mRNA_Ecto-sp8_S_contig10674.1045.1 (mRNA) Ectocarpus species8 EcLAC_412

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp8_S_contig10674.1045.1
Unique NamemRNA_Ecto-sp8_S_contig10674.1045.1
TypemRNA
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Homology
BLAST of mRNA_Ecto-sp8_S_contig10674.1045.1 vs. uniprot
Match: D7FMI7_ECTSI (Glycolate Oxidase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMI7_ECTSI)

HSP 1 Score: 503 bits (1294), Expect = 3.830e-177
Identity = 259/270 (95.93%), Postives = 261/270 (96.67%), Query Frame = 1
Query:    1 MGRLEDQSATASAASAGMPLPTPKSDTARPGCTRVNVADYERRAKVVLSKGEFDYFAGGANDMATLRENRAAYRRLRLRPRVLRDVSSVDTTRTVLGERMAHPIGISPTAEHRAAHDDGELATARAAAGTCSMMAVSSSATTALEDVATAGGPNMRRWFQLSLSSRKNRTVLAGLVRRANAAGYTALVVTVDRPVLGRREADLRNCYELAPRLAEGRVVSATGARIGRRPDGTMDLGQASDARPEAGKSLNWDDVHWLRTICGDMKVFTK 810
            MGRLE QSATASAAS GMPLPTPKSDTARPGCT VNVADYERRAKVVL KGEFDYFAGGANDM TLRENRAAYRRLRLRPRVLRDVSSVDTTRTVLGERMAHPIGISPTAEHRAAHDDGELATARAAAGTCSMM VSSSATTALEDVATAGGPNM+RWFQLSLSSRKNRTVLAGLVRRA AAGYTALVVTVDRPVLGRREADLRNCYELAPRLAEGRVVSATGARIGRRPDGTMDLGQASDARPEAGKSLNWDDVHWLRTICGDMK+  K
Sbjct:    1 MGRLEGQSATASAASTGMPLPTPKSDTARPGCTHVNVADYERRAKVVLPKGEFDYFAGGANDMVTLRENRAAYRRLRLRPRVLRDVSSVDTTRTVLGERMAHPIGISPTAEHRAAHDDGELATARAAAGTCSMMVVSSSATTALEDVATAGGPNMQRWFQLSLSSRKNRTVLAGLVRRAIAAGYTALVVTVDRPVLGRREADLRNCYELAPRLAEGRVVSATGARIGRRPDGTMDLGQASDARPEAGKSLNWDDVHWLRTICGDMKIVVK 270          
BLAST of mRNA_Ecto-sp8_S_contig10674.1045.1 vs. uniprot
Match: D8LDI6_ECTSI (Glycolate Oxidase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDI6_ECTSI)

HSP 1 Score: 251 bits (640), Expect = 3.780e-78
Identity = 136/240 (56.67%), Postives = 170/240 (70.83%), Query Frame = 1
Query:   91 GCTRVNVADYERRAKVVLSKGEFDYFAGGANDMATLRENRAAYRRLRLRPRVLRDVSSVDTTRTVLGERMAHPIGISPTAEHRAAHDDGELATARAAAGTCSMMAVSSSATTALEDVATAGGPNMRRWFQLSLSSRKNRTVLAGLVRRANAAGYTALVVTVDRPVLGRREADLRNCYELAPRLAEGRVVSATGARIGRRPDGTMDLGQASDARPEAGKSLNWDDVHWLRTICGDMKVFTK 810
            G   VNV ++ER A+++LSK  FDY+A GANDM TLRENRAA+ RLRLRPR+LRDVS VDT+ +VLG++++ PI I+PTA  R AHD GE ATA AAA   ++M +SS +TT+LEDVA AGGP   RWFQL +   K+R +   LV+RA AAGYTAL VTVD PVLGRREAD+RN ++L   L  G  VSA GA      DG  D G A+       ++L+W+D+ WLRTICG MK+  K
Sbjct:   23 GWEPVNVREFERHAQLMLSKNAFDYYASGANDMVTLRENRAAFNRLRLRPRILRDVSMVDTSTSVLGQKISSPICIAPTAMQRMAHDSGECATAGAAAKAGALMTLSSWSTTSLEDVAKAGGPGGARWFQLYVY--KDRKITEQLVKRALAAGYTALAVTVDTPVLGRREADMRNRFKLPEHLTMGNFVSAGGAHASGTKDGGNDSGLAAYVASLIDRTLDWNDIKWLRTICGSMKIVVK 260          
BLAST of mRNA_Ecto-sp8_S_contig10674.1045.1 vs. uniprot
