mRNA_Ecto-sp8_S_contig10663.1029.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig10663.1029.1 vs. uniprot
Match: D7FQG4_ECTSI (Cilia- and flagella-associated protein 52 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQG4_ECTSI) HSP 1 Score: 226 bits (575), Expect = 3.920e-68 Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 2
Query: 20 MAGVGSDATELKLHSCIGFTGKVLGGMKLTPCGGYMVYPLGSILVVRSMTGKNKQAFLEGHTSEISCVAMSSDGTRIVSGQANHMGVKADLCVWDLIQAQANCDAEKPSG 349
MAGVGSDATELKLHSCIGFTGKVLGGMKLTPCGGYMVYPLGSILVVRSMTGKNKQAFLEGHTSEISCVAMSSDGTRIVSGQANHMGVKADLCVWDLIQAQANCDAEKPSG
Sbjct: 1 MAGVGSDATELKLHSCIGFTGKVLGGMKLTPCGGYMVYPLGSILVVRSMTGKNKQAFLEGHTSEISCVAMSSDGTRIVSGQANHMGVKADLCVWDLIQAQANCDAEKPSG 110
BLAST of mRNA_Ecto-sp8_S_contig10663.1029.1 vs. uniprot
Match: A0A835Z6M8_9STRA (Cilia- and flagella-associated protein 52 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6M8_9STRA) HSP 1 Score: 145 bits (366), Expect = 2.220e-38 Identity = 65/104 (62.50%), Postives = 82/104 (78.85%), Query Frame = 2
Query: 38 DATELKLHSCIGFTGKVLGGMKLTPCGGYMVYPLGSILVVRSMTGKNKQAFLEGHTSEISCVAMSSDGTRIVSGQANHMGVKADLCVWDLIQAQANCDAEKPSG 349
DA EL L +CIGF+G VLGG+K+TPCG Y VYPLG +++VRS+TG K AFLEGHT++I CVAMS DG R+ +GQ NH GVKAD+C+WD+ +A NCD+ P G
Sbjct: 6 DAPELNLEACIGFSGHVLGGLKVTPCGNYTVYPLGKMMIVRSLTG-GKTAFLEGHTNDICCVAMSPDGKRLATGQVNHPGVKADVCIWDMSRAVRNCDSHDPHG 108
BLAST of mRNA_Ecto-sp8_S_contig10663.1029.1 vs. uniprot
Match: A0A6V1NYK3_HETAK (Cilia- and flagella-associated protein 52 n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NYK3_HETAK) HSP 1 Score: 126 bits (317), Expect = 1.440e-31 Identity = 60/106 (56.60%), Postives = 82/106 (77.36%), Query Frame = 2
Query: 29 VGSDATELKLHSCIGFTGKVLGGMKLTPCGGYMVYPLGSILVVRSMTGKNKQAFLEGHTSEISCVAMSSDGTRIVSGQANHMGVKADLCVWDLIQAQANCDAEKPS 346
+ +ATEL+L+S IGF+G+V G+K PCG Y+VYPLGSI+V+R + +NKQ+FLEGHT ++C+A+S DGTR+ SGQ +H GVKAD+ VWDL +A+ NC PS
Sbjct: 3 IAENATELQLNSVIGFSGEVPDGLKYLPCGEYIVYPLGSIIVLRHLQ-ENKQSFLEGHTQGVTCLAVSHDGTRLASGQTHHSGVKADVIVWDLEKAKENCRNGTPS 107
BLAST of mRNA_Ecto-sp8_S_contig10663.1029.1 vs. uniprot
Match: A0A7S3H4V8_9STRA (Cilia- and flagella-associated protein 52 (Fragment) n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H4V8_9STRA) HSP 1 Score: 114 bits (284), Expect = 4.140e-27 Identity = 55/96 (57.29%), Postives = 72/96 (75.00%), Query Frame = 2
Query: 47 ELKLHSCIGFTGKVLGGMKLTPCGGYMVYPLGSILVVRSMTGKNKQAFLEGHTSEISCVAMSSDGTRIVSGQANHMGVKADLCVWDLIQAQANCDA 334
