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Homology
BLAST of mRNA_Ecto-sp8_S_contig1065.1013.1 vs. uniprot
Match: D8LNT2_ECTSI (Glycosyltransferase, family GT47 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNT2_ECTSI) HSP 1 Score: 925 bits (2391), Expect = 0.000e+0 Identity = 473/520 (90.96%), Postives = 477/520 (91.73%), Query Frame = 1
Query: 1 MMINPRGWEVPQQSPSSTRTRSQSPSAVLDGPRCCHPEEHAAADFWWARSRRRGRGLVEIAGQAGAAAEDRPEKEGQNSTTGATAPGFTHHSFFAETDTTTVITTNVAAAPSPTSPLLSSRHSRRRGKHNQTTRTAAVSPAGTVARLFRKNRRILAVVSVAVAALLLILALTAYAGLWPWRDLFPYKGELFQPAKDCLMVNTRAEVACGSPWSAPCFDLSRCRNGGGDLLSVYVHDETCSMRTSSEIMASYGDVAVPPPWDATAETQLWNAAAKTLRHAAAERGLLVDTPDEACIVFYAVPRDKGECVSKTPTWGGGQNHALLDLNDESRAARRSLDGKAMFLQSNMRPCYYRHGYDIAMPLPARRPVERLREVAPQDRKYFATFKGKLYLSGNGLLERSAVLDLMSGGASAAAAAAEGRGEMGGANGDSHSSSSPDVLVVERCCNFHSEQLLSWNKAMCEASQREYDSSPSYGDLMNTTFALLPAGRSPATYRLAEALSAGALPVFIHQVCCPESPGNM 1560
MMINPRGWEVPQQSPSSTRTRSQSPSAVLDGP CCHPEEHAAADFWWARSRRRGR LVEIAGQAGAAAE APGFTHHSFFAETDTT V TTNV AAPSPTSPLLS RHSRRRGKHNQTTRT AVSPAGTVARLF+KNRRILAVVSVAV ALLLILALTA AGLWPWRDLFPYKGE FQPAKDCLMVNTRAEVACGSPWSAPCFDLSRCR+GGGDLLSVYVHDETCSMRTSSEIMASYGDVA+PPPWDA AETQLW TLRHAAAERGLLVDTPDEACIVFYAVPRDKGECVSKTPTWG GQNHALLDLNDESRAAR SLDGKAMFLQSNMRPCYYRHGYDIAMPLPARRPVERLREVAPQDRKYFATFKGKLYLSGNGLLERSAVLDLMSGGASAAAA AEGRGEMG ANGDS SSSSPDVLVVERCCNFHSEQLLSWNKAMCEASQREYDSSPSYGDLMNTTFALLPAGRSPATYRLAEALSAGALPVFIHQ PG +
Sbjct: 1 MMINPRGWEVPQQSPSSTRTRSQSPSAVLDGPSCCHPEEHAAADFWWARSRRRGRALVEIAGQAGAAAEXXXXXXXXXXXXXXXAPGFTHHSFFAETDTTAVTTTNVTAAPSPTSPLLSPRHSRRRGKHNQTTRTTAVSPAGTVARLFQKNRRILAVVSVAVTALLLILALTACAGLWPWRDLFPYKGERFQPAKDCLMVNTRAEVACGSPWSAPCFDLSRCRSGGGDLLSVYVHDETCSMRTSSEIMASYGDVAIPPPWDAAAETQLWXXXXXTLRHAAAERGLLVDTPDEACIVFYAVPRDKGECVSKTPTWGEGQNHALLDLNDESRAARSSLDGKAMFLQSNMRPCYYRHGYDIAMPLPARRPVERLREVAPQDRKYFATFKGKLYLSGNGLLERSAVLDLMSGGASAAAAPAEGRGEMGRANGDSQSSSSPDVLVVERCCNFHSEQLLSWNKAMCEASQREYDSSPSYGDLMNTTFALLPAGRSPATYRLAEALSAGALPVFIHQDFVKPFPGKI 520
BLAST of mRNA_Ecto-sp8_S_contig1065.1013.1 vs. uniprot
Match: A0A6H5JXY3_9PHAE (GT47 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXY3_9PHAE) HSP 1 Score: 725 bits (1872), Expect = 3.460e-258 Identity = 376/428 (87.85%), Postives = 382/428 (89.25%), Query Frame = 1
Query: 247 ATAPGFTHHSFFAETDTTTVITTNVAAAPSPTSPLLSSRHSRRRGKHNQTTRTAAVSPAGTVARLFRKNRRILAVVSVAVAALLLILALTAYAGLWPWRDLFPYKGELFQPAKDCLMVNTRAEVACGSPWSAPCFDLSRCRNGGGDLLSVYVHDETCSMRTSSEIMASYGDVAVPPPWDATAETQLWNAAAKTLRHAAAERGLLVDTPDEACIVFYAVPRDKGECVSKTPTWGGGQNHALLDLNDESRAARRSLDGKAMFLQSNMRPCYYRHGYDIAMPLPARRPVERLREVAPQDRKYFATFKGKLYLSGNGLLERSAVLDLMSGGASAAAAAAEGRGEMGGANGDSHSSSSPDVLVVERCCNFHSEQLLSWNKAMCEASQREYDSSPSYGDLMNTTFALLPAGRSPATYRLAEALSAGALPVFIHQ 1530
A APGFT HSFFAETD TTNV AAP PTSPL+S RHSRR G+HNQTTRTAAVSPAGTVARLFRKNRRILAV+SVAVAALLLILALTAYAGLWPWRDLFPYKG LF PAKDCLMVNTRAEVACGSPWSAPCFDLSRCR GGG LSVYVHDETCSMR +SEIMASYGDVAV PPWDA AETQL LR AAAERGLLVDTPDEACIVFYAVPRDK ECVSKTPTWGGGQNHALLDLNDESRAARRSLDGKAMFLQSNMRPCYYRHGYDIAMPLPARRPVERLRE GKLYLSGNG LERSAVLDLMSGGASAA A AEGRGEM GANGDSHSSSSPDVLVVERCCNFHSEQLLSWNKAMCEASQREY SSPS+G+LMNTTFALLPAGRSPATYRLAEALSAGALPVFIHQ
Sbjct: 2 AAAPGFTRHSFFAETDVKAATTTNVTAAPRPTSPLMSPRHSRRCGQHNQTTRTAAVSPAGTVARLFRKNRRILAVISVAVAALLLILALTAYAGLWPWRDLFPYKGVLFHPAKDCLMVNTRAEVACGSPWSAPCFDLSRCRGGGGGSLSVYVHDETCSMRKTSEIMASYGDVAVSPPWDAAAETQLXXXXXXXLRLAAAERGLLVDTPDEACIVFYAVPRDKAECVSKTPTWGGGQNHALLDLNDESRAARRSLDGKAMFLQSNMRPCYYRHGYDIAMPLPARRPVERLRE-------------GKLYLSGNGFLERSAVLDLMSGGASAAVARAEGRGEMEGANGDSHSSSSPDVLVVERCCNFHSEQLLSWNKAMCEASQREYYSSPSFGELMNTTFALLPAGRSPATYRLAEALSAGALPVFIHQ 416
BLAST of mRNA_Ecto-sp8_S_contig1065.1013.1 vs. uniprot
Match: D7FXN9_ECTSI (Glycosyltransferase, family GT47 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXN9_ECTSI) HSP 1 Score: 506 bits (1303), Expect = 1.420e-171 Identity = 317/547 (57.95%), Postives = 352/547 (64.35%), Query Frame = 1
