mRNA_Ecto-sp8_S_contig10755.1135.1 (mRNA) Ectocarpus species8 EcLAC_412

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp8_S_contig10755.1135.1
Unique NamemRNA_Ecto-sp8_S_contig10755.1135.1
TypemRNA
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Homology
BLAST of mRNA_Ecto-sp8_S_contig10755.1135.1 vs. uniprot
Match: D8LI72_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LI72_ECTSI)

HSP 1 Score: 659 bits (1699), Expect = 1.320e-234
Identity = 348/445 (78.20%), Postives = 354/445 (79.55%), Query Frame = 1
Query:    1 MERTRVAGRKRARPTPSLRCYIVDDHCDALSKIHRAIRNGALPFTGLSAVHFDAHPDLMVTPDMPAETCFRPHELYDTLARTEGGIAEWILPLVYQGHLSTLWWVRPRWARQFTDGDHRFCVGQVKATGKLRVSSTAPYFVDDRLYCREEDMQECKPLHLCVSLVPDNLPSPAECLTGAELQAGSVRPQNRVGAQADASDGAKSPTVAHGNGDGTDKTEGARVAEETACSTRFTISTVPQQSEKSQGGCSRPTPWVLDICLDYFTTENPFILELEDHIGKRDAAVVRDFYERPRFRGATTPLSHETQLEHERIFKTEVDRLLGAAGEESANGAERPAADTKGEAERAIAAGGPASKDLAEGSLGAARSRRFPGEVVVDGSTSVSEEADTREEADGGGXGSDSNEEVHGLRRLTELFDPDGEDRLLAGKFASVVGRIGREGRQKVA 1335
            MERTRVAGRKRARPTPSLRCYIVDDHCDALSKIHRAIRNGALPFTGLSAVHFDAHPDLMVTPDMPAETCFRPHELYDTLA+TEGGIAEWILPLVYQGHLSTLWWVRPRWARQFTDGDHRFCVGQVKATGKLRVSSTAPYFVDDRLYCREEDM ECKPLHLCVSLVPDNLPSPAECLTGAELQ                                                                               DYFTTENPFILELEDH+GKRDAAVVRDFY RPRFRGA TPL HETQLEHE IFKTEVDRLLGAAGEESANGAE+PAADTKGEAERAI AGG ASKDLAEGS GAARS RFPGEVVVDGST VSEEADTREEADGGG GS +++EVHGLRRLTELFDPDGEDRLLAGKFASVVGRIGREGRQKVA
Sbjct:    1 MERTRVAGRKRARPTPSLRCYIVDDHCDALSKIHRAIRNGALPFTGLSAVHFDAHPDLMVTPDMPAETCFRPHELYDTLAQTEGGIAEWILPLVYQGHLSTLWWVRPRWARQFTDGDHRFCVGQVKATGKLRVSSTAPYFVDDRLYCREEDMHECKPLHLCVSLVPDNLPSPAECLTGAELQ-------------------------------------------------------------------------------DYFTTENPFILELEDHLGKRDAAVVRDFYGRPRFRGAATPLPHETQLEHEHIFKTEVDRLLGAAGEESANGAEQPAADTKGEAERAIVAGGTASKDLAEGSPGAARSGRFPGEVVVDGSTPVSEEADTREEADGGGGGSGASQEVHGLRRLTELFDPDGEDRLLAGKFASVVGRIGREGRQKVA 366          
BLAST of mRNA_Ecto-sp8_S_contig10755.1135.1 vs. uniprot
Match: A0A024UGZ0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UGZ0_9STRA)

HSP 1 Score: 166 bits (419), Expect = 1.180e-43
Identity = 109/295 (36.95%), Postives = 140/295 (47.46%), Query Frame = 1
Query:   52 LRCYIVDDHCDALSKIHRAIRNGALPFTGLSAVHFDAHPDLMVTPDMPAETCFRPHELYDTLARTEGGIAEWILPLVYQGHLSTLWWVRPRWARQFTDGDHRFCVGQVKATGKLRVSSTAPYFVDDRLYCREEDMQECKPLHLCVSLVPDNLPSPAECLTGAELQAGSVRPQNRVGAQADASDGAKSPTVAHGNGDGTDKTEGARVAEETACSTRFTISTVPQQSEKSQGGCSRPTPWVLDICLDYFTTENPFILELEDHIGKRDAAVVRDFYERPRFRGATTPLSHETQLEHER 936