Match: A0A6V1QYU9_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1QYU9_HETAK)

HSP 1 Score: 216 bits (550), Expect = 1.170e-64
Identity = 125/246 (50.81%), Postives = 161/246 (65.45%), Query Frame = 1
Query:   82 ARPGCTRVNVADYERRAKVVLSKGEFDYFAGGANDMATLRENRAAYRRLRLRPRVLRDVSSVDTTRTVLGERMAHPIGISPTAEHRAAHDDGELATARAAAGTCSMMAVSSSATTALEDVATAGG---PNMRRWFQLSLSSRKNRTVLAGLVRRANAAGYTALVVTVDRPVLGRREADLRNCYELAPRLAEGRVVSATGARIGRRPDGTMDLGQASDARPEAGKSLNWDDVHWLRTICGDMKVFTK 810
            A+ G   VNV +YE  A   + K  FDY+A GANDM TLRENRAAY+RLR+RPR+LRDVS VD + T+LG++++ PI ++P+A  R AH+DGE ATARA A + ++M +SS +T ALE+VA AG    P+  RWFQL +   K+R V+  LVRRA AAGY A  VTVD PVLGRREAD+RN ++L   L  G   S  GA      DG  D G A+       ++LNW+D+ WL+     MKV  K
Sbjct:   18 AKSGWEPVNVREYEAHAAEYMPKNAFDYYASGANDMITLRENRAAYQRLRMRPRILRDVSKVDISTTILGDKISSPICVAPSAMQRMAHEDGENATARACAKSGTLMTLSSWSTIALEEVAQAGAAAEPSAPRWFQLYVY--KDRDVVLDLVRRAEAAGYKAFAVTVDTPVLGRREADVRNRFKLPTHLTMGNFASKGGAHASGTKDGGKDSGLAAYVAGLIDRTLNWEDIAWLKRNTF-MKVVVK 260          
BLAST of mRNA_Ecto-sp8_S_contig10674.1045.1 vs. uniprot
Match: A0A836CMB2_9STRA (Glycolate oxidase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMB2_9STRA)

HSP 1 Score: 209 bits (532), Expect = 6.400e-62
Identity = 120/233 (51.50%), Postives = 157/233 (67.38%), Query Frame = 1
Query:   91 GCTRVNVADYERRAKVVLSKGEFDYFAGGANDMATLRENRAAYRRLRLRPRVLRDVSSVDTTRTVLGERMAHPIGISPTAEHRAAHDDGELATARAAAGTCSMMAVSSSATTALEDVATA--GGPNMRRWFQLSLSSRKNRTVLAGLVRRANAAGYTALVVTVDRPVLGRREADLRNCYELAPRLAEGRVVSATGARIGRRPDGTMDLGQASDARPEAGKSLNWDDVHWLRTI 783
            G   V+V +YE+ A+++L K  FDY+A GANDM TLRENRAA+ RLR+RPR++RDVSS     TVLG  +  PI I+P+A  R AHDDGE AT+ AA  + ++M +SS +TT LE+VA A  GGP   RWFQL +   K+R + A LV+RA A+GYTAL VTVD PVLGRREAD+RN ++L   L  G  + A GA      DG  D G ++       ++L+WDD+ WLR+I
Sbjct:   26 GWEPVSVREYEKAAEMMLPKNAFDYYASGANDMITLRENRAAFSRLRIRPRIMRDVSSTSNKTTVLGIPVNSPICIAPSAMQRMAHDDGEKATSAAAGKSNTLMTLSSWSTTPLEEVAAAYPGGP---RWFQLYVY--KDRKLTAELVKRAEASGYTALAVTVDTPVLGRREADVRNRFKLPVHLTMGNFIGAGGAHAEGTKDGGKDSGLSAYVASLIDRTLSWDDIRWLRSI 253          
BLAST of mRNA_Ecto-sp8_S_contig10674.1045.1 vs. uniprot
Match: W7UBQ6_9STRA (Peroxisomal glycolate oxidase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7UBQ6_9STRA)

HSP 1 Score: 206 bits (525), Expect = 5.920e-61
Identity = 117/228 (51.32%), Postives = 149/228 (65.35%), Query Frame = 1
Query:  103 VNVADYERRAKVVLSKGEFDYFAGGANDMATLRENRAAYRRLRLRPRVLRDVSSVDTTRTVLGERMAHPIGISPTAEHRAAHDDGELATARAAAGTCSMMAVSSSATTALEDVATAGGPNMRRWFQLSLSSRKNRTVLAGLVRRANAAGYTALVVTVDRPVLGRREADLRNCYELAPRLAEGRVVSATGARIGRRPDGTMDLGQASDARPEAGKSLNWDDVHWLRTIC 786
