mRNA_Ecto-sp8_S_contig10755.1135.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig10755.1135.1 vs. uniprot
Match: D8LI72_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LI72_ECTSI) HSP 1 Score: 659 bits (1699), Expect = 1.320e-234 Identity = 348/445 (78.20%), Postives = 354/445 (79.55%), Query Frame = 1
Query: 1 MERTRVAGRKRARPTPSLRCYIVDDHCDALSKIHRAIRNGALPFTGLSAVHFDAHPDLMVTPDMPAETCFRPHELYDTLARTEGGIAEWILPLVYQGHLSTLWWVRPRWARQFTDGDHRFCVGQVKATGKLRVSSTAPYFVDDRLYCREEDMQECKPLHLCVSLVPDNLPSPAECLTGAELQAGSVRPQNRVGAQADASDGAKSPTVAHGNGDGTDKTEGARVAEETACSTRFTISTVPQQSEKSQGGCSRPTPWVLDICLDYFTTENPFILELEDHIGKRDAAVVRDFYERPRFRGATTPLSHETQLEHERIFKTEVDRLLGAAGEESANGAERPAADTKGEAERAIAAGGPASKDLAEGSLGAARSRRFPGEVVVDGSTSVSEEADTREEADGGGXGSDSNEEVHGLRRLTELFDPDGEDRLLAGKFASVVGRIGREGRQKVA 1335
MERTRVAGRKRARPTPSLRCYIVDDHCDALSKIHRAIRNGALPFTGLSAVHFDAHPDLMVTPDMPAETCFRPHELYDTLA+TEGGIAEWILPLVYQGHLSTLWWVRPRWARQFTDGDHRFCVGQVKATGKLRVSSTAPYFVDDRLYCREEDM ECKPLHLCVSLVPDNLPSPAECLTGAELQ DYFTTENPFILELEDH+GKRDAAVVRDFY RPRFRGA TPL HETQLEHE IFKTEVDRLLGAAGEESANGAE+PAADTKGEAERAI AGG ASKDLAEGS GAARS RFPGEVVVDGST VSEEADTREEADGGG GS +++EVHGLRRLTELFDPDGEDRLLAGKFASVVGRIGREGRQKVA
Sbjct: 1 MERTRVAGRKRARPTPSLRCYIVDDHCDALSKIHRAIRNGALPFTGLSAVHFDAHPDLMVTPDMPAETCFRPHELYDTLAQTEGGIAEWILPLVYQGHLSTLWWVRPRWARQFTDGDHRFCVGQVKATGKLRVSSTAPYFVDDRLYCREEDMHECKPLHLCVSLVPDNLPSPAECLTGAELQ-------------------------------------------------------------------------------DYFTTENPFILELEDHLGKRDAAVVRDFYGRPRFRGAATPLPHETQLEHEHIFKTEVDRLLGAAGEESANGAEQPAADTKGEAERAIVAGGTASKDLAEGSPGAARSGRFPGEVVVDGSTPVSEEADTREEADGGGGGSGASQEVHGLRRLTELFDPDGEDRLLAGKFASVVGRIGREGRQKVA 366
BLAST of mRNA_Ecto-sp8_S_contig10755.1135.1 vs. uniprot
Match: A0A024UGZ0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UGZ0_9STRA) HSP 1 Score: 166 bits (419), Expect = 1.180e-43 Identity = 109/295 (36.95%), Postives = 140/295 (47.46%), Query Frame = 1
Query: 52 LRCYIVDDHCDALSKIHRAIRNGALPFTGLSAVHFDAHPDLMVTPDMPAETCFRPHELYDTLARTEGGIAEWILPLVYQGHLSTLWWVRPRWARQFTDGDHRFCVGQVKATGKLRVSSTAPYFVDDRLYCREEDMQECKPLHLCVSLVPDNLPSPAECLTGAELQAGSVRPQNRVGAQADASDGAKSPTVAHGNGDGTDKTEGARVAEETACSTRFTISTVPQQSEKSQGGCSRPTPWVLDICLDYFTTENPFILELEDHIGKRDAAVVRDFYERPRFRGATTPLSHETQLEHER 936
+R +VDDH AL IH+AIR LPF + VHFDAHPDL D+PA++ F P +LYD L +E GIA ++LPL + GH+ +L WV+P WA+Q T GD F VG+ G L V+S YFVD+ +Y E ++ + + L L V + D SPA SVRP +G P+VLDICLDYFTT NPF+ E E G DA V+R Y +F+ LSH QLEH R