            +R  +VDDH  AL  IH+AIR   LPF   + VHFDAHPDL    D+PA++ F P +LYD L  +E GIA ++LPL + GH+ +L WV+P WA+Q T GD  F VG+    G L V+S   YFVD+ +Y  E ++ + + L L V  + D   SPA           SVRP   +G                                                            P+VLDICLDYFTT NPF+ E E   G  DA V+R  Y   +F+     LSH  QLEH R
Sbjct:    5 MRVVVVDDHHHALEPIHQAIRRRVLPFANWTLVHFDAHPDLAFPRDVPAKSVFTPSQLYDVLDASEAGIASFVLPLSFAGHMESLIWVKPPWAQQMTLGDQAFAVGEHIDNGTLCVTSNHSYFVDEAMYAPESELTKKQTLQLTVCELHD---SPAS----------SVRPP--LG------------------------------------------------------------PFVLDICLDYFTTLNPFLHEFEKACGVDDAQVLRHIYGGLQFKNIPPTLSHAQQLEHHR 224          
BLAST of mRNA_Ecto-sp8_S_contig10755.1135.1 vs. uniprot
Match: A0A485KQ73_9STRA (Aste57867_10189 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KQ73_9STRA)

HSP 1 Score: 159 bits (403), Expect = 3.460e-41
Identity = 103/301 (34.22%), Postives = 137/301 (45.51%), Query Frame = 1
Query:   64 IVDDHCDALSKIHRAIRNGALPFTGLSAVHFDAHPDLMVTPDMPAETCFRPHELYDTLARTEGGIAEWILPLVYQGHLSTLWWVRPRWARQFTDGDHRFCVGQVKATGKLRVSSTAPYFVDDRLYCREEDMQECKPLHLCVSLVPDNLPSPAECLTGAELQAGSVRPQNRVGAQADASDGAKSPTVAHGNGDGTDKTEGARVAEETACSTRFTISTVPQQSEKSQGGCSRPTPWVLDICLDYFTTENPFILELEDHIGKRDAAVVRDFYERPRFRGATTPLSHETQLEHERIFKTEVDRLL 966
            +VDDH   L  IH+AIR   LPF+  + VHFDAHPDL     +PA+  F P   YD L  +E GIA ++LPLVY GH+  L WV+P WA Q   G   F VG+  ATG+LRVSS   YFVD+ +Y    ++ + + LHL V                 EL +GS+ P     A AD                                                        P+VLDICLDYF T NPF    +   G  D  ++R  Y    F+ A++ LSH  + EH+ +    +DR++
Sbjct:    8 VVDDHHHVLEPIHKAIRKRILPFSNWNMVHFDAHPDLAFPRSIPADRIFAPFAFYDDLDESEAGIASFLLPLVYAGHMKNLVWVKPPWATQMLLGHEEFTVGRHDATGELRVSSQHTYFVDEVMYANPTELSKAQTLHLSV----------------CELGSGSMPP-----APAD--------------------------------------------------------PYVLDICLDYFATINPFQKAFDAACGVEDGQLLRFIYGNLAFKTASSTLSHVEKREHQALHAAFLDRII 231          
BLAST of mRNA_Ecto-sp8_S_contig10755.1135.1 vs. uniprot
Match: T0QNM0_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QNM0_SAPDV)

HSP 1 Score: 154 bits (389), Expect = 3.580e-39
Identity = 102/302 (33.77%), Postives = 133/302 (44.04%), Query Frame = 1
Query:   61 YIVDDHCDALSKIHRAIRNGALPFTGLSAVHFDAHPDLMVTPDMPAETCFRPHELYDTLARTEGGIAEWILPLVYQGHLSTLWWVRPRWARQFTDGDHRFCVGQVKATGKLRVSSTAPYFVDDRLYCREEDMQECKPLHLCVSLVPDNLPSPAECLTGAELQAGSVRPQNRVGAQADASDGAKSPTVAHGNGDGTDKTEGARVAEETACSTRFTISTVPQQSEKSQGGCSRPTPWVLDICLDYFTTENPFILELEDHIGKRDAAVVRDFYERPRFRGATTPLSHETQLEHERIFKTEVDRLL 966
            ++VDDH   L  IHRAIR   LPF   + VH DAH DL   P +PA T F P  LYD L  +E GIA ++LPL Y GH+  L W++P WA Q   G H F VGQ KATG L V+S   YF+D+ LY   + + +   L L V                AEL A  V                                EG                                 P+VLDICLDYF+T NPF  ++   +G+  A+++   Y    ++  T  L H T+LEH R+F + +  L 