ELK+ S IGF GKV + TPCG Y+VYPLGS +V+++M + K+AF +GHTSEISCV +S+DG R+ SGQ N MGVKAD+ +WDL QA+ D+
Sbjct: 4 ELKIKSVIGFNGKVNNALVYTPCGKYIVYPLGSFVVLKNMVTE-KEAFFDGHTSEISCVTVSADGNRLASGQINLMGVKADVIIWDLAQAKKLLDS 98
BLAST of mRNA_Ecto-sp8_S_contig10663.1029.1 vs. uniprot
Match: A0A7S0SIC7_9CHLO (Hypothetical protein n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0SIC7_9CHLO) HSP 1 Score: 95.9 bits (237), Expect = 3.260e-22 Identity = 45/91 (49.45%), Postives = 63/91 (69.23%), Query Frame = 2
Query: 35 SDATELKLHSCIGFTGKVLGGMKLTPCGGYMVYPLGSILVVRSMTGKNKQAFLEGHTSEISCVAMSSDGTRIVSGQANHMGVKADLCVWDL 307
S A+ L L S IGF GKV GG+ L P G M+YPLG+ +V++ + Q+FL+GHT E+SC+ +S+DG + SGQ ++MG AD+ VWDL
Sbjct: 2 STASPLPLESVIGFEGKVHGGLVLHPNGKTMLYPLGATIVIKELGDAFSQSFLQGHTDEVSCLTLSTDGRYLASGQISYMGFTADIIVWDL 92
BLAST of mRNA_Ecto-sp8_S_contig10663.1029.1 vs. uniprot
Match: A0A7S0SH92_9CHLO (Cilia- and flagella-associated protein 52 n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0SH92_9CHLO) HSP 1 Score: 95.9 bits (237), Expect = 1.060e-20 Identity = 45/91 (49.45%), Postives = 63/91 (69.23%), Query Frame = 2
Query: 35 SDATELKLHSCIGFTGKVLGGMKLTPCGGYMVYPLGSILVVRSMTGKNKQAFLEGHTSEISCVAMSSDGTRIVSGQANHMGVKADLCVWDL 307
S A+ L L S IGF GKV GG+ L P G M+YPLG+ +V++ + Q+FL+GHT E+SC+ +S+DG + SGQ ++MG AD+ VWDL
Sbjct: 2 STASPLPLESVIGFEGKVHGGLVLHPNGKTMLYPLGATIVIKELGDAFSQSFLQGHTDEVSCLTLSTDGRYLASGQISYMGFTADIIVWDL 92
BLAST of mRNA_Ecto-sp8_S_contig10663.1029.1 vs. uniprot
Match: A0A3B3RVS2_9TELE (Cilia- and flagella-associated protein 52 n=2 Tax=Paramormyrops kingsleyae TaxID=1676925 RepID=A0A3B3RVS2_9TELE) HSP 1 Score: 92.0 bits (227), Expect = 2.400e-19 Identity = 43/98 (43.88%), Postives = 64/98 (65.31%), Query Frame = 2
Query: 20 MAGVGSDATELKLHSCIGFTGKVLGGMKLTPCGGYMVYPLGSILVVRSMTGKNKQAFLEGHTSEISCVAMSSDGTRIVSGQANHMGVKADLCVWDLIQ 313
M+G + +L+L + IGF G V G+++ P +++YPLGS ++++S+T KQ FL GHT+ ISCVA+S G I SGQ MG +AD+ +WD Q
Sbjct: 6 MSGDAQEVPQLELQAVIGFNGHVFSGLRVHPNREHLIYPLGSTVILKSLTN-GKQQFLHGHTNNISCVAVSKSGRYIASGQVTFMGFRADIIIWDFPQ 102
BLAST of mRNA_Ecto-sp8_S_contig10663.1029.1 vs. uniprot
Match: A0A8B7XK75_ACAPL (Cilia- and flagella-associated protein 52 n=1 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7XK75_ACAPL) HSP 1 Score: 91.7 bits (226), Expect = 3.270e-19 Identity = 43/100 (43.00%), Postives = 65/100 (65.00%), Query Frame = 2
Query: 38 DATELKLHSCIGFTGKVLGGMKLTPCGGYMVYPLGSILVVRSMTGKNKQAFLEGHTSEISCVAMSSDGTRIVSGQANHMGVKADLCVWDLIQAQANCDAE 337
