mRNA_Ecto-sp8_S_contig10669.1035.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig10669.1035.1 vs. uniprot
Match: A0A6H5L969_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L969_9PHAE) HSP 1 Score: 781 bits (2018), Expect = 4.870e-284 Identity = 385/414 (93.00%), Postives = 395/414 (95.41%), Query Frame = 1
Query: 1 MDKRVRWLWLSVSLCWMLYVLVVLCQRSASPASGGPVVSGKRTRSNSGETAYHRNYNHGNTHPSSSQRGHRQGKTVVVVMPSPPMVSGPSTRIDRLQTIRDTWGQDLMDAGENSVVFVMDETDAGTVEEALDTWGALETSPFPYPAGEDNNSKGLPTRRHRTLEQQREQGSETPRVLVVPDDVTRGGTDGDGRLRYVLARISEIYDPAFLFYCNEHTYVIAENLQCYTRVLDPSDPVYLGNRFRREGERDQQGKALLNSGAAGFVLSRGSLSLLHQAWRGGEGGGRADSLGGSVDHSGGHSDGEREERGPPTECVAKSNYERGNPGITLARCLAHLGVYAKDTTGSQGGQRFNAYGPVRLAQGKIDQWYKDVHASDPGMWRAGPDCCSSDTISFHYVGPAEARAMHHILHHRET 1242
M KRVRWLWL VS+CWML VLVVLCQRSASPASGGPV+SGKRT SNSGETA+HRNY+HGNTHPSS QRGHRQ KTVVVVMPSPPMVSGPSTRIDR QTIRDTWGQDLMDAGENSVVFV+DE DAGTVEEAL TWGALETSPFPYP+GED NSKGLPTR HRTLEQQREQGSETPRVLVVPDDVTRGGTDGDGRLRYVLARISEIYDPAFLFYCNEHTYVIAENL CYTR LDPSDPVYLGNRFRRE ERDQ GKALLNSGAAGF+LSRGSLSLLHQAWR GEGGGRADSLGGSVDHSGGHSDG+ EERGPPTECVAKSNYERGNPGITLARCLAHL VYA DTTGSQGGQRFNAYGPVRLAQGKIDQWYKDVHASDPGMWRAGPDCCSSDTISFHYVGPAEARAMHHILHH++T
Sbjct: 1 MGKRVRWLWLCVSVCWMLCVLVVLCQRSASPASGGPVLSGKRTTSNSGETAHHRNYDHGNTHPSSRQRGHRQDKTVVVVMPSPPMVSGPSTRIDRFQTIRDTWGQDLMDAGENSVVFVVDEADAGTVEEALGTWGALETSPFPYPSGEDINSKGLPTRHHRTLEQQREQGSETPRVLVVPDDVTRGGTDGDGRLRYVLARISEIYDPAFLFYCNEHTYVIAENLLCYTRSLDPSDPVYLGNRFRRESERDQ-GKALLNSGAAGFILSRGSLSLLHQAWRDGEGGGRADSLGGSVDHSGGHSDGKGEERGPPTECVAKSNYERGNPGITLARCLAHLRVYAMDTTGSQGGQRFNAYGPVRLAQGKIDQWYKDVHASDPGMWRAGPDCCSSDTISFHYVGPAEARAMHHILHHKDT 413
BLAST of mRNA_Ecto-sp8_S_contig10669.1035.1 vs. uniprot
Match: D7FS30_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS30_ECTSI) HSP 1 Score: 470 bits (1210), Expect = 1.310e-163 Identity = 245/335 (73.13%), Postives = 248/335 (74.03%), Query Frame = 1
Query: 238 MPSPPMVSGPSTRIDRLQTIRDTWGQDLMDAGENSVVFVMDETDAGTVEEALDTWGALETSPFPYPAGEDNNSKGLPTRRHRTLEQQREQGSETPRVLVVPDDVTRGGTDGDGRLRYVLARISEIYDPAFLFYCNEHTYVIAENLQCYTRVLDPSDPVYLGNRFRREGERDQQGKALLNSGAAGFVLSRGSLSLLHQAWRGGEGGGRADSLGGSVDHSGGHSDGEREERGPPTECVAKSNYERGNPGITLARCLAHLGVYAKDTTGSQGGQRFNAYGPVRLAQGKIDQWYKDVHASDPGMWRAGPDCCSSDTISFHYVGPAEARAMHHILHHRET 1242