Sbjct:    7 HVVDDHHHVLEPIHRAIRQRRLPFANFTIVHLDAHADLAFPPSLPAATIFSPDALYDGLDASEAGIASFLLPLAYAGHMHRLVWIKPPWATQMAIGTHAFDVGQHKATGCLGVTSHESYFIDENLYAPRDALDKPASLELTV----------------AELPAAPVP-------------------------------EG---------------------------------PYVLDICLDYFSTLNPFRQDITRAMGEDTASLLSCIYGDLSYKKKTVELPHSTRLEHGRLFASTIKTLF 228          
BLAST of mRNA_Ecto-sp8_S_contig10755.1135.1 vs. uniprot
Match: A0A835Z3T2_9STRA (UPF0489 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3T2_9STRA)

HSP 1 Score: 142 bits (357), Expect = 6.950e-37
Identity = 65/119 (54.62%), Postives = 84/119 (70.59%), Query Frame = 1
Query:   34 ARPTPSLRCYIVDDHCDALSKIHRAIRNGALPFTGLSAVHFDAHPDLMVTPDMPAETCFRPHELYDTLARTEGGIAEWILPLVYQGHLSTLWWVRPRWARQFTDGDHRFCVGQVKATGK 390
            A   P++ C++V+DH DAL   H A+R   L   G++ VH DAHPDL VT DM A+ CF+P  LYD L  + GGIAEWI+PLVY+GHL T+WW+RP WA QFTDG +   VG+ +ATG+
Sbjct:   10 AAAAPTIPCHVVEDHHDALPFWHLAMRRKRLAQQGITMVHIDAHPDLCVTEDMQADICFQPRALYDALDNSVGGIAEWIIPLVYEGHLDTIWWLRPPWADQFTDGTYALGVGKSQATGE 128          
BLAST of mRNA_Ecto-sp8_S_contig10755.1135.1 vs. uniprot
Match: A0A1V9Z4E5_9STRA (UPF0489 protein C5orf22-like n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z4E5_9STRA)

HSP 1 Score: 146 bits (368), Expect = 3.330e-36
Identity = 102/302 (33.77%), Postives = 129/302 (42.72%), Query Frame = 1
Query:   61 YIVDDHCDALSKIHRAIRNGALPFTGLSAVHFDAHPDLMVTPDMPAETCFRPHELYDTLARTEGGIAEWILPLVYQGHLSTLWWVRPRWARQFTDGDHRFCVGQVKATGKLRVSSTAPYFVDDRLYCREEDMQECKPLHLCVSLVPDNLPSPAECLTGAELQAGSVRPQNRVGAQADASDGAKSPTVAHGNGDGTDKTEGARVAEETACSTRFTISTVPQQSEKSQGGCSRPTPWVLDICLDYFTTENPFILELEDHIGKRDAAVVRDFYERPRFRGATTPLSHETQLEHERIFKTEVDRLL 966
            Y+VDDH       H AIR   LPF+ ++ VH DAHPDL     +PA T F P  LYD L  ++ GIA ++LPL Y GHL  L WV+P WA Q   GDH F VG    T    VSS   YFVD+ L+ R E + E KPL L V                AEL A                  A +PT                                              + +VLDICLDYF+T NPF+ +L    G   AA+VR  Y    ++     + HE  L H R+F + +  + 
Sbjct:   11 YVVDDH-------HHAIRRRLLPFSNVTIVHLDAHPDLAFPRSIPAATIFAPEALYDALDASDAGIASFLLPLAYAGHLRHLVWVKPPWATQMATGDHEFLVG----TDACAVSSHEAYFVDEDLFARAETLSEAKPLSLTV----------------AELPA------------------APTPTA---------------------------------------------SSFVLDICLDYFSTHNPFLQDLVAAKGPTTAALVRSVYCGLLYKCVPAAVPHEVALAHRRLFASTMTTIF 222          
BLAST of mRNA_Ecto-sp8_S_contig10755.1135.1 vs. uniprot
Match: A0A2R5G5M2_9STRA (UPF0489 protein C5orf22 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G5M2_9STRA)

