mRNA_Ecto-sp8_S_contig10751.1130.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig10751.1130.1 vs. uniprot
Match: D8LFH4_ECTSI (Short-chain dehydrogenase/reductase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFH4_ECTSI) HSP 1 Score: 339 bits (869), Expect = 7.790e-113 Identity = 199/250 (79.60%), Postives = 201/250 (80.40%), Query Frame = 1
Query: 10 MMLRKPCRIAVATVALLTPEAGAFYTMPPPITTTNRVTSMLSRPSAATRQRHPISSTCRRRSLAPLRMAXXXXXXXXXXXXDDLRGKVAVVTGSSRGIGKGIAVTLGQRGCTVYVTGRSVGGNTTDKA-RGSLEETAAEIEAAGGKGIPVACDHAKDEQVKALFERVESEQGRLDILVNNAFALGPGDQLQAKFWTQGADAWDSLITVGLRSHYMASCFAAPLMIKSVKDRGGKPGLIACVSSFGGLTYS 756
++LRKPCRIAVATV LL PEAGAFYTM XXXXXXXXXXXX DLRGKVAVVTGSSRGIGKGIAVTLGQRGCTVYVTGRSVGGNTTDK GSLEETAAEIEAAGGKGIPVACDHAKDEQVKALFERVESEQGRLDILVNNAFALGPGDQLQAKFWTQGADAWDSLITVGLRSHYMASCFAAPLMIKSVKDRGGKPGLIACVSSFGGL YS
Sbjct: 4 LLLRKPCRIAVATVVLLAPEAGAFYTMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLRGKVAVVTGSSRGIGKGIAVTLGQRGCTVYVTGRSVGGNTTDKEIGGSLEETAAEIEAAGGKGIPVACDHAKDEQVKALFERVESEQGRLDILVNNAFALGPGDQLQAKFWTQGADAWDSLITVGLRSHYMASCFAAPLMIKSVKDRGGKPGLIACVSSFGGLAYS 253
BLAST of mRNA_Ecto-sp8_S_contig10751.1130.1 vs. uniprot
Match: D8LFI0_ECTSI (Oxidoreductase, short chain dehydrogenase/reductase family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFI0_ECTSI) HSP 1 Score: 320 bits (819), Expect = 1.390e-108 Identity = 163/168 (97.02%), Postives = 165/168 (98.21%), Query Frame = 1
Query: 256 DLRGKVAVVTGSSRGIGKGIAVTLGQRGCTVYVTGRSVGGNTTDKA-RGSLEETAAEIEAAGGKGIPVACDHAKDEQVKALFERVESEQGRLDILVNNAFALGPGDQLQAKFWTQGADAWDSLITVGLRSHYMASCFAAPLMIKSVKDRGGKPGLIACVSSFGGLTYS 756
DLRGKVAVVTGSSRGIGKGIAVTLGQRGCTVYVTGRSVGGNTTDK GSLEETAAEIEAAGGKGIPVACDHAKDEQVKALFE+VESEQGRLDILVNNAFALGPGDQLQAKFWTQGADAWDSLITVGLRSHY+ASCFAAPLMIKSVKDRGGKPGLIACVSSFGGLTYS
Sbjct: 16 DLRGKVAVVTGSSRGIGKGIAVTLGQRGCTVYVTGRSVGGNTTDKEIGGSLEETAAEIEAAGGKGIPVACDHAKDEQVKALFEKVESEQGRLDILVNNAFALGPGDQLQAKFWTQGADAWDSLITVGLRSHYVASCFAAPLMIKSVKDRGGKPGLIACVSSFGGLTYS 183
BLAST of mRNA_Ecto-sp8_S_contig10751.1130.1 vs. uniprot
Match: A0A7S3USF7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3USF7_HETAK) HSP 1 Score: 182 bits (462), Expect = 3.570e-52 Identity = 97/176 (55.11%), Postives = 125/176 (71.02%), Query Frame = 1
Query: 259 LRGKVAVVTGSSRGIGKGIAVTLGQRGCTVYVTGRSVGGNTTDKARGSLEETAAEIEAAGGKGIPVACDHAKDEQVKALFERVESEQGRLDILVNNAFALGPGDQLQAKFWTQGADAWDSLITVGLRSHYMASCFAAPLMIKS---VKDRGGKPG-------LIACVSSFGGLTYS 756