Query: 4 MINPRGWEVPQQSPSSTRTRSQSPSAVLDGPRCCHPEEHAAADFWWARSRRRGRGLVEIAGQAGAAAEDRPEKE-GQNSTTGATAPGFTHHSFFAETDTTTVITTNVAAAPSPTSPLLSSRHSRRRGKHNQTTRTAAVSPAGTVAR-LFRKNRRI--LAVVSVAVAALLLILALTAYAGLWPWRDLFPYKGELFQPAKDCLMVNTRAEVACGSPWSAPCFDLSRCRNGGG-----------------------DLLSVYVHDETCSMRTSSEIMASYGDVAVPPPWDATAETQLWNAAAKTLRHAAAERGLLVDTPDEACIVFYAVPRDKGECVSKTPTWGGGQNHALLDLNDESRAARRSLDGKAMFLQSNMRPCYYRHGYDIAMPLPARRPVERLREVAPQDRKYFATFKGKLYLSGNGLLERSAVLDLMSGGASAAAAAAEGRGEMGGANGDSHSSSSPDVLVVE-RCCNFHSEQLLSWNKAMCEASQREYDSSPSYGDLMNTTFALLPAGRSPATYRLAEALSAGALPVFIHQVCCPESPGNM 1560
M + RGWEVPQ SPS T T SQSPSAVL+GP E+HAA D ARSRR+GRGLV ++ +AGA EDRP KE GQ STT TAPGFT HSF A T+ TTV TNVAAAPSP LS R SRRR H++T T A SP T AR L RKN L VVS+AVA LL+ILAL AY GLWPWRDLFPY+GELFQP +DC V+T AEVACGSPWSAPCFD +RCR+GGG DLLSVYVHDETCSMR SSEIMASY VAVP LWN AAK LRH AAER LL+DTPDEACIVFYAVP ++GECVSKTPTWGGGQNH LLDLND+SR LR+++P+DRKYFATFKG LYL+GNG+LERSAVL+L G RC + H EQLLSWNK +C+AS+R++D S SY DLMNTTFALLPAGRSPATYRLAEALSAGALPVFIHQ PG +
Sbjct: 1 MRSHRGWEVPQ-SPSCTGTGSQSPSAVLNGPSGADTEQHAA-DLGRARSRRKGRGLV-VSARAGAG-EDRPSKEEGQRSTTATTAPGFTRHSFLAGTEGTTV--TNVAAAPSPP---LSPRPSRRRVHHSKTPGTPAASPTPTAARRLSRKNPLAVCLTVVSIAVAVLLVILALAAYGGLWPWRDLFPYRGELFQPDRDCRRVSTGAEVACGSPWSAPCFDRTRCRSGGGRSGRRRARAAXXXXGSTRGAGGGDLLSVYVHDETCSMRKSSEIMASYRGVAVP---------LLWNEAAKALRHVAAERDLLMDTPDEACIVFYAVP-ERGECVSKTPTWGGGQNHVLLDLNDQSR----------------------------------------LRKISPRDRKYFATFKGSLYLTGNGMLERSAVLNLRGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRCHHLHHEQLLSWNKGLCDASERDFD-SVSYEDLMNTTFALLPAGRSPATYRLAEALSAGALPVFIHQDFVKPFPGQV 487
BLAST of mRNA_Ecto-sp8_S_contig1065.1013.1 vs. uniprot
Match: A0A6H5JRU9_9PHAE (GT47 protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JRU9_9PHAE) HSP 1 Score: 190 bits (482), Expect = 5.490e-50 Identity = 126/316 (39.87%), Postives = 162/316 (51.27%), Query Frame = 1
Query: 595 MVNTRAEVACGSPWSAPCFDLSRCR----NGGGDLLSVYVHDETCSMRTSSEIMASYGDVAVPPPWDATAETQLWNAAAKTLRHAAAERGLLVDTPDEACIVFYAVPR-DKGECVSKTPTWGGGQNHALLDLNDESRAARRSLDGKA-MFLQSNMRPCYYRHGYDIAMPLPARRPVERLREVAPQDRKYFATFKGKLYLSGNGLLERSAVLDLMSGGASAAAAAAEGRGEMGGANGDSHSSSSPDVLVVERCCNFHSEQLLSWNKAMCEASQREYDSSPSYGDLMNTTFALLPAGRSPATYRLAEALSAGALPVFI 1524
M +ACG+P + PCFD SRCR G S+YV D TCS+ SS A+PP ++ + W R AA + G+L +T +AC+ + R + C ++ P W GG+NH ++DL D +R + + G A M SNMR C+YR GYD A+PL + L E+AP R YF T KG LYLSG G ER +V+ L S E G + G N C H E LL N+ C A E S Y DLMNTTF L+PAGR PATYRLAE +SAGA+PVF+
Sbjct: 182 MAAVAPSMACGAPLAEPCFDHSRCRPHASGGAPSKPSIYVFDATCSLADSS---------ALPPSNESLMLSHTW-------REAARDAGVLSETYRDACLFLHVNKRLNHVPCPAEKPLWNGGKNHVMVDLTDRTRDKKPLIAGSAAMDASSNMRSCFYRSGYDFAVPLRHQWGFGNLTELAPWHRDYFLTVKGNLYLSGVGYDERMSVVPLHS----------EPEGVIMGLN----------------CFELHDEHLLPENEEFCLALN-ETASRHEYEDLMNTTFGLVPAGRQPATYRLAEVMSAGAIPVFV 454
BLAST of mRNA_Ecto-sp8_S_contig1065.1013.1 vs. uniprot
Match: A0A6H5JGQ8_9PHAE (GT47 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGQ8_9PHAE) HSP 1 Score: 179 bits (454), Expect = 6.220e-47 Identity = 113/306 (36.93%), Postives = 153/306 (50.00%), Query Frame = 1
Query: 616 VACGSPWSAPCFDLS--RCRNGGGDLLSVYVHDETCSMRTSSEIMASYGDVAVPPPWDATAETQLWNAAAKTLRHAAAERGLLVDTPDEACIVFYAVPRDKGECVSKTPTWGGGQNHALLDLNDESRAARRSLDGK-AMFLQSNMRPCYYRHGYDIAMPLPARRPVERLREVAPQDRKYFATFKGKLYLSGNGLLERSAVLDLMSGGASAAAAAAEGRGEMGGANGDSHSSSSPDVLVVERCCNFHSEQLLSWNKAMCEASQREYDSSPSYGDLMNTTFALLPAGRSPATYRLAEALSAGALPVFI 1524
+ CG P S PCF + C G +YV D CS+ +SE+ + V W + W LR+ A + G+L +T + ACI+ + P C P W GG NH L+D++D+ R +R + G AM +NM C+YR GYDI++PL + L +V P DR +F T KG LYLSG+G ER +++ L ANG V++ C H E LL N C A +YD SY LMNTTF L+PAGRSP TYRL E +SAG++PVF+
Sbjct: 78 MQCGPPLSPPCFQCNSTECLGNAG----IYVFDSECSLLETSELRVPDEEQKVSWAWMDHHYVE-W-----VLRNEAEQMGMLAETYESACILVHVSPGSTKPCAVDQPRWNGGANHLLVDMSDKGRDSRPDVAGSYAMEAATNMHTCFYRSGYDISVPLAPKHVFNDLADVDPWDRNFFLTTKGSLYLSGHGSGERMSLVPLQD-----------------EANG---------VIMSLHCFEVHEEHLLPENVEYCRALSDQYDDH-SYTSLMNTTFGLVPAGRSPGTYRLGEVMSAGSIPVFV 346
BLAST of mRNA_Ecto-sp8_S_contig1065.1013.1 vs. uniprot
Match: A0A836CBB1_9STRA (Exostosin family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBB1_9STRA) HSP 1 Score: 161 bits (408), Expect = 7.770e-41 Identity = 113/313 (36.10%), Postives = 153/313 (48.88%), Query Frame = 1
