mRNA_Ecto-sp8_S_contig10683.1055.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig10683.1055.1 vs. uniprot
Match: D7G1F0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1F0_ECTSI) HSP 1 Score: 616 bits (1589), Expect = 2.040e-216 Identity = 311/315 (98.73%), Postives = 314/315 (99.68%), Query Frame = 1
Query: 7 AREALAKETMSSGSLFDSSRTAVPVSNAGGATHYTEIDTQADRDTRAILEKNIRLNEEGATTDKDGLYHGMAGYKNHIKKDEAQIGGNKHTGTQGPIRAPTFLRATCRFDYQPDICKDYKETGFCGFGDSCKFLHDRADYKSGWAMEQEFEAKEKKKKEREALGEWAEEENEEEYLVESDDDLPFACLICRQGFIDPIVTNCGHYFCERCAQEHYKTNPRCAACGKQTQGVFNAAKKLTEKLRKKGMVTRKEQAGAAGXXXXXXADEGGGDSDYEIREDGVQLTETDVVRRKTGTWATVTTEEDAVEGDGKKEGE 951
AREALAKETMS+GSLFDSSRTAVPVSNAGGATHYTEIDTQADRDTRAILEKNIRLNEEGATTDKDGLYHGMAGYKNHIKKDEAQIGGNKHTGTQGPIRAPTFLRATCRFDYQPDICKDYKETGFCGFGDSCKFLHDRADYKSGWAMEQEFEAKEKK+KEREALGEWAEEENEEEYLVESDDDLPFACLICRQGF+DPIVTNCGHYFCERCAQEHYKTNPRCAACGKQTQGVFNAAKKLTEKLRKKGMVTRKEQAGAAGXXXXXX DEGGGDSDYEIREDGVQLTETDVVRRKTGTWATVTTEEDAVEGDGKKEGE
Sbjct: 108 AREALAKETMSAGSLFDSSRTAVPVSNAGGATHYTEIDTQADRDTRAILEKNIRLNEEGATTDKDGLYHGMAGYKNHIKKDEAQIGGNKHTGTQGPIRAPTFLRATCRFDYQPDICKDYKETGFCGFGDSCKFLHDRADYKSGWAMEQEFEAKEKKRKEREALGEWAEEENEEEYLVESDDDLPFACLICRQGFVDPIVTNCGHYFCERCAQEHYKTNPRCAACGKQTQGVFNAAKKLTEKLRKKGMVTRKEQAGAAGXXXXXXXDEGGGDSDYEIREDGVQLTETDVVRRKTGTWATVTTEEDAVEGDGKKEGE 422
BLAST of mRNA_Ecto-sp8_S_contig10683.1055.1 vs. uniprot
Match: A0A6V1N7Z0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1N7Z0_HETAK) HSP 1 Score: 331 bits (849), Expect = 5.540e-106 Identity = 153/241 (63.49%), Postives = 189/241 (78.42%), Query Frame = 1
Query: 25 KETMSSGSLFDSSRTAVPVSNAGGATHYTEIDTQADRDTRAILEKNIRLNEEGATTDKDGLYHGMAGYKNHIKKDEAQIGGNKHTGTQGPIRAPTFLRATCRFDYQPDICKDYKETGFCGFGDSCKFLHDRADYKSGWAMEQEFEAKEKKKKEREALGEWAEEENEEE----YLVESDDDLPFACLICRQGFIDPIVTNCGHYFCERCAQEHYKTNPRCAACGKQTQGVFNAAKKLTEKLR 735
KE M +++S+R VP AG AT+ TEIDT DRD RAI E+N++LN EGAT D+ +Y G AGYKN+I+K E+QIGGNK+TGTQGPIRAP+ +RA CRFDYQPDICKDYKETGFCG+GDSCKF+HDR DYKSGW +EQE+E ++K KE+E LGEWA + E + YL++SDD+LPFAC ICR+ F P+ T CGHYFCE CA EHYKT+ RCA CGKQT G+FN AKK+ E+++
Sbjct: 39 KEGMQQAGVYESTREVVPTKYAGDATYTTEIDTATDRDARAIAERNLKLNAEGATNDETKIYRGQAGYKNYIEKKESQIGGNKYTGTQGPIRAPSNIRAICRFDYQPDICKDYKETGFCGYGDSCKFIHDRGDYKSGWQLEQEWEEQQKXXKEKEMLGEWASDAEEGDGDNPYLIDSDDELPFACHICREDFEQPVATLCGHYFCEECALEHYKTDKRCAICGKQTSGIFNQAKKIVERMK 279
BLAST of mRNA_Ecto-sp8_S_contig10683.1055.1 vs. uniprot