            VN+ ++E  AK  L K  FDY+A GANDM TLRENRAA+ RLR+RPR+LRDVS VDT  TVLG+ +A PI ++PTA  R A  +GELATARA A   ++M +SS +TT++EDVA A    + +WFQL +   K+R + A L RRA  AGY AL +TVD PVLGRREAD+RN ++L   L       A G+      DG  D G A+       ++L W DV WLR+IC
Sbjct:   26 VNIREFEAYAKATLPKNAFDYYASGANDMITLRENRAAFERLRMRPRILRDVSHVDTRTTVLGDPVAFPICVAPTAMQRMASPEGELATARACARQQTLMTLSSWSTTSVEDVAAAAP--IPKWFQLYVY--KDRELTAELARRAERAGYKALAITVDTPVLGRREADVRNRFKLPAHLTMANFAGAGGSHAEGTKDGGKDSGLAAYVASLIDRTLQWKDVQWLRSIC 249          
BLAST of mRNA_Ecto-sp8_S_contig10674.1045.1 vs. uniprot
Match: A0A7R9UGG8_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UGG8_9STRA)

HSP 1 Score: 192 bits (487), Expect = 2.950e-55
Identity = 119/253 (47.04%), Postives = 153/253 (60.47%), Query Frame = 1
Query:   55 PLPTPKSDTARPGCTRVNVADYERRAKVVLSKGEFDYFAGGANDMATLRENRAAYRRLRLRPRVLRDVSSVDTTRTVLGERMAHPIGISPTAEHRAAHDDGELATARAAAGTCSMMAVSSSATTALEDVATAGGPNMRRWFQLSLSSRKNRTVLAGLVRRANAAGYTALVVTVDRPVLGRREADLRNCYELAPRLAEGRVVSATGARI-GRRPDGTMDLGQASDARPEAGKSLNWDDVHWLRTICGDMKVFTK 810
            P   P+      G T VN+ +YE  AK  + +  +DY+A GA DM TLRENRAA+ RLR RPR+LRDVSS+DT  TVLG++++ PI I+PTA  + AH DGE ATARAA    ++M +SS +T +LE+VA    P+  RWFQL +   K+R V   LVRRA   GY AL VTVD PVLGRREAD+RN + L   L  G      GA   G +  G    G AS       ++L W+D+ WLR     +K+  K
Sbjct:   11 PAQEPRYTPTGAGPTPVNLKEYEAFAKNNMPRNAWDYYASGALDMITLRENRAAWGRLRFRPRILRDVSSIDTATTVLGQKVSMPICIAPTAMQQMAHPDGERATARAARKKGALMTLSSWSTLSLEEVAEEA-PDSFRWFQLYVY--KDRDVTLDLVRRAERNGYKALAVTVDTPVLGRREADVRNRFSLPSHLTMGNFAGVGGAHSSGTKSSGAEGSGLASYCASLIDRTLTWEDLRWLRANTS-LKIVVK 259          
BLAST of mRNA_Ecto-sp8_S_contig10674.1045.1 vs. uniprot
Match: A0A7S2V919_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V919_9STRA)

HSP 1 Score: 189 bits (480), Expect = 7.690e-55
Identity = 107/211 (50.71%), Postives = 141/211 (66.82%), Query Frame = 1
Query:  187 MATLRENRAAYRRLRLRPRVLRDVSSVDTTRTVLGERMAHPIGISPTAEHRAAHDDGELATARAAAGTCSMMAVSSSATTALEDVATAGGPNMRRWFQLSLSSRKNRTVLAGLVRRANAAGYTALVVTVDRPVLGRREADLRNCYELAPRLAEGRVVSATGARIGRRPDGTMDLGQASDARPEAGKSLNWDDVHWLRTICGDMKVFTKCFQ 819
            M TLRENRA Y RLRLRPR++RDVS  D++ TVLG++++ PI ++P+A  R AHDDGE AT++A A T ++M +SS +TTALE+V+ A  P   RWFQL +   K+R V   LVRRA AAGY AL VTVD PVLGRREAD+RN ++L P L  G  V   G+      DG  D G A+       ++LNW+D+ WLR++   +K+  K  Q
Sbjct:    1 MITLRENRAGYTRLRLRPRIMRDVSQTDSSTTVLGDKVSSPICVAPSAMQRMAHDDGECATSKACAKTGTLMTLSSWSTTALEEVSDAA-PGGLRWFQLYVY--KDRVVTLDLVRRAEAAGYKALAVTVDTPVLGRREADVRNRFKLPPHLTMGNFVGKGGSHAEGTKDGGKDSGLAAYVASLIDRTLNWEDIQWLRSVTS-LKIVVKGVQ 207          