L G+VAVVTG+SRGIGKG+A+ L +RG TVY+TGRS+ D G+L +T AEI+AAGGK IP+ CDHA DEQ +A+FE+V+S +GRLDILVNNAFA+ L FW QGA+ WD+ TVGLRSHY+ SC A P+M+++ V+ G G LI +SSFGGL+Y+
Sbjct: 30 LDGQVAVVTGASRGIGKGVAIALAERGATVYITGRSLD-FPADPLGGTLRQTQAEIQAAGGKCIPIKCDHANDEQTRAVFEQVQSREGRLDILVNNAFAIPKQKDLFTNFWEQGAEIWDACHTVGLRSHYLCSCHAVPVMLQNPPLVQGARGDFGGGRKTNPLIVGISSFGGLSYT 204
BLAST of mRNA_Ecto-sp8_S_contig10751.1130.1 vs. uniprot
Match: A0A428ZNU2_KIBAR (Short-chain dehydrogenase n=1 Tax=Kibdelosporangium aridum TaxID=2030 RepID=A0A428ZNU2_KIBAR) HSP 1 Score: 168 bits (425), Expect = 1.590e-47 Identity = 92/167 (55.09%), Postives = 116/167 (69.46%), Query Frame = 1
Query: 259 LRGKVAVVTGSSRGIGKGIAVTLGQRGCTVYVTGRSVGGNTTDKARGSLEETAAEIEAAGGKGIPVACDHAKDEQVKALFERVESEQGRLDILVNNAFALGP-GDQLQAKFWTQGADAWDSLITVGLRSHYMASCFAAPLMIKSVKDRGGKPGLIACVSSFGGLTYS 756
L GKVAVVTG+SRG+GKGIA+ LG G VY+TGR+V T G++ ETAAE+ A GG+GI +ACDH D+QVKA+F R+E+E GRLDILVNN F+ L FWT +AWD +I +GLRSHY+AS FA PL++K+ DR P +I +SS G TYS
Sbjct: 5 LAGKVAVVTGASRGVGKGIALELGAAGAVVYLTGRTV---TAGPLPGTIAETAAEVTALGGQGIAIACDHRDDDQVKAVFARLEAEHGRLDILVNNVFSAADIAPWLNRPFWTLPVEAWDQVIDIGLRSHYVASVFAVPLLMKA--DR---PAVIVNISSPGATTYS 163
BLAST of mRNA_Ecto-sp8_S_contig10751.1130.1 vs. uniprot
Match: A0A2D6BHG0_9DELT (Short-chain dehydrogenase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A2D6BHG0_9DELT) HSP 1 Score: 166 bits (421), Expect = 6.490e-47 Identity = 84/165 (50.91%), Postives = 111/165 (67.27%), Query Frame = 1
Query: 259 LRGKVAVVTGSSRGIGKGIAVTLGQRGCTVYVTGRSVGGNTTDKARGSLEETAAEIEAAGGKGIPVACDHAKDEQVKALFERVESEQGRLDILVNNAFALGPGDQLQAKFWTQGADAWDSLITVGLRSHYMASCFAAPLMIKSVKDRGGKPGLIACVSSFGGLTY 753
L G++A+VTGSSRG+GKGIA+ LG+ G TVYVTGR++ ++ G++ TA E+ GGKGIPV CDH++DE++KAL ERV SEQGR+DIL+NN F L + + KFW WD L+ VG R HY+AS AP+M++ K GLI +SSF G Y
Sbjct: 6 LAGQIAIVTGSSRGVGKGIALELGEAGATVYVTGRTLD-DSQSYVPGTIGATADEVTRLGGKGIPVRCDHSRDEEIKALIERVHSEQGRIDILINNVFTLPSENVFEGKFWEHSIQLWDDLLQVGCRGHYVASHAVAPIMVEQ------KGGLIVNISSFAGAAY 163
BLAST of mRNA_Ecto-sp8_S_contig10751.1130.1 vs. uniprot
Match: A0A210PNA7_MIZYE (Dehydrogenase/reductase SDR family member 1 n=2 Tax=Mizuhopecten yessoensis TaxID=6573 RepID=A0A210PNA7_MIZYE) HSP 1 Score: 165 bits (417), Expect = 9.780e-47 Identity = 88/168 (52.38%), Postives = 117/168 (69.64%), Query Frame = 1
Query: 259 LRGKVAVVTGSSRGIGKGIAVTLGQRGCTVYVTGRSVGGNTTDKARGSLEETAAEIEAAGGKGIPVACDHAKDEQVKALFERVESEQ-GRLDILVNNAFALGPG--DQLQAKFWTQGADAWDSLITVGLRSHYMASCFAAPLMIKSVKDRGGKPGLIACVSSFGGLTY 753
