mRNA_Ecto-sp8_S_contig10674.1045.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig10674.1045.1 vs. uniprot
Match: D7FMI7_ECTSI (Glycolate Oxidase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMI7_ECTSI) HSP 1 Score: 503 bits (1294), Expect = 3.830e-177 Identity = 259/270 (95.93%), Postives = 261/270 (96.67%), Query Frame = 1
Query: 1 MGRLEDQSATASAASAGMPLPTPKSDTARPGCTRVNVADYERRAKVVLSKGEFDYFAGGANDMATLRENRAAYRRLRLRPRVLRDVSSVDTTRTVLGERMAHPIGISPTAEHRAAHDDGELATARAAAGTCSMMAVSSSATTALEDVATAGGPNMRRWFQLSLSSRKNRTVLAGLVRRANAAGYTALVVTVDRPVLGRREADLRNCYELAPRLAEGRVVSATGARIGRRPDGTMDLGQASDARPEAGKSLNWDDVHWLRTICGDMKVFTK 810
MGRLE QSATASAAS GMPLPTPKSDTARPGCT VNVADYERRAKVVL KGEFDYFAGGANDM TLRENRAAYRRLRLRPRVLRDVSSVDTTRTVLGERMAHPIGISPTAEHRAAHDDGELATARAAAGTCSMM VSSSATTALEDVATAGGPNM+RWFQLSLSSRKNRTVLAGLVRRA AAGYTALVVTVDRPVLGRREADLRNCYELAPRLAEGRVVSATGARIGRRPDGTMDLGQASDARPEAGKSLNWDDVHWLRTICGDMK+ K
Sbjct: 1 MGRLEGQSATASAASTGMPLPTPKSDTARPGCTHVNVADYERRAKVVLPKGEFDYFAGGANDMVTLRENRAAYRRLRLRPRVLRDVSSVDTTRTVLGERMAHPIGISPTAEHRAAHDDGELATARAAAGTCSMMVVSSSATTALEDVATAGGPNMQRWFQLSLSSRKNRTVLAGLVRRAIAAGYTALVVTVDRPVLGRREADLRNCYELAPRLAEGRVVSATGARIGRRPDGTMDLGQASDARPEAGKSLNWDDVHWLRTICGDMKIVVK 270
BLAST of mRNA_Ecto-sp8_S_contig10674.1045.1 vs. uniprot
Match: D8LDI6_ECTSI (Glycolate Oxidase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDI6_ECTSI) HSP 1 Score: 251 bits (640), Expect = 3.780e-78 Identity = 136/240 (56.67%), Postives = 170/240 (70.83%), Query Frame = 1
Query: 91 GCTRVNVADYERRAKVVLSKGEFDYFAGGANDMATLRENRAAYRRLRLRPRVLRDVSSVDTTRTVLGERMAHPIGISPTAEHRAAHDDGELATARAAAGTCSMMAVSSSATTALEDVATAGGPNMRRWFQLSLSSRKNRTVLAGLVRRANAAGYTALVVTVDRPVLGRREADLRNCYELAPRLAEGRVVSATGARIGRRPDGTMDLGQASDARPEAGKSLNWDDVHWLRTICGDMKVFTK 810
G VNV ++ER A+++LSK FDY+A GANDM TLRENRAA+ RLRLRPR+LRDVS VDT+ +VLG++++ PI I+PTA R AHD GE ATA AAA ++M +SS +TT+LEDVA AGGP RWFQL + K+R + LV+RA AAGYTAL VTVD PVLGRREAD+RN ++L L G VSA GA DG D G A+ ++L+W+D+ WLRTICG MK+ K
Sbjct: 23 GWEPVNVREFERHAQLMLSKNAFDYYASGANDMVTLRENRAAFNRLRLRPRILRDVSMVDTSTSVLGQKISSPICIAPTAMQRMAHDSGECATAGAAAKAGALMTLSSWSTTSLEDVAKAGGPGGARWFQLYVY--KDRKITEQLVKRALAAGYTALAVTVDTPVLGRREADMRNRFKLPEHLTMGNFVSAGGAHASGTKDGGNDSGLAAYVASLIDRTLDWNDIKWLRTICGSMKIVVK 260
