mRNA_Ecto-sp8_S_contig10669.1035.1 (mRNA) Ectocarpus species8 EcLAC_412

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp8_S_contig10669.1035.1
Unique NamemRNA_Ecto-sp8_S_contig10669.1035.1
TypemRNA
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Homology
BLAST of mRNA_Ecto-sp8_S_contig10669.1035.1 vs. uniprot
Match: A0A6H5L969_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L969_9PHAE)

HSP 1 Score: 781 bits (2018), Expect = 4.870e-284
Identity = 385/414 (93.00%), Postives = 395/414 (95.41%), Query Frame = 1
Query:    1 MDKRVRWLWLSVSLCWMLYVLVVLCQRSASPASGGPVVSGKRTRSNSGETAYHRNYNHGNTHPSSSQRGHRQGKTVVVVMPSPPMVSGPSTRIDRLQTIRDTWGQDLMDAGENSVVFVMDETDAGTVEEALDTWGALETSPFPYPAGEDNNSKGLPTRRHRTLEQQREQGSETPRVLVVPDDVTRGGTDGDGRLRYVLARISEIYDPAFLFYCNEHTYVIAENLQCYTRVLDPSDPVYLGNRFRREGERDQQGKALLNSGAAGFVLSRGSLSLLHQAWRGGEGGGRADSLGGSVDHSGGHSDGEREERGPPTECVAKSNYERGNPGITLARCLAHLGVYAKDTTGSQGGQRFNAYGPVRLAQGKIDQWYKDVHASDPGMWRAGPDCCSSDTISFHYVGPAEARAMHHILHHRET 1242
            M KRVRWLWL VS+CWML VLVVLCQRSASPASGGPV+SGKRT SNSGETA+HRNY+HGNTHPSS QRGHRQ KTVVVVMPSPPMVSGPSTRIDR QTIRDTWGQDLMDAGENSVVFV+DE DAGTVEEAL TWGALETSPFPYP+GED NSKGLPTR HRTLEQQREQGSETPRVLVVPDDVTRGGTDGDGRLRYVLARISEIYDPAFLFYCNEHTYVIAENL CYTR LDPSDPVYLGNRFRRE ERDQ GKALLNSGAAGF+LSRGSLSLLHQAWR GEGGGRADSLGGSVDHSGGHSDG+ EERGPPTECVAKSNYERGNPGITLARCLAHL VYA DTTGSQGGQRFNAYGPVRLAQGKIDQWYKDVHASDPGMWRAGPDCCSSDTISFHYVGPAEARAMHHILHH++T
Sbjct:    1 MGKRVRWLWLCVSVCWMLCVLVVLCQRSASPASGGPVLSGKRTTSNSGETAHHRNYDHGNTHPSSRQRGHRQDKTVVVVMPSPPMVSGPSTRIDRFQTIRDTWGQDLMDAGENSVVFVVDEADAGTVEEALGTWGALETSPFPYPSGEDINSKGLPTRHHRTLEQQREQGSETPRVLVVPDDVTRGGTDGDGRLRYVLARISEIYDPAFLFYCNEHTYVIAENLLCYTRSLDPSDPVYLGNRFRRESERDQ-GKALLNSGAAGFILSRGSLSLLHQAWRDGEGGGRADSLGGSVDHSGGHSDGKGEERGPPTECVAKSNYERGNPGITLARCLAHLRVYAMDTTGSQGGQRFNAYGPVRLAQGKIDQWYKDVHASDPGMWRAGPDCCSSDTISFHYVGPAEARAMHHILHHKDT 413          
BLAST of mRNA_Ecto-sp8_S_contig10669.1035.1 vs. uniprot
Match: D7FS30_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS30_ECTSI)

HSP 1 Score: 470 bits (1210), Expect = 1.310e-163
Identity = 245/335 (73.13%), Postives = 248/335 (74.03%), Query Frame = 1
Query:  238 MPSPPMVSGPSTRIDRLQTIRDTWGQDLMDAGENSVVFVMDETDAGTVEEALDTWGALETSPFPYPAGEDNNSKGLPTRRHRTLEQQREQGSETPRVLVVPDDVTRGGTDGDGRLRYVLARISEIYDPAFLFYCNEHTYVIAENLQCYTRVLDPSDPVYLGNRFRREGERDQQGKALLNSGAAGFVLSRGSLSLLHQAWRGGEGGGRADSLGGSVDHSGGHSDGEREERGPPTECVAKSNYERGNPGITLARCLAHLGVYAKDTTGSQGGQRFNAYGPVRLAQGKIDQWYKDVHASDPGMWRAGPDCCSSDTISFHYVGPAEARAMHHILHHRET 1242
            MPSPPMVSGPSTRIDRLQTIRDTWGQDLMDAGEN                                                                                 RYVLARI EIYDP FLFYCNEHTYVIAENLQCYTR LDPSDPVYLGNRFRREGE++Q GKALLNSGAAGFVLSRGSLSLLHQAWRGGEGGGRADSLGGSVDHSGGHSDGE EERGPPTECVAKSNYERGNPGITLARCLAHLGVYAKDTTG+QGGQRFNAYGPVRLAQGKIDQWY DVHASDPGMWRAGPDCCSSDTISFHYVGPAEARAMHHILHHRET