BLAST of mRNA_Ecto-sp8_S_contig10674.1045.1 vs. uniprot
Match: A0A2R6X967_MARPO ((S)-2-hydroxy-acid oxidase n=3 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6X967_MARPO)

HSP 1 Score: 189 bits (480), Expect = 2.230e-54
Identity = 113/243 (46.50%), Postives = 161/243 (66.26%), Query Frame = 1
Query:   82 ARPGCTRVNVADYERRAKVVLSKGEFDYFAGGANDMATLRENRAAYRRLRLRPRVLRDVSSVDTTRTVLGERMAHPIGISPTAEHRAAHDDGELATARAAAGTCSMMAVSSSATTALEDVATAGGPNMRRWFQLSLSSRKNRTVLAGLVRRANAAGYTALVVTVDRPVLGRREADLRNCYELAPRLAEGRVVSATGARIGRRPDGTMDLGQASDARPEAGKSLNWDDVHWLRTICGDMKVFTK 810
            A P  T  NV ++E  AK  L K  +DY+A GA D  TL+ENR A+ R+R RPR+L DV++VDT+ T+LG +++ PI ++PTA  R AH +GELATARA A   ++M +SS AT+++E+VA+ G P +R +FQL +   K+R V+A LVRRA  AG+TA+ +TVD P+LGRREAD++N + L P L    + +  G  +G+  + T D G AS    +  KSL+W DV WL++I   M +  K
Sbjct:    2 ANPAATITNVCEFEEVAKQKLPKMVYDYYASGAEDQWTLKENRHAFERIRFRPRILIDVTNVDTSTTILGHKVSMPIMVAPTAMQRMAHPEGELATARAVASHDTIMTLSSWATSSVEEVASTG-PGIR-FFQLYVY--KDRNVVAQLVRRAEKAGFTAIALTVDTPILGRREADIKNRFSLPPHLT---LKNFEGLDLGQM-EKTQDSGLASYVAGQIDKSLSWKDVKWLQSITS-MPILVK 235          
BLAST of mRNA_Ecto-sp8_S_contig10674.1045.1 vs. uniprot
Match: A0A7S2FX59_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FX59_9STRA)

HSP 1 Score: 187 bits (476), Expect = 5.290e-54
Identity = 110/223 (49.33%), Postives = 139/223 (62.33%), Query Frame = 1
Query:  142 LSKGEFDYFAGGANDMATLRENRAAYRRLRLRPRVLRDVSSVDTTRTVLGERMAHPIGISPTAEHRAAHDDGELATARAAAGTCSMMAVSSSATTALEDVATAGGPNMRRWFQLSLSSRKNRTVLAGLVRRANAAGYTALVVTVDRPVLGRREADLRNCYELAPRLAEGRVVSATGARIGRRPDGTMDLGQASDARPEAGKSLNWDDVHWLRTICGDMKVFTK 810
            L K  FDY+A GANDM TLRENRAA+ RLR+RPR+LR+V  V+   T+LG++++ PI +SPTA  + AH DGELATARAA    ++M +SS +T  LE+VA A  P   RWFQL +   K+R V   L++RA AAGY AL VTVD PVLGRREAD+RN + L   L  G   +  G             G A        K+LNWDD+ WLR +   MK+  K
Sbjct:    3 LDKNAFDYYASGANDMITLRENRAAFTRLRMRPRILRNVEHVNMETTILGDKVSMPILLSPTAMQQMAHADGELATARAAQKAGTLMTLSSWSTLPLEEVAAAA-PGGLRWFQLYVY--KDREVTLDLIKRAEAAGYKALAVTVDTPVLGRREADVRNKFSLPAHLTMGNFANTGGDHASGTKASDGGSGLAKYVASLIDKTLNWDDIQWLRKVT-TMKIVVK 221          
BLAST of mRNA_Ecto-sp8_S_contig10674.1045.1 vs. uniprot
Match: A0A024UNA0_9STRA (FMN hydroxy acid dehydrogenase domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UNA0_9STRA)

HSP 1 Score: 187 bits (474), Expect = 9.470e-54
Identity = 106/227 (46.70%), Postives = 144/227 (63.44%), Query Frame = 1