L GKV +VTG++RGIGKGIA+ LG+ G TVY+TGR++ K GSL +TA EIE GGK IPV CDH KDE+++ LF++V+ EQ G+LDILVNNAF DQ++ FW Q D WD++ VGLR+HY+ + +AA +M+ ++RG LI +SS GGLTY
Sbjct: 21 LAGKVCIVTGATRGIGKGIALQLGEAGATVYITGRTLVAAKDSKVGGSLTDTAREIEERGGKCIPVQCDHTKDEEIQQLFDKVKREQEGQLDILVNNAFNAAKAIFDQMKVPFWEQPMDMWDTVNNVGLRNHYLCTVYAAKMMVP--RNRG----LIVTISSIGGLTY 182
BLAST of mRNA_Ecto-sp8_S_contig10751.1130.1 vs. uniprot
Match: B3RV93_TRIAD (Uncharacterized protein n=2 Tax=Trichoplax TaxID=10227 RepID=B3RV93_TRIAD) HSP 1 Score: 163 bits (413), Expect = 1.860e-45 Identity = 91/168 (54.17%), Postives = 115/168 (68.45%), Query Frame = 1
Query: 259 LRGKVAVVTGSSRGIGKGIAVTLGQRGCTVYVTGRSVGGNTTDKARGSLEETAAEIEAAGGKGIPVACDHAKDEQVKALFERVESEQ-GRLDILVNNAFALGPG--DQLQAKFWTQGADAWDSLITVGLRSHYMASCFAAPLMIKSVKDRGGKPGLIACVSSFGGLTY 753
L+GKV +VTG++RGIGKGIAV LG+ G TVY+TGR++ GSL+ETA EI+AAGGKGIP+ CDH+KDE + LF + EQ GRLDILVNNA+A D Q KFW Q + WD++ VGLR+HY+A+C A+ LM+ K GLI +SS GGL Y
Sbjct: 4 LQGKVCLVTGATRGIGKGIAVILGEEGATVYITGRTL--EAKPGLSGSLKETAQEIDAAGGKGIPIQCDHSKDEDIAKLFATIAKEQDGRLDILVNNAYAGVQAIFDNSQKKFWEQPDNMWDTINGVGLRAHYIATCHASRLMVPR------KQGLIVNISSAGGLRY 163
BLAST of mRNA_Ecto-sp8_S_contig10751.1130.1 vs. uniprot
Match: A0A8B7ZCK3_ACAPL (dehydrogenase/reductase SDR family member 1-like n=1 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7ZCK3_ACAPL) HSP 1 Score: 163 bits (412), Expect = 3.650e-45 Identity = 92/168 (54.76%), Postives = 112/168 (66.67%), Query Frame = 1
Query: 259 LRGKVAVVTGSSRGIGKGIAVTLGQRGCTVYVTGRSVGGNTTDKARGSLEETAAEIEAAGGKGIPVACDHAKDEQVKALFERVESEQ-GRLDILVNNAFALGPG--DQLQAKFWTQGADAWDSLITVGLRSHYMASCFAAPLMIKSVKDRGGKPGLIACVSSFGGLTY 753
L GKV +VTG+SRGIGKGIA+ LG+ G TVY+TGR++ N GSL ETA E+E GGK +PV CDH+ DEQVK+LFER+ EQ GRLD+LVNNAFA G + KFW WD + VGLRS+Y+A+ AA LMI + K GLI +SS GGL Y
Sbjct: 6 LSGKVCLVTGASRGIGKGIALQLGEAGATVYITGRTLNPNDDRAFPGSLRETAEEVEERGGKCVPVQCDHSDDEQVKSLFERISREQNGRLDLLVNNAFAGGKTLFESRDKKFWETPPTLWDDVTVVGLRSYYIAAWHAAQLMIPA------KQGLIVNISSIGGLHY 167
BLAST of mRNA_Ecto-sp8_S_contig10751.1130.1 vs. uniprot
Match: A0A1S3H765_LINUN (dehydrogenase/reductase SDR family member 1-like n=2 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3H765_LINUN) HSP 1 Score: 162 bits (411), Expect = 5.410e-45 Identity = 93/171 (54.39%), Postives = 118/171 (69.01%), Query Frame = 1