BLAST of mRNA_Ecto-sp8_S_contig10674.1045.1 vs. uniprot
Match: A0A6V1QYU9_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1QYU9_HETAK) HSP 1 Score: 216 bits (550), Expect = 1.170e-64 Identity = 125/246 (50.81%), Postives = 161/246 (65.45%), Query Frame = 1
Query: 82 ARPGCTRVNVADYERRAKVVLSKGEFDYFAGGANDMATLRENRAAYRRLRLRPRVLRDVSSVDTTRTVLGERMAHPIGISPTAEHRAAHDDGELATARAAAGTCSMMAVSSSATTALEDVATAGG---PNMRRWFQLSLSSRKNRTVLAGLVRRANAAGYTALVVTVDRPVLGRREADLRNCYELAPRLAEGRVVSATGARIGRRPDGTMDLGQASDARPEAGKSLNWDDVHWLRTICGDMKVFTK 810
A+ G VNV +YE A + K FDY+A GANDM TLRENRAAY+RLR+RPR+LRDVS VD + T+LG++++ PI ++P+A R AH+DGE ATARA A + ++M +SS +T ALE+VA AG P+ RWFQL + K+R V+ LVRRA AAGY A VTVD PVLGRREAD+RN ++L L G S GA DG D G A+ ++LNW+D+ WL+ MKV K
Sbjct: 18 AKSGWEPVNVREYEAHAAEYMPKNAFDYYASGANDMITLRENRAAYQRLRMRPRILRDVSKVDISTTILGDKISSPICVAPSAMQRMAHEDGENATARACAKSGTLMTLSSWSTIALEEVAQAGAAAEPSAPRWFQLYVY--KDRDVVLDLVRRAEAAGYKAFAVTVDTPVLGRREADVRNRFKLPTHLTMGNFASKGGAHASGTKDGGKDSGLAAYVAGLIDRTLNWEDIAWLKRNTF-MKVVVK 260
BLAST of mRNA_Ecto-sp8_S_contig10674.1045.1 vs. uniprot
Match: A0A836CMB2_9STRA (Glycolate oxidase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMB2_9STRA) HSP 1 Score: 209 bits (532), Expect = 6.400e-62 Identity = 120/233 (51.50%), Postives = 157/233 (67.38%), Query Frame = 1
Query: 91 GCTRVNVADYERRAKVVLSKGEFDYFAGGANDMATLRENRAAYRRLRLRPRVLRDVSSVDTTRTVLGERMAHPIGISPTAEHRAAHDDGELATARAAAGTCSMMAVSSSATTALEDVATA--GGPNMRRWFQLSLSSRKNRTVLAGLVRRANAAGYTALVVTVDRPVLGRREADLRNCYELAPRLAEGRVVSATGARIGRRPDGTMDLGQASDARPEAGKSLNWDDVHWLRTI 783
G V+V +YE+ A+++L K FDY+A GANDM TLRENRAA+ RLR+RPR++RDVSS TVLG + PI I+P+A R AHDDGE AT+ AA + ++M +SS +TT LE+VA A GGP RWFQL + K+R + A LV+RA A+GYTAL VTVD PVLGRREAD+RN ++L L G + A GA DG D G ++ ++L+WDD+ WLR+I
Sbjct: 26 GWEPVSVREYEKAAEMMLPKNAFDYYASGANDMITLRENRAAFSRLRIRPRIMRDVSSTSNKTTVLGIPVNSPICIAPSAMQRMAHDDGEKATSAAAGKSNTLMTLSSWSTTPLEEVAAAYPGGP---RWFQLYVY--KDRKLTAELVKRAEASGYTALAVTVDTPVLGRREADVRNRFKLPVHLTMGNFIGAGGAHAEGTKDGGKDSGLSAYVASLIDRTLSWDDIRWLRSI 253
BLAST of mRNA_Ecto-sp8_S_contig10674.1045.1 vs. uniprot
Match: W7UBQ6_9STRA (Peroxisomal glycolate oxidase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7UBQ6_9STRA) HSP 1 Score: 206 bits (525), Expect = 5.920e-61 Identity = 117/228 (51.32%), Postives = 149/228 (65.35%), Query Frame = 1
