mRNA_Ecto-sp8_S_contig106424.1004.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig106424.1004.1 vs. uniprot
Match: A0A351C9A4_9BACT (MR_MLE domain-containing protein n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A351C9A4_9BACT) HSP 1 Score: 196 bits (497), Expect = 2.100e-58 Identity = 93/164 (56.71%), Postives = 118/164 (71.95%), Query Frame = 1
Query: 1 MKIAAVDFFPMHLEAPSDA--GTDGSKQSQLDFTPEKLAARRYKPPESVFVRLISDDGIEGYGDGATLPHYLGHGVGSMLDWLGRFREVLIGEEPRNITAIHQRMELVASIGVPGCRPAQAAIDMAIHDLVAKSFECPVYELLGGSYRNTLELQTQMHGHTIEQ 486
MKI ++++P+ L D+ GTD Q+ + E +AA+RYK PE+ + + +DDG+ G GDGATLPHYLGHG+GSM+DW+ RFR VLIG +P NI IHQ ME VA GCRPAQAAIDMAI+DL K CPV++LLGG+YR +L+LQTQMHG T EQ
Sbjct: 1 MKITNIEYYPLQLTVAGDSEIGTDEDPSRQVGASAESMAAQRYKAPETGVILIRTDDGLVGIGDGATLPHYLGHGIGSMVDWMARFRTVLIGADPLNIAGIHQLMEAVADRNPAGCRPAQAAIDMAIYDLAGKVHNCPVFDLLGGAYRTSLDLQTQMHGQTPEQ 164
BLAST of mRNA_Ecto-sp8_S_contig106424.1004.1 vs. uniprot
Match: A0A524HGK4_9BACT (Uncharacterized protein n=1 Tax=Candidatus Brocadiae bacterium TaxID=2517210 RepID=A0A524HGK4_9BACT) HSP 1 Score: 86.7 bits (213), Expect = 5.360e-19 Identity = 43/72 (59.72%), Postives = 52/72 (72.22%), Query Frame = 1
Query: 1 MKIAAVDFFPMHLE--AP-SDAGTDGSKQSQLDFTPEKLAARRYKPPESVFVRLISDDGIEGYGDGATLPHY 207
MKI +DFFP+ L AP S GTD + Q D T E LAA+RY PPE+VFVR+ +D GI+G+GDGATLPHY
Sbjct: 1 MKITTIDFFPLRLAIGAPGSPLGTDSNAMEQRDATAEVLAAQRYTPPETVFVRIRTDSGIQGFGDGATLPHY 72
BLAST of mRNA_Ecto-sp8_S_contig106424.1004.1 vs. uniprot
Match: A0A3G3K383_9BACL (MR_MLE domain-containing protein n=2 Tax=Cohnella candidum TaxID=2674991 RepID=A0A3G3K383_9BACL) HSP 1 Score: 79.0 bits (193), Expect = 2.850e-14 Identity = 44/101 (43.56%), Postives = 67/101 (66.34%), Query Frame = 1
Query: 139 VFVRLISDDGIEGYGDGATLPHYLGHGVGSMLDWLGR-FREVLIGEEPRNITAIHQRMELVASIGVPGCRPAQAAIDMAIHDLVAKSFECPVYELLGGSYR 438
V V++I++DG+ G G+ AT+P Y ++ +G+ F+ +L+G++PRNI IH M S V G R A++AID A++DL AKS+ PVY+LLGG+ R
Sbjct: 39 VIVKVITEDGMTGLGEAATIPIYDEGSQAGVVFSIGKYFKPLLVGQDPRNIGLIHDIM----SRTVKGERYAKSAIDYALYDLTAKSYGVPVYQLLGGNNR 135
BLAST of mRNA_Ecto-sp8_S_contig106424.1004.1 vs. uniprot
Match: UPI00178B6788 (dipeptide epimerase n=1 Tax=Sporosarcina limicola TaxID=34101 RepID=UPI00178B6788) HSP 1 Score: 77.4 bits (189), Expect = 1.010e-13 Identity = 52/146 (35.62%), Postives = 72/146 (49.32%), Query Frame = 1
Query: 1 MKIAAVDFFPMHLEAPSDAGTDGSKQSQLDFTPEKLAARRYKPPESVFVRLISDDGIEGYGDGATLPHYLGHGVGSMLDWL-GRFREVLIGEEPRNITAIHQRMELVASIGVPGCRPAQAAIDMAIHDLVAKSFECPVYELLGGSY 435
MKI+ ++ + +HL + P ++ Y S+ V++I+D G GYG+G H G S L VLIGE PRN+ IH M+ GVP A+AAID+A +D+V KS PVY+LLGG Y
Sbjct: 1 MKISEIEIYAIHLPL---------------YEPFIISYATYDYMPSIIVKIITDSGHVGYGEGVADEHVTGESWESTFAILKNTLAPVLIGENPRNMERIHNLMDATI-YGVP---TAKAAIDIACYDVVGKSLGVPVYDLLGGRY 127
BLAST of mRNA_Ecto-sp8_S_contig106424.1004.1 vs. uniprot
Match: UPI001FAC4A58 (dipeptide epimerase n=1 Tax=Bacillus sp. FJAT-47783 TaxID=2922712 RepID=UPI001FAC4A58) HSP 1 Score: 77.0 bits (188), Expect = 1.370e-13 Identity = 45/122 (36.89%), Postives = 67/122 (54.92%), Query Frame = 1
Query: 91 FTPEKLAARRYKPPESVFVRLISDDGIEGYGDGATLPHYLGHGVGSMLDWLGRF-REVLIGEEPRNITAIHQRMELVASIGVPGCRPAQAAIDMAIHDLVAKSFECPVYELLGGSYRNTLEL 453