Query:  103 VNVADYERRAKVVLSKGEFDYFAGGANDMATLRENRAAYRRLRLRPRVLRDVSSVDTTRTVLGERMAHPIGISPTAEHRAAHDDGELATARAAAGTCSMMAVSSSATTALEDVATAGGPNMRRWFQLSLSSRKNRTVLAGLVRRANAAGYTALVVTVDRPVLGRREADLRNCYELAPRLAEGRVVSATGARIGRRPDGTMDLGQASDARPEAGKSLNWDDVHWLRTI 783
            ++V ++E  AK  L K   DY+A GA+DM TL+ENR A++RL+L PRVLRDV  +DT+ TVLG+ +  P+ I+P A  R AH DGELA+ RAAA   +   +S+ +TT+LEDVA A GPN  RWFQL +   K+R +   LV RA  AGY ALV+TVD P+LG R+ADLRN ++L   L+            GR   G  ++G ++ A      +L W DV WL++I
Sbjct:   11 LSVDEFEEHAKAFLPKPALDYYASGADDMLTLKENRLAFQRLKLMPRVLRDVRHIDTSTTVLGQPIKTPVCIAPAAMQRMAHPDGELASTRAAAAAGACYILSTVSTTSLEDVAAANGPNALRWFQLYIF--KDRELTRSLVERAERAGYKALVLTVDTPILGNRQADLRNGFKLPSHLSMANFAG------GRHATGINEVGLSAYATELFDTNLTWADVAWLKSI 229          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig10674.1045.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FMI7_ECTSI3.830e-17795.93Glycolate Oxidase n=2 Tax=Ectocarpus TaxID=2879 Re... [more]
D8LDI6_ECTSI3.780e-7856.67Glycolate Oxidase n=2 Tax=Ectocarpus TaxID=2879 Re... [more]
A0A6V1QYU9_HETAK1.170e-6450.81Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A836CMB2_9STRA6.400e-6251.50Glycolate oxidase n=1 Tax=Tribonema minus TaxID=30... [more]
W7UBQ6_9STRA5.920e-6151.32Peroxisomal glycolate oxidase n=2 Tax=Monodopsidac... [more]
A0A7R9UGG8_9STRA2.950e-5547.04Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S2V919_9STRA7.690e-5550.71Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A2R6X967_MARPO2.230e-5446.50(S)-2-hydroxy-acid oxidase n=3 Tax=Marchantia poly... [more]
A0A7S2FX59_9STRA5.290e-5449.33Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A024UNA0_9STRA9.470e-5446.70FMN hydroxy acid dehydrogenase domain-containing p... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig10674contigEcto-sp8_S_contig10674:206..3275 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score503.1
Seed ortholog evalue8.5e-140
Seed eggNOG ortholog2880.D7FMI7
Preferred nameGOX
Model size822
KEGG rclassRC00042
KEGG koko:K11517,ko:K13344
KEGG TC3.A.20.1
KEGG ReactionR00475
KEGG Pathwayko00630,ko01100,ko01110,ko01120,ko01130,ko01200,ko04146,map00630,map01100,map01110,map01120,map01130,map01200,map04146
KEGG ModuleM00532
Hectar predicted targeting categoryother localisation
GOsGO:0002218,GO:0002253,GO:0002376,GO:0002682,GO:0002684,GO:0003674,GO:0003824,GO:0003973,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005777,GO:0005829,GO:0005840,GO:0005911,GO:0006950,GO:0006952,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0008891,GO:0009058,GO:0009506,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009605,GO:0009607,GO:0009617,GO:0009719,GO:0009725,GO:0009735