Sbjct: 5 MRVVVVDDHHHALEPIHQAIRRRVLPFANWTLVHFDAHPDLAFPRDVPAKSVFTPSQLYDVLDASEAGIASFVLPLSFAGHMESLIWVKPPWAQQMTLGDQAFAVGEHIDNGTLCVTSNHSYFVDEAMYAPESELTKKQTLQLTVCELHD---SPAS----------SVRPP--LG------------------------------------------------------------PFVLDICLDYFTTLNPFLHEFEKACGVDDAQVLRHIYGGLQFKNIPPTLSHAQQLEHHR 224
BLAST of mRNA_Ecto-sp8_S_contig10755.1135.1 vs. uniprot
Match: A0A485KQ73_9STRA (Aste57867_10189 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KQ73_9STRA) HSP 1 Score: 159 bits (403), Expect = 3.460e-41 Identity = 103/301 (34.22%), Postives = 137/301 (45.51%), Query Frame = 1
Query: 64 IVDDHCDALSKIHRAIRNGALPFTGLSAVHFDAHPDLMVTPDMPAETCFRPHELYDTLARTEGGIAEWILPLVYQGHLSTLWWVRPRWARQFTDGDHRFCVGQVKATGKLRVSSTAPYFVDDRLYCREEDMQECKPLHLCVSLVPDNLPSPAECLTGAELQAGSVRPQNRVGAQADASDGAKSPTVAHGNGDGTDKTEGARVAEETACSTRFTISTVPQQSEKSQGGCSRPTPWVLDICLDYFTTENPFILELEDHIGKRDAAVVRDFYERPRFRGATTPLSHETQLEHERIFKTEVDRLL 966
+VDDH L IH+AIR LPF+ + VHFDAHPDL +PA+ F P YD L +E GIA ++LPLVY GH+ L WV+P WA Q G F VG+ ATG+LRVSS YFVD+ +Y ++ + + LHL V EL +GS+ P A AD P+VLDICLDYF T NPF + G D ++R Y F+ A++ LSH + EH+ + +DR++
Sbjct: 8 VVDDHHHVLEPIHKAIRKRILPFSNWNMVHFDAHPDLAFPRSIPADRIFAPFAFYDDLDESEAGIASFLLPLVYAGHMKNLVWVKPPWATQMLLGHEEFTVGRHDATGELRVSSQHTYFVDEVMYANPTELSKAQTLHLSV----------------CELGSGSMPP-----APAD--------------------------------------------------------PYVLDICLDYFATINPFQKAFDAACGVEDGQLLRFIYGNLAFKTASSTLSHVEKREHQALHAAFLDRII 231
BLAST of mRNA_Ecto-sp8_S_contig10755.1135.1 vs. uniprot
Match: T0QNM0_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QNM0_SAPDV) HSP 1 Score: 154 bits (389), Expect = 3.580e-39 Identity = 102/302 (33.77%), Postives = 133/302 (44.04%), Query Frame = 1
Query: 61 YIVDDHCDALSKIHRAIRNGALPFTGLSAVHFDAHPDLMVTPDMPAETCFRPHELYDTLARTEGGIAEWILPLVYQGHLSTLWWVRPRWARQFTDGDHRFCVGQVKATGKLRVSSTAPYFVDDRLYCREEDMQECKPLHLCVSLVPDNLPSPAECLTGAELQAGSVRPQNRVGAQADASDGAKSPTVAHGNGDGTDKTEGARVAEETACSTRFTISTVPQQSEKSQGGCSRPTPWVLDICLDYFTTENPFILELEDHIGKRDAAVVRDFYERPRFRGATTPLSHETQLEHERIFKTEVDRLL 966
++VDDH L IHRAIR LPF + VH DAH DL P +PA T F P LYD L +E GIA ++LPL Y GH+ L W++P WA Q G H F VGQ KATG L V+S YF+D+ LY + + + L L V AEL A V EG P+VLDICLDYF+T NPF ++ +G+ A+++ Y ++ T L H T+LEH R+F + + L
Sbjct: 7 HVVDDHHHVLEPIHRAIRQRRLPFANFTIVHLDAHADLAFPPSLPAATIFSPDALYDGLDASEAGIASFLLPLAYAGHMHRLVWIKPPWATQMAIGTHAFDVGQHKATGCLGVTSHESYFIDENLYAPRDALDKPASLELTV----------------AELPAAPVP-------------------------------EG---------------------------------PYVLDICLDYFSTLNPFRQDITRAMGEDTASLLSCIYGDLSYKKKTVELPHSTRLEHGRLFASTIKTLF 228