Match: A0A836CP80_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CP80_9STRA) HSP 1 Score: 296 bits (758), Expect = 9.260e-92 Identity = 162/301 (53.82%), Postives = 205/301 (68.11%), Query Frame = 1
Query: 52 FDSSRTAVPVSNAGGATHYTEIDTQADRDTRAILEKNIRLN-EEGATTDKDG----LYHGMAGYKNHIKKDEAQIGGNKHTGTQGPIRAPTFLRATCRFDYQPDICKDYKETGFCGFGDSCKFLHDRADYKSGWAMEQEFEAKEKKKKEREA-LGEWAEE----------ENEEEYLVESDDDLPFACLICRQGFIDPIVTNCGHYFCERCAQEHYKTNPRCAACGKQTQGVFNAAKKLTEKLRKKGMVTRKEQAGAAGXXXXXXADEGGGDSDYEIREDGVQLTETDVVRRKTGTWATVT 906
F S+R A+PV GGAT Y E +T DRD RAILE++I L EEG +G +Y G AGYK HI K ++Q+ GNKHTGTQGPIRAP + R T FDYQPDICKDYKETG+CGFGDSCKF+HDR DYK+GW E+E+E K+KK++ +A L W E +++Y V+ D DLPFAC ICR+ F DP+VTNCGH+FCE CA ++YK + RCAACGKQT GVFN A++L E + KKG+V +AG XXXXXX ++ +RE+ V+LT VV ++ G W TV+
Sbjct: 85 FKSTRDAMPVKTRGGATDYNESETAMDRDARAILERSIALQAEEGGEAGAEGGGPKVYKGQAGYKQHIAKSQSQVAGNKHTGTQGPIRAPQYARTTSVFDYQPDICKDYKETGYCGFGDSCKFMHDRGDYKAGWQQEREWEEKQKKRRAAQAALEAWGGEGERPVEDDDGSGDDKYAVDEDGDLPFACFICREAFRDPVVTNCGHHFCEACAMDNYKRSTRCAACGKQTGGVFNFARRLVEHMAKKGLV----KAGXXXXXXXXX--------EFAVREE-VELTAKSVVTKQQGGWQTVS 372
BLAST of mRNA_Ecto-sp8_S_contig10683.1055.1 vs. uniprot
Match: F0WQ73_9STRA (Uncharacterized protein AlNc14C195G8554 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WQ73_9STRA) HSP 1 Score: 276 bits (707), Expect = 3.120e-85 Identity = 134/232 (57.76%), Postives = 167/232 (71.98%), Query Frame = 1
Query: 49 LFDSSRTAVPVSNAGGATHYTEIDTQADRDTRAILEKNIRLNEEGATTDKDG-LYHGMAGYKNHIKKDEAQIGGNKHTGTQGPIRAPTFLRATCRFDYQPDICKDYKETGFCGFGDSCKFLHDRADYKSGWAMEQEFEAKEKKKKEREALGEWAEEENEEEYLVESDDDLPFACLICRQGFIDPIVTNCGHYFCERCAQEHYKTNPRCAACGKQTQGVFNAAKKLTEKLRKK 741
+ DS R VP AG AT+ T+IDT+ DRD RA+LEKNI LN+ G+ D G LY G A YKN+I K E+QIG NK+TGTQGPIRA T+ R+ CRFDYQPD+CKDYKETGFCGFGD+CKFLHDR DYK GW +E+E++ K+ +++R G+ +E +E EYLV D D FAC ICRQ F D + T CGH FCE+CA +H++ RC CGKQT G FN A ++ +K KK
Sbjct: 58 MIDSERQVVPHVYAGDATYETQIDTEKDRDARAVLEKNILLNKSGSIDDTSGKLYKGQAAYKNYIAKSESQIGMNKYTGTQGPIRAQTWARSICRFDYQPDVCKDYKETGFCGFGDTCKFLHDRGDYKGGWQIEKEYKEKQMAQRQRTLQGKTLDEVDENEYLVSDDADEQFACTICRQPFQDAVKTICGHIFCEKCALKHFRKTSRCFNCGKQTNGAFNVAWEIRKKEDKK 289
BLAST of mRNA_Ecto-sp8_S_contig10683.1055.1 vs. uniprot
Match: A0A024GUG8_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GUG8_9STRA) HSP 1 Score: 274 bits (700), Expect = 3.430e-84 Identity = 132/240 (55.00%), Postives = 170/240 (70.83%), Query Frame = 1