Sbjct:    1 MPSPPMVSGPSTRIDRLQTIRDTWGQDLMDAGEN---------------------------------------------------------------------------------RYVLARIYEIYDPDFLFYCNEHTYVIAENLQCYTRSLDPSDPVYLGNRFRREGEKNQ-GKALLNSGAAGFVLSRGSLSLLHQAWRGGEGGGRADSLGGSVDHSGGHSDGEGEERGPPTECVAKSNYERGNPGITLARCLAHLGVYAKDTTGNQGGQRFNAYGPVRLAQGKIDQWYNDVHASDPGMWRAGPDCCSSDTISFHYVGPAEARAMHHILHHRET 253          
BLAST of mRNA_Ecto-sp8_S_contig10669.1035.1 vs. uniprot
Match: A0A7S1ZC17_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZC17_9STRA)

HSP 1 Score: 136 bits (342), Expect = 2.240e-33
Identity = 84/248 (33.87%), Postives = 126/248 (50.81%), Query Frame = 1
Query:  520 PRVLVVPDDVTRGGTDGDGRLRYVLARISEIYDPAFLFYCNEHTYVIAENLQCYTRVLDPSDPVYLGNRFRREGERDQQGKALLNSGAAGFVLSRGSLSLLHQAWRGGEGGGRADSLGGSVDHSGGHSDGEREERGPPTECVAKSN--YERGNPGITLARCLAH-LGVYAKDTTGSQGGQRFNAYGPVRLAQGKIDQWYKDVHASDPGMW----------RAGPDCCSSDTISFHYVGPAEARAMHHI 1224
            PR+L++P  +T     G  RL+YV+  ISE+ DP F F+ N+HT+VI E+L  Y    +P + +Y G+  +  G          NSGAAG++LSR ++  L + W                            E+ P  EC A++   + +GNPG+  ARCL+H L V A DT    G  RF+A+G VR+  GK+D WY   H +  G+           ++G  CC+  T+SFHYV  +E R++  +
Sbjct:   11 PRLLLIPSFITE--EKGVERLQYVIKTISEVIDPDFAFFVNDHTFVIPEHLCDYLIGSNPDEDIYAGHAMKDRGN-----DFAFNSGAAGYILSRVTMKRLGKKWS---------------------------EKDP--ECTAENAPAFIQGNPGLVTARCLSHILHVSALDTRDEYGRHRFHAFGLVRVIAGKVDDWYNKKHETLDGVLGVDNVHHHKLQSGTLCCAPRTVSFHYVEGSETRSLFEV 222          
BLAST of mRNA_Ecto-sp8_S_contig10669.1035.1 vs. uniprot
Match: F0YD67_AURAN (WW domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YD67_AURAN)

HSP 1 Score: 136 bits (342), Expect = 6.020e-31
Identity = 88/243 (36.21%), Postives = 123/243 (50.62%), Query Frame = 1
Query:  520 PRVLVVPDDVTRGGTDGDGRLRYVLARISEIYDPAFLFYCNEHTYVIAENLQCYTRVLDPSDPVYLGNRF-RREGERDQQGKALLNSGAAGFVLSRGSLSLLHQAWRGGEGGGRADSLGGSVDHSGGHSDGEREERGPPTECVAKSNYERGNPGITLARCLAHLGVYAKDTTGSQGGQRFNAYGPVRLAQGKIDQWYKDVHA----SDPGMWR--AGPDCCSSDTISFHYVGPAEARAMHHIL 1227
            P+ L+VP  +T     G  RL +VL R+S      F F  N+HT ++A NL C+ R LDP+  +Y G+   +R G++  +   + NSGA+G+VL+R +L LL  AW   +                           P     A S + +GNPG+ LARCLA  GV   DT  + G   F+A+GPVR + G +D WY+ +H     SDP      +G  CC   T+SFHYV  AE  A+H  L
Sbjct:  981 PKNLLVPATIT--DAMGTARLEWVLRRVSAA-GVDFAFMANDHTAILAPNLACFLRRLDPAAALYAGHALAQRNGKQPPE---VFNSGASGYVLTRATLDLLEAAWAAED---------------------------PTCSAAAASKWLQGNPGLVLARCLASRGVTPVDTRVA-GRHVFHAFGPVRTSTGGVDDWYRRMHEMLEFSDPPAHPLPSGAACCDGHTVSFHYVEAAEQVALHAAL 1189          
BLAST of mRNA_Ecto-sp8_S_contig10669.1035.1 vs. uniprot
Match: A0A1Z5JKF7_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JKF7_FISSO)

HSP 1 Score: 131 bits (329), Expect = 2.710e-30
Identity = 94/285 (32.98%), Postives = 136/285 (47.72%), Query Frame = 1
Query:  397 TWGALETSPFPYPAGEDNNSKGLPTRRHRTLEQQREQGSET---PRVLVVPDDVTRGGTDGDGRLRYVLARISEIYDPAFLFYCNEHTYVIAENLQCYTRVLDPSDPVYLGNRFRREGERDQQGKALLNSGAAGFVLSRGSLSLLHQAWRGGEGGGRADSLGGSVDHSGGHSDGEREERGPPTECVAKSNYERGNPGITLARCLAHLGVYAKDTTGSQGGQRFNAYGPVRLAQGKIDQWYKDVHAS---------DPGMWRAGPDCCSSDTISFHYVGPAEARAM 1215