BLAST of mRNA_Ecto-sp8_S_contig10755.1135.1 vs. uniprot
Match: A0A835Z3T2_9STRA (UPF0489 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3T2_9STRA) HSP 1 Score: 142 bits (357), Expect = 6.950e-37 Identity = 65/119 (54.62%), Postives = 84/119 (70.59%), Query Frame = 1
Query: 34 ARPTPSLRCYIVDDHCDALSKIHRAIRNGALPFTGLSAVHFDAHPDLMVTPDMPAETCFRPHELYDTLARTEGGIAEWILPLVYQGHLSTLWWVRPRWARQFTDGDHRFCVGQVKATGK 390
A P++ C++V+DH DAL H A+R L G++ VH DAHPDL VT DM A+ CF+P LYD L + GGIAEWI+PLVY+GHL T+WW+RP WA QFTDG + VG+ +ATG+
Sbjct: 10 AAAAPTIPCHVVEDHHDALPFWHLAMRRKRLAQQGITMVHIDAHPDLCVTEDMQADICFQPRALYDALDNSVGGIAEWIIPLVYEGHLDTIWWLRPPWADQFTDGTYALGVGKSQATGE 128
BLAST of mRNA_Ecto-sp8_S_contig10755.1135.1 vs. uniprot
Match: A0A1V9Z4E5_9STRA (UPF0489 protein C5orf22-like n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z4E5_9STRA) HSP 1 Score: 146 bits (368), Expect = 3.330e-36 Identity = 102/302 (33.77%), Postives = 129/302 (42.72%), Query Frame = 1
Query: 61 YIVDDHCDALSKIHRAIRNGALPFTGLSAVHFDAHPDLMVTPDMPAETCFRPHELYDTLARTEGGIAEWILPLVYQGHLSTLWWVRPRWARQFTDGDHRFCVGQVKATGKLRVSSTAPYFVDDRLYCREEDMQECKPLHLCVSLVPDNLPSPAECLTGAELQAGSVRPQNRVGAQADASDGAKSPTVAHGNGDGTDKTEGARVAEETACSTRFTISTVPQQSEKSQGGCSRPTPWVLDICLDYFTTENPFILELEDHIGKRDAAVVRDFYERPRFRGATTPLSHETQLEHERIFKTEVDRLL 966
Y+VDDH H AIR LPF+ ++ VH DAHPDL +PA T F P LYD L ++ GIA ++LPL Y GHL L WV+P WA Q GDH F VG T VSS YFVD+ L+ R E + E KPL L V AEL A A +PT + +VLDICLDYF+T NPF+ +L G AA+VR Y ++ + HE L H R+F + + +
Sbjct: 11 YVVDDH-------HHAIRRRLLPFSNVTIVHLDAHPDLAFPRSIPAATIFAPEALYDALDASDAGIASFLLPLAYAGHLRHLVWVKPPWATQMATGDHEFLVG----TDACAVSSHEAYFVDEDLFARAETLSEAKPLSLTV----------------AELPA------------------APTPTA---------------------------------------------SSFVLDICLDYFSTHNPFLQDLVAAKGPTTAALVRSVYCGLLYKCVPAAVPHEVALAHRRLFASTMTTIF 222
BLAST of mRNA_Ecto-sp8_S_contig10755.1135.1 vs. uniprot
Match: A0A2R5G5M2_9STRA (UPF0489 protein C5orf22 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G5M2_9STRA) HSP 1 Score: 146 bits (369), Expect = 1.960e-35 Identity = 95/289 (32.87%), Postives = 129/289 (44.64%), Query Frame = 1
Query: 49 SLRCYIVDDHCDALSKIHRAIRNGALPFTGLSAVHFDAHPDLMVTPDMPAETCFRPHELYDTLARTEGGIAEWILPLVYQGHLSTLWWVRPRWARQFTDGDHRFCVGQVKAT---------------GKLRVSSTAPYFVDDRLYCREEDMQECKPLHLCVSLVPDNLPSPAECLTGAELQAGSVRPQNRVGAQADASDGAKSPTVAHGNGDGTDKTEGARVAEETACSTRFTISTVPQQSEKSQGGCSRPTPWVLDICLDYFTTENPFILELEDHIGKRDAAVVRDFY 870
