mRNA_Ecto-sp8_S_contig10651.1014.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig10651.1014.1 vs. uniprot
Match: D8LP58_ECTSI (Helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP58_ECTSI) HSP 1 Score: 144 bits (362), Expect = 8.990e-39 Identity = 66/69 (95.65%), Postives = 69/69 (100.00%), Query Frame = 1
Query: 1 MDLLIISKAGSVGLDLQCTSKVFMFDLWWNVPQMNQVIGRAIRFKSHHEPCEHKHVDVYIYQSVFVTKQ 207
MDLLIISKAGSVGLDLQCTSKVFMFDLWWN+PQMNQVIGRAIRFKSHHEPC+HKHVDVY+YQSVFVTKQ
Sbjct: 498 MDLLIISKAGSVGLDLQCTSKVFMFDLWWNIPQMNQVIGRAIRFKSHHEPCKHKHVDVYVYQSVFVTKQ 566
BLAST of mRNA_Ecto-sp8_S_contig10651.1014.1 vs. uniprot
Match: Q8QNN8_ESV1K (EsV-1-23 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QNN8_ESV1K) HSP 1 Score: 144 bits (362), Expect = 9.200e-39 Identity = 66/69 (95.65%), Postives = 69/69 (100.00%), Query Frame = 1
Query: 1 MDLLIISKAGSVGLDLQCTSKVFMFDLWWNVPQMNQVIGRAIRFKSHHEPCEHKHVDVYIYQSVFVTKQ 207
MDLLIISKAGSVGLDLQCTSKVFMFDLWWN+PQMNQVIGRAIRFKSHHEPC+HKHVDVY+YQSVFVTKQ
Sbjct: 501 MDLLIISKAGSVGLDLQCTSKVFMFDLWWNIPQMNQVIGRAIRFKSHHEPCKHKHVDVYVYQSVFVTKQ 569
BLAST of mRNA_Ecto-sp8_S_contig10651.1014.1 vs. uniprot
Match: A0A6C0F7I3_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0F7I3_9ZZZZ) HSP 1 Score: 63.5 bits (153), Expect = 3.960e-10 Identity = 31/65 (47.69%), Postives = 48/65 (73.85%), Query Frame = 1
Query: 4 DLLIISKAGSVGLDLQCTSKVFMFDLWWNVPQMNQVIGRAIRFKSHHE-PCEHKHVDVYIYQSVF 195
D+L +S++GS GLDL+ T +V + + +WN Q++QVIGRA+R+KSH P K+VD+Y + SV+
Sbjct: 372 DVLCLSRSGSEGLDLKRTREVHIMEPFWNNSQLDQVIGRAVRYKSHENMPNNEKNVDIYHWYSVY 436
BLAST of mRNA_Ecto-sp8_S_contig10651.1014.1 vs. uniprot
Match: A0A6N1NTM0_9VIRU (Putative ATP-dependent RNA helicase n=2 Tax=Tupanvirus TaxID=2094720 RepID=A0A6N1NTM0_9VIRU) HSP 1 Score: 62.8 bits (151), Expect = 7.410e-10 Identity = 31/64 (48.44%), Postives = 45/64 (70.31%), Query Frame = 1
Query: 7 LLIISKAGSVGLDLQCTSKVFMFDLWWNVPQMNQVIGRAIRFKSHHE-PCEHKHVDVYIYQSVF 195
+L+IS AGS LDL+ T ++ + + WN ++ QVIGRAIR+KSH P E +HVD+Y + S+F
Sbjct: 337 VLLISSAGSESLDLKNTRQIHIMEPHWNESRIQQVIGRAIRYKSHENLPLEQRHVDIYRWVSIF 400
BLAST of mRNA_Ecto-sp8_S_contig10651.1014.1 vs. uniprot
Match: A0A2L2DMT7_MIMIV (ATP-dependent RNA helicase n=8 Tax=Mimiviridae TaxID=549779 RepID=A0A2L2DMT7_MIMIV) HSP 1 Score: 59.3 bits (142), Expect = 1.230e-8 Identity = 30/64 (46.88%), Postives = 45/64 (70.31%), Query Frame = 1
Query: 7 LLIISKAGSVGLDLQCTSKVFMFDLWWNVPQMNQVIGRAIRFKSHHE-PCEHKHVDVYIYQSVF 195
+L+IS AGS LDL+ T ++ + + WN ++ QVIGRAIR+KSH + P ++VD+Y + SVF
Sbjct: 337 VLLISSAGSESLDLKNTRQIHIMEPHWNESKITQVIGRAIRYKSHEKLPVNERNVDIYRWASVF 400
BLAST of mRNA_Ecto-sp8_S_contig10651.1014.1 vs. uniprot
Match: A0A2E5YWR4_9EURY (Helicase ATP-binding domain-containing protein n=1 Tax=Euryarchaeota archaeon TaxID=2026739 RepID=A0A2E5YWR4_9EURY) HSP 1 Score: 58.9 bits (141), Expect = 1.700e-8 Identity = 31/65 (47.69%), Postives = 46/65 (70.77%), Query Frame = 1
Query: 1 MDLLIISKAGSVGLDLQCTSKVFMFDLWWNVPQMNQVIGRAIRFKSHHE-PCEHKHVDVYIYQSV 192
+++L+IS A GLDL+ T+ V + + WN +++QVIGRAIRFKSHH P ++V+VY + SV
Sbjct: 394 VEVLLISGAAGFGLDLKRTASVHICEPNWNKAKIDQVIGRAIRFKSHHSLPVSERYVNVYYWLSV 458