HSP 1 Score: 146 bits (369), Expect = 1.960e-35
Identity = 95/289 (32.87%), Postives = 129/289 (44.64%), Query Frame = 1
Query:   49 SLRCYIVDDHCDALSKIHRAIRNGALPFTGLSAVHFDAHPDLMVTPDMPAETCFRPHELYDTLARTEGGIAEWILPLVYQGHLSTLWWVRPRWARQFTDGDHRFCVGQVKAT---------------GKLRVSSTAPYFVDDRLYCREEDMQECKPLHLCVSLVPDNLPSPAECLTGAELQAGSVRPQNRVGAQADASDGAKSPTVAHGNGDGTDKTEGARVAEETACSTRFTISTVPQQSEKSQGGCSRPTPWVLDICLDYFTTENPFILELEDHIGKRDAAVVRDFY 870
            +L  Y+  DH +AL  +H AIR G + F+GL+ +H D+HPDLMV P MPA+  F+P EL+  LA++E GIAE+ILP VY GHL  L W+RP WA Q  DG   F VG+                   G LRV+   PY+ D+ L C  ED+Q  K + + V+         A C   A +Q                                              C  R                     PWVLDICLDYF+  NPF ++L+  +G + A + ++ Y
Sbjct:   41 TLPVYVSGDHNEALESLHAAIRVGEVAFSGLAMLHVDSHPDLMVPPRMPADLVFKPRELHWELAKSETGIAEFILPAVYAGHLERLVWLRPTWADQLPDGQWEFKVGKAPGCSADEIITEDDERVNGGPLRVTWRTPYYEDEGLTCPVEDLQGAKSVEILVA-------GAATCTPQAFVQ---------------------------------------------VCGDR---------------------PWVLDICLDYFSVNNPFYVDLQTKLGVKAATLCQEVY 256          
BLAST of mRNA_Ecto-sp8_S_contig10755.1135.1 vs. uniprot
Match: A0A1V9ZZD1_9STRA (UPF0489 protein C5orf22-like n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZZD1_9STRA)

HSP 1 Score: 142 bits (359), Expect = 6.920e-35
Identity = 93/306 (30.39%), Postives = 141/306 (46.08%), Query Frame = 1
Query:   52 LRCYIVDDHCDALSKIHRAIRNGALPFTGLSAVHFDAHPDLMVTPDMPAETCFRPHELYDTLARTEGGIAEWILPLVYQGHLSTLWWVRPRWARQFTDGDHRFCVGQVKATGKLRVSSTAPYFVDDRLYCREEDMQECKPLHLCVSLVPDNLPSPAECLTGAELQAGSVRPQNRVGAQADASDGAKSPTVAHGNGDGTDKTEGARVAEETACSTRFTISTVPQQSE-KSQGGCSRPTPWVLDICLDYFTTENPFILELEDHIGKRDAAVVRDFYERPRFRGATTPLSHETQLEHERIFKTEVDRLL 966
            L  ++VDDH   L  IH+AIR   LPF   + +HFDAH DL     +PA+  FRP  LYD L  ++ GIA ++LPLVY GH++ L WV+P WA+Q   G   F VG+   +  LR++S   YFV++ LY    ++ + K ++   SLV                                                                  + T++ +P Q   K Q        ++LDICLDYF+T NPF  EL+  +G++   ++R  Y    ++ +   L H+ QLEH + F + ++ +L
Sbjct:    4 LEVHVVDDHHHVLEPIHKAIRRRVLPFNEFAIIHFDAHADLAFPNTLPADVIFRPENLYDELDASDAGIASFLLPLVYAGHMTKLIWVKPPWAKQMALGTQDFVVGKHLTSECLRLTSKETYFVEEGLYAPLNELTKTKSMNN--SLV------------------------------------------------------------------QLTVAELPMQVNLKGQA-------YILDICLDYFSTLNPFFEELKPALGEQKTLLIRRIYCGLCYKKSELLLPHDVQLEHYKKFSSTINTIL 234          
BLAST of mRNA_Ecto-sp8_S_contig10755.1135.1 vs. uniprot
Match: UPI001864173D (UPF0489 protein C5orf22 homolog isoform X1 n=3 Tax=Megalops cyprinoides TaxID=118141 RepID=UPI001864173D)

