mRNA_Ecto-sp8_S_contig106727.1043.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig106727.1043.1 vs. uniprot
Match: A6EYB7_9GAMM (D-amino-acid dehydrogenase n=9 Tax=Gammaproteobacteria TaxID=1236 RepID=A6EYB7_9GAMM) HSP 1 Score: 316 bits (809), Expect = 3.220e-105 Identity = 156/166 (93.98%), Postives = 162/166 (97.59%), Query Frame = 1
Query: 1 AVTPDEMLAIEPTLAGSYYGGFFTESDSTGDIHKFTNGLADAILRLGVKTYYGHSVTELSADGSHAWVTSHDGEQQTRDTFDGVVICAGVGSRALAAKLGDRVNIYPVKGYSITVELDDQASQDAAPTVSLLDDATKIVTSRLGDDRFRVAGTAEFSGSNRDIRDD 498
AVTP+EM AIEPTLAG+YYGGF+TESDSTGDIHKFTNGLA+AILRLGVKT YGHSVTELSADGSHAWVTSHDGE+QTRDTFDGVVICAGVGSR LAAKLGDRVNIYPVKGYSITVELDDQASQ+AAPTVSLLDDATKIVTSRLGDDRFRVAGTAEFSG NRDIRDD
Sbjct: 165 AVTPEEMRAIEPTLAGTYYGGFYTESDSTGDIHKFTNGLAEAILRLGVKTCYGHSVTELSADGSHAWVTSHDGEEQTRDTFDGVVICAGVGSRELAAKLGDRVNIYPVKGYSITVELDDQASQEAAPTVSLLDDATKIVTSRLGDDRFRVAGTAEFSGYNRDIRDD 330
BLAST of mRNA_Ecto-sp8_S_contig106727.1043.1 vs. uniprot
Match: A0A7G2RW01_9GAMM (D-amino acid dehydrogenase n=7 Tax=Marinobacter TaxID=2742 RepID=A0A7G2RW01_9GAMM) HSP 1 Score: 305 bits (781), Expect = 5.600e-101 Identity = 152/166 (91.57%), Postives = 159/166 (95.78%), Query Frame = 1
Query: 1 AVTPDEMLAIEPTLAGSYYGGFFTESDSTGDIHKFTNGLADAILRLGVKTYYGHSVTELSADGSHAWVTSHDGEQQTRDTFDGVVICAGVGSRALAAKLGDRVNIYPVKGYSITVELDDQASQDAAPTVSLLDDATKIVTSRLGDDRFRVAGTAEFSGSNRDIRDD 498
AVTP+EM +IEPTLAG+YYGGF+TESDSTGDIHKFTNGLA+AILRLGVKT Y HSVTELSAD SHAWVTS DGE+QTRDTFDGVVICAGVGSR LAAKLGDRVNIYPVKGYSITVELDDQASQ+AAPTVSLLDDATKIVTSRLGDDRFRVAGTAEFSG NRDIRDD
Sbjct: 165 AVTPEEMRSIEPTLAGTYYGGFYTESDSTGDIHKFTNGLAEAILRLGVKTCYEHSVTELSADQSHAWVTSFDGEEQTRDTFDGVVICAGVGSRELAAKLGDRVNIYPVKGYSITVELDDQASQEAAPTVSLLDDATKIVTSRLGDDRFRVAGTAEFSGYNRDIRDD 330
BLAST of mRNA_Ecto-sp8_S_contig106727.1043.1 vs. uniprot
Match: A0A1E7PZF1_9GAMM (D-amino acid dehydrogenase n=7 Tax=root TaxID=1 RepID=A0A1E7PZF1_9GAMM) HSP 1 Score: 300 bits (768), Expect = 5.200e-99 Identity = 148/166 (89.16%), Postives = 159/166 (95.78%), Query Frame = 1
Query: 1 AVTPDEMLAIEPTLAGSYYGGFFTESDSTGDIHKFTNGLADAILRLGVKTYYGHSVTELSADGSHAWVTSHDGEQQTRDTFDGVVICAGVGSRALAAKLGDRVNIYPVKGYSITVELDDQASQDAAPTVSLLDDATKIVTSRLGDDRFRVAGTAEFSGSNRDIRDD 498
AVTPDEM AIEPTLAGSYYGGF+TESDSTGDIHKFTNGLA+AILRLGVKT YGH+VTEL+AD SHAWVTS DGEQQTR+T+DGVVICAGVGSRALAAKLGDRVNIYPVKGYSITVEL+D+ASQ AAPTVSLLDDATK+VTSRLGD RFRVAGTAEF+G NR+IRDD