            TWG    + F       +N    P   H T  +++E  S+T   P+ L++PD +  G  DG  RL Y +  I E  DP F F+ N+HT+VI E+L  Y   L+  D +Y G+  R  G+ D     + NSGAAG++LSRG++  L Q W                +H+      ++   GP       S + +GNPG+  A+CL  +G++A DT       RF+A+   R+  GK+D WY   H             G    G DCCS +T+SFHYV   E  A+
Sbjct:  131 TWGPYARAIFVL-----HNQTEFPQGSHLTFSEEKEP-SDTFSYPQTLLLPDMI--GVDDGLPRLFYTIRAIHERVDPDFCFFVNDHTFVIPEHLCTYLDGLNAEDDLYAGHALRN-GKED-----VFNSGAAGYLLSRGTMKKLMQKWD---------------EHA------DKCWVGPDA-----SAWLQGNPGLVTAQCLESIGIHAIDTREHNKWHRFHAFPLTRVVAGKVDGWYNKKHEGMEAFRGFDKSYGELLKGEDCCSKETVSFHYVEYLECMAL 375          
BLAST of mRNA_Ecto-sp8_S_contig10669.1035.1 vs. uniprot
Match: A0A7S4J8K6_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J8K6_9STRA)

HSP 1 Score: 121 bits (304), Expect = 1.390e-26
Identity = 81/253 (32.02%), Postives = 124/253 (49.01%), Query Frame = 1
Query:  508 GSETPRVLVVPDDVTRGGTDGDGRLRYVLARISEIYDPAFLFYCNEHTYVIAENLQCYTRVLDPSDPVYLGNRFRREGERDQQGKALLNSGAAGFVLSRGSLSLLHQAWRGGEGGGRADSLGGSVDHSGGHSDGEREERGPPTECVAK--SNYERGNPGITLARCLAH-LGVYAKDTTGSQGGQRFNAYGPVRLAQGKIDQWYKDVHAS-----------DPGMWRAGPDCCSSDTISFHYVGPAEARAMHHI 1224
            GS  P++LV+P+ +      G  RL++ +  I +  +P F F+ N+HT+V+ E+L  +    DP+  +Y G+  + E E    G A  NSGAAG+VLS+ ++  L + W                           +E+ P  +C+A+  + + + NPG+  A+CL   + V A DT    G  RF+A+G VR A G +D+WY   H                M   G DCCS DT+SFHYV  AE +  H +
Sbjct:  221 GSHYPQLLVLPESIKE--ESGVLRLQHTVRTIHDAINPDFAFFVNDHTFVMPEHLCLFLSGRDPTRELYAGHAMKNEKE----GYAF-NSGAAGYVLSKRTMGDLVKKW---------------------------DEKDP--KCLAEHAAKWLQSNPGLVTAKCLRESMHVNAVDTRDEGGRHRFHAFGLVRTAMGSVDEWYLKKHKGLDVIFGPDRHHHQHMPLKGVDCCSVDTVSFHYVEHAETKVFHAV 437          
BLAST of mRNA_Ecto-sp8_S_contig10669.1035.1 vs. uniprot
Match: K0TD75_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TD75_THAOC)

HSP 1 Score: 104 bits (260), Expect = 2.240e-21
Identity = 103/357 (28.85%), Postives = 147/357 (41.18%), Query Frame = 1
Query:  175 GNTHPSSSQRGHRQGKT-VVVVMPSPPMVSGPSTRIDRLQTIRDTWGQDLMDAGENSVVFVMDETDAGTVEEALDTWGALETSPFPYPAGEDNNSKGLPTRRHRTLEQQREQGSETPRVLVVPDDVTRGGTDGDGRLRYVLARISEIYDPAFLFYCNEHTYVIAENLQCYTRVLDPSDPVYLGNRFRREGERDQQGKALLNSGAAGFVLSRGSLSLLHQAWRGGEGGGRADSLGGSVDHSGGHSDGEREERGPPTECVAK--SNYERGNPGITLARCLAH-LGVYAKDTT-GSQGGQRFNAYGPVRLAQGKIDQWYKDVHASDPGMW----------RAGPDCCSSDTISFHYVGPA 1200
            G T P++      +G + V VV+PS   V  P  R  RL+ I  TWG       E   VFV+ E                      +P G + +S  L     RT           P+VL +P D+      G  RL Y +  +SE  +P+F+F+ N+HT+V+  +L  + +  D S   Y+G+  + +G          NSGAAG+VLSR +   L                              RE   P +EC     S + +GNPGI  A C +  L V  +DT  G      ++AYG VR    K+DQWY + HA   G+           + G  CCS +T+S   V  A
