mRNA_Ecto-sp8_S_contig10736.1113.1 (mRNA) Ectocarpus species8 EcLAC_412

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp8_S_contig10736.1113.1
Unique NamemRNA_Ecto-sp8_S_contig10736.1113.1
TypemRNA
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Homology
BLAST of mRNA_Ecto-sp8_S_contig10736.1113.1 vs. uniprot
Match: D8LP70_ECTSI (Similar to aspartate beta-hydroxylase isoform a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP70_ECTSI)

HSP 1 Score: 418 bits (1075), Expect = 2.590e-148
Identity = 195/198 (98.48%), Postives = 198/198 (100.00%), Query Frame = 1
Query:    1 MPPVYGDVEMNGPFPSIETCRLQALCRTLKENIAVFTREFNAHKDTFMENPEKLGYGGRYGRIIVNREEQRFGNHFIDTRKILEASADYMRTQMFNSYANTYVMATSFTVLYPGASIRPHFGPTNYKYRIHLCIDIDGVGGIVTAYGTRCWRVGHIFILDDSYLHAGFYDGTRPRVILMVDIAKPGLTPEHMEHITSD 594
            MPPVYGDVEMNGPFPSIETCRLQALCRTL+ENIAVFTREFNAHKDTFM+NPEKLGYGGRYGRIIVNREEQRFGNHFIDTRKILEASADYMRTQMFN+YANTYVMATSFTVLYPGASIRPHFGPTNYKYRIHLCIDIDGVGGIVTAYGTRCWRVGHIFILDDSYLHAGFYDGTRPRVILMVDIAKPGLTPEHMEHITSD
Sbjct:    1 MPPVYGDVEMNGPFPSIETCRLQALCRTLEENIAVFTREFNAHKDTFMDNPEKLGYGGRYGRIIVNREEQRFGNHFIDTRKILEASADYMRTQMFNNYANTYVMATSFTVLYPGASIRPHFGPTNYKYRIHLCIDIDGVGGIVTAYGTRCWRVGHIFILDDSYLHAGFYDGTRPRVILMVDIAKPGLTPEHMEHITSD 198          
BLAST of mRNA_Ecto-sp8_S_contig10736.1113.1 vs. uniprot
Match: UPI000C254284 (aspartyl/asparaginyl beta-hydroxylase n=1 Tax=Leptinotarsa decemlineata TaxID=7539 RepID=UPI000C254284)

HSP 1 Score: 81.3 bits (199), Expect = 2.040e-14
Identity = 37/91 (40.66%), Postives = 56/91 (61.54%), Query Frame = 1
Query:  316 TSFTVLYPGASIRPHFGPTNYKYRIHLCIDIDGVGGIVTAYGTRCWRVGHIFILDDSYLHAGFYDGTRPRVILMVDIAKPGLTPEHMEHIT 588
            T F+V++PG  I PH GPTN + R HL + +     I  A  TR W+ G I + DDSY H  +++GT  R++L+VD+  P LTP   ++++
Sbjct:  650 TKFSVMHPGTHIWPHCGPTNCRLRTHLGLKVPPGTYIRVASETRSWKEGEILVFDDSYEHEVWHNGTEFRLVLIVDVWHPELTPSEKKNLS 740          
BLAST of mRNA_Ecto-sp8_S_contig10736.1113.1 vs. uniprot
Match: D7GY40_TRICA (Aspartyl/asparaginyl beta-hydroxylase-like Protein n=3 Tax=Tribolium castaneum TaxID=7070 RepID=D7GY40_TRICA)