D EL+L S GF G V G+K+ P +++YPLG+ +++ +T K+ Q FL+GHT ++SCVA+S DG I SGQ +MG KA++ +WD + + C E
Sbjct: 7 DYKELELLSTTGFNGNVYAGLKVHPDKEHIIYPLGNTVIIEHIT-KHTQNFLQGHTDDVSCVAISKDGKYIASGQVTYMGFKANIIIWDFNEKELYCRLE 105
BLAST of mRNA_Ecto-sp8_S_contig10663.1029.1 vs. uniprot
Match: UPI001EEA8DEA (cilia- and flagella-associated protein 52 n=1 Tax=Silurus meridionalis TaxID=175797 RepID=UPI001EEA8DEA) HSP 1 Score: 90.1 bits (222), Expect = 1.130e-18 Identity = 40/87 (45.98%), Postives = 61/87 (70.11%), Query Frame = 2
Query: 47 ELKLHSCIGFTGKVLGGMKLTPCGGYMVYPLGSILVVRSMTGKNKQAFLEGHTSEISCVAMSSDGTRIVSGQANHMGVKADLCVWDL 307
+L+L S IGF G V+ G+++ P +++YPLG L+++++ KQ FL+GHT+ ISCVA+S GT + SGQ +MG KAD+ +WD
Sbjct: 7 KLQLESVIGFNGHVISGLQVHPDQEHLIYPLGCTLIIKNLRD-GKQGFLQGHTNNISCVALSKSGTYLASGQVTYMGFKADVIIWDF 92
BLAST of mRNA_Ecto-sp8_S_contig10663.1029.1 vs. uniprot
Match: A0A6J2W4T0_CHACN (Cilia- and flagella-associated protein 52 n=1 Tax=Chanos chanos TaxID=29144 RepID=A0A6J2W4T0_CHACN) HSP 1 Score: 89.7 bits (221), Expect = 1.550e-18 Identity = 40/100 (40.00%), Postives = 64/100 (64.00%), Query Frame = 2
Query: 20 MAGVGSDATELKLHSCIGFTGKVLGGMKLTPCGGYMVYPLGSILVVRSMTGKNKQAFLEGHTSEISCVAMSSDGTRIVSGQANHMGVKADLCVWDLIQAQ 319
M+G + +L+L + IGF G V G+++ P Y++YPLG ++++S+ KQAFL GHT+ +SC+ +S G I SGQ +MG KAD+ +WD + +
Sbjct: 1 MSGETPEVPQLELEAVIGFNGHVFSGLRVHPDREYLIYPLGCTVILKSLKN-GKQAFLHGHTNNVSCITVSKSGRYIASGQVTYMGFKADVIIWDYAKRE 99 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig10663.1029.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig10663.1029.1 >prot_Ecto-sp8_S_contig10663.1029.1 ID=prot_Ecto-sp8_S_contig10663.1029.1|Name=mRNA_Ecto-sp8_S_contig10663.1029.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=110bp MAGVGSDATELKLHSCIGFTGKVLGGMKLTPCGGYMVYPLGSILVVRSMTback to top mRNA from alignment at Ecto-sp8_S_contig10663:4634..6662+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig10663.1029.1 ID=mRNA_Ecto-sp8_S_contig10663.1029.1|Name=mRNA_Ecto-sp8_S_contig10663.1029.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=2029bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10663:4634..6662+ (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig10663:4634..6662+ >mRNA_Ecto-sp8_S_contig10663.1029.1 ID=mRNA_Ecto-sp8_S_contig10663.1029.1|Name=mRNA_Ecto-sp8_S_contig10663.1029.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=330bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10663:4634..6662+ (Ectocarpus species8 EcLAC_412)back to top |