HSP 1 Score: 139 bits (351), Expect = 3.740e-33
Identity = 94/280 (33.57%), Postives = 148/280 (52.86%), Query Frame = 1
Query:   61 YIVDDHCDALSKIHRAIRNGALPFTGLSAVHFDAHPDLMVTPDMPAETCFRPHELYDTLARTEGGIAEWILPLVYQGHLSTLWWVRPRWARQFTDGDHRFCVGQVKATGKLRVSSTAPYFVDDRLYCREEDMQECKPLHLCVSLVPDNLPSPAECLTGAELQAGSV-RPQNR-VGAQADASDGAKSPT----VAHGNGDGTDKTEGARVAEETACSTRFTISTVPQQSEKSQGGCS---RPTP-WVLDICLDYFTTENPFILELEDHIGKRDAAVVRDFY 870
            +IV+DH D +  I+RAI +  LP   +  VH D+HPDL++  +MPA+T F    L+  L+     I  WI+P+VY GH+S + W+ P WA+Q  +G+H  CVG+  +T  +RV+ST  YF+ D LY   + ++E KPL L V  V    P+  EC  G E Q     RP+ + V A+ D + G+        +    G  T  + G    E+        + T    + K+  G S    PT  ++LDI LD+F+ +NPF    ++   + + A++++ Y
Sbjct:   16 WIVEDHNDVVPYIYRAIASRHLPMKNIKMVHLDSHPDLLIAVNMPADTVFDKEALFSELS-----IENWIMPMVYAGHVSHVMWLHPYWAQQIREGEHSMCVGRDASTTTIRVTSTDDYFLSDGLYVPSDQLEEPKPLRLSVIRVT---PAEEECGRGEETQERPTKRPRTQTVKAEEDGAAGSSQAACDCRLQPPGGSRTSASNGFGSGEK--------LQTQADSTTKAVAGLSSAIEPTDSFILDIDLDFFSCKNPF----KEMYSQEEYAILQELY 275          
BLAST of mRNA_Ecto-sp8_S_contig10755.1135.1 vs. uniprot
Match: UPI0009076903 (UPF0489 protein C5orf22 homolog isoform X3 n=3 Tax=Crocodylia TaxID=1294634 RepID=UPI0009076903)

HSP 1 Score: 137 bits (346), Expect = 5.310e-33
Identity = 102/301 (33.89%), Postives = 157/301 (52.16%), Query Frame = 1
Query:   22 GRKRARPTPSLRCYIVDDHCDALSKIHRAIRNGALPFTGLSAVHFDAHPDLMVTPDMPAETCFRPHELYDTLARTEGGIAEWILPLVYQGHLSTLWWVRPRWARQFTDGDHRFCVGQVKATGKLRVSSTAPYFVDDRLYCREEDMQECKPLHLCVSLVPDNLPSPAECLTGAELQAGSVRPQNRVGAQADASDGAKSPTVAHGN---GDGTDKTEGARVAEETACSTRFTISTVPQQSEKSQG--GCS-------------RPTPWVLDICLDYFTTENPFILELEDHIGKRDAAVVRDFY 870
            GR R R  P+L  ++V+DH D L  I+RAI +  LP + +S VHFD+HPDL++  +MPA+T F    L+  L+     I  WI+P+VY GH+S + W+ P WA+Q  +G H F VG+  +T  +RV+ST  YF+ D LY   + ++  K LHL V LV    PS        + +A S +   ++   A+ +    +PT + G    G     TE A   EE AC+   T + +   +  S G  GC              +   +VLDI LD+F+ +NPF    +D   + +  ++++ Y
Sbjct:    9 GRGRLRTYPALPVWVVEDHHDVLPFIYRAIGSKHLPASNISFVHFDSHPDLLIPVNMPADTVFDKEALFSELS-----IENWIMPVVYAGHISQVVWLHPIWAQQIKEGRHDFLVGKDTSTTTIRVTSTDHYFLSDGLYVPADQLENQKLLHLNVLLVK---PSETSKQQDDKNEASSAK---KLKLNAEDTANTATPTSSQGLEIVGHYLTDTE-APGDEENACAQDKTETFLESSASCSLGSNGCKPIEMVNDVLQVVQKGDAYVLDIDLDFFSVKNPF----KDTYTQEEYKILQELY 293          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig10755.1135.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LI72_ECTSI1.320e-23478.20Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A024UGZ0_9STRA1.180e-4336.95Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