MPSPPMVSGPSTRIDRLQTIRDTWGQDLMDAGEN RYVLARI EIYDP FLFYCNEHTYVIAENLQCYTR LDPSDPVYLGNRFRREGE++Q GKALLNSGAAGFVLSRGSLSLLHQAWRGGEGGGRADSLGGSVDHSGGHSDGE EERGPPTECVAKSNYERGNPGITLARCLAHLGVYAKDTTG+QGGQRFNAYGPVRLAQGKIDQWY DVHASDPGMWRAGPDCCSSDTISFHYVGPAEARAMHHILHHRET
Sbjct: 1 MPSPPMVSGPSTRIDRLQTIRDTWGQDLMDAGEN---------------------------------------------------------------------------------RYVLARIYEIYDPDFLFYCNEHTYVIAENLQCYTRSLDPSDPVYLGNRFRREGEKNQ-GKALLNSGAAGFVLSRGSLSLLHQAWRGGEGGGRADSLGGSVDHSGGHSDGEGEERGPPTECVAKSNYERGNPGITLARCLAHLGVYAKDTTGNQGGQRFNAYGPVRLAQGKIDQWYNDVHASDPGMWRAGPDCCSSDTISFHYVGPAEARAMHHILHHRET 253
BLAST of mRNA_Ecto-sp8_S_contig10669.1035.1 vs. uniprot
Match: A0A7S1ZC17_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZC17_9STRA) HSP 1 Score: 136 bits (342), Expect = 2.240e-33 Identity = 84/248 (33.87%), Postives = 126/248 (50.81%), Query Frame = 1
Query: 520 PRVLVVPDDVTRGGTDGDGRLRYVLARISEIYDPAFLFYCNEHTYVIAENLQCYTRVLDPSDPVYLGNRFRREGERDQQGKALLNSGAAGFVLSRGSLSLLHQAWRGGEGGGRADSLGGSVDHSGGHSDGEREERGPPTECVAKSN--YERGNPGITLARCLAH-LGVYAKDTTGSQGGQRFNAYGPVRLAQGKIDQWYKDVHASDPGMW----------RAGPDCCSSDTISFHYVGPAEARAMHHI 1224
PR+L++P +T G RL+YV+ ISE+ DP F F+ N+HT+VI E+L Y +P + +Y G+ + G NSGAAG++LSR ++ L + W E+ P EC A++ + +GNPG+ ARCL+H L V A DT G RF+A+G VR+ GK+D WY H + G+ ++G CC+ T+SFHYV +E R++ +
Sbjct: 11 PRLLLIPSFITE--EKGVERLQYVIKTISEVIDPDFAFFVNDHTFVIPEHLCDYLIGSNPDEDIYAGHAMKDRGN-----DFAFNSGAAGYILSRVTMKRLGKKWS---------------------------EKDP--ECTAENAPAFIQGNPGLVTARCLSHILHVSALDTRDEYGRHRFHAFGLVRVIAGKVDDWYNKKHETLDGVLGVDNVHHHKLQSGTLCCAPRTVSFHYVEGSETRSLFEV 222
BLAST of mRNA_Ecto-sp8_S_contig10669.1035.1 vs. uniprot
Match: F0YD67_AURAN (WW domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YD67_AURAN) HSP 1 Score: 136 bits (342), Expect = 6.020e-31 Identity = 88/243 (36.21%), Postives = 123/243 (50.62%), Query Frame = 1
Query: 520 PRVLVVPDDVTRGGTDGDGRLRYVLARISEIYDPAFLFYCNEHTYVIAENLQCYTRVLDPSDPVYLGNRF-RREGERDQQGKALLNSGAAGFVLSRGSLSLLHQAWRGGEGGGRADSLGGSVDHSGGHSDGEREERGPPTECVAKSNYERGNPGITLARCLAHLGVYAKDTTGSQGGQRFNAYGPVRLAQGKIDQWYKDVHA----SDPGMWR--AGPDCCSSDTISFHYVGPAEARAMHHIL 1227
P+ L+VP +T G RL +VL R+S F F N+HT ++A NL C+ R LDP+ +Y G+ +R G++ + + NSGA+G+VL+R +L LL AW + P A S + +GNPG+ LARCLA GV DT + G F+A+GPVR + G +D WY+ +H SDP +G CC T+SFHYV AE A+H L