Sbjct: 165 AVTPDEMRAIEPTLAGSYYGGFYTESDSTGDIHKFTNGLAEAILRLGVKTCYGHTVTELNADQSHAWVTSFDGEQQTRETYDGVVICAGVGSRALAAKLGDRVNIYPVKGYSITVELEDEASQQAAPTVSLLDDATKLVTSRLGDTRFRVAGTAEFNGYNRNIRDD 330
BLAST of mRNA_Ecto-sp8_S_contig106727.1043.1 vs. uniprot
Match: R8B0C9_9GAMM (D-amino acid dehydrogenase small subunit n=3 Tax=Marinobacter TaxID=2742 RepID=R8B0C9_9GAMM) HSP 1 Score: 298 bits (762), Expect = 3.610e-98 Identity = 147/166 (88.55%), Postives = 157/166 (94.58%), Query Frame = 1
Query: 1 AVTPDEMLAIEPTLAGSYYGGFFTESDSTGDIHKFTNGLADAILRLGVKTYYGHSVTELSADGSHAWVTSHDGEQQTRDTFDGVVICAGVGSRALAAKLGDRVNIYPVKGYSITVELDDQASQDAAPTVSLLDDATKIVTSRLGDDRFRVAGTAEFSGSNRDIRDD 498
AVTPDEM AIEPTLAG+YYGGF+TESDSTGDIHKFTNGLADAILRLGV+T YGH+VTELSAD +HAWVT+ DGEQQ RDTFDGVVICAGVGSR+LAAKLGDRVNIYPVKGYSITVELDD+ S+ +APTVSLLDDATKIVTSRLGD RFRVAGTAEFSG NRDIRDD
Sbjct: 165 AVTPDEMRAIEPTLAGTYYGGFYTESDSTGDIHKFTNGLADAILRLGVRTCYGHTVTELSADQNHAWVTADDGEQQNRDTFDGVVICAGVGSRSLAAKLGDRVNIYPVKGYSITVELDDEDSRKSAPTVSLLDDATKIVTSRLGDGRFRVAGTAEFSGYNRDIRDD 330
BLAST of mRNA_Ecto-sp8_S_contig106727.1043.1 vs. uniprot
Match: UPI0019D492A1 (D-amino acid dehydrogenase n=1 Tax=Marinobacter sp. LPB0319 TaxID=2769486 RepID=UPI0019D492A1) HSP 1 Score: 296 bits (758), Expect = 1.250e-97 Identity = 145/165 (87.88%), Postives = 154/165 (93.33%), Query Frame = 1
Query: 4 VTPDEMLAIEPTLAGSYYGGFFTESDSTGDIHKFTNGLADAILRLGVKTYYGHSVTELSADGSHAWVTSHDGEQQTRDTFDGVVICAGVGSRALAAKLGDRVNIYPVKGYSITVELDDQASQDAAPTVSLLDDATKIVTSRLGDDRFRVAGTAEFSGSNRDIRDD 498
VTPDEM AIEPTLAG+YYGGF+TESDSTGDIHKFTNGLA+AI RLGVKT YGHSV E+SAD HAW+T+HDG+ QTRDTFDGVVICAGVGSR+LAAKLGDRVNIYPVKGYSITVELDD+ASQ AAPTVSLLDD TKIVTSRLGD RFRVAGTAEFSG NRDIRDD
Sbjct: 166 VTPDEMRAIEPTLAGTYYGGFYTESDSTGDIHKFTNGLAEAIKRLGVKTNYGHSVIEVSADDQHAWITAHDGDDQTRDTFDGVVICAGVGSRSLAAKLGDRVNIYPVKGYSITVELDDEASQKAAPTVSLLDDETKIVTSRLGDGRFRVAGTAEFSGYNRDIRDD 330
BLAST of mRNA_Ecto-sp8_S_contig106727.1043.1 vs. uniprot
Match: A0A0K1UEV6_9GAMM (Amino acid dehydrogenase n=33 Tax=Marinobacter TaxID=2742 RepID=A0A0K1UEV6_9GAMM) HSP 1 Score: 292 bits (748), Expect = 4.340e-96 Identity = 144/166 (86.75%), Postives = 155/166 (93.37%), Query Frame = 1
Query: 1 AVTPDEMLAIEPTLAGSYYGGFFTESDSTGDIHKFTNGLADAILRLGVKTYYGHSVTELSADGSHAWVTSHDGEQQTRDTFDGVVICAGVGSRALAAKLGDRVNIYPVKGYSITVELDDQASQDAAPTVSLLDDATKIVTSRLGDDRFRVAGTAEFSGSNRDIRDD 498