+L Y+ DH +AL +H AIR G + F+GL+ +H D+HPDLMV P MPA+ F+P EL+ LA++E GIAE+ILP VY GHL L W+RP WA Q DG F VG+ G LRV+ PY+ D+ L C ED+Q K + + V+ A C A +Q C R PWVLDICLDYF+ NPF ++L+ +G + A + ++ Y
Sbjct: 41 TLPVYVSGDHNEALESLHAAIRVGEVAFSGLAMLHVDSHPDLMVPPRMPADLVFKPRELHWELAKSETGIAEFILPAVYAGHLERLVWLRPTWADQLPDGQWEFKVGKAPGCSADEIITEDDERVNGGPLRVTWRTPYYEDEGLTCPVEDLQGAKSVEILVA-------GAATCTPQAFVQ---------------------------------------------VCGDR---------------------PWVLDICLDYFSVNNPFYVDLQTKLGVKAATLCQEVY 256
BLAST of mRNA_Ecto-sp8_S_contig10755.1135.1 vs. uniprot
Match: A0A1V9ZZD1_9STRA (UPF0489 protein C5orf22-like n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZZD1_9STRA) HSP 1 Score: 142 bits (359), Expect = 6.920e-35 Identity = 93/306 (30.39%), Postives = 141/306 (46.08%), Query Frame = 1
Query: 52 LRCYIVDDHCDALSKIHRAIRNGALPFTGLSAVHFDAHPDLMVTPDMPAETCFRPHELYDTLARTEGGIAEWILPLVYQGHLSTLWWVRPRWARQFTDGDHRFCVGQVKATGKLRVSSTAPYFVDDRLYCREEDMQECKPLHLCVSLVPDNLPSPAECLTGAELQAGSVRPQNRVGAQADASDGAKSPTVAHGNGDGTDKTEGARVAEETACSTRFTISTVPQQSE-KSQGGCSRPTPWVLDICLDYFTTENPFILELEDHIGKRDAAVVRDFYERPRFRGATTPLSHETQLEHERIFKTEVDRLL 966
L ++VDDH L IH+AIR LPF + +HFDAH DL +PA+ FRP LYD L ++ GIA ++LPLVY GH++ L WV+P WA+Q G F VG+ + LR++S YFV++ LY ++ + K ++ SLV + T++ +P Q K Q ++LDICLDYF+T NPF EL+ +G++ ++R Y ++ + L H+ QLEH + F + ++ +L
Sbjct: 4 LEVHVVDDHHHVLEPIHKAIRRRVLPFNEFAIIHFDAHADLAFPNTLPADVIFRPENLYDELDASDAGIASFLLPLVYAGHMTKLIWVKPPWAKQMALGTQDFVVGKHLTSECLRLTSKETYFVEEGLYAPLNELTKTKSMNN--SLV------------------------------------------------------------------QLTVAELPMQVNLKGQA-------YILDICLDYFSTLNPFFEELKPALGEQKTLLIRRIYCGLCYKKSELLLPHDVQLEHYKKFSSTINTIL 234
BLAST of mRNA_Ecto-sp8_S_contig10755.1135.1 vs. uniprot
Match: UPI001864173D (UPF0489 protein C5orf22 homolog isoform X1 n=3 Tax=Megalops cyprinoides TaxID=118141 RepID=UPI001864173D) HSP 1 Score: 139 bits (351), Expect = 3.740e-33 Identity = 94/280 (33.57%), Postives = 148/280 (52.86%), Query Frame = 1
Query: 61 YIVDDHCDALSKIHRAIRNGALPFTGLSAVHFDAHPDLMVTPDMPAETCFRPHELYDTLARTEGGIAEWILPLVYQGHLSTLWWVRPRWARQFTDGDHRFCVGQVKATGKLRVSSTAPYFVDDRLYCREEDMQECKPLHLCVSLVPDNLPSPAECLTGAELQAGSV-RPQNR-VGAQADASDGAKSPT----VAHGNGDGTDKTEGARVAEETACSTRFTISTVPQQSEKSQGGCS---RPTP-WVLDICLDYFTTENPFILELEDHIGKRDAAVVRDFY 870
+IV+DH D + I+RAI + LP + VH D+HPDL++ +MPA+T F L+ L+ I WI+P+VY GH+S + W+ P WA+Q +G+H CVG+ +T +RV+ST YF+ D LY + ++E KPL L V V P+ EC G E Q RP+ + V A+ D + G+ + G T + G E+ + T + K+ G S PT ++LDI LD+F+ +NPF ++ + + A++++ Y