Sbjct: 981 PKNLLVPATIT--DAMGTARLEWVLRRVSAA-GVDFAFMANDHTAILAPNLACFLRRLDPAAALYAGHALAQRNGKQPPE---VFNSGASGYVLTRATLDLLEAAWAAED---------------------------PTCSAAAASKWLQGNPGLVLARCLASRGVTPVDTRVA-GRHVFHAFGPVRTSTGGVDDWYRRMHEMLEFSDPPAHPLPSGAACCDGHTVSFHYVEAAEQVALHAAL 1189
BLAST of mRNA_Ecto-sp8_S_contig10669.1035.1 vs. uniprot
Match: A0A1Z5JKF7_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JKF7_FISSO) HSP 1 Score: 131 bits (329), Expect = 2.710e-30 Identity = 94/285 (32.98%), Postives = 136/285 (47.72%), Query Frame = 1
Query: 397 TWGALETSPFPYPAGEDNNSKGLPTRRHRTLEQQREQGSET---PRVLVVPDDVTRGGTDGDGRLRYVLARISEIYDPAFLFYCNEHTYVIAENLQCYTRVLDPSDPVYLGNRFRREGERDQQGKALLNSGAAGFVLSRGSLSLLHQAWRGGEGGGRADSLGGSVDHSGGHSDGEREERGPPTECVAKSNYERGNPGITLARCLAHLGVYAKDTTGSQGGQRFNAYGPVRLAQGKIDQWYKDVHAS---------DPGMWRAGPDCCSSDTISFHYVGPAEARAM 1215
TWG + F +N P H T +++E S+T P+ L++PD + G DG RL Y + I E DP F F+ N+HT+VI E+L Y L+ D +Y G+ R G+ D + NSGAAG++LSRG++ L Q W +H+ ++ GP S + +GNPG+ A+CL +G++A DT RF+A+ R+ GK+D WY H G G DCCS +T+SFHYV E A+
Sbjct: 131 TWGPYARAIFVL-----HNQTEFPQGSHLTFSEEKEP-SDTFSYPQTLLLPDMI--GVDDGLPRLFYTIRAIHERVDPDFCFFVNDHTFVIPEHLCTYLDGLNAEDDLYAGHALRN-GKED-----VFNSGAAGYLLSRGTMKKLMQKWD---------------EHA------DKCWVGPDA-----SAWLQGNPGLVTAQCLESIGIHAIDTREHNKWHRFHAFPLTRVVAGKVDGWYNKKHEGMEAFRGFDKSYGELLKGEDCCSKETVSFHYVEYLECMAL 375
BLAST of mRNA_Ecto-sp8_S_contig10669.1035.1 vs. uniprot
Match: A0A7S4J8K6_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J8K6_9STRA) HSP 1 Score: 121 bits (304), Expect = 1.390e-26 Identity = 81/253 (32.02%), Postives = 124/253 (49.01%), Query Frame = 1
Query: 508 GSETPRVLVVPDDVTRGGTDGDGRLRYVLARISEIYDPAFLFYCNEHTYVIAENLQCYTRVLDPSDPVYLGNRFRREGERDQQGKALLNSGAAGFVLSRGSLSLLHQAWRGGEGGGRADSLGGSVDHSGGHSDGEREERGPPTECVAK--SNYERGNPGITLARCLAH-LGVYAKDTTGSQGGQRFNAYGPVRLAQGKIDQWYKDVHAS-----------DPGMWRAGPDCCSSDTISFHYVGPAEARAMHHI 1224
GS P++LV+P+ + G RL++ + I + +P F F+ N+HT+V+ E+L + DP+ +Y G+ + E E G A NSGAAG+VLS+ ++ L + W +E+ P +C+A+ + + + NPG+ A+CL + V A DT G RF+A+G VR A G +D+WY H M G DCCS DT+SFHYV AE + H +
Sbjct: 221 GSHYPQLLVLPESIKE--ESGVLRLQHTVRTIHDAINPDFAFFVNDHTFVMPEHLCLFLSGRDPTRELYAGHAMKNEKE----GYAF-NSGAAGYVLSKRTMGDLVKKW---------------------------DEKDP--KCLAEHAAKWLQSNPGLVTAKCLRESMHVNAVDTRDEGGRHRFHAFGLVRTAMGSVDEWYLKKHKGLDVIFGPDRHHHQHMPLKGVDCCSVDTVSFHYVEHAETKVFHAV 437
BLAST of mRNA_Ecto-sp8_S_contig10669.1035.1 vs. uniprot