,GO:0009853,GO:0009987,GO:0010033,GO:0010109,GO:0010204,GO:0016020,GO:0016032,GO:0016491,GO:0016614,GO:0016899,GO:0016999,GO:0017000,GO:0017144,GO:0019048,GO:0019222,GO:0022626,GO:0023052,GO:0030054,GO:0031323,GO:0031347,GO:0031349,GO:0032991,GO:0035821,GO:0042221,GO:0042579,GO:0042742,GO:0042743,GO:0043094,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0044003,GO:0044237,GO:0044249,GO:0044403,GO:0044419,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045088,GO:0045089,GO:0048046,GO:0048518,GO:0048583,GO:0048584,GO:0050665,GO:0050776,GO:0050778,GO:0050789,GO:0050794,GO:0050896,GO:0051186,GO:0051188,GO:0051701,GO:0051704,GO:0051707,GO:0051716,GO:0051817,GO:0055044,GO:0055114,GO:0065007,GO:0072593,GO:0080134,GO:0098542,GO:1903409,GO:1990904
Exons6
EggNOG free text desc.very-long-chain-(S)-2-hydroxy-acid oxidase activity
EggNOG OGsCOG1304@1,KOG0538@2759
EC1.1.3.15
Cds size822
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig10674.1045.1prot_Ecto-sp8_S_contig10674.1045.1Ectocarpus species8 EcLAC_412polypeptideEcto-sp8_S_contig10674 206..3275 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681143163.628152-CDS-Ecto-sp8_S_contig10674:205..3191681143163.628152-CDS-Ecto-sp8_S_contig10674:205..319Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig10674 206..319 -
1681143163.6439857-CDS-Ecto-sp8_S_contig10674:647..8541681143163.6439857-CDS-Ecto-sp8_S_contig10674:647..854Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig10674 648..854 -
1681143163.65367-CDS-Ecto-sp8_S_contig10674:1202..13751681143163.65367-CDS-Ecto-sp8_S_contig10674:1202..1375Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig10674 1203..1375 -
1681143163.6634777-CDS-Ecto-sp8_S_contig10674:1871..19901681143163.6634777-CDS-Ecto-sp8_S_contig10674:1871..1990Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig10674 1872..1990 -
1681143163.6742866-CDS-Ecto-sp8_S_contig10674:2731..28641681143163.6742866-CDS-Ecto-sp8_S_contig10674:2731..2864Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig10674 2732..2864 -
1681143163.6909707-CDS-Ecto-sp8_S_contig10674:3199..32751681143163.6909707-CDS-Ecto-sp8_S_contig10674:3199..3275Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig10674 3200..3275 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp8_S_contig10674.1045.1

>prot_Ecto-sp8_S_contig10674.1045.1 ID=prot_Ecto-sp8_S_contig10674.1045.1|Name=mRNA_Ecto-sp8_S_contig10674.1045.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=274bp
MGRLEDQSATASAASAGMPLPTPKSDTARPGCTRVNVADYERRAKVVLSK