HSP 1 Score: 80.9 bits (198), Expect = 2.860e-14
Identity = 35/84 (41.67%), Postives = 53/84 (63.10%), Query Frame = 1
Query:  316 TSFTVLYPGASIRPHFGPTNYKYRIHLCIDIDGVGGIVTAYGTRCWRVGHIFILDDSYLHAGFYDGTRPRVILMVDIAKPGLTP 567
            T F+V++PG  + PH GPTN + R+HL + +     I  A  TR W+ G + I DDS+ H  +++GT  R++L+VD+  P LTP
Sbjct:  786 TKFSVMHPGTHVWPHCGPTNCRLRVHLGLQVPANTFIRVAEKTRSWKEGEVLIFDDSFEHEVWHNGTSLRLVLIVDVWHPDLTP 869          
BLAST of mRNA_Ecto-sp8_S_contig10736.1113.1 vs. uniprot
Match: UPI001E28062E (aspartyl/asparaginyl beta-hydroxylase isoform X1 n=1 Tax=Colias crocea TaxID=72248 RepID=UPI001E28062E)

HSP 1 Score: 80.9 bits (198), Expect = 2.960e-14
Identity = 53/181 (29.28%), Postives = 86/181 (47.51%), Query Frame = 1
Query:   37 PFPSIETCRLQALCRTLKENIAVFTREFNAHKDTFMENPEKLGYGGRYGRIIVNREEQRFGNHFIDTRKI----LEASADYMRTQMFNSYANTYVMATSFTVLYPGASIRPHFGPTNYKYRIHLCIDIDGVGGIVTAYGTRCWRVGHIFILDDSYLHAGFYDGTRPRVILMVDIAKPGLTP 567
            P+ SI+      L + L+++     +E  A K  + +  E L   G + ++ +          F+  R+I     +A       Q   + A        F+++ PG  +RPH GPTN + R+HL +       I     TR W VG +FI DDS+ H  +++GT PR++L+VD+  P LTP
Sbjct:  912 PWWSIKETPYAKLAQALEKSWREILKEGLALKTLYEKEKEGLKERGEWSQLDI----------FVRGREIPGRCKKAPVTCSIVQQDTAAAGCRRGQIKFSLIDPGTHVRPHVGPTNCRLRMHLGLSNTKDTFIRVDKETRQWEVGKVFIFDDSFEHEVWHNGTAPRLVLIVDVWHPDLTP 1082          
BLAST of mRNA_Ecto-sp8_S_contig10736.1113.1 vs. uniprot
Match: UPI001CF72889 (aspartyl/asparaginyl beta-hydroxylase isoform X1 n=3 Tax=Tribolium madens TaxID=41895 RepID=UPI001CF72889)

HSP 1 Score: 80.1 bits (196), Expect = 5.280e-14
Identity = 34/84 (40.48%), Postives = 53/84 (63.10%), Query Frame = 1
Query:  316 TSFTVLYPGASIRPHFGPTNYKYRIHLCIDIDGVGGIVTAYGTRCWRVGHIFILDDSYLHAGFYDGTRPRVILMVDIAKPGLTP 567
            T F+V++PG  + PH GPTN + R+HL + +     I  A  TR W+ G + + DDS+ H  +++GT  R++L+VD+  P LTP
Sbjct:  784 TKFSVMHPGTHVWPHCGPTNCRLRVHLGLQVPANTFIRVAEKTRSWKEGEVLVFDDSFEHEVWHNGTSLRLVLIVDVWHPELTP 867          
BLAST of mRNA_Ecto-sp8_S_contig10736.1113.1 vs. uniprot
Match: A0A4C1XJ61_EUMVA (Asp_Arg_Hydrox domain-containing protein n=1 Tax=Eumeta variegata TaxID=151549 RepID=A0A4C1XJ61_EUMVA)

HSP 1 Score: 78.6 bits (192), Expect = 1.400e-13
Identity = 34/82 (41.46%), Postives = 52/82 (63.41%), Query Frame = 1
Query:  322 FTVLYPGASIRPHFGPTNYKYRIHLCIDIDGVGGIVTAYGTRCWRVGHIFILDDSYLHAGFYDGTRPRVILMVDIAKPGLTP 567
            F+++ PG  +RPH GPTN + R+HL +       +     TR WR G + + DDS+ H  +++GTRPR++L+VD+  P LTP
Sbjct:  353 FSLIEPGTHVRPHVGPTNCRLRMHLGLSNTTGTYLRVDRETRQWREGKVLLFDDSFEHEVWHNGTRPRLVLIVDVWHPALTP 434          
BLAST of mRNA_Ecto-sp8_S_contig10736.1113.1 vs. uniprot
Match: UPI001C902FA7 (aspartyl/asparaginyl beta-hydroxylase-like isoform X5 n=3 Tax=Amphibalanus amphitrite TaxID=1232801 RepID=UPI001C902FA7)