Match: K0TD75_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TD75_THAOC) HSP 1 Score: 104 bits (260), Expect = 2.240e-21 Identity = 103/357 (28.85%), Postives = 147/357 (41.18%), Query Frame = 1
Query: 175 GNTHPSSSQRGHRQGKT-VVVVMPSPPMVSGPSTRIDRLQTIRDTWGQDLMDAGENSVVFVMDETDAGTVEEALDTWGALETSPFPYPAGEDNNSKGLPTRRHRTLEQQREQGSETPRVLVVPDDVTRGGTDGDGRLRYVLARISEIYDPAFLFYCNEHTYVIAENLQCYTRVLDPSDPVYLGNRFRREGERDQQGKALLNSGAAGFVLSRGSLSLLHQAWRGGEGGGRADSLGGSVDHSGGHSDGEREERGPPTECVAK--SNYERGNPGITLARCLAH-LGVYAKDTT-GSQGGQRFNAYGPVRLAQGKIDQWYKDVHASDPGMW----------RAGPDCCSSDTISFHYVGPA 1200
G T P++ +G + V VV+PS V P R RL+ I TWG E VFV+ E +P G + +S L RT P+VL +P D+ G RL Y + +SE +P+F+F+ N+HT+V+ +L + + D S Y+G+ + +G NSGAAG+VLSR + L RE P +EC S + +GNPGI A C + L V +DT G ++AYG VR K+DQWY + HA G+ + G CCS +T+S V A
Sbjct: 68 GMTSPAAKTEPSTRGPSFVTVVLPS---VVKPEARPLRLKNIEKTWGP------EARAVFVVHEN-------------------IEFPQGAEIDSGSL----SRTF----------PQVLKLPSDIKVD--QGVERLLYSIRTVSETVNPSFIFFTNDHTFVLPNHLCRFLQKRDASKDAYVGHALKGKGT-----PVAFNSGAAGYVLSRQTYMRLI-----------------------------REMDDPKSECSPSNASKWLQGNPGILTATCFSKVLNVQVEDTRDGEDLSHVYHAYGLVRTVSAKVDQWYVNNHAPLDGILGVDAKYHHRLQQGEACCSENTVSEQLVALA 346
BLAST of mRNA_Ecto-sp8_S_contig10669.1035.1 vs. uniprot
Match: A0A7S1ZMV4_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZMV4_TRICV) HSP 1 Score: 80.9 bits (198), Expect = 2.640e-14 Identity = 53/165 (32.12%), Postives = 76/165 (46.06%), Query Frame = 1
Query: 772 NSGAAGFVLSRGSLSLLHQAWRGGEGGGRADSLGGSVDHSGGHSDGEREERGPPTECVAKS--NYERGNPGITLARCLAH-LGVYAKDTTGSQGGQRFNAYGPVRLAQGKIDQWYKDVHA-----------SDPGMWRAGPDCCSSDTISFHYVGPAEARAMHHI 1224
NSGAAG+VLSR ++S L + W G+ C+A++ + +GNPG+ A+CL + V A DT G F+A+G VR GK+D+WY + H M G +CCSS T+SFHYV E A++ +
Sbjct: 2 NSGAAGYVLSRRTMSDLVRKWDEGD-----------------------------ARCLAENAPKWLQGNPGLVTAKCLRESMHVNAVDTRAEGGRHVFHAFGLVRTVSGKVDEWYLNKHRHLVAVFGPDGLGHQHMPLKGVECCSSKTVSFHYVETLETLALYEV 137
BLAST of mRNA_Ecto-sp8_S_contig10669.1035.1 vs. uniprot
Match: A0A158R8N6_TAEAS (N-acetylgalactosaminide beta-1,3-galactosyltransferase n=1 Tax=Taenia asiatica TaxID=60517 RepID=A0A158R8N6_TAEAS) HSP 1 Score: 71.6 bits (174), Expect = 1.000e-9 Identity = 51/210 (24.29%), Postives = 85/210 (40.48%), Query Frame = 1
Query: 604 SEIYDPAFLFYCNEHTYVIAENLQCYTRVLDPSDPVYLGNRFRREGERDQQGKALLNSGAAGFVLSRGSLSLLHQAWRGGEGGGRADSLGGSVDHSGGHSDGEREERGPPTECVAKSNYERGNPGITLARCLAHLGVYAKDTTGSQGGQRFNAYGPVRLAQGKIDQWYKDVHASDPGMWRAGPDCCSSDTISFHYVGPAEARAMHHILHH 1233