+VTP+EM +IEPTLAG+YYGGFFTESDSTGDIHKFTNGLADAI RLGVKT YGH+VTELSAD +AWVT+HDG +Q+RDTFDGVVICAGVGSR LA KLGDRVNIYPVKGYSITVELDD+ASQ AAPTVSLLDDATKIVTSRLGD RFRVAGTAEFSG NRDI+DD
Sbjct: 165 SVTPEEMKSIEPTLAGNYYGGFFTESDSTGDIHKFTNGLADAIKRLGVKTCYGHTVTELSADERNAWVTAHDGTEQSRDTFDGVVICAGVGSRGLAKKLGDRVNIYPVKGYSITVELDDEASQKAAPTVSLLDDATKIVTSRLGDGRFRVAGTAEFSGYNRDIKDD 330
BLAST of mRNA_Ecto-sp8_S_contig106727.1043.1 vs. uniprot
Match: A0A0P7Z533_9GAMM (Glycine oxidase (Deaminating) n=1 Tax=Marinobacter sp. HL-58 TaxID=1479237 RepID=A0A0P7Z533_9GAMM) HSP 1 Score: 292 bits (748), Expect = 6.830e-96 Identity = 146/165 (88.48%), Postives = 154/165 (93.33%), Query Frame = 1
Query: 4 VTPDEMLAIEPTLAGSYYGGFFTESDSTGDIHKFTNGLADAILRLGVKTYYGHSVTELSADGSHAWVTSHDGEQQTRDTFDGVVICAGVGSRALAAKLGDRVNIYPVKGYSITVELDDQASQDAAPTVSLLDDATKIVTSRLGDDRFRVAGTAEFSGSNRDIRDD 498
VTP EM IEPTLAG+YYGGFFT+SDSTGDIHKFTNGLADAI RLGVKT YGHSVTELSAD SHAWVTS + +QTRDTFDGVVICAGVGSR LAAKLGDRVNIYPVKGYSITV+LDDQAS+++APTVSLLDDATKIVTSRLGDDRFRVAGTAEFSG NRDIRDD
Sbjct: 173 VTPAEMRDIEPTLAGTYYGGFFTDSDSTGDIHKFTNGLADAIERLGVKTCYGHSVTELSADQSHAWVTSEEDGEQTRDTFDGVVICAGVGSRELAAKLGDRVNIYPVKGYSITVQLDDQASRESAPTVSLLDDATKIVTSRLGDDRFRVAGTAEFSGFNRDIRDD 337
BLAST of mRNA_Ecto-sp8_S_contig106727.1043.1 vs. uniprot
Match: UPI001F015C16 (D-amino acid dehydrogenase n=1 Tax=Marinobacter similis TaxID=1420916 RepID=UPI001F015C16) HSP 1 Score: 291 bits (746), Expect = 1.590e-95 Identity = 143/165 (86.67%), Postives = 156/165 (94.55%), Query Frame = 1
Query: 4 VTPDEMLAIEPTLAGSYYGGFFTESDSTGDIHKFTNGLADAILRLGVKTYYGHSVTELSADGSHAWVTSHDGEQQTRDTFDGVVICAGVGSRALAAKLGDRVNIYPVKGYSITVELDDQASQDAAPTVSLLDDATKIVTSRLGDDRFRVAGTAEFSGSNRDIRDD 498
VTP+EM +IEPTLAG+YYGGF+TESDSTGDIHKFTNGLADAI R GVKT YGH+VTELSAD S AWVTS DG++QTR+T+DGVVICAGVGSRALAAKLGDRVNIYPVKGYSITVELDD+ASQ AAPTVSLLDDATK+VTSRLGDDRFRVAGTAEF+G NR+IRDD
Sbjct: 183 VTPEEMKSIEPTLAGTYYGGFYTESDSTGDIHKFTNGLADAIQRRGVKTNYGHTVTELSADASSAWVTSFDGKEQTRETYDGVVICAGVGSRALAAKLGDRVNIYPVKGYSITVELDDEASQQAAPTVSLLDDATKLVTSRLGDDRFRVAGTAEFNGYNRNIRDD 347
BLAST of mRNA_Ecto-sp8_S_contig106727.1043.1 vs. uniprot
Match: A0A0H4I2E3_9GAMM (Amino acid dehydrogenase n=19 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A0H4I2E3_9GAMM) HSP 1 Score: 290 bits (742), Expect = 3.730e-95 Identity = 142/166 (85.54%), Postives = 156/166 (93.98%), Query Frame = 1