BLAST of mRNA_Ecto-sp8_S_contig10651.1014.1 vs. uniprot
Match: A0A481YS24_9VIRU (DEAD/SNF2-like helicase n=1 Tax=Marseillevirus LCMAC101 TaxID=2506602 RepID=A0A481YS24_9VIRU) HSP 1 Score: 57.8 bits (138), Expect = 4.410e-8 Identity = 31/59 (52.54%), Postives = 40/59 (67.80%), Query Frame = 1
Query: 1 MDLLIISKAGSVGLDLQCTSKVFMFDLWWNVPQMNQVIGRAIRFKSH-HEPCEHKHVDV 174
+D+++ISKAG V LDL KV M + WN P +QV GRAIRFKSH H P ++V+V
Sbjct: 788 IDIMLISKAGGVALDLVGVRKVIMLESQWNRPGEDQVKGRAIRFKSHYHLPLSKQNVEV 846
BLAST of mRNA_Ecto-sp8_S_contig10651.1014.1 vs. uniprot
Match: A0A6C0BVA3_9ZZZZ (Helicase ATP-binding domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0BVA3_9ZZZZ) HSP 1 Score: 57.8 bits (138), Expect = 4.430e-8 Identity = 26/64 (40.62%), Postives = 45/64 (70.31%), Query Frame = 1
Query: 7 LLIISKAGSVGLDLQCTSKVFMFDLWWNVPQMNQVIGRAIRFKSHHE-PCEHKHVDVYIYQSVF 195
++IIS AGS G+D + +V + D W+N+ ++ Q+IGR +RF SH + P E ++V++Y++ S F
Sbjct: 662 VVIISSAGSEGIDFKYIRQVHILDPWFNINRIEQIIGRGVRFCSHKDLPIEKRNVEIYLHASTF 725
BLAST of mRNA_Ecto-sp8_S_contig10651.1014.1 vs. uniprot
Match: A0A2E7GAT7_9PROT (Helicase ATP-binding domain-containing protein n=1 Tax=Bdellovibrionaceae bacterium TaxID=2026715 RepID=A0A2E7GAT7_9PROT) HSP 1 Score: 57.4 bits (137), Expect = 6.060e-8 Identity = 28/62 (45.16%), Postives = 45/62 (72.58%), Query Frame = 1
Query: 7 LLIISKAGSVGLDLQCTSKVFMFDLWWNVPQMNQVIGRAIRFKSHHE-PCEHKHVDVYIYQS 189
++IISKAGS GLD + +V + + W+N+ +M+Q+IGRA+R KSH P ++V++Y+Y S
Sbjct: 676 VIIISKAGSEGLDFKNIRQVHILEPWFNINRMDQIIGRAVRNKSHCSLPYNKRNVEIYLYGS 737
BLAST of mRNA_Ecto-sp8_S_contig10651.1014.1 vs. uniprot
Match: A0A6C0CVE0_9ZZZZ (Helicase ATP-binding domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0CVE0_9ZZZZ) HSP 1 Score: 57.4 bits (137), Expect = 6.070e-8 Identity = 25/63 (39.68%), Postives = 47/63 (74.60%), Query Frame = 1
Query: 7 LLIISKAGSVGLDLQCTSKVFMFDLWWNVPQMNQVIGRAIRFKSHHE-PCEHKHVDVYIYQSV 192
+++IS+AGS G+DL+C +V + D W+N+ ++ Q+IGRA+R SH E E ++V++++Y ++
Sbjct: 864 VVLISRAGSEGIDLKCIRQVHIMDPWYNMNRVEQIIGRAVRNSSHKELEFEKRNVEIFMYGTI 926 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig10651.1014.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig10651.1014.1 >prot_Ecto-sp8_S_contig10651.1014.1 ID=prot_Ecto-sp8_S_contig10651.1014.1|Name=mRNA_Ecto-sp8_S_contig10651.1014.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=69bp MDLLIISKAGSVGLDLQCTSKVFMFDLWWNVPQMNQVIGRAIRFKSHHEPback to top mRNA from alignment at Ecto-sp8_S_contig10651:891..1097+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig10651.1014.1 ID=mRNA_Ecto-sp8_S_contig10651.1014.1|Name=mRNA_Ecto-sp8_S_contig10651.1014.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=207bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10651:891..1097+ (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig10651:891..1097+ >mRNA_Ecto-sp8_S_contig10651.1014.1 ID=mRNA_Ecto-sp8_S_contig10651.1014.1|Name=mRNA_Ecto-sp8_S_contig10651.1014.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=207bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10651:891..1097+ (Ectocarpus species8 EcLAC_412)back to top |