HSP 1 Score: 78.6 bits (192), Expect = 1.780e-13
Identity = 55/191 (28.80%), Postives = 84/191 (43.98%), Query Frame = 1
Query:   37 PFPSIETCRLQALCRTLKENIAVFTREFNA------HKDTFMENPEKLGYGGRYGRIIVNREEQRFGNHFIDTRKILEASADYMRTQMFNSYANTYVMATSFTVLYPGASIRPHFGPTNYKYRIHLCIDIDGVGGIVTAYGTRCWRVGHIFILDDSYLHAGFYDGTRPRVILMVDIAKPGLTPEHMEHITS 591
            P+ + E    QAL   L+        E  A       +D F    E+L   G + +  + R  ++     + T +  E          F   A        F++L PG+++ PH GPTN + R+HL I +    GI  A   R W  G + I+DDS+ H  + +GT  R +L+VDI  P LT +    +TS
Sbjct:  650 PYWTPEQTGSQALISELEAQFPTIRGEMLALLDSERPEDGFQPEQEQLSKEGDWKQYTMYRRGRKNQYACVKTPRTCEI------IDKFPEAAGCRRGQVKFSMLAPGSTVWPHTGPTNCRLRLHLGIKVPPGTGIRVAGEKRTWEEGKVLIIDDSFEHDVWNEGTESRFVLIVDIWHPELTEDERRTLTS 834          
BLAST of mRNA_Ecto-sp8_S_contig10736.1113.1 vs. uniprot
Match: UPI001C928285 (cell surface glycoprotein 1-like isoform X1 n=11 Tax=Amphibalanus amphitrite TaxID=1232801 RepID=UPI001C928285)

HSP 1 Score: 78.6 bits (192), Expect = 1.890e-13
Identity = 55/191 (28.80%), Postives = 83/191 (43.46%), Query Frame = 1
Query:   37 PFPSIETCRLQALCRTLKENIAVFTREFNA------HKDTFMENPEKLGYGGRYGRIIVNREEQRFGNHFIDTRKILEASADYMRTQMFNSYANTYVMATSFTVLYPGASIRPHFGPTNYKYRIHLCIDIDGVGGIVTAYGTRCWRVGHIFILDDSYLHAGFYDGTRPRVILMVDIAKPGLTPEHMEHITS 591
            P+ + E    QAL   L+        E  A       +D F    E+L   G + +  + R  ++     + T +  E          F   A        F++L PG ++ PH GPTN + R+HL I +    GI  A   R W  G + I+DDS+ H  + +GT  R +L+VDI  P LT +    +TS
Sbjct: 1093 PYWTPEQAGSQALISELEAQFPTIRGEMLALLDSERPEDGFQPEQEQLSKEGDWKQYTMYRRGRKNQYACVKTPRTCEI------IDKFPEAAGCRRGQVKFSMLAPGTTVWPHTGPTNCRLRLHLGIKVPPGTGIRVAGEKRTWEEGKVLIIDDSFEHDVWNEGTESRFVLIVDIWHPELTEDERRTLTS 1277          
BLAST of mRNA_Ecto-sp8_S_contig10736.1113.1 vs. uniprot
Match: A0A8K0JXW4_LADFU (Uncharacterized protein n=1 Tax=Ladona fulva TaxID=123851 RepID=A0A8K0JXW4_LADFU)