+ + D F ++ TYVIAENL+ + DP+ P+ +G RF E SG AG+VLSRG+L L+ + G + C E + + C A +GV D+ G + F+ + P L + + + + G +CCS ++SFHYV P + + ++++H
Sbjct: 478 NSLNDYDFFMKADDDTYVIAENLRFFLSNQDPNIPILMGRRFNYSVE------GFFPSGGAGYVLSRGALKLIVEGILNGA-----------------------------SACAQSQAPE----DVQIGYCAAAVGVQWLDSLDEYGRETFHPFYPSHLLSKSAMESTPWIFGRNYHPLKMGFNCCSDQSVSFHYVEPMDMYTLEYLIYH 648
BLAST of mRNA_Ecto-sp8_S_contig10669.1035.1 vs. uniprot
Match: A0A814P6Q7_9BILA (Hypothetical protein n=1 Tax=Adineta steineri TaxID=433720 RepID=A0A814P6Q7_9BILA) HSP 1 Score: 69.7 bits (169), Expect = 1.480e-9 Identity = 54/197 (27.41%), Postives = 83/197 (42.13%), Query Frame = 1
Query: 640 NEHTYVIAENLQCYTRVLDPSDPVYLGNRFRREGERDQQGKALLNSGAAGFVLSRGSLSLLHQAWRGGEGGGRADSLGGSVDHSGGHSDGEREERGPPTECVAKSNYERGNPGITLARCLAHLGVYAKDTTGSQGGQRFNAYGPVRLAQGKIDQWYKDVHASDPGMWRAGPDCCSSDTISFHYVGPAEARAMHHILH 1230
++ TY+I ENL+ + + S+PV G F+ + +SG A +VLSR SL ++A H D P + C+ + GN I +ARCL VY + Q + F+ +G W K +A +P + G +CCS TISFHY+ P + M +L+
Sbjct: 147 DDDTYLIVENLKAFLSQQNASEPVTFGYNFKVIVPKGY------HSGGASYVLSRESLRRFYEA----------------------HKD-------PTSTCLK----DGGNEDIEIARCLRTKDVYPGQSLDKQNRELFHTLSYTDHFRGNFPDWLKK-YAENP--LQTGDNCCSDQTISFHYIDPDKIYLMDFLLY 301 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig10669.1035.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig10669.1035.1 >prot_Ecto-sp8_S_contig10669.1035.1 ID=prot_Ecto-sp8_S_contig10669.1035.1|Name=mRNA_Ecto-sp8_S_contig10669.1035.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=415bp MDKRVRWLWLSVSLCWMLYVLVVLCQRSASPASGGPVVSGKRTRSNSGETback to top mRNA from alignment at Ecto-sp8_S_contig10669:401..5698- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig10669.1035.1 ID=mRNA_Ecto-sp8_S_contig10669.1035.1|Name=mRNA_Ecto-sp8_S_contig10669.1035.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=5298bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10669:401..5698- (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig10669:401..5698- >mRNA_Ecto-sp8_S_contig10669.1035.1 ID=mRNA_Ecto-sp8_S_contig10669.1035.1|Name=mRNA_Ecto-sp8_S_contig10669.1035.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=1245bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10669:401..5698- (Ectocarpus species8 EcLAC_412)back to top |