GEFDYFAGGANDMATLRENRAAYRRLRLRPRVLRDVSSVDTTRTVLGERM
AHPIGISPTAEHRAAHDDGELATARAAAGTCSMMAVSSSATTALEDVATA
GGPNMRRWFQLSLSSRKNRTVLAGLVRRANAAGYTALVVTVDRPVLGRRE
ADLRNCYELAPRLAEGRVVSATGARIGRRPDGTMDLGQASDARPEAGKSL
NWDDVHWLRTICGDMKVFTKCFQ*
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mRNA from alignment at Ecto-sp8_S_contig10674:206..3275-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp8_S_contig10674.1045.1 ID=mRNA_Ecto-sp8_S_contig10674.1045.1|Name=mRNA_Ecto-sp8_S_contig10674.1045.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=3070bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10674:206..3275- (Ectocarpus species8 EcLAC_412)
ATGGGGAGGCTCGAAGATCAAAGCGCTACTGCTTCTGCTGCCTCTGCTGG TATGCCCCTACCAACGCCGAAGAGTGGTGAGGCTTTGGTATTAATTCCGA ATACGGTACCGCAACTGTACGCATTCATTCTTATATTAGAGGACCTTCGT TCTGTGTCGGCGAACGAAAGAACGAAATGATGCGAGGACGTATGGGTGGC GGTACTTGCCTACACTAGCCTCGTTACAATACCAAACGTTCTCAGCCACG TTATAAACCTTACCCTGGACACACATCTGGTTGAGGAGGAAGCCATTCAT CACGTACATATTTATGTTTGCTGCATGTTGGCATGTTGGGTGTACATAGT CTACCCAACTCTCGCGGTGTCGTATTGTATGCATACGCTGCTGCACGGTT CTGCCGCTAAGATACTGCACGACCAGGATGCACGCGTGTCAACGTTGCGG ACTACGAACGACGTGCAAAGGTAGTACTGTCGAAAGGAGAGTTTGACTAC TTCGCAGGCGGTGCGAACGACATGGCTACTCTCAGGGAGAACAGGTGAGC AGGTTCTGCATGCAATGCATCCTCACATCGTCACACGATGAATGGTACGG TCATCATTTGTTCACGCTACGCATGCATCAGGTTGCACATAGCGTACAGC ATATATATCGTAGTCTAGCGCGCGGCAACACAGAGCCCCCGAACAATAGA GTTAACACACAGATGTTATTGCGGGCAGGCTCCGTTCCAAAATGACTACT GTAACAAAGAGGTGCGATTTGTTGACACATTTAGTTTAGGTGTACAAGGA CCCAACTCTTACGTCTCAAGAAAAAATCCTGGAGCTAGGGACAGGAACGA AATATGGTTTGAAGCACTTATTATCCTGTCGTCGATTTTGCGCAAGAGGA ACCTCTTGGGATACCGCTAGAGGTGAAAACTTCCGAACATACACGTGCTG TCTGATGGAAATTACAGTACAAATATTTTAATCTTCCGCAACGATGGGAC CAACGCGGAACATCGAGATACTGGTTGTTACCGGTCGGCATTGTTTTGAG ATTGAAGACAGACATGGACAACAACTGAGGGGGGTCTGGCAGTCCGAGGC AACCCGCAAGTAAGCACGGAGAACCGAAAGAAGAGAGGTACTGTAGTGTC ACATGAATGTGGGGATCTATTTCCCACCCATCTCGTCCACACAGAGCCAT CAAGTGGTACTAAAATACTCCTTCCCACCGTTTCAAAGCAAGGACGATGG GCGACTGGTCTCAATGTTATTTCGCGTCGCTTCAGGGCTGCGTACAGGCG TCTGCGGCTACGGCCTCGCGTGCTGAGAGACGTGTCTTCAGTCGACACCA CACGCACGGTGCTAGGTGAACGCATGGCGCATCCCATCGGAATCTCGCCC ACAGGTGATTGGGGTAATAGTTTCGTCTTGCTTGTTCCGTACCATGTACC GTTGAGTTGTTTGAAAACAGTAAATAAGCGTGCAGACACCGCTTGTGAAA GCTGAATACAATGTCACTACGTTCCTTCAGCTGAGCTAAATAGGTGCGAC TGATGTCCACAAATTCGGTGGAAGTGTCAGAGAAATAGACTGGTGCCGCA CTGAGGTGTATGAGCGAATTGGGCTCTTCGTTTTGTCACCGAAGCCAATC ACACGGCGACTTCTTTTGCATAAGCCGTGCCAGAGACTAGCAGACGTGGT CCTTGTTCCTGGCCCTCCCTCACAGTACTGTCAATAATATGTGCACCCAA TGAATGCTCGCTAATCGCGCTTCTGTGTTTGAGCTCGATAAGGACAATAA CATTTTCCCCCACCACACGACTACGGCCACTATTTACCGCTGCTACTGCG