HSP 1 Score: 76.3 bits (186), Expect = 7.420e-13
Identity = 34/89 (38.20%), Postives = 55/89 (61.80%), Query Frame = 1
Query:  322 FTVLYPGASIRPHFGPTNYKYRIHLCIDI-DGVGGIVTAYGTRCWRVGHIFILDDSYLHAGFYDGTRPRVILMVDIAKPGLTPEHMEHI 585
            F+V+ PG  + PH GPTN + R HL + +  GV   V  +  R W+ G  F+ DDS+ H  +++GT PR++L++D+  P LTP+  + +
Sbjct:  291 FSVMMPGTHVWPHCGPTNCRLRSHLGLVVPSGVTIRVANHAPRTWKPGKFFVFDDSFEHEVWHNGTSPRLVLIMDVWHPELTPKERKSL 379          
BLAST of mRNA_Ecto-sp8_S_contig10736.1113.1 vs. uniprot
Match: UPI0018E52C77 (aspartyl/asparaginyl beta-hydroxylase-like n=1 Tax=Zerene cesonia TaxID=33412 RepID=UPI0018E52C77)

HSP 1 Score: 76.6 bits (187), Expect = 7.860e-13
Identity = 35/82 (42.68%), Postives = 51/82 (62.20%), Query Frame = 1
Query:  322 FTVLYPGASIRPHFGPTNYKYRIHLCIDIDGVGGIVTAYGTRCWRVGHIFILDDSYLHAGFYDGTRPRVILMVDIAKPGLTP 567
            F+++ PG  +RPH GPTN + R+HL +       I     TR W VG +FI DDS+ H  +++GT  R++L+VD+  P LTP
Sbjct:  590 FSLIEPGTHVRPHVGPTNCRLRMHLGLSNTKDTFIRVDKETRQWEVGKVFIFDDSFEHEVWHNGTGSRLVLIVDVWHPDLTP 671          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig10736.1113.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LP70_ECTSI2.590e-14898.48Similar to aspartate beta-hydroxylase isoform a n=... [more]
UPI000C2542842.040e-1440.66aspartyl/asparaginyl beta-hydroxylase n=1 Tax=Lept... [more]
D7GY40_TRICA2.860e-1441.67Aspartyl/asparaginyl beta-hydroxylase-like Protein... [more]
UPI001E28062E2.960e-1429.28aspartyl/asparaginyl beta-hydroxylase isoform X1 n... [more]
UPI001CF728895.280e-1440.48aspartyl/asparaginyl beta-hydroxylase isoform X1 n... [more]
A0A4C1XJ61_EUMVA1.400e-1341.46Asp_Arg_Hydrox domain-containing protein n=1 Tax=E... [more]
UPI001C902FA71.780e-1328.80aspartyl/asparaginyl beta-hydroxylase-like isoform... [more]
UPI001C9282851.890e-1328.80cell surface glycoprotein 1-like isoform X1 n=11 T... [more]
A0A8K0JXW4_LADFU7.420e-1338.20Uncharacterized protein n=1 Tax=Ladona fulva TaxID... [more]
UPI0018E52C777.860e-1342.68aspartyl/asparaginyl beta-hydroxylase-like n=1 Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig10736contigEcto-sp8_S_contig10736:5715..6311 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score421.0
Seed ortholog evalue3.1e-115
Seed eggNOG ortholog2880.D8LP70
Preferred nameASPHD2
Model size597
KEGG koko:K00476
Hectar predicted targeting categoryother localisation
Exons1
EggNOG free text desc.peptide-aspartate beta-dioxygenase activity
EggNOG OGsCOG3555@1,KOG3696@2759
EC1.14.11.16
Cds size597
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681143168.5718331-CDS-Ecto-sp8_S_contig10736:5714..63111681143168.5718331-CDS-Ecto-sp8_S_contig10736:5714..6311Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig10736 5715..6311 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig10736.1113.1prot_Ecto-sp8_S_contig10736.1113.1Ectocarpus species8 EcLAC_412polypeptideEcto-sp8_S_contig10736 5715..6311 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp8_S_contig10736.1113.1