Sbjct:   68 GMTSPAAKTEPSTRGPSFVTVVLPS---VVKPEARPLRLKNIEKTWGP------EARAVFVVHEN-------------------IEFPQGAEIDSGSL----SRTF----------PQVLKLPSDIKVD--QGVERLLYSIRTVSETVNPSFIFFTNDHTFVLPNHLCRFLQKRDASKDAYVGHALKGKGT-----PVAFNSGAAGYVLSRQTYMRLI-----------------------------REMDDPKSECSPSNASKWLQGNPGILTATCFSKVLNVQVEDTRDGEDLSHVYHAYGLVRTVSAKVDQWYVNNHAPLDGILGVDAKYHHRLQQGEACCSENTVSEQLVALA 346          
BLAST of mRNA_Ecto-sp8_S_contig10669.1035.1 vs. uniprot
Match: A0A7S1ZMV4_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZMV4_TRICV)

HSP 1 Score: 80.9 bits (198), Expect = 2.640e-14
Identity = 53/165 (32.12%), Postives = 76/165 (46.06%), Query Frame = 1
Query:  772 NSGAAGFVLSRGSLSLLHQAWRGGEGGGRADSLGGSVDHSGGHSDGEREERGPPTECVAKS--NYERGNPGITLARCLAH-LGVYAKDTTGSQGGQRFNAYGPVRLAQGKIDQWYKDVHA-----------SDPGMWRAGPDCCSSDTISFHYVGPAEARAMHHI 1224
            NSGAAG+VLSR ++S L + W  G+                               C+A++   + +GNPG+  A+CL   + V A DT    G   F+A+G VR   GK+D+WY + H                M   G +CCSS T+SFHYV   E  A++ +
Sbjct:    2 NSGAAGYVLSRRTMSDLVRKWDEGD-----------------------------ARCLAENAPKWLQGNPGLVTAKCLRESMHVNAVDTRAEGGRHVFHAFGLVRTVSGKVDEWYLNKHRHLVAVFGPDGLGHQHMPLKGVECCSSKTVSFHYVETLETLALYEV 137          
BLAST of mRNA_Ecto-sp8_S_contig10669.1035.1 vs. uniprot
Match: A0A158R8N6_TAEAS (N-acetylgalactosaminide beta-1,3-galactosyltransferase n=1 Tax=Taenia asiatica TaxID=60517 RepID=A0A158R8N6_TAEAS)

HSP 1 Score: 71.6 bits (174), Expect = 1.000e-9
Identity = 51/210 (24.29%), Postives = 85/210 (40.48%), Query Frame = 1
Query:  604 SEIYDPAFLFYCNEHTYVIAENLQCYTRVLDPSDPVYLGNRFRREGERDQQGKALLNSGAAGFVLSRGSLSLLHQAWRGGEGGGRADSLGGSVDHSGGHSDGEREERGPPTECVAKSNYERGNPGITLARCLAHLGVYAKDTTGSQGGQRFNAYGPVRLAQGKIDQWYKDVHASDPGMWRAGPDCCSSDTISFHYVGPAEARAMHHILHH 1233
            + + D  F    ++ TYVIAENL+ +    DP+ P+ +G RF    E          SG AG+VLSRG+L L+ +    G                              + C      E     + +  C A +GV   D+    G + F+ + P  L      +    +   +    + G +CCS  ++SFHYV P +   + ++++H
Sbjct:  478 NSLNDYDFFMKADDDTYVIAENLRFFLSNQDPNIPILMGRRFNYSVE------GFFPSGGAGYVLSRGALKLIVEGILNGA-----------------------------SACAQSQAPE----DVQIGYCAAAVGVQWLDSLDEYGRETFHPFYPSHLLSKSAMESTPWIFGRNYHPLKMGFNCCSDQSVSFHYVEPMDMYTLEYLIYH 648          
BLAST of mRNA_Ecto-sp8_S_contig10669.1035.1 vs. uniprot
Match: A0A814P6Q7_9BILA (Hypothetical protein n=1 Tax=Adineta steineri TaxID=433720 RepID=A0A814P6Q7_9BILA)

HSP 1 Score: 69.7 bits (169), Expect = 1.480e-9
Identity = 54/197 (27.41%), Postives = 83/197 (42.13%), Query Frame = 1
Query:  640 NEHTYVIAENLQCYTRVLDPSDPVYLGNRFRREGERDQQGKALLNSGAAGFVLSRGSLSLLHQAWRGGEGGGRADSLGGSVDHSGGHSDGEREERGPPTECVAKSNYERGNPGITLARCLAHLGVYAKDTTGSQGGQRFNAYGPVRLAQGKIDQWYKDVHASDPGMWRAGPDCCSSDTISFHYVGPAEARAMHHILH 1230
            ++ TY+I ENL+ +    + S+PV  G  F+    +        +SG A +VLSR SL   ++A                      H D       P + C+     + GN  I +ARCL    VY   +   Q  + F+        +G    W K  +A +P   + G +CCS  TISFHY+ P +   M  +L+