Sbjct: 16 WIVEDHNDVVPYIYRAIASRHLPMKNIKMVHLDSHPDLLIAVNMPADTVFDKEALFSELS-----IENWIMPMVYAGHVSHVMWLHPYWAQQIREGEHSMCVGRDASTTTIRVTSTDDYFLSDGLYVPSDQLEEPKPLRLSVIRVT---PAEEECGRGEETQERPTKRPRTQTVKAEEDGAAGSSQAACDCRLQPPGGSRTSASNGFGSGEK--------LQTQADSTTKAVAGLSSAIEPTDSFILDIDLDFFSCKNPF----KEMYSQEEYAILQELY 275
BLAST of mRNA_Ecto-sp8_S_contig10755.1135.1 vs. uniprot
Match: UPI0009076903 (UPF0489 protein C5orf22 homolog isoform X3 n=3 Tax=Crocodylia TaxID=1294634 RepID=UPI0009076903) HSP 1 Score: 137 bits (346), Expect = 5.310e-33 Identity = 102/301 (33.89%), Postives = 157/301 (52.16%), Query Frame = 1
Query: 22 GRKRARPTPSLRCYIVDDHCDALSKIHRAIRNGALPFTGLSAVHFDAHPDLMVTPDMPAETCFRPHELYDTLARTEGGIAEWILPLVYQGHLSTLWWVRPRWARQFTDGDHRFCVGQVKATGKLRVSSTAPYFVDDRLYCREEDMQECKPLHLCVSLVPDNLPSPAECLTGAELQAGSVRPQNRVGAQADASDGAKSPTVAHGN---GDGTDKTEGARVAEETACSTRFTISTVPQQSEKSQG--GCS-------------RPTPWVLDICLDYFTTENPFILELEDHIGKRDAAVVRDFY 870
GR R R P+L ++V+DH D L I+RAI + LP + +S VHFD+HPDL++ +MPA+T F L+ L+ I WI+P+VY GH+S + W+ P WA+Q +G H F VG+ +T +RV+ST YF+ D LY + ++ K LHL V LV PS + +A S + ++ A+ + +PT + G G TE A EE AC+ T + + + S G GC + +VLDI LD+F+ +NPF +D + + ++++ Y
Sbjct: 9 GRGRLRTYPALPVWVVEDHHDVLPFIYRAIGSKHLPASNISFVHFDSHPDLLIPVNMPADTVFDKEALFSELS-----IENWIMPVVYAGHISQVVWLHPIWAQQIKEGRHDFLVGKDTSTTTIRVTSTDHYFLSDGLYVPADQLENQKLLHLNVLLVK---PSETSKQQDDKNEASSAK---KLKLNAEDTANTATPTSSQGLEIVGHYLTDTE-APGDEENACAQDKTETFLESSASCSLGSNGCKPIEMVNDVLQVVQKGDAYVLDIDLDFFSVKNPF----KDTYTQEEYKILQELY 293 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig10755.1135.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig10755.1135.1 >prot_Ecto-sp8_S_contig10755.1135.1 ID=prot_Ecto-sp8_S_contig10755.1135.1|Name=mRNA_Ecto-sp8_S_contig10755.1135.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=445bp MERTRVAGRKRARPTPSLRCYIVDDHCDALSKIHRAIRNGALPFTGLSAVback to top mRNA from alignment at Ecto-sp8_S_contig10755:4313..6724+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig10755.1135.1 ID=mRNA_Ecto-sp8_S_contig10755.1135.1|Name=mRNA_Ecto-sp8_S_contig10755.1135.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=2412bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10755:4313..6724+ (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig10755:4313..6724+ >mRNA_Ecto-sp8_S_contig10755.1135.1 ID=mRNA_Ecto-sp8_S_contig10755.1135.1|Name=mRNA_Ecto-sp8_S_contig10755.1135.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=1335bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10755:4313..6724+ (Ectocarpus species8 EcLAC_412)back to top |