Query: 604 TRAEVACG---SPWSAPCFDLSRCRNGGGDL-LSVYVHDETCSMRTSSEIMASYGDVAVPPPWDATAETQLWNAAAKTLRHAAAERGLLVDTPDEACIVFYA---VPRDKGECVSKTPTWGGGQNHALLDLNDESRAARR-SLDGKAMFLQSNMRPCYYRHGYDIAMPLPARRPVERLREVAPQDRKYFATFKGKLYLSGNGLLERSAVLDLMSGGASAAAAAAEGRGEMGGANGDSHSSSSPDVLVVERCCNFHSEQLLSWNKAMCEASQREYDSSPSYGDLMNTTFALLPAGRSPATYRLAEALSAGALPV 1518
T A ACG + + PCFD SRC + G +VYVH TCS++ SSE++ A + WN ++ H A G LV+TP EAC++ + R +CV TPTW G NH L+DL D +R +L + F +SN+ R GYD+A+ LP + L R+Y TF G +Y + + L+ A A A+G V+VV RC + N C A +R+YD+ YGDL+NTTFAL+PAGR PATYRL EA+SAGA+PV
Sbjct: 7 TSAYAACGGTDAQLAPPCFDPSRCLSANGTANFTVYVHSPTCSLQPSSELLQR---------GQAGGSSHDWNRVWRSAVHRA---GALVETPQEACLIAFVGDMYTRYTQQCVPLTPTWRRGLNHVLIDLTDRARGVTYWTLSPRVAFAKSNLAASALRAGYDVAVALPPKGAFAHLEPAPAARRRYLLTFCGTVYPTRRWRQHGWERMHLL-----ALHAPADG------------------VVVVGRCSELRGDHARRENADRCAALRRDYDAYD-YGDLLNTTFALVPAGRQPATYRLLEAMSAGAIPV 283
BLAST of mRNA_Ecto-sp8_S_contig1065.1013.1 vs. uniprot
Match: D7G4H1_ECTSI (Glycosyltransferase, family GT47 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4H1_ECTSI) HSP 1 Score: 158 bits (399), Expect = 4.510e-40 Identity = 99/279 (35.48%), Postives = 145/279 (51.97%), Query Frame = 1
Query: 694 VYVHDETCSMRTSSEIMASYGDVAVPPPWDATAETQLWNAAAK-TLRHAAAERGLLVDTPDEACIVFYAVPRDKGECVSKTPTWGGGQNHALLDLNDESRAARRSLDGK-AMFLQSNMRPCYYRHGYDIAMPLPARRPVERLREVAPQDRKYFATFKGKLYLSGNGLLERSAVLDLMSGGASAAAAAAEGRGEMGGANGDSHSSSSPDVLVVERCCNFHSEQLLSWNKAMCEASQREYDSSPSYGDLMNTTFALLPAGRSPATYRLAEALSAGALPVFI 1524
+YV D CS+ +S++ A V + T++ + + LR+ A + G+L +T + ACI+ + P C P W GG NH L+D++D R +R + G AM SNM+ C+YR G+DI++PL +++ L +VA DR +F T KG LYLS +G ER +++ L ANG V++ C H+E LL N C A Y SY LMN+TF L+PAGRSP T+RL E +SAG++PVF+
Sbjct: 6 IYVFDSECSLLETSKLRAQDEGKKV-------SSTRMHHHYVEWVLRNEAEQMGMLAETYESACILVHVSPGSTKPCAVDQPRWSGGANHLLVDMSDNGRGSRPIVAGSYAMEAASNMQTCFYRSGFDISVPLHSKKAFNNLADVAAWDRNFFLTTKGSLYLSRHGSGERMSLVPLQD-----------------EANG---------VIMSLHCFELHNEHLLPENVEYCRALSDRYGDH-SYESLMNSTFGLVPAGRSPGTFRLGEVMSAGSIPVFV 250
BLAST of mRNA_Ecto-sp8_S_contig1065.1013.1 vs. uniprot
Match: A0A6H5L9T2_9PHAE (GT47 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9T2_9PHAE) HSP 1 Score: 158 bits (400), Expect = 1.330e-38 Identity = 116/336 (34.52%), Postives = 164/336 (48.81%), Query Frame = 1
Query: 553 PYKGELFQPAKDCLMVNTRAEVA----CGSPWSAPCFDLSRCRNGGGDLLSVYVHDETCSMRTSSEIMASYGDVAVPPPWDATAETQLWNAAAKTLRHAAAERGLLVDTPDEACIVFYAVPRDKGE-CVSKTPTWGGGQNHALLDLND---ESRAARRSLDGK-AMFLQSNMRPCYYRHGYDIAMPLPARRPVERLREVAPQ---DRKYFATFKGKLYLSGNGLLERSAVLDLMSGGASAAAAAAEGRGEMGGANGDSHSSSSPDVLVVERCCNFHSEQLLSWNKAMCEASQREYDSSPSYGDLMNTTFALLPAGRSPATYRLAEALSAGALPVFI 1524
P K E Q + + N A A CG P + PCFD SRC + + +YV+D+ CS+ S+++ + D + W R A GLL +T +EAC+ + + E C ++ P W GG NH +++ + + AR + AM + CYYR GYD+++PL P + + AP DR YF TFKG LYL G GL ERSAV + ANG V+ V +C N H ++ L N+ C+ S++ YD Y LMNTTFAL+PAGRSP ++RL E +SAGA+PVF+
Sbjct: 156 PIKDEWVQRCSN--LENATAAFAQGSVCGPPLTKPCFDHSRCGSVSSRPM-IYVYDQECSLADSNKLR-----INDHTNLDKQHQGSYW-------REAVWRAGLLANTYEEACLFIHVNTHNHDEPCATRAPLWNGGVNHIMMEFTPWWIKGQRARPHISNTYAMDWSFDALSCYYRSGYDLSLPLV---PGKVFPDTAPSPAPDRDYFLTFKGTLYLRGYGLEERSAVSRVHD-----------------PANG---------VVSVIKCSNMHGDESLPENQDYCQRSRKRYDLYD-YEKLMNTTFALVPAGRSPGSFRLGEVMSAGAIPVFV 446
BLAST of mRNA_Ecto-sp8_S_contig1065.1013.1 vs. uniprot
Match: A0A6H5JVE6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVE6_9PHAE) HSP 1 Score: 143 bits (361), Expect = 1.270e-37 Identity = 72/83 (86.75%), Postives = 74/83 (89.16%), Query Frame = 1
Query: 1 MMINPRGWEVPQQSPSSTRTRSQSPSAVLDGPRCCHPEEHAAADFWWARSRRRGRGLVEIAGQAGAAAEDRPEKEGQNSTTGA 249
M+INPRGWEVPQQSPSSTRTRSQSPSAVLDGP CCHPEEHAAAD WWARSRRRGRGLVE G AG AAEDRPE+ GQN TT A
Sbjct: 1 MVINPRGWEVPQQSPSSTRTRSQSPSAVLDGPSCCHPEEHAAADVWWARSRRRGRGLVETGG-AGVAAEDRPEEGGQNFTTAA 82
BLAST of mRNA_Ecto-sp8_S_contig1065.1013.1 vs. uniprot
Match: D7G4H3_ECTSI (Glycosyltransferase, family GT47 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4H3_ECTSI) HSP 1 Score: 113 bits (282), Expect = 6.550e-25 Identity = 68/164 (41.46%), Postives = 88/164 (53.66%), Query Frame = 1