Sbjct:  147 DDDTYLIVENLKAFLSQQNASEPVTFGYNFKVIVPKGY------HSGGASYVLSRESLRRFYEA----------------------HKD-------PTSTCLK----DGGNEDIEIARCLRTKDVYPGQSLDKQNRELFHTLSYTDHFRGNFPDWLKK-YAENP--LQTGDNCCSDQTISFHYIDPDKIYLMDFLLY 301          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig10669.1035.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L969_9PHAE4.870e-28493.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FS30_ECTSI1.310e-16373.13Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S1ZC17_9STRA2.240e-3333.87Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
F0YD67_AURAN6.020e-3136.21WW domain-containing protein n=1 Tax=Aureococcus a... [more]
A0A1Z5JKF7_FISSO2.710e-3032.98Uncharacterized protein n=2 Tax=Fistulifera solari... [more]
A0A7S4J8K6_9STRA1.390e-2632.02Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
K0TD75_THAOC2.240e-2128.85Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A7S1ZMV4_TRICV2.640e-1432.12Hypothetical protein (Fragment) n=1 Tax=Trieres ch... [more]
A0A158R8N6_TAEAS1.000e-924.29N-acetylgalactosaminide beta-1,3-galactosyltransfe... [more]
A0A814P6Q7_9BILA1.480e-927.41Hypothetical protein n=1 Tax=Adineta steineri TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig10669contigEcto-sp8_S_contig10669:401..5698 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score473.4
Seed ortholog evalue1.1e-130
Seed eggNOG ortholog2880.D7FS30
Model size1245
Hectar predicted targeting categorysignal peptide
Exons8
EggNOG free text desc.glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase activity
EggNOG OGsKOG2246@1,KOG2246@2759
Cds size1245
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig10669.1035.1prot_Ecto-sp8_S_contig10669.1035.1Ectocarpus species8 EcLAC_412polypeptideEcto-sp8_S_contig10669 401..5698 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681143162.9792402-CDS-Ecto-sp8_S_contig10669:400..5421681143162.9792402-CDS-Ecto-sp8_S_contig10669:400..542Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig10669 401..542 -
1681143162.9880629-CDS-Ecto-sp8_S_contig10669:858..9201681143162.9880629-CDS-Ecto-sp8_S_contig10669:858..920Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig10669 859..920 -
1681143162.9953105-CDS-Ecto-sp8_S_contig10669:1208..12731681143162.9953105-CDS-Ecto-sp8_S_contig10669:1208..1273Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig10669 1209..1273 -
1681143163.0030773-CDS-Ecto-sp8_S_contig10669:2427..26501681143163.0030773-CDS-Ecto-sp8_S_contig10669:2427..2650Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig10669 2428..2650 -
1681143163.012864-CDS-Ecto-sp8_S_contig10669:3205..33741681143163.012864-CDS-Ecto-sp8_S_contig10669:3205..3374Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig10669 3206..3374 -
1681143163.0201995-CDS-Ecto-sp8_S_contig10669:3925..40671681143163.0201995-CDS-Ecto-sp8_S_contig10669:3925..4067Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig10669 3926..4067 -