>prot_Ecto-sp8_S_contig10736.1113.1 ID=prot_Ecto-sp8_S_contig10736.1113.1|Name=mRNA_Ecto-sp8_S_contig10736.1113.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=199bp
MPPVYGDVEMNGPFPSIETCRLQALCRTLKENIAVFTREFNAHKDTFMEN
PEKLGYGGRYGRIIVNREEQRFGNHFIDTRKILEASADYMRTQMFNSYAN
TYVMATSFTVLYPGASIRPHFGPTNYKYRIHLCIDIDGVGGIVTAYGTRC
WRVGHIFILDDSYLHAGFYDGTRPRVILMVDIAKPGLTPEHMEHITSD*
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mRNA from alignment at Ecto-sp8_S_contig10736:5715..6311-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp8_S_contig10736.1113.1 ID=mRNA_Ecto-sp8_S_contig10736.1113.1|Name=mRNA_Ecto-sp8_S_contig10736.1113.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=597bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10736:5715..6311- (Ectocarpus species8 EcLAC_412)
ATGCCACCTGTATATGGTGACGTTGAGATGAACGGGCCTTTTCCTTCGAT CGAAACGTGCCGATTGCAAGCGCTGTGCCGCACGTTGAAAGAAAACATTG CGGTGTTCACTCGCGAATTCAACGCTCACAAAGATACGTTCATGGAGAAC CCGGAAAAGCTTGGGTACGGTGGCCGGTATGGCAGAATCATTGTCAATCG CGAGGAGCAACGATTCGGCAACCATTTCATCGACACCCGCAAGATACTGG AGGCGTCGGCCGACTACATGCGAACACAGATGTTCAACAGCTATGCAAAC ACCTATGTGATGGCCACGTCATTCACCGTTCTCTACCCCGGCGCGTCCAT ACGCCCACATTTCGGCCCCACCAACTACAAGTACAGAATCCATCTCTGTA TAGATATCGATGGAGTTGGTGGAATTGTTACCGCGTACGGAACGAGGTGT TGGAGAGTGGGTCATATTTTTATCCTGGACGACTCTTATCTTCACGCGGG GTTTTACGACGGCACACGGCCTCGAGTCATTCTGATGGTTGACATCGCCA AACCAGGCTTGACGCCCGAGCACATGGAACACATTACGAGTGACTGA
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Coding sequence (CDS) from alignment at Ecto-sp8_S_contig10736:5715..6311-

>mRNA_Ecto-sp8_S_contig10736.1113.1 ID=mRNA_Ecto-sp8_S_contig10736.1113.1|Name=mRNA_Ecto-sp8_S_contig10736.1113.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=597bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10736:5715..6311- (Ectocarpus species8 EcLAC_412)
ATGCCACCTGTATATGGTGACGTTGAGATGAACGGGCCTTTTCCTTCGAT
CGAAACGTGCCGATTGCAAGCGCTGTGCCGCACGTTGAAAGAAAACATTG
CGGTGTTCACTCGCGAATTCAACGCTCACAAAGATACGTTCATGGAGAAC
CCGGAAAAGCTTGGGTACGGTGGCCGGTATGGCAGAATCATTGTCAATCG
CGAGGAGCAACGATTCGGCAACCATTTCATCGACACCCGCAAGATACTGG
AGGCGTCGGCCGACTACATGCGAACACAGATGTTCAACAGCTATGCAAAC
ACCTATGTGATGGCCACGTCATTCACCGTTCTCTACCCCGGCGCGTCCAT
ACGCCCACATTTCGGCCCCACCAACTACAAGTACAGAATCCATCTCTGTA
TAGATATCGATGGAGTTGGTGGAATTGTTACCGCGTACGGAACGAGGTGT
TGGAGAGTGGGTCATATTTTTATCCTGGACGACTCTTATCTTCACGCGGG
GTTTTACGACGGCACACGGCCTCGAGTCATTCTGATGGTTGACATCGCCA
AACCAGGCTTGACGCCCGAGCACATGGAACACATTACGAGTGACTGA
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