GTCGCTTCTTGTTGCTGCGCGTGCTGCTGTCTCATCACCAATGCTGCAAG CTGAACACCGCGCTGCCCATGACGACGGTGAGTTGGCCACGGCAAGGGCT GCTGCCGGGACTTGTTCGATGATGGCGGTGAGCTCGTCGGCGACGACCGC CCTGGAGGATGTGGCCACCGCCGGTGGTCCCAACATGCGGCGCTGGTTTC AGCTTTCGCTGTCATCGCGCAAGGTACTACATAGATTGATTGTTGTTGTT GTCGTTGTTGTTGTTGTCTTCGGATTATAAACCGTTCCGATCTCTCTACC CGGTACCTTCATCTGTCTATACTGATCAAACACTTGACCGGTCGATACCA CGTCTTGATATGGCATGCAGGATGCCATCGTATTGCAATGCTACGAGCTT TGATGTACTTCCTGTACCCTGATGACCAAATGTCCCTATTCGTCTACTGC ATGGCCCCAGGCAATACGCCTACTCGACTTGGCTGTTCACTTCCTTCCCC CCCCCCTACCCCCTTCATTCGCTGTGGTCCGTTCATTTTGCACCACAATT TGATTATCTTTGAAACAAAAGAACAGAACGGTGCTCGCCGGGCTCGTTAG GCGAGCCAACGCGGCCGGGTACACCGCGCTTGTCGTTACCGTGGATCGCC CCGTGCTAGGCCGGAGGGAGGCGGATCTGCGGAACTGCTACGAGTTGGCC CCTAGGCTTGCGGAGGGCCGAGTGGTATCGGCAACGGGGGCACGCATCGG TCGCCGTCCCGACGGAACCATGGACTTGGTCAGCAAACAGTTTGTCACAG TCAAAGCTGTTGTTCACGCCAAATAGCCGGAAGCATACACACTGCAGGTC ATTTTGGATGACCGTTCCGAGCTCTGGGTCGCCTGGCGCTCTCGGAATAA GTTCAGTGTACGGCATGCCGTTGTTGTGCACGAATCGTGCTCCACTCTCA TACATCCCATACCCGGGAGGGAGTGTTCTGGCACATCAGAGATAGATGTG TCCCACCTTTTTCCCCTTACACTGGCAGCTAGCTGCCTGTATGATACGTT TGTGTTCCCGTCTTTGCTGTACACTGAACAGCTGCTGTTGTTCGTGGTTC TTGCAGGGACAGGCGTCTGACGCTCGGCCTGAAGCAGGGAAGAGTCTGAA CTGGGACGACGTGCACTGGCTTAGAACTATCTGCGGGGACATGAAGGTAT TTACCAAATGTTTTCAGTGA
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Coding sequence (CDS) from alignment at Ecto-sp8_S_contig10674:206..3275-

>mRNA_Ecto-sp8_S_contig10674.1045.1 ID=mRNA_Ecto-sp8_S_contig10674.1045.1|Name=mRNA_Ecto-sp8_S_contig10674.1045.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=822bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10674:206..3275- (Ectocarpus species8 EcLAC_412)
ATGGGGAGGCTCGAAGATCAAAGCGCTACTGCTTCTGCTGCCTCTGCTGG
TATGCCCCTACCAACGCCGAAGAGTGATACTGCACGACCAGGATGCACGC
GTGTCAACGTTGCGGACTACGAACGACGTGCAAAGGTAGTACTGTCGAAA
GGAGAGTTTGACTACTTCGCAGGCGGTGCGAACGACATGGCTACTCTCAG
GGAGAACAGGGCTGCGTACAGGCGTCTGCGGCTACGGCCTCGCGTGCTGA
GAGACGTGTCTTCAGTCGACACCACACGCACGGTGCTAGGTGAACGCATG
GCGCATCCCATCGGAATCTCGCCCACAGCTGAACACCGCGCTGCCCATGA
CGACGGTGAGTTGGCCACGGCAAGGGCTGCTGCCGGGACTTGTTCGATGA
TGGCGGTGAGCTCGTCGGCGACGACCGCCCTGGAGGATGTGGCCACCGCC
GGTGGTCCCAACATGCGGCGCTGGTTTCAGCTTTCGCTGTCATCGCGCAA
GAACAGAACGGTGCTCGCCGGGCTCGTTAGGCGAGCCAACGCGGCCGGGT
ACACCGCGCTTGTCGTTACCGTGGATCGCCCCGTGCTAGGCCGGAGGGAG
GCGGATCTGCGGAACTGCTACGAGTTGGCCCCTAGGCTTGCGGAGGGCCG
AGTGGTATCGGCAACGGGGGCACGCATCGGTCGCCGTCCCGACGGAACCA
TGGACTTGGGACAGGCGTCTGACGCTCGGCCTGAAGCAGGGAAGAGTCTG
AACTGGGACGACGTGCACTGGCTTAGAACTATCTGCGGGGACATGAAGGT
ATTTACCAAATGTTTTCAGTGA
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