1681143163.0271647-CDS-Ecto-sp8_S_contig10669:4826..49271681143163.0271647-CDS-Ecto-sp8_S_contig10669:4826..4927Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig10669 4827..4927 -
1681143163.034109-CDS-Ecto-sp8_S_contig10669:5357..56981681143163.034109-CDS-Ecto-sp8_S_contig10669:5357..5698Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig10669 5358..5698 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp8_S_contig10669.1035.1

>prot_Ecto-sp8_S_contig10669.1035.1 ID=prot_Ecto-sp8_S_contig10669.1035.1|Name=mRNA_Ecto-sp8_S_contig10669.1035.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=415bp
MDKRVRWLWLSVSLCWMLYVLVVLCQRSASPASGGPVVSGKRTRSNSGET
AYHRNYNHGNTHPSSSQRGHRQGKTVVVVMPSPPMVSGPSTRIDRLQTIR
DTWGQDLMDAGENSVVFVMDETDAGTVEEALDTWGALETSPFPYPAGEDN
NSKGLPTRRHRTLEQQREQGSETPRVLVVPDDVTRGGTDGDGRLRYVLAR
ISEIYDPAFLFYCNEHTYVIAENLQCYTRVLDPSDPVYLGNRFRREGERD
QQGKALLNSGAAGFVLSRGSLSLLHQAWRGGEGGGRADSLGGSVDHSGGH
SDGEREERGPPTECVAKSNYERGNPGITLARCLAHLGVYAKDTTGSQGGQ
RFNAYGPVRLAQGKIDQWYKDVHASDPGMWRAGPDCCSSDTISFHYVGPA
EARAMHHILHHRET*
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mRNA from alignment at Ecto-sp8_S_contig10669:401..5698-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp8_S_contig10669.1035.1 ID=mRNA_Ecto-sp8_S_contig10669.1035.1|Name=mRNA_Ecto-sp8_S_contig10669.1035.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=5298bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10669:401..5698- (Ectocarpus species8 EcLAC_412)
ATGGACAAGCGGGTTCGATGGCTGTGGCTATCTGTAAGCCTCTGTTGGAT GCTGTATGTGCTTGTTGTGTTGTGCCAGCGATCAGCGTCTCCAGCGAGTG GTGGTCCCGTCGTCTCCGGAAAACGTACTAGAAGTAACAGCGGCGAGACC GCGTATCATCGGAACTATAACCATGGGAACACGCACCCCTCCTCAAGCCA GCGTGGGCATCGGCAAGGCAAGACCGTGGTGGTGGTTATGCCCAGTCCGC CCATGGTGTCTGGCCCCTCGACCAGGATAGATCGCTTGCAGACAATCCGA GATACCTGGGGGCAGGACCTGATGGATGCTGGCGAAAACAGGTGTGAGTT CCTTGGTTGTGCGTGTACAATACATGTAGTCTGTAGTGGACAGGTAGACT ACAGTAGATTACAATACATAGACTTAATGTTTCCCCTGCTGCTGTCTTCT TGCCTAATCTAACATTGTTTGCTTTCATATCTTGTCTTTTCTTGCCTTAT CTTGGCTTGTTCACAAGTACTCCGACGTATGTTCTATTCTGCCATGTCTG CTCTTGCACTGGCGTTTTGTTCTCCTTGTCTTCTGTGTTGCCTTGATTTG GCCTGTCCCAAGTTGGCTTGCCTTTCCTTGTCGTACCTGTATTATCGTAT CATACTTCGCATGGTCTCCTCTTGTCTTGCTTTATTTTCTGCTGCTGCTC CCACTGCCCCTGGTTGCTGTTGCTGCTGCTGCTGCTGCTGCTACCATGTC GCGCGCACTTGGTCGGGACAGCGTAGTGTTTGTCATGGACGAAACCGATG CAGGGACGGTGGAGGAGGCTTTGGACACTTGGGGTGCTCTGGAAACATCG CCCTTTCCTTATCCTGCCGGAGGTATTTAGTAAGGGTTACGCTTCGGGTT AGGAGGTCGCAGCTAAGTCAGGACCAGAGAAAGAACTCAGTAGGTGCAAG GTCCCTGGCATGTACCCCAAGATGTGTGGGTCCACGCCTACGGCATACTC GGGGGGCACAAACACATTGATAGTGACGGGGCGTCCACCAATGGGGACGA TCCTCGCCTCTCTTGACGGGGGGTACAGTAGCGCTCGACCCTCTCTCTCC GCGACTGTCACAGCAGATAGGCTACGGGCTGTGAGGCTGGGTGCGTCTGT CTCCGACACAGGGTTCCATGCCATACAGTACAAGACGCCCATACTCTCGT TTTTGTTGTCTCTCTTCCATCCGTTGGTGTTTCTGTCTCCCTCAGAGTCA CCCTCGCTCTAGCTCCCCCCTCGTAGATAGAAGCGGTGTGTATCCGAAAA AGAGGAGATGGGGCCGATGAGTGGATGCGGGACGTCTTTTGTTTGCTGTA