Query: 1 AVTPDEMLAIEPTLAGSYYGGFFTESDSTGDIHKFTNGLADAILRLGVKTYYGHSVTELSADGSHAWVTSHDGEQQTRDTFDGVVICAGVGSRALAAKLGDRVNIYPVKGYSITVELDDQASQDAAPTVSLLDDATKIVTSRLGDDRFRVAGTAEFSGSNRDIRDD 498
AVTP+EM AIEPTLAG++YGGFFTESDSTGDIHKFT+GLADAI R GVKT YGH+VTELSAD SHAW+TS DGEQQ R+TFDGVV+CAGVGSR LAAKLGDRVNIYPVKGYSITVELDD+AS+ AAPTVSLLDDATK+VTSRLGDDRFR+AGTAEF+G NR+IRDD
Sbjct: 165 AVTPNEMKAIEPTLAGNFYGGFFTESDSTGDIHKFTSGLADAIQRRGVKTCYGHTVTELSADQSHAWITSFDGEQQIRNTFDGVVVCAGVGSRELAAKLGDRVNIYPVKGYSITVELDDEASRRAAPTVSLLDDATKLVTSRLGDDRFRIAGTAEFNGYNRNIRDD 330
BLAST of mRNA_Ecto-sp8_S_contig106727.1043.1 vs. uniprot
Match: UPI0011E62155 (D-amino acid dehydrogenase n=1 Tax=Marinobacter fonticola TaxID=2603215 RepID=UPI0011E62155) HSP 1 Score: 270 bits (690), Expect = 3.230e-87 Identity = 134/164 (81.71%), Postives = 145/164 (88.41%), Query Frame = 1
Query: 1 AVTPDEMLAIEPTLAGSYYGGFFTESDSTGDIHKFTNGLADAILRLGVKTYYGHSVTELSADGSHAWVTSHDGEQQTRDTFDGVVICAGVGSRALAAKLGDRVNIYPVKGYSITVELDDQASQDAAPTVSLLDDATKIVTSRLGDDRFRVAGTAEFSGSNRDIR 492
AVTP+EM AIEPTLAG+YYGGFFTESDSTGDIHKFT GLA A RLGV+T YGH+VT+L AD S AWVTS DGE + R FDG+V+CAGVGSRALAAKLGDRVNIYPVKGYSITV LD+ SQ++APTVSLLDD TKIVTSRLGDDRFRVAGTAEFSG NRDIR
Sbjct: 165 AVTPEEMRAIEPTLAGTYYGGFFTESDSTGDIHKFTQGLAAATERLGVETRYGHAVTDLGADQSRAWVTSSDGEDEQRHEFDGLVVCAGVGSRALAAKLGDRVNIYPVKGYSITVHLDEPQSQESAPTVSLLDDETKIVTSRLGDDRFRVAGTAEFSGYNRDIR 328 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig106727.1043.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig106727.1043.1 >prot_Ecto-sp8_S_contig106727.1043.1 ID=prot_Ecto-sp8_S_contig106727.1043.1|Name=mRNA_Ecto-sp8_S_contig106727.1043.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=160bp MLAIEPTLAGSYYGGFFTESDSTGDIHKFTNGLADAILRLGVKTYYGHSVback to top mRNA from alignment at Ecto-sp8_S_contig106727:3..500+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig106727.1043.1 ID=mRNA_Ecto-sp8_S_contig106727.1043.1|Name=mRNA_Ecto-sp8_S_contig106727.1043.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=498bp|location=Sequence derived from alignment at Ecto-sp8_S_contig106727:3..500+ (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig106727:3..500+ >mRNA_Ecto-sp8_S_contig106727.1043.1 ID=mRNA_Ecto-sp8_S_contig106727.1043.1|Name=mRNA_Ecto-sp8_S_contig106727.1043.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=480bp|location=Sequence derived from alignment at Ecto-sp8_S_contig106727:3..500+ (Ectocarpus species8 EcLAC_412)back to top |