Query: 25 KETMSSGSLFDSSRTAVPVSNAGGATHYTEIDTQADRDTRAILEKNIRLNEEGATTDKDG-LYHGMAGYKNHIKKDEAQIGGNKHTGTQGPIRAPTFLRATCRFDYQPDICKDYKETGFCGFGDSCKFLHDRADYKSGWAMEQEFEAKEKKKKEREALGEWAEEENEEEYLVESDDDLPFACLICRQGFIDPIVTNCGHYFCERCAQEHYKTNPRCAACGKQTQGVFNAAKKLTEKLRKK 741
K+T+ ++ +S R VP AG AT+ T+IDT+ DRD RA++EKNI LN+ G+ D G LY G A YKN+I K E+QIG NK+TGTQGPIRA T+ R+ CRFDYQPD+CKDYKETGFCGFGD+CKFLHDR DYK GW +E+E+ K+ +++R G+ +E +E EYL+ DDD FAC ICRQ F + + T CGH FCE+CA + ++ RC CGKQT G FN A + +K KK
Sbjct: 50 KDTLGREAMIESERQVVPHVYAGDATYETQIDTEKDRDARAVMEKNISLNKAGSIDDTSGKLYKGQAAYKNYIAKSESQIGMNKYTGTQGPIRAQTWARSICRFDYQPDVCKDYKETGFCGFGDTCKFLHDRGDYKGGWQIEKEYNEKQMTQRQRIIQGKKIDEVDENEYLISDDDDEQFACTICRQPFQNAVKTICGHIFCEKCALKQFRKTSRCFNCGKQTNGAFNVASEHRQKEEKK 289
BLAST of mRNA_Ecto-sp8_S_contig10683.1055.1 vs. uniprot
Match: A0A8J2X4S8_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X4S8_9STRA) HSP 1 Score: 274 bits (701), Expect = 1.200e-83 Identity = 143/300 (47.67%), Postives = 193/300 (64.33%), Query Frame = 1
Query: 25 KETMSSGSLFDSSRTAVPVSNAGGATHYTEIDTQADRDTRAILEKNIRLNEEGATTDKDGLYHGMAGYKNHIKKDEAQIGGNKHTGTQGPIRAPTFLRATCRFDYQPDICKDYKETGFCGFGDSCKFLHDRADYKSGWAMEQEFEAKEKKKKEREALGEWAEEENEEEY------LVESDDDLPFACLICRQGFIDPIVTNCGHYFCERCAQEHYKT-NPRCAACGKQTQGVFNAAKKLTEKLRKKGMVTRKEQAGAAGXXXXXXADEGGGDSDYEIREDGVQLTETDVVRRKTGTWATV 903
++ + + ++F SSRT P+ + GGA Y E+DT+AD+DTRA LE+N+ L + T+ DG Y G AGYK+++KKDEAQIG NK+TGT+GPIRAP F+R TCRFDYQPD+CKDYK+TGFCG+GDSCKF+HDR DYK+GW +E EF+ + + LG+ E++EEE + + D+LPFAC ICR F DP+VT CGHYFC CA +H+++ N RC C KQT G+ +AA KL K + G + + G +GG + + G Q E R TG W +V
Sbjct: 50 EDALQASAVFASSRTTAPIDHRGGAFAYGEVDTEADKDTRAQLERNLELQK----TEGDGTYRGQAGYKSYVKKDEAQIGANKYTGTKGPIRAPQFVRNTCRFDYQPDVCKDYKDTGFCGYGDSCKFMHDRGDYKTGWQLEAEFQRQXXXXXXXKMLGKLDGEDSEEERERDKFRIKDGGDELPFACHICRGPFRDPMVTQCGHYFCANCASDHFRSRNTRCPICEKQTYGMLSAAPKLRAKAKAVGGFEKFFELGLKVPDGDDDDGKGGEAYGARVAQPGAQRPEK---REATGYWQSV 342
BLAST of mRNA_Ecto-sp8_S_contig10683.1055.1 vs. uniprot
Match: F0Y2F8_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y2F8_AURAN) HSP 1 Score: 269 bits (688), Expect = 3.800e-83 Identity = 126/241 (52.28%), Postives = 170/241 (70.54%), Query Frame = 1
Query: 28 ETMSSGSLFDSSRTAVPVSNAGGATHYTEIDTQADRDTRAILEKNIRLNEEGATTDKDGLYHGMAGYKNHIKKDEAQIGGNKHTGTQGPIRAPTFLRATCRFDYQPDICKDYKETGFCGFGDSCKFLHDRADYKSGWAMEQEFEAKEKKKKEREALGEWAEEENEEEYLVES------DDDLPFACLICRQGFIDPIVTNCGHYFCERCAQEHYKT-NPRCAACGKQTQGVFNAAKKLTEK 729