CCTGCGAACTGCTGTCTAGCGTGTAAGGTGACCGAGAACTTGGTAATGAA ACGTAACCCGAGGGTGGGTGTTGTCCGAAACGCAAATGTGCTCCGTCTCG TAGAGGGAACAATGCGCGATCAATCACCAAACGACTCGGAGTCGTTGGGG CCCATTGGAACAAAGAAATGCAAGATTCCACCGGCGCAGCTAGGCGTTCG CAGTCAACGAACCAGAACGCTCCCGTCCCCCCCCTCCCCCGTTATCTACA TCTGTCGTCCCCCCCGCGAACAACACACTAGAGGACAACAACAGCAAGGG CCTTCCAACGCGGCGTCATCGAACACTAGAGCAACAGCGAGAGCAAGGTT CGGAGACTCCTCGAGTCCTTGTGGTCCCAGATGACGTCACGCGGGGCGGC ACCGACGGCGACGGGCGTCTTAGGTACGGAACAATCTACGGAACAATCTA CGGCGACGAGGAGTGAGTTCGAGGTCTAAATTTATGGCTTTTATTTTGGG AGCCCCTTACAGTCCATGCCGGCCTTGCCTTGGCGTACGAATCTGCGAAT TGGTTTACGAATCATTCTTGTACACGTTATGGCAGAAGTACCCAGCGAGT TTCATCACAACCTGAGAGTGAATCCACCCCCCCACCCCCCTACCCCCGCC GGATCGTGTGAGCCTACCTGTTTTCACGCACGCGCTTTCTGTACCACCAT CTGGCGGAAAGGGCCATGTATTCGTTTGCCACAAGATCCTCGAAGAATAT TATCCCATTTGACCAAGTAAGAACCTTCCAGGAAATACACTACTCTCCAC ACACACACCGCCACCTGTCTCTCCTGTGTGTCTCGCTTCTGAGTAGTTCT GAATGGTGTTCTGACCGTGATGGTAGTCTTTACAGTTGTCGTCGCCGTCG CCGGCGTTCTTTGTGGCTGCCTTCTGGCTGTCCTGTCTCAGTTCAAACGA CCCCCCCCCCCCCCCCCGGCCAAGGTACGTCTTAGCACGAATCTCCGAGA TCTACGACCCGGCCTTCCTCTTCTACTGCAACGAGCACACCTACGTCATC GCGGAGAATCTGCAGTGCTACACTAGGGTCCTGGATCCGTCCGACCCTGT GTATCTCGGGAATCGGTTCCGCAGGGAAGGCGAGAGAGACCAGGTGTGTG TGTGTGTGTGTGTGTTTGTGGGAACGGTTTCTTCGTACCATGTCGTGTGC GTTCCTTGTACTGGTATCGAGAACAGTCACAATACGGTGAGAAGGCGTAC ACGTCATAACGGGAACGAAGACTGAAAAACAAATCGATGCCGCATGGGCG AAAGGGGGGATTGTGTGTGTGTGTGCGTCTGGGAAAAACTCGTGGATGTT TGGAGGTGCAGGTGCTTGTGTCTGTTTGTGTAGAAATTGCGGGTTTGGCG ATATGGTTAAAGATGTGGATGTCTAGAGGTGCGGCTGGTGTTCGTGTTTG GGTAGGTTTGGGCTGAAATTGCGCTTTTGGCGATAAGGTCAAGGATGTGG CGCTGGGTTCCCAAAATACCTCTAACAATTGTACTGCCTTTGTTGACGAT TATTTTTGAAGCATGTCGAATTCTCTTAACCGTGCCATGATTTTCCCACG CCGCGGCGGCGGTCTGTGTCGCGCCCCCCGCCCCGCCTGCTGATTGGCTG ACGCAAAGCGCATGAATCGTTTTTTTGTTTTTCCTTGCACCGCGCGAGCA GGGAAAAGCCCTTCTCAACTCCGGTGCGGCGGGCTTCGTTCTCAGCAGAG GATCGCTCTCGTTGCTACACCAGGCGTGGCGTGGCGGTGAGGGCGGAGGG CGAGCGGATAGTCTTGGGGGCTCCGTGGATCACAGCGGGGGGCACAGTGA TGGGGAGAGAGAGGAGCGGGGGCCGCCGACTGAGTGCGTGGCCAAATCCA ACTACGAGCGGGGAAACCCGGGTGGGTGCACGGGTGGGAGCATTTTGATG CGATCGTGGGGGTGGATGTGACGGATGGTTAATTGCTCGCAGATCCGTGT GCGACAAGCAACACGCTGCACTTATCGCACACACGTGGCCAGCACTAACT TGTGTTGGATTGGCCTTTTTCAGCCGGAGCATCGTAGCGCATACGGCGCG GCAAAGACGTGTTCACACCACTTAATGGCATCGCCTAAACTTCTAAACTT GCTCGAAGCAAAGCCAGGGTTTCCTGTTCGCTTGACATAACACGATGCCA AGTGGTGTCCGAAACCTCCTGCAAGACAAGCGTGATGCTCGGATGCAAGC CAGTTCGGCACATGAGCAGATCGTGCGCTATCGTTGTCGCCAGGCTAGCC GGTATTGGCAGTCGCAGCACGCGGCACCACTTACTTCAAACAACCTGGGG GTCATGAACTTCAGCATTATTTAATGTTCGATCAAAATTTAAGAAAGGAC TTAGCCATGACAACAGGTTCGCGGTTGAACACCCAAGCTTTGCTTCCGTG GCTTGTAGCACTTGCTCTCCTGATGCTCGCTGTACTCCTGCCACAGTCAC ACGCCCGTCCCTCTCTTCCCTTTCTCCTTCATGCAAGAATCTGCGTGACT CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGCT CGCTCTCTCTCGCTCTCTCTCTCGCGGCGTAACCAACCAAGCCGCCTTGA TTCACGGGTTTACCATGAAGTATCTAGGCTGATTCTTGTTCCGGGATTGG GTTGGTTGAGTGTTCACGGGTGCCACGTTCGTACGTGCCCGTCTCGAGAT ATGCGCCTCTGTGCCCTCTTGCTCCGGATACAGTCAGCTGAGTTGCCACC