A0A485KQ73_9STRA3.460e-4134.22Aste57867_10189 protein n=1 Tax=Aphanomyces stella... [more]
T0QNM0_SAPDV3.580e-3933.77Uncharacterized protein n=1 Tax=Saprolegnia diclin... [more]
A0A835Z3T2_9STRA6.950e-3754.62UPF0489 domain-containing protein n=1 Tax=Tribonem... [more]
A0A1V9Z4E5_9STRA3.330e-3633.77UPF0489 protein C5orf22-like n=1 Tax=Achlya hypogy... [more]
A0A2R5G5M2_9STRA1.960e-3532.87UPF0489 protein C5orf22 n=1 Tax=Hondaea fermentalg... [more]
A0A1V9ZZD1_9STRA6.920e-3530.39UPF0489 protein C5orf22-like n=1 Tax=Thraustotheca... [more]
UPI001864173D3.740e-3333.57UPF0489 protein C5orf22 homolog isoform X1 n=3 Tax... [more]
UPI00090769035.310e-3333.89UPF0489 protein C5orf22 homolog isoform X3 n=3 Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig10755contigEcto-sp8_S_contig10755:4313..6724 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score667.9
Seed ortholog evalue3.2e-189
Seed eggNOG ortholog2880.D8LI72
Preferred nameC5orf22
Model size1335
Hectar predicted targeting categoryother localisation
GOsGO:0008150,GO:0009966,GO:0009968,GO:0010646,GO:0010648,GO:0023051,GO:0023057,GO:0046578,GO:0046580,GO:0048519,GO:0048523,GO:0048583,GO:0048585,GO:0050789,GO:0050794,GO:0051056,GO:0051058,GO:0065007,GO:1902531,GO:1902532
Exons4
EggNOG free text desc.UPF0489 domain
EggNOG OGs28PEW@1,2QW2U@2759
Cds size1335
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681143170.0325305-CDS-Ecto-sp8_S_contig10755:4312..46001681143170.0325305-CDS-Ecto-sp8_S_contig10755:4312..4600Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig10755 4313..4600 +
1681143170.042917-CDS-Ecto-sp8_S_contig10755:5098..51661681143170.042917-CDS-Ecto-sp8_S_contig10755:5098..5166Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig10755 5099..5166 +
1681143170.052868-CDS-Ecto-sp8_S_contig10755:5507..59341681143170.052868-CDS-Ecto-sp8_S_contig10755:5507..5934Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig10755 5508..5934 +
1681143170.0699463-CDS-Ecto-sp8_S_contig10755:6172..67241681143170.0699463-CDS-Ecto-sp8_S_contig10755:6172..6724Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig10755 6173..6724 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig10755.1135.1prot_Ecto-sp8_S_contig10755.1135.1Ectocarpus species8 EcLAC_412polypeptideEcto-sp8_S_contig10755 4313..6724 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp8_S_contig10755.1135.1

>prot_Ecto-sp8_S_contig10755.1135.1 ID=prot_Ecto-sp8_S_contig10755.1135.1|Name=mRNA_Ecto-sp8_S_contig10755.1135.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=445bp
MERTRVAGRKRARPTPSLRCYIVDDHCDALSKIHRAIRNGALPFTGLSAV