Query: 1033 SNMRPCYYRHGYDIAMPLPARRPVERLREVAPQDRKYFATFKGKLYLSGNGLLERSAVLDLMSGGASAAAAAAEGRGEMGGANGDSHSSSSPDVLVVERCCNFHSEQLLSWNKAMCEASQREYDSSPSYGDLMNTTFALLPAGRSPATYRLAEALSAGALPVFI 1524
SNM C+YR G+DI++PLP+ + L +VA DR +F T KG LYLSG+G ER +++ L ANG V++ C H E LL N C A Y SY LMN+TF L+PAGRSP TYRL E +SAG++PVF+
Sbjct: 5 SNMHTCFYRSGFDISVPLPSNKAFNNLADVAAWDRNFFLTTKGTLYLSGHGSGERMSLVPLQD-----------------EANG---------VIMSLHCFEIHDEHLLPENVEYCRALSDRYGDH-SYESLMNSTFGLVPAGRSPGTYRLGEVMSAGSIPVFV 141
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Stop | 1 |
| Start | 1 |
| Seed ortholog score | 932.2 |
| Seed ortholog evalue | 1.1e-268 |
| Seed eggNOG ortholog | 2880.D8LNT2 |
| Preferred name | EXTL1 |
| Model size | 1663 |
| KEGG ko | ko:K02366,ko:K02368,ko:K21988 |
| KEGG TC | 1.A.17.4 |
| KEGG Reaction | R05935,R05936,R10138,R10139 |
| KEGG Pathway | ko00534,ko01100,map00534,map01100 |
| KEGG Module | M00059 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000003,GO:0000139,GO:0000271,GO:0000902,GO:0000904,GO:0001501,GO:0001503,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0005794,GO:0005975,GO:0005976,GO:0006022,GO:0006023,GO:0006024,GO:0006029,GO:0006040,GO:0006044,GO:0006082,GO:0006790,GO:0006807,GO:0006810,GO:0006897,GO:0006928,GO:0006935,GO:0006950,GO:0006986,GO:0006996,GO:0007005,GO:0007154,GO:0007165,GO:0007275,GO:0007276,GO:0007369,GO:0007399,GO:0007409,GO:0007411,GO:0007417,GO:0007420,GO:0007492,GO:0007498,GO:0008150,GO:0008152,GO:0008194,GO:0008354,GO:0008375,GO:0008589,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009605,GO:0009653,GO:0009790,GO:0009792,GO:0009888,GO:0009966,GO:0009967,GO:0009987,GO:0010033,GO:0010646,GO:0010647,GO:0012505,GO:0015012,GO:0015014,GO:0015020,GO:0016020,GO:0016021,GO:0016043,GO:0016051,GO:0016192,GO:0016477,GO:0016740,GO:0016757,GO:0016758,GO:0019538,GO:0019899,GO:0019953,GO:0021537,GO:0021772,GO:0021988,GO:0022008,GO:0022412,GO:0022414,GO:0023051,GO:0023052,GO:0023056,GO:0030030,GO:0030111,GO:0030154,GO:0030166,GO:0030176,GO:0030177,GO:0030182,GO:0030201,GO:0030202,GO:0030203,GO:0030210,GO:0030900,GO:0030968,GO:0031090,GO:0031175,GO:0031224,GO:0031227,GO:0031984,GO:0032501,GO:0032502,GO:0032504,GO:0032989,GO:0032990,GO:0033554,GO:0033692,GO:0034620,GO:0034637,GO:0034645,GO:0034976,GO:0035295,GO:0035966,GO:0035967,GO:0036465,GO:0036498,GO:0040011,GO:0042175,GO:0042221,GO:0042328,GO:0042330,GO:0042802,GO:0042803,GO:0043009,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044272,GO:0044281,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0045880,GO:0046982,GO:0046983,GO:0048311,GO:0048312,GO:0048468,GO:0048488,GO:0048513,GO:0048518,GO:0048522,GO:0048565,GO:0048583,GO:0048584,GO:0048598,GO:0048609,GO:0048666,GO:0048667,GO:0048699,GO:0048706,GO:0048731,GO:0048812,GO:0048856,GO:0048858,GO:0048869,GO:0048870,GO:0050508,GO:0050509,GO:0050789,GO:0050794,GO:0050808,GO:0050896,GO:0051179,GO:0051234,GO:0051640,GO:0051641,GO:0051646,GO:0051649,GO:0051674,GO:0051704,GO:0051716,GO:0055123,GO:0060322,GO:0060465,GO:0060828,GO:0061564,GO:0065007,GO:0070887,GO:0071310,GO:0071704,GO:0071840,GO:0072498,GO:0090092,GO:0090097,GO:0090098,GO:0090100,GO:0090263,GO:0097485,GO:0098588,GO:0098657,GO:0098791,GO:0098827,GO:0099003,GO:0099504,GO:0120036,GO:0120039,GO:1901071,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576,GO:1903510 |
| Exons | 7 |
| EggNOG free text desc. | macromolecule glycosylation |
| EggNOG OGs | KOG1021@1,KOG1021@2759 |
| EC | 2.4.1.224,2.4.1.225 |
| Cds size | 1632 |
| COG Functional cat. | S |
| CAZy | GT47,GT64 |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko00002,ko01000,ko01003,ko02000 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1681143161.8205333-CDS-Ecto-sp8_S_contig1065:6024..6274 | 1681143161.8205333-CDS-Ecto-sp8_S_contig1065:6024..6274 | Ectocarpus species8 EcLAC_412 | CDS | Ecto-sp8_S_contig1065 6025..6274 + |
| 1681143161.8359895-CDS-Ecto-sp8_S_contig1065:11303..11615 | 1681143161.8359895-CDS-Ecto-sp8_S_contig1065:11303..11615 | Ectocarpus species8 EcLAC_412 | CDS | Ecto-sp8_S_contig1065 11304..11615 + |