+ M ++F SSR PV + GGA + + DT D+D RA+L + L E GAT D+ GLY G AGYK+++K +EAQIG NK+TGT+GPIRAP+F+R TCRFDYQPD+CKDYK+TGFCG+GDSCKF+HDR DYK+GW +E E++ ++++ KERE LG+ E ++++E ++LPFAC +CR F DP++T CGHY+C CA H++ N RC C KQT G+ NAA KL K
Sbjct: 5 DRMQGAAVFASSRDVAPVEHRGGAFAHQDFDTDKDQDARALLRRKFELQEAGATNDETGLYQGQAGYKSYVKLNEAQIGANKYTGTKGPIRAPSFVRNTCRFDYQPDVCKDYKDTGFCGYGDSCKFMHDRGDYKTGWQLEAEYQRQKERDKEREMLGKLGEPDSDDEREANKFRVGAGAEELPFACHLCRGPFKDPMMTTCGHYYCASCASSHFREKNTRCPICEKQTYGMLNAAPKLRAK 245
BLAST of mRNA_Ecto-sp8_S_contig10683.1055.1 vs. uniprot
Match: A0A7S2SX26_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SX26_9STRA) HSP 1 Score: 270 bits (689), Expect = 5.900e-80 Identity = 143/296 (48.31%), Postives = 189/296 (63.85%), Query Frame = 1
Query: 91 GGATHYTEIDTQADRDTRAILEKNIRLNEEGATTDKDGLYHGMAGYKNHIKKDEAQIGGNKHTGTQGPIRAPTFLRATCRFDYQPDICKDYKETGFCGFGDSCKFLHDRADYKSGWAMEQEFEAKEKKKKEREALG---EWAEEENEEEYLVES-DDDLPFACLICRQGFIDPIVTNCGHYFCERCAQEHYKTNPRCAACGKQTQGVFNAAKKLTEKLRKKGMV-------TRKEQAGAAGXXXXXXADEGGGDSDYEIREDGVQLTETDVVRRKTGTWATVTTEEDAVEGDGKKE 945
G AT +EIDT DRD RA+LEK+IRL + + D +Y G AGYK I+K E+QIGGNKHTGTQGPIRAP F RATCRFDYQPDICKDYK+TGFCGFGDSCKF+HDR +YK+GW +E+E+E K+ K+K+ A+G + E++ E++ V DDDLPFAC +CR F +P+VT CGH+FC +C + Y+++P C C K T G+FN ++KL K G + ++ AG A SD +R + +R G+WATV +ED +G+G E
Sbjct: 75 GSATAESEIDTARDRDARALLEKSIRLQGDSESVDGKKVYRGQAGYKQFIEKKESQIGGNKHTGTQGPIRAPAFFRATCRFDYQPDICKDYKDTGFCGFGDSCKFMHDRGNYKTGWQLEKEWEEKQAKRKQLLAMGLDPDGTEDDEEKQLRVNGEDDDLPFACFLCRGPFKEPVVTTCGHFFCHQCIAKSYESSPLCPVCTKNTAGIFNHSRKLEALANKHGGYDGLFRDSSGEKDAGTAAAPR----------SDQVVRPAPAR-------KRPQGSWATV--QEDEGDGEGVSE 351
BLAST of mRNA_Ecto-sp8_S_contig10683.1055.1 vs. uniprot
Match: A0A485KGZ0_9STRA (Aste57867_4890 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KGZ0_9STRA) HSP 1 Score: 260 bits (664), Expect = 1.240e-78 Identity = 127/228 (55.70%), Postives = 171/228 (75.00%), Query Frame = 1
Query: 58 SSRTAVPVSNAGGATHYTEIDTQADRDTRAILEKNIRLNEEGATTDKDG-LYHGMAGYKNHIKKDEAQIGGNKHTGTQGPIRAPTFLRATCRFDYQPDICKDYKETGFCGFGDSCKFLHDRADYKSGWAMEQEFEAKEKKKKE--REALGEWAEEENEEE-YLVESDDDLPFACLICRQGFIDPIVTNCGHYFCERCAQEHYKTNPRCAACGKQTQGVFNAAKKLTEK 729
S+R +V S AG AT+ +IDT+ D+D RAILEKN+++N EG D G +Y G AGYKN++ K E+QIG NK+TGTQGPIRA T+ R+ CRFDY PDICKDYKETGFCG+GD+CKFLHDR DYKSGW +++E++ KE+KK++ +E G + ++++E Y+++SDD+ FAC ICR F + + T CGH+FCE+CA + YK + C C KQT GVFN AK+L E+