Query: 259 LRGKVAVVTGSSRGIGKGIAVTLGQRGCTVYVTGRSVGGNTTDKARGSLEETAAEIEAAGGKGIPVACDHAKDEQVKALFERVESEQ-GRLDILVNNAFA-----LGPGDQLQAKFWTQGADAWDSLITVGLRSHYMASCFAAPLMIKSVKDRGGKPGLIACVSSFGGLTY 753
L G+VAVVTG++RGIG+GIA+ LG+ G TVY+TGR++ K SLE TA EIE+ GGKGIPV CDH+KDE++KALF+RV++EQ GRLDILVNNA++ LG + FW Q + WD + VGLR+HY+ S +AA LMI K GLI +SS GGL Y
Sbjct: 7 LAGQVAVVTGATRGIGRGIALQLGEAGATVYITGRTLKSKGNSKL--SLEGTAEEIESRGGKGIPVQCDHSKDEEIKALFDRVKAEQHGRLDILVNNAYSAVERVLG---NINQPFWEQEPEIWDDVNNVGLRNHYVCSVYAARLMIPR------KRGLIVNISSMGGLNY 166
BLAST of mRNA_Ecto-sp8_S_contig10751.1130.1 vs. uniprot
Match: UPI001B88CD61 (dehydrogenase/reductase SDR family member 1-like n=1 Tax=Gigantopelta aegis TaxID=1735272 RepID=UPI001B88CD61) HSP 1 Score: 162 bits (410), Expect = 9.060e-45 Identity = 88/168 (52.38%), Postives = 115/168 (68.45%), Query Frame = 1
Query: 259 LRGKVAVVTGSSRGIGKGIAVTLGQRGCTVYVTGRSVGGNTTDKARGSLEETAAEIEAAGGKGIPVACDHAKDEQVKALFERVESEQ-GRLDILVNNAFAL--GPGDQLQAKFWTQGADAWDSLITVGLRSHYMASCFAAPLMIKSVKDRGGKPGLIACVSSFGGLTY 753
L+GK+ +VTG++RGIG+GIA+ LG+ G TVY+TGR++ D GSL +TAAEIE GG+ IP+ CDH+KDE VK LFERV+SEQ G+LD+LVNNA+A D + FW Q D WD++ VGLR+ YM + A+ LM+ S K GLI +SS GGL Y
Sbjct: 4 LKGKICLVTGATRGIGRGIALQLGEAGATVYITGRTLTTPPDDPVGGSLTDTAAEIEKRGGECIPIQCDHSKDEDVKKLFERVKSEQNGKLDLLVNNAYAAVSAIADHYKVPFWEQPLDIWDTVNNVGLRNTYMCAAHASKLMVPS------KQGLIVNISSAGGLVY 165 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig10751.1130.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig10751.1130.1 >prot_Ecto-sp8_S_contig10751.1130.1 ID=prot_Ecto-sp8_S_contig10751.1130.1|Name=mRNA_Ecto-sp8_S_contig10751.1130.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=250bp MMLRKPCRIAVATVALLTPEAGAFYTMPPPITTTNRVTSMLSRPSAATRQback to top mRNA from alignment at Ecto-sp8_S_contig10751:941..4794- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig10751.1130.1 ID=mRNA_Ecto-sp8_S_contig10751.1130.1|Name=mRNA_Ecto-sp8_S_contig10751.1130.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=3854bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10751:941..4794- (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig10751:941..4794- >mRNA_Ecto-sp8_S_contig10751.1130.1 ID=mRNA_Ecto-sp8_S_contig10751.1130.1|Name=mRNA_Ecto-sp8_S_contig10751.1130.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=750bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10751:941..4794- (Ectocarpus species8 EcLAC_412)back to top |