| 1681143161.8507118-CDS-Ecto-sp8_S_contig1065:12503..12789 | 1681143161.8507118-CDS-Ecto-sp8_S_contig1065:12503..12789 | Ectocarpus species8 EcLAC_412 | CDS | Ecto-sp8_S_contig1065 12504..12789 + |
| 1681143161.8603215-CDS-Ecto-sp8_S_contig1065:13867..14008 | 1681143161.8603215-CDS-Ecto-sp8_S_contig1065:13867..14008 | Ectocarpus species8 EcLAC_412 | CDS | Ecto-sp8_S_contig1065 13868..14008 + |
| 1681143161.8690486-CDS-Ecto-sp8_S_contig1065:14997..15166 | 1681143161.8690486-CDS-Ecto-sp8_S_contig1065:14997..15166 | Ectocarpus species8 EcLAC_412 | CDS | Ecto-sp8_S_contig1065 14998..15166 + |
| 1681143161.8778584-CDS-Ecto-sp8_S_contig1065:16001..16196 | 1681143161.8778584-CDS-Ecto-sp8_S_contig1065:16001..16196 | Ectocarpus species8 EcLAC_412 | CDS | Ecto-sp8_S_contig1065 16002..16196 + |
| 1681143161.886484-CDS-Ecto-sp8_S_contig1065:16969..17248 | 1681143161.886484-CDS-Ecto-sp8_S_contig1065:16969..17248 | Ectocarpus species8 EcLAC_412 | CDS | Ecto-sp8_S_contig1065 16970..17248 + |
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1681143161.898739-UTR-Ecto-sp8_S_contig1065:17248..17279 | 1681143161.898739-UTR-Ecto-sp8_S_contig1065:17248..17279 | Ectocarpus species8 EcLAC_412 | UTR | Ecto-sp8_S_contig1065 17249..17279 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig1065.1013.1 >prot_Ecto-sp8_S_contig1065.1013.1 ID=prot_Ecto-sp8_S_contig1065.1013.1|Name=mRNA_Ecto-sp8_S_contig1065.1013.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=544bp
MMINPRGWEVPQQSPSSTRTRSQSPSAVLDGPRCCHPEEHAAADFWWARS
RRRGRGLVEIAGQAGAAAEDRPEKEGQNSTTGATAPGFTHHSFFAETDTT
TVITTNVAAAPSPTSPLLSSRHSRRRGKHNQTTRTAAVSPAGTVARLFRK
NRRILAVVSVAVAALLLILALTAYAGLWPWRDLFPYKGELFQPAKDCLMV
NTRAEVACGSPWSAPCFDLSRCRNGGGDLLSVYVHDETCSMRTSSEIMAS
YGDVAVPPPWDATAETQLWNAAAKTLRHAAAERGLLVDTPDEACIVFYAV
PRDKGECVSKTPTWGGGQNHALLDLNDESRAARRSLDGKAMFLQSNMRPC
YYRHGYDIAMPLPARRPVERLREVAPQDRKYFATFKGKLYLSGNGLLERS
AVLDLMSGGASAAAAAAEGRGEMGGANGDSHSSSSPDVLVVERCCNFHSE
QLLSWNKAMCEASQREYDSSPSYGDLMNTTFALLPAGRSPATYRLAEALS
AGALPVFIHQVCCPESPGNMEVAAQRVACRNVQYRWAHQGAMV* back to topmRNA from alignment at Ecto-sp8_S_contig1065:6025..17279+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_Ecto-sp8_S_contig1065.1013.1 ID=mRNA_Ecto-sp8_S_contig1065.1013.1|Name=mRNA_Ecto-sp8_S_contig1065.1013.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=11255bp|location=Sequence derived from alignment at Ecto-sp8_S_contig1065:6025..17279+ (Ectocarpus species8 EcLAC_412)
ATGATGATTAATCCTCGAGGATGGGAAGTTCCTCAGCAGAGCCCATCCAG
CACGAGGACAAGAAGCCAGTCGCCCTCAGCTGTATTGGACGGACCACGTT
GTTGCCACCCGGAGGAACATGCTGCTGCTGATTTCTGGTGGGCGAGATCG
AGAAGAAGGGGAAGAGGGCTCGTGGAAATAGCAGGACAAGCAGGAGCAGC
AGCGGAGGACAGGCCTGAGAAAGAAGGGCAAAACTCCACCACAGGTGCGA
GTGAGAGAGACCCAAGCATAGGGAAATCTTCCCTGTAGGTTGGCGATAAA
CGGCATTCACGTTTTTTTGGCAGCAGTGAACGCCGGGAAAAAAACAAGAA
GAGATTCCTTACAGGAGATGTTTTTCACATGTTCGGAGAAGCCGTTGTCG
TTCTCGTTACAAAATGTATACATGCCTACAGCAGTATTTCGTACCGTCGC
CGAGGTCCACCCGTTCCTCCCTCAAACCTTGTGCCAATGCTCGGTGGACT
CCAAGATAACGGGTCGCGCTTTCGTCTCACAGTAGCAGTCGCAGTGTGGA
CTAGGATGCTGCTGCTGATATTGTACTTGTAAGCCAATACTACAGCAGTA
CCATCGCCCCCCCGGCTTGTCCTCCTCGTTAGCTGAAACTACTTGTGACA
TTTTTCCGGGTCACGGCTTTTGGGTCACGTTCTTCAAAGTTCTTAGGTGA
TTTCTCATGGTTCCTCGTCAAGCCTCGTAAGCATTCAAGTAATGATTCTC
AAGGTACGGGGTTAGATAGCGTTGTGGTTACGTAAGGTTAGGGTCGTACC
TCATGGTACCTCATGGCACCTCATGGTCTATCATGAAATGTATCTCATGG
TGCACCATACGATTGGTCATGGTGCCCCATGAGACCCCACGAGAACGGCG
ATCTCCGGGAGTTTTGGTAACGCCCATGGGCAGCCCATGGACTAACTGCC
CACGACGTGCCCACCGTGGGCACTTCAACCCAGAACTTCGCACCGGCACA
TCAACCTAGAACTTAGCCACTGCGCCAACCTATGAAGTAGCACGTATCGT
GTGGGCTCGGGGGTTTAGCGTTAGTTTTGTTTGCCGTCATGATGCCCCTT
CCAAAGCAGATTATCTACTCCTGTACGTAGAACTACGTAGTTCCGGTTGA
AGGGCACATAATGACGGTTCATGGGTTGCCCATGGTTCATGGGCAGCCCA
TGAACTGCCCACCATGAGCTGCCAATGGGCAGATTATCAAAACTACCGGA
AGTGTGGGAGACCCGAGGATGGTGCCTCATGAGACACCATGTATGGTGCC
CCATGGTGCACAACGCTCACGTTGTTCGTATGAGAAATCTCACGGTGTCT
CATGATAACTTTCCTCATGGGGCACATTGAGATATCATGGAGTATCATGA
GGCACCACGAGATCCGCAAGAAAATGAAAAGACAGAACACTCAAGGCATC
ATGTTGACTCATGGTGCACCTCGAGTTCTCATGGGCAGTTGCTCATGGGG
CACCATGGCGCACCATGGGGCAGACATGGTAATGATATCACATGAGATGA