Sbjct: 64 STRQSVRQSYAGDATYELQIDTEKDKDARAILEKNVKMNAEG--NDLSGKIYQGQAGYKNYVTKKESQIGMNKYTGTQGPIRAQTWARSICRFDYAPDICKDYKETGFCGYGDNCKFLHDRGDYKSGWQIDKEWDEKERKKQQALKEGRGTGDDSDSDDEKYVIKSDDEEQFACTICRNPFTNAVETICGHFFCEKCALKRYKKSSLCFNCQKQTNGVFNVAKRLRER 289
BLAST of mRNA_Ecto-sp8_S_contig10683.1055.1 vs. uniprot
Match: A0A6G0WHA5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WHA5_9STRA) HSP 1 Score: 260 bits (664), Expect = 1.540e-78 Identity = 131/232 (56.47%), Postives = 171/232 (73.71%), Query Frame = 1
Query: 49 LFDSSRTAVPVSNAGGATHYTEIDTQADRDTRAILEKNIRLNEEGATTDKDG-LYHGMAGYKNHIKKDEAQIGGNKHTGTQGPIRAPTFLRATCRFDYQPDICKDYKETGFCGFGDSCKFLHDRADYKSGWAMEQEFEAKEKKKKEREALGEWAE----EENEEEYLVESDDDLPFACLICRQGFIDPIVTNCGHYFCERCAQEHYKTNPRCAACGKQTQGVFNAAKKLTEK 729
L S+R AV + AG AT+ +IDT+ DRD RA+LEK+I+LN EG D G +Y G AGYK+++ K E+Q+G NK+TGTQGPIRA T+ R+ CRFDY PDICKDYKETGFCG+GD+CKFLHDR DYKSGW +++E+ KEK+K++ AL E + + ++E+Y++ SD+D FAC ICRQ F + + T CGH+FCE+CA + YK + C C KQT GVFN AKKL EK
Sbjct: 62 LQTSTRQAVRQTYAGDATYELQIDTEKDRDARALLEKSIKLNAEG--NDLSGKIYQGQAGYKSYVTKKESQVGMNKYTGTQGPIRAQTWARSICRFDYAPDICKDYKETGFCGYGDNCKFLHDRGDYKSGWQIDKEWNEKEKRKQQ--ALLEGRDGGDSDSDDEKYVIPSDEDEQFACTICRQPFTNAVETICGHFFCEKCALKRYKKSSLCFNCRKQTNGVFNVAKKLREK 289 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig10683.1055.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig10683.1055.1 >prot_Ecto-sp8_S_contig10683.1055.1 ID=prot_Ecto-sp8_S_contig10683.1055.1|Name=mRNA_Ecto-sp8_S_contig10683.1055.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=308bp MSSGSLFDSSRTAVPVSNAGGATHYTEIDTQADRDTRAILEKNIRLNEEGback to top mRNA from alignment at Ecto-sp8_S_contig10683:2657..6742- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig10683.1055.1 ID=mRNA_Ecto-sp8_S_contig10683.1055.1|Name=mRNA_Ecto-sp8_S_contig10683.1055.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=4086bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10683:2657..6742- (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig10683:2657..6742- >mRNA_Ecto-sp8_S_contig10683.1055.1 ID=mRNA_Ecto-sp8_S_contig10683.1055.1|Name=mRNA_Ecto-sp8_S_contig10683.1055.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=924bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10683:2657..6742- (Ectocarpus species8 EcLAC_412)back to top |