CTGGCTCTTACGCTTTTCACACACCGAGACAGGCGTATGTTTTACTACTT ATCCGCCATGACTTGCGATTGTGCTTGTTGGTTGCTTGTTTCGCCGCATT TTTCCTTGGTTTCTCGCGTGGGTGTGCATGTGTGCATGTGTGCATGTGTG CATCACCTTGGCTCGGTGCTCGGAAGCGCCAAGTTCTATTGTTAATTATG TTTGGTGCTCTGTTTGGTTTTCTCCAGCTTAAGCGCACGGTAGTTAACAC GTCGTCTCCCGTTCATCCCATCCAGGCATCACCCTGGCTCGGTGCTTGGC ACACCTAGGGGTTTACGCGAAGGACACGACGGGCAGTCAGGTGGGTTTGT TGTGTTTGTTGTTGTTTTAGTATAGGCTGGCTGCTTCATCGTCGTCGTTG CTGCTTCATCGTCGTCATTGCTGCTGCTGCTGCTGCCGCTAGCTGTTGTC GTTGCTGCTGTGGTTTTTGCTGCTGCTGCTGCTGCTGCTCGAAATACAGT AGTATTGCGTGTATGAGAGCGCCGCAGTCCCGCAACGTTGCCCGGCCTTG CTGTGCAATTGCTGTCATGGTTGGCGAACACTGCTGCATGTTGCGACGTT ACGACACCGACCATTCCATTGCCATCAGGGAGGGCAGCGGTTCAACGCGT ACGGTCCAGTCCGTCTGGCGCAGGGGAAGATCGACCAGTGGTGGGTGCCT AACGTTGTCGTCCGTGTTGCCGCTGTTGCTATTGTTGTTGTTGTTGCTGC CTGCTGCTGCTGCTGTTTTGCTGCTGTGGGTGTTGCTTCTGTTGCTATTG CTGTGTTGTTGGTGTTGTTGGTTAAGATGACTGGTATTGTTGTTGCTATT GGTGTTGATGATGATGTTGTTAGTTGTTGCTGCCGCTTTTGCCGCATCGC CTTAAACGTCTGTACTGTGGCCTTCCCCCGCCAGACACGTTTAACCTCTG CGCTCGATAAACGACTACCGACTCTCGTCTCATACATACCATCATACCAC GATCAGGTATAAGGACGTTCACGCCTCGGATCCAGGGATGTGGCGAGCCG GCCCCGACTGCTGTTCTTCGGACACTATCTCCTTCCACTACGTTGGACCA GCGGAAGCCAGAGCGATGCACCACATCCTACACCACAGAGAGACGTGA
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Coding sequence (CDS) from alignment at Ecto-sp8_S_contig10669:401..5698-

>mRNA_Ecto-sp8_S_contig10669.1035.1 ID=mRNA_Ecto-sp8_S_contig10669.1035.1|Name=mRNA_Ecto-sp8_S_contig10669.1035.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=1245bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10669:401..5698- (Ectocarpus species8 EcLAC_412)
ATGGACAAGCGGGTTCGATGGCTGTGGCTATCTGTAAGCCTCTGTTGGAT
GCTGTATGTGCTTGTTGTGTTGTGCCAGCGATCAGCGTCTCCAGCGAGTG
GTGGTCCCGTCGTCTCCGGAAAACGTACTAGAAGTAACAGCGGCGAGACC
GCGTATCATCGGAACTATAACCATGGGAACACGCACCCCTCCTCAAGCCA
GCGTGGGCATCGGCAAGGCAAGACCGTGGTGGTGGTTATGCCCAGTCCGC
CCATGGTGTCTGGCCCCTCGACCAGGATAGATCGCTTGCAGACAATCCGA
GATACCTGGGGGCAGGACCTGATGGATGCTGGCGAAAACAGCGTAGTGTT
TGTCATGGACGAAACCGATGCAGGGACGGTGGAGGAGGCTTTGGACACTT
GGGGTGCTCTGGAAACATCGCCCTTTCCTTATCCTGCCGGAGAGGACAAC
AACAGCAAGGGCCTTCCAACGCGGCGTCATCGAACACTAGAGCAACAGCG
AGAGCAAGGTTCGGAGACTCCTCGAGTCCTTGTGGTCCCAGATGACGTCA
CGCGGGGCGGCACCGACGGCGACGGGCGTCTTAGGTACGTCTTAGCACGA
ATCTCCGAGATCTACGACCCGGCCTTCCTCTTCTACTGCAACGAGCACAC
CTACGTCATCGCGGAGAATCTGCAGTGCTACACTAGGGTCCTGGATCCGT
CCGACCCTGTGTATCTCGGGAATCGGTTCCGCAGGGAAGGCGAGAGAGAC
CAGCAGGGAAAAGCCCTTCTCAACTCCGGTGCGGCGGGCTTCGTTCTCAG
CAGAGGATCGCTCTCGTTGCTACACCAGGCGTGGCGTGGCGGTGAGGGCG
GAGGGCGAGCGGATAGTCTTGGGGGCTCCGTGGATCACAGCGGGGGGCAC
AGTGATGGGGAGAGAGAGGAGCGGGGGCCGCCGACTGAGTGCGTGGCCAA
ATCCAACTACGAGCGGGGAAACCCGGGCATCACCCTGGCTCGGTGCTTGG
CACACCTAGGGGTTTACGCGAAGGACACGACGGGCAGTCAGGGAGGGCAG
CGGTTCAACGCGTACGGTCCAGTCCGTCTGGCGCAGGGGAAGATCGACCA
GTGGTATAAGGACGTTCACGCCTCGGATCCAGGGATGTGGCGAGCCGGCC
CCGACTGCTGTTCTTCGGACACTATCTCCTTCCACTACGTTGGACCAGCG
GAAGCCAGAGCGATGCACCACATCCTACACCACAGAGAGACGTGA
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