TTCTCATTGTGCTCTATAAGGCCTCATGGTTCCTCATGGTGCCTCATGGT
GGCCCCTACAACGCCGTTTTTTCATTACCACAAAATGTTATTTTCTGCTC
ACGCATTGTGCGGCGTCTGTCTTTGCATTTGATTTATTTCAGCCCTCATC
ACTCACGGGGGGGTACAGGACCTTGTAGCGAGAGCGAGGCGTAACAGCTA
ATCATTTTCGCGTCTAGGGTGTGACCTTGGTATGTACAGCTGTCGGCTGT
GCGAAATCGGGGTGGAGTAGGGGCGGCAAGGAAAGCAGCGACACAATTTG
TTTAGCACGTTGTGAAAGCAAGCAGAGAAAACAAGAACTTGTAGGATTCG
GCACGAAAAAATACGAACTCGAACAACGTATGCTGCATTTTTTCAGCCCC
ACAACAAGAGTTTAAGCATGGACCCGAGTTGGCGTTCGTTGATTGCGGGC
GCCAACTGTACAGCATTTGCCTATGTACACGTTATGCAAGACGAATTCAT
GCATGCATGTGCATCATTTGTTATTTTTCGTGCTTCGGCAAATCTTCCTC
TTCCTCTAGCGGCAGCCTATTATTTTTCACGCTTCTGTCTCAGGGACACG
CAGGGGGCTCGTCGGTCATTACCCCGCACGCCCGAGGGCGGCCAGGCATC
AGCGGCATGTGCAATCGATGCCTAACGCCGCCGCGACTGGCTTGCAAGAG
GGGGCATTCCGAACCAAAAGAGGCTACGTTCATATTAGTACAACACTGCT
CTGCAAACATTTTTCGCAAGCACACATTCCCACTATGAGATACACAGTAC
GACGACATGAGAGCAAGCGACCAAACGCAGCGGGTTACAGCTGTAGGATC
TGCGGCAAAGACACCGCTAGCCTTGAGGAACACACTCATGCACACGCTAA
TAGTCAGAAAAACAAATCCTTCGCGCACGACGTGAAATACTAGTTTGTGG
GGAAAGTCGGAACTAAATATCCACCGTTGAGATACGTGCATGATGGCATT
GCAATGCCAGCCATTCGGCTACCAACCCTGGAAGGGCGGGCAGAAATCAC
CCTGGCGAGGTCTCCCTGGGGAAGTCACCCTGACGGTTGACCCGCCTGTA
CAGGTGGGTACGTTGCCAAGGTGACTGCTCTCACACCCTGTGCGTACCCT
GCAACTCACTTTGCAACACCCTGCCAAGACCCTCAAGGGCATGGCACGTC
TAATAGTGCTGCTGAAGCTGTGAAGCTTCGGCAGAACAAAGCCCTTCGCA
ACAACATGGCGACTTGCGAACTGTAGTGTAGGACATGTGTTTTGCCCTCG
GCGCAGTTCTCCTCCTTGTTTGGCGGTAAAGTACGCATGTATAGTGTAAA
CTAACCTGCACCCACCACCCTCATTATCATCATCAAGATATGTCTACCGT
GCCCCCCCCTACTCGAGCAAGTAATTTGGGCGCTCAACCTTTTGAGAACC
CCCGTATGAAACTAACTTGCAAACTTTGTGTTTCCACCCTACCGAGAAAC
TTGATCGCAAACCTCCACAAAACCCACACAGAAGTTACGGGGTGGTACAA
AACATCGCCAGGTCAAGACGGGGCGTAAGACATTTGAATCACGTTCAAGC
AGGAATACGGAAGCTCCAGACAGTTTCGTGCCGCAAAGTTTCCAGGCAAG
CCCGTTCGAACGCAAGGTAACGTTGGAGGCGATGTAACCATATGTCTAAT
GTCCCTACGAAAGGCATCGAACTTCACGACGGCATGTGTGACGCGTGTTT
TGGCTTCACTAGAACATATATTTTTGGTGATTTTAGGGCGCTTCAATCAT
GCCATTTTTGGTGGGTGACATACTGAAAACGCTAGAATTTGAAAGGATTT
GGTTCAAAACAAAAATTGGGAACAACCGCTAAACGAAAGATGAAAGATGG
TCAGTTCTCAGTTCTCAGTTCTCTACAGTTCTCTCTTGAAGCTTTGGTTG
GGTGGCACCAGATGGCACAACTCGACCATATTTGAACATTTTACGAACGA
AGCTGCTTCCAAAACACGTTCCCACCTCCCTCGTCCTGCCTCCCTCTCTT
CATCCTGACATATTTCTACGGCAGCCGACACGCAAAACCCCAGCCAAAGC
CCACCACCAGTCCAGCCAGTAACAATGAAAGATGCAGACATCTGGTCGGC
CGTATCGAAGTCACTTCTCGAGCTTGCGCTAGGTACAAAACCAACGCCAC
AATAAATAGCAGATCTACAACAACCCCACACGACGTGCTGGTTACATGTA
GCGCCGCGAAAGAGCAGTCTTTTTTTTGCGGGCAGCACTCTTCTTCCACT
AATACACAGCTGTGCCTGTATCTGTGGCTGAGACTTGTTCTACTGAATCC
ACCGGCGTGGAGGACCCTCCGTCCTGGTCCGCTGGTGGTAGGGTACTCAT
GGGGTGCTCACGTCTGCTGTTCTGTGGTCAATAGGACGCTGAAAGAAAGG
CGGGGGCTCCGTATATGTATATTTTCGATTCACGGAGCCCCCCCCCAAAA
TATCGGCAACATATCGGTGCCCGCGATAGATATTCGATACGATAAATATC
GGCCGATTATATCGTATATATCGGCCCCGACACACAGCCCTACATATTTG
GATATTTCTGGCGCCTCGGCATGGTGAACTCTATTTCCGAGCCATTTCCT
GCTTCGTCGCCCATTTTTCTCTCGTGCGGAGACTCTGGAAACTGCTGCCG
CTCCCGTCCCGCCCGGTCTCGCTACCATCTTCTCCTGGCTATTCCATGCT
CCAATATGAACTCGTAATCATAGTTTTCCCGGCTCTCAGTCGTGTACATT
TCTCTCTCCTGTTCGTAAAACGTACATGTCGGCAACTTCTTGAACCGGTC
CTGGCATTTACAACCTGGGGGGGATACTGGCCAATTTTTCGGCTGGTTAT
GTCAGTCCAGGTTGTGTAAGAGTCTAATGTGATACAAGTTACGACGAGCA
GCAGTTTGCCCCCACAAAACTGGAGCACAGCTCATGTCGAAACTTCACTT
TCCCATACCGTCAACGTAGGGTGCGAGGTGCTTCATCACGACGCCCCATA
CGATCTTGTCAGGGTTCGTCTGCAAATACTCGAGACGTCATCCGGCGGCA
GTGGCGAAGGTGTGCTCTACTGCTCACACCCTGACACAAGAAACCCTAAC
CTCACCGACGGAGGAACATACGGAAAATATGTCATCACACTGCTAACGGA
AATCAAATCTGGAATGAGTACAAACGGGGCTGAGATTGTTCATCGCGGAA
TCAATTTCCGCGGCAGGGGTGGAATCGTGGGGTTTGATGAGAAGTGACGA
TAGAGATACGCACGAATATGCCGATTTCCTGTTGCTTGGCTACCAAACGC
GGGAAGAGTGGCCTTGTATAGTGTAGCACCTACCGTAGCTGGTTTAGGTG
AGCCTTGTGGGGGCCTTCTGTACGAGAGGTAACTGTGATGACAAACTTCT
GTATTCCACCATGAGCAAACTTCACAAAGAAAGACCTGCGTGTCGTGATA
GTTGTGCACGATGCCAAACACATAATATTGAATCTCGTTTCTTTTCCATG
TCAAACACGTGGATCTACTGCAGCAACTTCTTGTTCGTTTGACTAGTCGT
TTGCACAACGGGCTCTACGTCATCTCCAGCCTGCCTCAACGCAAAAGCCT
GCATCCGCATCCCAAACCCAACGCCCTAGCGATTTTCGATGTTGCGCCTG
CTGCTGCTTCCCTCTCTGGAAAATGGCAGCGGCGCCGGGGTTCACTCATC
ACTCGTTCTTCGCGGAGACAGATACAACGACCGTCATAACTACCAACGTT
GCCGCTGCGCCAAGCCCAACGAGCCCGCTCTTATCTTCGAGACATTCTAG
GCGCCGCGGCAAACACAACCAGACAACACGAACCGCCGCGGTTTCCCCGG