HFDAHPDLMVTPDMPAETCFRPHELYDTLARTEGGIAEWILPLVYQGHLS
TLWWVRPRWARQFTDGDHRFCVGQVKATGKLRVSSTAPYFVDDRLYCREE
DMQECKPLHLCVSLVPDNLPSPAECLTGAELQAGSVRPQNRVGAQADASD
GAKSPTVAHGNGDGTDKTEGARVAEETACSTRFTISTVPQQSEKSQGGCS
RPTPWVLDICLDYFTTENPFILELEDHIGKRDAAVVRDFYERPRFRGATT
PLSHETQLEHERIFKTEVDRLLGAAGEESANGAERPAADTKGEAERAIAA
GGPASKDLAEGSLGAARSRRFPGEVVVDGSTSVSEEADTREEADGGGGGS
DSNEEVHGLRRLTELFDPDGEDRLLAGKFASVVGRIGREGRQKVA
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mRNA from alignment at Ecto-sp8_S_contig10755:4313..6724+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp8_S_contig10755.1135.1 ID=mRNA_Ecto-sp8_S_contig10755.1135.1|Name=mRNA_Ecto-sp8_S_contig10755.1135.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=2412bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10755:4313..6724+ (Ectocarpus species8 EcLAC_412)
ATGGAAAGAACACGAGTTGCTGGGAGGAAACGTGCGAGACCAACGCCTTC TCTGCGATGCTACATCGTAGACGACCACTGCGATGCCTTGAGCAAAATAC ACAGAGCTATCCGAAACGGCGCGTTGCCCTTCACGGGCCTTTCGGCTGTC CATTTCGATGCCCACCCGGACTTGATGGTGACACCCGACATGCCCGCAGA GACTTGCTTCCGGCCCCACGAACTCTACGACACCCTGGCCCGGACAGAGG GAGGTATCGCAGAGTGGATCCTACCGTTAGTATACCAGGTAAGTCATCCA TGGCTGCTGCTGTGGGCGTCCATCGTGTGTTGCGAGATTCCTGGCCATCC CGCACCTTTCCTCCCCCCGGTCGCTCTCGACTCTCGACTCAACCCGTTGT GCGCGCCGCAGCCAGCATGTCCAAACACCTACTTGTAGTTTTGGTAACTA TTAAGTCAGATGGACCCCAACCCTTGTGTGAATGGAGGAAGACGGGCCGA GATCGGGGTTCGTGTGCTATCGAACTGAACAAAAACGTGTGGAAAAAGTT GGTTGTAGGAGTCCACCACGCGATACATGCAGCGCGCCACCACGTTCACC TCTCGTATTTCGGATCACCTATTGAAGCGCAAGATACGACGGGACCACGC GGAGTTCCTGTTCTCCCGCAGTCTACCGATTGCAATCTCCATGGAAATAT GCCCAGTATGCATCCACCATAGTATGCTACGAGTAGTTCTAACAACGCGG ACCTCCCTAACATTCTCTCGTACACCTGACTTCTAGGGTCACCTTTCCAC CCTGTGGTGGGTGAGACCGCGTTGGGCCAGGCAGTTCACTGACGGGGATC ATCGGTAAGTCATACTGCAAGCACTGCTGTATCTGCATGAACCGATGTGC CACTTCTCCATGTATTGCAATACTAGGCGCTCGTTGATCTCTCTGCTGTT TATTTGCCTTACAACTGCGGTTACTACCTTGTGCGGGTGGAGCTCTCCTT TTCATGGTTTGCCTAGATTAGGTACTCTGTTGCGCAGTGTTCACTCAGCC ACACAAAGAGTACAGGCAACATGGAAGGAGCCCATTCAATAAAAGCACAG AAACCACGGTTAAACATTTCGACCCAATACCCGCCAGCGACCAGTCACCG AGCTGGATGCTAACGTCACCGTTTCTGCTGCCGTGTGTGGTTCAGTTTTT GCGTCGGCCAGGTGAAGGCCACAGGGAAGCTTCGAGTATCCTCGACCGCA CCCTATTTCGTCGACGACAGACTCTACTGCCGCGAGGAGGACATGCAGGA ATGCAAACCCCTGCACCTGTGCGTCAGCCTCGTCCCCGACAACCTGCCGT CTCCAGCGGAGTGTCTCACTGGGGCCGAGCTGCAGGCGGGTTCGGTTCGC CCGCAGAACCGCGTGGGCGCCCAAGCAGATGCTAGCGATGGAGCGAAGTC GCCAACCGTCGCGCATGGAAACGGCGACGGGACGGACAAAACGGAGGGTG CGCGTGTGGCAGAAGAAACGGCTTGTTCGACGAGATTCACGATCTCAACT GTACCACAGCAGTCGGAGAAATCTCAAGGCGGCTGCAGCCGACCAACGCC GTGGGTACTGGACATCTGCTTGGTAGGCGTCCACATTGCTGGCGTACATG TAGCTCCAAAAAAAAACGTACAGGAGTAGTACCTGCCTACTCCGGAGTAT