WLRAP EHAAA+GNLD FTRLMDAGA+ AGWRGC GRTLLGAAA G ++MV+ L AGATDDVN
Sbjct: 19 IEIFKLVQRGATSEQWKEWLRAPREHAAAEGNLDFFTRLMDAGANAGAGWRGCNGRTLLGAAAFGRSEKMVRTTLTAGATDDVN 102
BLAST of mRNA_Ecto-sp8_S_contig1082.1202.1 vs. uniprot
Match: D8LD22_ECTSI (MHC_I C-terminus family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD22_ECTSI) HSP 1 Score: 124 bits (311), Expect = 1.600e-31 Identity = 61/84 (72.62%), Postives = 69/84 (82.14%), Query Frame = 1
Query: 1 MEIFKLIQAEATPEQWKQWLRAPLEHAAAKGNLDLFTRLMDAGADGSAGWRGCYGRTLLGAAACGDGDQMVQALLEAGATDDVN 252
+EIFKL+Q EAT +QWK+WLRAPLEHAAA GNL LFTRLMDAGA AGWRGC GRTLLGAAAC ++++ALL AGA DVN
Sbjct: 21 VEIFKLVQREATSKQWKEWLRAPLEHAAASGNLGLFTRLMDAGASAEAGWRGCDGRTLLGAAACSKNKKILRALLTAGAKSDVN 104
BLAST of mRNA_Ecto-sp8_S_contig1082.1202.1 vs. uniprot
Match: A0A6H5L7E1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7E1_9PHAE) HSP 1 Score: 124 bits (310), Expect = 4.350e-31 Identity = 61/83 (73.49%), Postives = 70/83 (84.34%), Query Frame = 1
Query: 1 MEIFKLIQAEATPEQWKQWLRAPLEHAAAKGNLDLFTRLMDAGADGSAGWRGCYGRTLLGAAACGDGDQMVQALLEAGATDDV 249
+EIFKL+Q EAT EQWK+WLRAPLEHAAA+GNLD FTRLMDAGA+ AG RGC+GRTLLGA AC ++MV+ LL GATDDV
Sbjct: 519 IEIFKLVQKEATSEQWKEWLRAPLEHAAAEGNLDFFTRLMDAGANVEAGRRGCHGRTLLGATACDRSEKMVRTLLTTGATDDV 601 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig1082.1202.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig1082.1202.1 >prot_Ecto-sp8_S_contig1082.1202.1 ID=prot_Ecto-sp8_S_contig1082.1202.1|Name=mRNA_Ecto-sp8_S_contig1082.1202.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=84bp MEIFKLIQAEATPEQWKQWLRAPLEHAAAKGNLDLFTRLMDAGADGSAGWback to top mRNA from alignment at Ecto-sp8_S_contig1082:3582..3833+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig1082.1202.1 ID=mRNA_Ecto-sp8_S_contig1082.1202.1|Name=mRNA_Ecto-sp8_S_contig1082.1202.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=252bp|location=Sequence derived from alignment at Ecto-sp8_S_contig1082:3582..3833+ (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig1082:3582..3833+ >mRNA_Ecto-sp8_S_contig1082.1202.1 ID=mRNA_Ecto-sp8_S_contig1082.1202.1|Name=mRNA_Ecto-sp8_S_contig1082.1202.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=252bp|location=Sequence derived from alignment at Ecto-sp8_S_contig1082:3582..3833+ (Ectocarpus species8 EcLAC_412)back to top |