CCGGTACCGTCGCACGACTCTTTCGGAAGAACCGTCGAATCTTGGCCGTC
GTATCCGTCGCCGTCGCGGCGTTGCTTCTGATCCTGGCGTTGACCGCTTA
CGCGGGGCTCTGGCCCTGGCGAGATCTATTTCCTTACAAAGGTGAGCGCT
GCAGCGTGAAGCACACCAATACGGCCATGATGCACCCAGAGAGAGAGAGA
GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGC
ACGCGTACACGGAGTAGCCCTTGCGGCGGGATTGTTTCGTTGTCCTTTTT
GGAGGCTTGCCGCTAAACGGTCACCTGTCCGGTAGGGCTCTTGCTCGGCC
CGTGTTGAGATTCCCCCAGAAGGAGATGAAGGGAATACAATACGGTGTAT
GACGACGGTGTATAATGTTCGGTTGACAAGGGAGTGCCCCGTGGCTGGCC
AAGCTGCCGTGTTGAGTTGTACGATTTGTAGTTTTAGTCGTGGGGTGTTT
CCTACAGTAGGTAAACTCTCTTTCTCCCTGTCTTACATAGTCGGAAACTG
TTGCACACGACCGATATCCGGCCTACAACAACGTCCACAATCAACTTTCT
TTCGAGCAAACGGAGGACAAGCGTGCGGTGCCACGAGTGCTTGGACAGTA
AGTTGGATCGAGCCCAGCAAGGTCGGAGTCAGGGGGACAGTTTTGTCGGT
TCCTGTTTTTTTCCCGCGCGTTAGGCATGTCTGTCGTCGGACCAACGCCG
TACTACCGACTCTCTTGTCAAATCTCCTGTGCGGGAACACACAAAGAAGA
AGTCCAGCATCAGACTTTGCGCCCTTGACCGCTAGACAAAAGGTTTATCT
GTCCACACAGTAGAGTACCGGACCCGATTCCCGCGCAACTCCTTCTGATT
GCCACCTCCGCCAGGTACAACCGACCAACACTTCCTCATATCCCTGCCTG
CCTACTTCTATGTTGGTCACCTTCGTTTTGCGCTCTGTTGTTCACGTGTT
TCCTGTCAACTTTGGTCGAAATACGAAAGGCGAACTTTTTCAGCCCGCGA
AAGACTGCCTGATGGTCAATACGAGGGCTGAAGTAGCTTGCGGTAGCCCT
TGGTCAGCTCCGTGCTTTGACCTCAGCCGTTGTCGCAACGGCGGCGGCGA
CTTGCTGTCCGTCTACGTGCACGATGAGACGTGCTCCATGAGGACGAGCT
CGGAGATCATGGCCAGCTACGGGGATGTGGCCGTTCCGCCACCGTGGGAC
GCGACGGCGGAGACCCAACTGTGGAACGCGGCGGCGAAGACCCTTCGTCA
TGCCGCGGCCGAGAGGTACGGATAGAAGAAACAACGCGCGGGGGGGATGG
TTCGAAGCAGTTGACGTGCAGACAGAGAACGTCGTAAGTTCGTCACACGG
CCTCTTCGTTGGGAGAGTAGTCGGTGTGACCCAGCCCGTCGAAAATATCC
TGAGACGAGCGCGCACAATCTATTCTTGTGCTTTTCTTTTTGTGGTGTGT
TTCTTGCATTCAGTGCCTAGCAAGCCAGCTCACCAATAGAGCGGACCAAG
AGTGCTACACTTTGGACCCAAAAAGGGGGGCGGGGGTTGAACTCAAGCAT
GAGGAACATGCAAGACGAGAGGAAACGTACTTTCAGTACTTGGGGAAAAC
CGTGACAAAGCAAGATTGGGGCCATGTGCTGGAAGGTGCAAGTGACTCTC
GAAGCGATTCACGGAATCAACATTTGTGTCGACCTGTGGCCGGTGGGAGT
AGAAAAAGATGAGGCTCTCACCTCGACGTGCGGTGCTTTGCTTTTTGGCT
CTCATCTGTGTGCCTCCTTGGTTGGGTAACAGCGCTTCAGGGCGGGAAGG
GGAGAGAGACACACAGCGAGAGAGAGAAAGAAAGAGAGGGAGAGGGAGAG
AGAGAGAAGGAGTGAGACGGAGAGACAGGCAGGGAGCTGCTGTGCTTCCG
GCTGCAAATCGTACCAAAGCCGTCCTCCTCAGTAATTACTTATTTTTCCC
ACCGTCGAGAAATCGAGCTGACAACAATATTGGTCTGGTCAAGAATTACA
GTACACCGCCCGTCCACTTGGTAATCTATTTACCGCCCTATCCGAACGGG
TTGGGATGCTTCTCACGGCGAGCAAGCATGTTCTCGGTAGTGCTAGCATT
CCTGATACTACTCGAATTTTGAACTAAACCAATCCAATGAACAAGATTGC
CCAAGAGATAATTATTTATATTGTGCTGTTTTATTTCAAGAATACTCTTT
GTACAATGAGCCAAAGGGTACCAGTCCTACCGGATGCACACCGGACACAT
TAGAACGGAGTGCCTTGCGTTTACACAATCCCGTACCTCGAGAAACAAGC
CACGGATGCCTTGACTGTGCAAACCGGAACGGACGGCAAACAGGGGCCTG
CTCGTGGACACCCCCGATGAAGCGTGCATCGTCTTCTACGCGGTACCTAG
AGACAAAGGGGAGTGCGTGTCGAAGACGCCGACCTGGGGGGGGGGACAAA
ACCACGCCTTGCTGGATTTGAACGACGAGAGCCGGTGAGAGACCGACCGA
GATAGCAGAAATCCCCAACGAGCAATATGAGACAGCGTGTGTGCGGGCAT
CTGCCGTGTGGTTTGATCGGCGTGGCAGAAGCCGCTTCGTCGGCTGATTC
CGCTGAAGGGTACATGGGCCAGCCACCAGTTTACGTAGCGTTACACCTTC
GCATTTTTTTTGTCGTTGTAACATCAGAATCCCCCCCGGCCCCCCGTGCG
CGAAGAGCTCATACAGCTGCAACACTATTTACGGAATGAAGCGCGTATAT
GTGCGAAACTGACTTGAGCACACCTATTGACCGACGGCCGCGTCGGGTGT
AGTAGCGTGTGGGGCGAGATGGGCCGTGTTCACCTCGCCAAGAAATCACC
CTGCCGCGCGAATGCCGCACGACTCTGCATCGTTTACTCCAGGGTCAGAC
GGCGAAGACAGCAACTCCGTGTTATCACGGCTGCCCTGTCAGCTCCCCAC
CCCCCGCGCTGCCAGCCGGCGTAGCTCTAGCATTTTTTGTAGGCCTCGTC
TCGGTCTGTTTCAGTTGGGGTGTTGTTGACGTTTTGTATGGCTCTCCACC
CGCGAGTGCTGATCGTTATGGACAGAGGCAGGGGGGCTCTTCCTTTTCGT
TTTGATATCTCCGCTATGGGGGACAAGAAAGCACACTATTCAGGGTGCCT
CGATGTCGGAGTACCCACTATTTACTGCGGCGGTTGTGGCTTGGACTGCT
GAACTCGCCGACACTGATGGGTGGCGTGTTTGAGGTTGTAAAGTAAGAGT
ACCAAGCAAGCAAGGGTAGCACCAGTGAAGATAGATTCCCCTGGCGCTAA
TCACACGAAGACGAAGACACAGCTTAATTCCCAGCCTACGACGTGCTAAT
ATAGCTAAACATGACGGGTGAGCGCGATCTTTCCCTCAACTCGAGTACCA
TATGACCTATATCTCTCCGGGGATGATTCGACGGTCAAATCGTGCGCTCA
TGCTTTCAACCGGTGGGGTCCAGTGCGGCGCGACGCTCCCTGGACGGGAA
GGCGATGTTCCTGCAGTCCAACATGCGGCCTTGCTACTACCGCCATGGAT
ACGACATCGCGATGCCCCTCCCGGCACGCAGGCCCGTCGAACGTCTCAGG
GAGGTTGCCCCACAGGACCGAAAGTACTTCGCCACCTTCAAGGCGAGCTA
AGATTTCTGCCTTTGGTTGGGAGAATACTGGGTATTGGTTATCGCGTTTA
TGTCCAACAACAAGAGTGGGAAGGTTAAGATTGGTCCTTGGGAGAATTGA
ACGTTGTTCGGGTTGTCTTTTTTTTGAGACTAGGAAATCCTACTTTCTAG
GCCACTACACCATGGCCTCCGGTTTAACATGGGCGGGCTCTTCATCCTGT
TGAGGCCGCATGTTGGTTGGGTACGTGTGGCTCAGTTTGCCAGAATGTTT