Query: 103 VNVADYERRAKVVLSKGEFDYFAGGANDMATLRENRAAYRRLRLRPRVLRDVSSVDTTRTVLGERMAHPIGISPTAEHRAAHDDGELATARAAAGTCSMMAVSSSATTALEDVATAGGPNMRRWFQLSLSSRKNRTVLAGLVRRANAAGYTALVVTVDRPVLGRREADLRNCYELAPRLAEGRVVSATGARIGRRPDGTMDLGQASDARPEAGKSLNWDDVHWLRTIC 786
VN+ ++E AK L K FDY+A GANDM TLRENRAA+ RLR+RPR+LRDVS VDT TVLG+ +A PI ++PTA R A +GELATARA A ++M +SS +TT++EDVA A + +WFQL + K+R + A L RRA AGY AL +TVD PVLGRREAD+RN ++L L A G+ DG D G A+ ++L W DV WLR+IC
Sbjct: 26 VNIREFEAYAKATLPKNAFDYYASGANDMITLRENRAAFERLRMRPRILRDVSHVDTRTTVLGDPVAFPICVAPTAMQRMASPEGELATARACARQQTLMTLSSWSTTSVEDVAAAAP--IPKWFQLYVY--KDRELTAELARRAERAGYKALAITVDTPVLGRREADVRNRFKLPAHLTMANFAGAGGSHAEGTKDGGKDSGLAAYVASLIDRTLQWKDVQWLRSIC 249
BLAST of mRNA_Ecto-sp8_S_contig10674.1045.1 vs. uniprot
Match: A0A7R9UGG8_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UGG8_9STRA) HSP 1 Score: 192 bits (487), Expect = 2.950e-55 Identity = 119/253 (47.04%), Postives = 153/253 (60.47%), Query Frame = 1
Query: 55 PLPTPKSDTARPGCTRVNVADYERRAKVVLSKGEFDYFAGGANDMATLRENRAAYRRLRLRPRVLRDVSSVDTTRTVLGERMAHPIGISPTAEHRAAHDDGELATARAAAGTCSMMAVSSSATTALEDVATAGGPNMRRWFQLSLSSRKNRTVLAGLVRRANAAGYTALVVTVDRPVLGRREADLRNCYELAPRLAEGRVVSATGARI-GRRPDGTMDLGQASDARPEAGKSLNWDDVHWLRTICGDMKVFTK 810
P P+ G T VN+ +YE AK + + +DY+A GA DM TLRENRAA+ RLR RPR+LRDVSS+DT TVLG++++ PI I+PTA + AH DGE ATARAA ++M +SS +T +LE+VA P+ RWFQL + K+R V LVRRA GY AL VTVD PVLGRREAD+RN + L L G GA G + G G AS ++L W+D+ WLR +K+ K
Sbjct: 11 PAQEPRYTPTGAGPTPVNLKEYEAFAKNNMPRNAWDYYASGALDMITLRENRAAWGRLRFRPRILRDVSSIDTATTVLGQKVSMPICIAPTAMQQMAHPDGERATARAARKKGALMTLSSWSTLSLEEVAEEA-PDSFRWFQLYVY--KDRDVTLDLVRRAERNGYKALAVTVDTPVLGRREADVRNRFSLPSHLTMGNFAGVGGAHSSGTKSSGAEGSGLASYCASLIDRTLTWEDLRWLRANTS-LKIVVK 259
BLAST of mRNA_Ecto-sp8_S_contig10674.1045.1 vs. uniprot
Match: A0A7S2V919_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V919_9STRA) HSP 1 Score: 189 bits (480), Expect = 7.690e-55 Identity = 107/211 (50.71%), Postives = 141/211 (66.82%), Query Frame = 1
Query: 187 MATLRENRAAYRRLRLRPRVLRDVSSVDTTRTVLGERMAHPIGISPTAEHRAAHDDGELATARAAAGTCSMMAVSSSATTALEDVATAGGPNMRRWFQLSLSSRKNRTVLAGLVRRANAAGYTALVVTVDRPVLGRREADLRNCYELAPRLAEGRVVSATGARIGRRPDGTMDLGQASDARPEAGKSLNWDDVHWLRTICGDMKVFTKCFQ 819