TTTTTTGTCGAGGATGCCACGCTGTGATACGTTGTGTGCATAACGAAAGA CGGGCCCACCACCGACTGAAGATCCAACCGCTTGCGATACGCTGCGTGTG CATGTATTAACTAAAGACCGACCCACACCACCGACTCCACTTTCGACACG CGCCCTGCAGGACTACTTCACCACCGAGAACCCCTTCATCTTGGAGCTTG AGGACCACATCGGAAAGAGGGACGCCGCCGTGGTTCGTGATTTTTACGAA AGGCCTCGATTCCGCGGGGCCACCACCCCGCTCTCGCACGAGACGCAGCT GGAACACGAGCGCATCTTCAAGACGGAGGTCGACCGACTCCTTGGAGCCG CCGGCGAGGAGAGCGCCAACGGGGCCGAACGACCTGCTGCGGACACGAAG GGAGAAGCCGAACGCGCGATCGCCGCGGGTGGTCCAGCATCGAAGGACCT TGCGGAGGGGTCTCTTGGTGCTGCTCGGAGTAGACGATTCCCTGGAGAGG TGGTCGTTGACGGCTCGACGTCTGTTTCTGAGGAAGCCGACACGAGGGAG GAGGCGGACGGTGGTGGAGGTGGCAGTGACTCAAACGAAGAGGTTCACGG ATTGCGGCGGCTGACGGAGCTGTTCGATCCGGACGGCGAAGATCGCCTGC TCGCCGGGAAGTTCGCCTCCGTCGTTGGCCGCATCGGGCGGGAAGGACGG CAAAAAGTCGCG
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Coding sequence (CDS) from alignment at Ecto-sp8_S_contig10755:4313..6724+

>mRNA_Ecto-sp8_S_contig10755.1135.1 ID=mRNA_Ecto-sp8_S_contig10755.1135.1|Name=mRNA_Ecto-sp8_S_contig10755.1135.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=1335bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10755:4313..6724+ (Ectocarpus species8 EcLAC_412)
ATGGAAAGAACACGAGTTGCTGGGAGGAAACGTGCGAGACCAACGCCTTC
TCTGCGATGCTACATCGTAGACGACCACTGCGATGCCTTGAGCAAAATAC
ACAGAGCTATCCGAAACGGCGCGTTGCCCTTCACGGGCCTTTCGGCTGTC
CATTTCGATGCCCACCCGGACTTGATGGTGACACCCGACATGCCCGCAGA
GACTTGCTTCCGGCCCCACGAACTCTACGACACCCTGGCCCGGACAGAGG
GAGGTATCGCAGAGTGGATCCTACCGTTAGTATACCAGGGTCACCTTTCC
ACCCTGTGGTGGGTGAGACCGCGTTGGGCCAGGCAGTTCACTGACGGGGA
TCATCGTTTTTGCGTCGGCCAGGTGAAGGCCACAGGGAAGCTTCGAGTAT
CCTCGACCGCACCCTATTTCGTCGACGACAGACTCTACTGCCGCGAGGAG
GACATGCAGGAATGCAAACCCCTGCACCTGTGCGTCAGCCTCGTCCCCGA
CAACCTGCCGTCTCCAGCGGAGTGTCTCACTGGGGCCGAGCTGCAGGCGG
GTTCGGTTCGCCCGCAGAACCGCGTGGGCGCCCAAGCAGATGCTAGCGAT
GGAGCGAAGTCGCCAACCGTCGCGCATGGAAACGGCGACGGGACGGACAA
AACGGAGGGTGCGCGTGTGGCAGAAGAAACGGCTTGTTCGACGAGATTCA
CGATCTCAACTGTACCACAGCAGTCGGAGAAATCTCAAGGCGGCTGCAGC
CGACCAACGCCGTGGGTACTGGACATCTGCTTGGACTACTTCACCACCGA
GAACCCCTTCATCTTGGAGCTTGAGGACCACATCGGAAAGAGGGACGCCG
CCGTGGTTCGTGATTTTTACGAAAGGCCTCGATTCCGCGGGGCCACCACC
CCGCTCTCGCACGAGACGCAGCTGGAACACGAGCGCATCTTCAAGACGGA
GGTCGACCGACTCCTTGGAGCCGCCGGCGAGGAGAGCGCCAACGGGGCCG
AACGACCTGCTGCGGACACGAAGGGAGAAGCCGAACGCGCGATCGCCGCG
GGTGGTCCAGCATCGAAGGACCTTGCGGAGGGGTCTCTTGGTGCTGCTCG
GAGTAGACGATTCCCTGGAGAGGTGGTCGTTGACGGCTCGACGTCTGTTT
CTGAGGAAGCCGACACGAGGGAGGAGGCGGACGGTGGTGGAGGTGGCAGT
GACTCAAACGAAGAGGTTCACGGATTGCGGCGGCTGACGGAGCTGTTCGA
TCCGGACGGCGAAGATCGCCTGCTCGCCGGGAAGTTCGCCTCCGTCGTTG
GCCGCATCGGGCGGGAAGGACGGCAAAAAGTCGCG
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