TCCCGCCAAGGTGATCGTAGACAAGGGTCTGAAACGGACTGTGAACGAAG
CTTCCCAACGTCGAGAAAAACAGACAATTTTGCGCGGAAAAAAAATAGTG
TCGTGTACATCACCCCCAGTCGGCAGGCACACCCGTGAGCGTGCACGCTC
CATATATTTTTTCCATGCCACAGGAAGCCCCCGCACTAAACATTGCATGT
CAAGCGCTTCCTGCCAGGCAGCAGTACCGCAACTTGCGCGAGCCGTCGCG
TGTCACCGGTTTCGCACGCTGGATGTCCCGACGACACCCCGGGTGGAGCA
CTGAATATACAATACCCTCGACGCAACAGCAAGAGCCCTCTCGAGTATTC
TACGTTTGGTGACATATTTGTTCGCCTACCTCCGTTTGCAGCGTGTCAAT
AGTTTGCTCTACATCACCTCGTTCCGCCTGAACCGCTGCGCCCTCCAACG
TCATTGCTAAGACTAGCGACGCCAAGCAAGCAGAGACAGGAGTTTCGTTC
ACAAGTCTTGCTCAATCCCACCAATACCGCACCGAACAAGACCCCCCATC
CCCTCGCGCACACGTATCACACTTCAGGGCAAGCTGTATCTGAGTGGGAA
CGGCTTGTTGGAGCGGAGCGCGGTGCTTGACCTCATGAGCGGGGGGGCCT
CAGCCGCCGCAGCCGCGGCCGAAGGGCGCGGTGAGATGGGGGGCGCGAAC
GGCGACAGTCATTCGTCTTCCTCTCCCGACGTGTTGGTGGTCGAGCGGTG
CTGCAACTTCCACAGCGAGCAGGTGTGAGCTGTAGTGCTGCTGTAGTACT
TCGTCGCCTACCACGCGTTGAAGGGAATTCCTTCGTTCACCGCGGCCGGA
ACGAGTGTGAGGGCACGCGTGACTGAATGGACAATGTAGTGCGAGGACAA
TGGACATCAGTACCCACACTAGTAACCAACCACCACTTTGTGATCACACG
GAAGCTCGTGCATGGCATTCTTCATCCGAAGAGTACGGAAGGGGACGTAC
TGGATGGAATTCAGCACAGCTTTGTTCCGTGATACTGTAAAACACAAACG
TCTGCGACAAGGGGAACCCGCATCGATAGGTTCGTGCGGCGGAGGAGATA
CGGGATGGAGGTCAAAGCACGTTTGCATCGTGCAAAAACTAACACAGCGA
ACGCTACCCATGCCACGTGCGTTCCGATCGAATTCACCACAACGTACACA
AAGCGGCGGTGTGACAGTATGTTTCGCCTAACCCGCACGAATAGCTAAGG
TTGTGGGTGTGGTTGAATCTGAATGTTCTTTTTTTTGGGCTTGCCGGACT
AGGTTATGGATAGATACGCCACGCCAAGAAACAGTAGTTCCGCTTGAACG
TAGGTGGCCGCCTGATTTTACTTCTATTTTTCCGAATTCCGTCATGGTCC
ACATGTTCCTCGGTACGAACCACGGCCCGGAAGCGTACGAACTTGCCCTC
TGCCGCACTTTCTAACCTCTTTCACGCCCGACTCCATCTCGTTCATCGTC
AACGATCACACACACATAACCCACGACACATGTGACGGGCGAAAGTTGCT
GTCCTGGAACAAGGCCATGTGCGAGGCCTCCCAGCGGGAGTACGACAGCA
GCCCCAGTTACGGGGACCTCATGAACACCACCTTCGCGCTGCTGCCGGCC
GGCCGGTCTCCAGCGACCTACCGCCTCGCCGAGGCGTTGTCGGCGGGCGC
CCTTCCCGTCTTCATCCACCAGGTGTGTTGCCCAGAGTCACCGGGAAACA
TGGAGGTGGCGGCACAGCGCGTTGCTTGCCGAAACGTACAATACCGCTGG
GCTCACCAAGGCGCTATGGTGTAGCTGTCGGTCCTCCTCAAGGGCAGCAC
GTGCG back to topCoding sequence (CDS) from alignment at Ecto-sp8_S_contig1065:6025..17279+ >mRNA_Ecto-sp8_S_contig1065.1013.1 ID=mRNA_Ecto-sp8_S_contig1065.1013.1|Name=mRNA_Ecto-sp8_S_contig1065.1013.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=1632bp|location=Sequence derived from alignment at Ecto-sp8_S_contig1065:6025..17279+ (Ectocarpus species8 EcLAC_412)
ATGATGATTAATCCTCGAGGATGGGAAGTTCCTCAGCAGAGCCCATCCAG
CACGAGGACAAGAAGCCAGTCGCCCTCAGCTGTATTGGACGGACCACGTT
GTTGCCACCCGGAGGAACATGCTGCTGCTGATTTCTGGTGGGCGAGATCG
AGAAGAAGGGGAAGAGGGCTCGTGGAAATAGCAGGACAAGCAGGAGCAGC
AGCGGAGGACAGGCCTGAGAAAGAAGGGCAAAACTCCACCACAGGTGCGA
CGGCGCCGGGGTTCACTCATCACTCGTTCTTCGCGGAGACAGATACAACG
ACCGTCATAACTACCAACGTTGCCGCTGCGCCAAGCCCAACGAGCCCGCT
CTTATCTTCGAGACATTCTAGGCGCCGCGGCAAACACAACCAGACAACAC
GAACCGCCGCGGTTTCCCCGGCCGGTACCGTCGCACGACTCTTTCGGAAG
AACCGTCGAATCTTGGCCGTCGTATCCGTCGCCGTCGCGGCGTTGCTTCT
GATCCTGGCGTTGACCGCTTACGCGGGGCTCTGGCCCTGGCGAGATCTAT
TTCCTTACAAAGGCGAACTTTTTCAGCCCGCGAAAGACTGCCTGATGGTC
AATACGAGGGCTGAAGTAGCTTGCGGTAGCCCTTGGTCAGCTCCGTGCTT
TGACCTCAGCCGTTGTCGCAACGGCGGCGGCGACTTGCTGTCCGTCTACG
TGCACGATGAGACGTGCTCCATGAGGACGAGCTCGGAGATCATGGCCAGC
TACGGGGATGTGGCCGTTCCGCCACCGTGGGACGCGACGGCGGAGACCCA
ACTGTGGAACGCGGCGGCGAAGACCCTTCGTCATGCCGCGGCCGAGAGGG
GCCTGCTCGTGGACACCCCCGATGAAGCGTGCATCGTCTTCTACGCGGTA
CCTAGAGACAAAGGGGAGTGCGTGTCGAAGACGCCGACCTGGGGGGGGGG
ACAAAACCACGCCTTGCTGGATTTGAACGACGAGAGCCGTGCGGCGCGAC
GCTCCCTGGACGGGAAGGCGATGTTCCTGCAGTCCAACATGCGGCCTTGC
TACTACCGCCATGGATACGACATCGCGATGCCCCTCCCGGCACGCAGGCC
CGTCGAACGTCTCAGGGAGGTTGCCCCACAGGACCGAAAGTACTTCGCCA
CCTTCAAGGGCAAGCTGTATCTGAGTGGGAACGGCTTGTTGGAGCGGAGC
GCGGTGCTTGACCTCATGAGCGGGGGGGCCTCAGCCGCCGCAGCCGCGGC
CGAAGGGCGCGGTGAGATGGGGGGCGCGAACGGCGACAGTCATTCGTCTT
CCTCTCCCGACGTGTTGGTGGTCGAGCGGTGCTGCAACTTCCACAGCGAG
CAGTTGCTGTCCTGGAACAAGGCCATGTGCGAGGCCTCCCAGCGGGAGTA
CGACAGCAGCCCCAGTTACGGGGACCTCATGAACACCACCTTCGCGCTGC
TGCCGGCCGGCCGGTCTCCAGCGACCTACCGCCTCGCCGAGGCGTTGTCG
GCGGGCGCCCTTCCCGTCTTCATCCACCAGGTGTGTTGCCCAGAGTCACC
GGGAAACATGGAGGTGGCGGCACAGCGCGTTGCTTGCCGAAACGTACAAT
ACCGCTGGGCTCACCAAGGCGCTATGGTGTAG back to top
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