M TLRENRA Y RLRLRPR++RDVS D++ TVLG++++ PI ++P+A R AHDDGE AT++A A T ++M +SS +TTALE+V+ A P RWFQL + K+R V LVRRA AAGY AL VTVD PVLGRREAD+RN ++L P L G V G+ DG D G A+ ++LNW+D+ WLR++ +K+ K Q
Sbjct: 1 MITLRENRAGYTRLRLRPRIMRDVSQTDSSTTVLGDKVSSPICVAPSAMQRMAHDDGECATSKACAKTGTLMTLSSWSTTALEEVSDAA-PGGLRWFQLYVY--KDRVVTLDLVRRAEAAGYKALAVTVDTPVLGRREADVRNRFKLPPHLTMGNFVGKGGSHAEGTKDGGKDSGLAAYVASLIDRTLNWEDIQWLRSVTS-LKIVVKGVQ 207
BLAST of mRNA_Ecto-sp8_S_contig10674.1045.1 vs. uniprot
Match: A0A2R6X967_MARPO ((S)-2-hydroxy-acid oxidase n=3 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6X967_MARPO) HSP 1 Score: 189 bits (480), Expect = 2.230e-54 Identity = 113/243 (46.50%), Postives = 161/243 (66.26%), Query Frame = 1
Query: 82 ARPGCTRVNVADYERRAKVVLSKGEFDYFAGGANDMATLRENRAAYRRLRLRPRVLRDVSSVDTTRTVLGERMAHPIGISPTAEHRAAHDDGELATARAAAGTCSMMAVSSSATTALEDVATAGGPNMRRWFQLSLSSRKNRTVLAGLVRRANAAGYTALVVTVDRPVLGRREADLRNCYELAPRLAEGRVVSATGARIGRRPDGTMDLGQASDARPEAGKSLNWDDVHWLRTICGDMKVFTK 810
A P T NV ++E AK L K +DY+A GA D TL+ENR A+ R+R RPR+L DV++VDT+ T+LG +++ PI ++PTA R AH +GELATARA A ++M +SS AT+++E+VA+ G P +R +FQL + K+R V+A LVRRA AG+TA+ +TVD P+LGRREAD++N + L P L + + G +G+ + T D G AS + KSL+W DV WL++I M + K
Sbjct: 2 ANPAATITNVCEFEEVAKQKLPKMVYDYYASGAEDQWTLKENRHAFERIRFRPRILIDVTNVDTSTTILGHKVSMPIMVAPTAMQRMAHPEGELATARAVASHDTIMTLSSWATSSVEEVASTG-PGIR-FFQLYVY--KDRNVVAQLVRRAEKAGFTAIALTVDTPILGRREADIKNRFSLPPHLT---LKNFEGLDLGQM-EKTQDSGLASYVAGQIDKSLSWKDVKWLQSITS-MPILVK 235
BLAST of mRNA_Ecto-sp8_S_contig10674.1045.1 vs. uniprot
Match: A0A7S2FX59_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FX59_9STRA) HSP 1 Score: 187 bits (476), Expect = 5.290e-54 Identity = 110/223 (49.33%), Postives = 139/223 (62.33%), Query Frame = 1
Query: 142 LSKGEFDYFAGGANDMATLRENRAAYRRLRLRPRVLRDVSSVDTTRTVLGERMAHPIGISPTAEHRAAHDDGELATARAAAGTCSMMAVSSSATTALEDVATAGGPNMRRWFQLSLSSRKNRTVLAGLVRRANAAGYTALVVTVDRPVLGRREADLRNCYELAPRLAEGRVVSATGARIGRRPDGTMDLGQASDARPEAGKSLNWDDVHWLRTICGDMKVFTK 810
L K FDY+A GANDM TLRENRAA+ RLR+RPR+LR+V V+ T+LG++++ PI +SPTA + AH DGELATARAA ++M +SS +T LE+VA A P RWFQL + K+R V L++RA AAGY AL VTVD PVLGRREAD+RN + L L G + G G A K+LNWDD+ WLR + MK+ K
Sbjct: 3 LDKNAFDYYASGANDMITLRENRAAFTRLRMRPRILRNVEHVNMETTILGDKVSMPILLSPTAMQQMAHADGELATARAAQKAGTLMTLSSWSTLPLEEVAAAA-PGGLRWFQLYVY--KDREVTLDLIKRAEAAGYKALAVTVDTPVLGRREADVRNKFSLPAHLTMGNFANTGGDHASGTKASDGGSGLAKYVASLIDKTLNWDDIQWLRKVT-TMKIVVK 221
BLAST of mRNA_Ecto-sp8_S_contig10674.1045.1 vs. uniprot
Match: A0A024UNA0_9STRA (FMN hydroxy acid dehydrogenase domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UNA0_9STRA) HSP 1 Score: 187 bits (474), Expect = 9.470e-54 Identity = 106/227 (46.70%), Postives = 144/227 (63.44%), Query Frame = 1
Query: 103 VNVADYERRAKVVLSKGEFDYFAGGANDMATLRENRAAYRRLRLRPRVLRDVSSVDTTRTVLGERMAHPIGISPTAEHRAAHDDGELATARAAAGTCSMMAVSSSATTALEDVATAGGPNMRRWFQLSLSSRKNRTVLAGLVRRANAAGYTALVVTVDRPVLGRREADLRNCYELAPRLAEGRVVSATGARIGRRPDGTMDLGQASDARPEAGKSLNWDDVHWLRTI 783
++V ++E AK L K DY+A GA+DM TL+ENR A++RL+L PRVLRDV +DT+ TVLG+ + P+ I+P A R AH DGELA+ RAAA + +S+ +TT+LEDVA A GPN RWFQL + K+R + LV RA AGY ALV+TVD P+LG R+ADLRN ++L L+ GR G ++G ++ A +L W DV WL++I
Sbjct: 11 LSVDEFEEHAKAFLPKPALDYYASGADDMLTLKENRLAFQRLKLMPRVLRDVRHIDTSTTVLGQPIKTPVCIAPAAMQRMAHPDGELASTRAAAAAGACYILSTVSTTSLEDVAAANGPNALRWFQLYIF--KDRELTRSLVERAERAGYKALVLTVDTPILGNRQADLRNGFKLPSHLSMANFAG------GRHATGINEVGLSAYATELFDTNLTWADVAWLKSI 229 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig10674.1045.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig10674.1045.1 >prot_Ecto-sp8_S_contig10674.1045.1 ID=prot_Ecto-sp8_S_contig10674.1045.1|Name=mRNA_Ecto-sp8_S_contig10674.1045.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=274bp MGRLEDQSATASAASAGMPLPTPKSDTARPGCTRVNVADYERRAKVVLSKback to top mRNA from alignment at Ecto-sp8_S_contig10674:206..3275- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig10674.1045.1 ID=mRNA_Ecto-sp8_S_contig10674.1045.1|Name=mRNA_Ecto-sp8_S_contig10674.1045.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=3070bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10674:206..3275- (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig10674:206..3275- >mRNA_Ecto-sp8_S_contig10674.1045.1 ID=mRNA_Ecto-sp8_S_contig10674.1045.1|Name=mRNA_Ecto-sp8_S_contig10674.1045.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=822bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10674:206..3275- (Ectocarpus species8 EcLAC_412)back to top |