TP ++ Y S+ V++ +DDG+ GYG+G H G S + + LIGE P NI IH++M + G A+AAID+A +DL+ K+ PVY LLGG YR++L++
Sbjct: 16 ITPFIVSYHTYNDMPSIIVKIETDDGLIGYGEGTPDEHVTGEEWKSTYEMIKNILAPELIGENPFNIEKIHEKMNKK----IYGAPTAKAAIDIACYDLMGKAANQPVYNLLGGKYRDSLKI 133
BLAST of mRNA_Ecto-sp8_S_contig106424.1004.1 vs. uniprot
Match: A0A359KN06_9CHLR (Dipeptide epimerase (Fragment) n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A359KN06_9CHLR) HSP 1 Score: 73.9 bits (180), Expect = 3.240e-13 Identity = 43/107 (40.19%), Postives = 61/107 (57.01%), Query Frame = 1
Query: 133 ESVFVRLISDDGIEGYGDGATLPHYLGHGVGSMLDWLGRFREVLIGEEPRNITAIHQRMELVASIGVPGCRPAQAAIDMAIHDLVAKSFECPVYELLGGSYRNTLEL 453
ESV VRL +DDG G+G+G PH G G +L+ L L+G +P + TA+ ++ S G A+AAID+A+HDLV ++ PV+ LLGG R L +
Sbjct: 30 ESVLVRLETDDGTTGWGEGTPDPHVTGETFGGVLETLRLLAPTLLGRDPLDRTALISDLDRRIS----GNPTAKAAIDIALHDLVGRATGLPVWALLGGRSRTHLTI 132
BLAST of mRNA_Ecto-sp8_S_contig106424.1004.1 vs. uniprot
Match: T1CH05_9ZZZZ (Mandelate racemase/muconate lactonizing enzyme family protein (Fragment) n=1 Tax=mine drainage metagenome TaxID=410659 RepID=T1CH05_9ZZZZ) HSP 1 Score: 73.6 bits (179), Expect = 3.790e-13 Identity = 43/127 (33.86%), Postives = 76/127 (59.84%), Query Frame = 1
Query: 73 KQSQLDFT-PEKLAARRYKPPESVFVRLISDDGIEGYGDGATLPHYLGHGVGSMLDWLGRFREVLIGEEPRNITAIHQRMELVASIGVPGCRPAQAAIDMAIHDLVAKSFECPVYELLGGSYRNTLE 450
K+ +D P K+A E FV+++SD G+EGYG+ P G +GS+ L FR+ L G E + A+++RM+ +A + ++AA+DMA++D++ K + P+Y++LGG YR++++
Sbjct: 9 KKINIDMKKPFKIALGSTDFYEGYFVKVVSDSGLEGYGEAIPTPFITGDTMGSVEAELSIFRQALKGSE-LSTEAVNERMKALAR----SSKASRAAVDMALYDILGKKADLPLYQILGG-YRSSMK 129
BLAST of mRNA_Ecto-sp8_S_contig106424.1004.1 vs. uniprot
Match: A0A0J1GAZ1_9FIRM (Dipeptide epimerase n=4 Tax=Robinsoniella TaxID=588605 RepID=A0A0J1GAZ1_9FIRM) HSP 1 Score: 75.5 bits (184), Expect = 4.620e-13 Identity = 41/99 (41.41%), Postives = 60/99 (60.61%), Query Frame = 1
Query: 133 ESVFVRLISDDGIEGYGDGATLPHYLGHGVGSMLDWLGRFREVLIGEEPRNITAIHQRMELVASIGVPGCRPAQAAIDMAIHDLVAKSFECPVYELLGG 429
E+V V++I+DDGI GYG+ A L G + ++ L FR+ LIGE+P NI IH M + + G A+ AID+A++D+ K PVY++LGG
Sbjct: 30 ENVLVKIITDDGIAGYGEAAPLAFVTGETIEGVIAALQMFRQGLIGEDPLNIERIHALM----NGAIAGNTSAKCAIDLALYDIRGKVMGQPVYKVLGG 124
BLAST of mRNA_Ecto-sp8_S_contig106424.1004.1 vs. uniprot
Match: UPI001557F55B (dipeptide epimerase n=2 Tax=Sporosarcina TaxID=1569 RepID=UPI001557F55B) HSP 1 Score: 74.7 bits (182), Expect = 9.280e-13 Identity = 49/152 (32.24%), Postives = 74/152 (48.68%), Query Frame = 1
Query: 1 MKIAAVDFFPMHLEAPSDAGTDGSKQSQLDFTPEKLAARRYKPPESVFVRLISDDGIEGYGDGATLPHYLGHGVGSMLDWL-GRFREVLIGEEPRNITAIHQRMELVASIGVPGCRPAQAAIDMAIHDLVAKSFECPVYELLGGSYRNTLEL 453
MKI+ ++ + +HL + P ++ Y S+ V+L +D G+ GYG+G H G S L L+GE P+NI IH+ M+ V GVP A+AAID+A +D+V K+ PVY+L+GG + L
Sbjct: 1 MKISQIEIYAIHLPL---------------YEPFVISYATYDYMPSIIVKLTTDSGLVGYGEGVADEHVTGESWESTFAILKNTIAPKLLGENPKNIERIHELMDSVI-YGVP---TAKAAIDIACYDVVGKALGVPVYDLIGGRFHKEFPL 133
BLAST of mRNA_Ecto-sp8_S_contig106424.1004.1 vs. uniprot
Match: A0A1V5C509_9DELT (L-Ala-D/L-Glu epimerase n=1 Tax=Syntrophorhabdus sp. PtaU1.Bin050 TaxID=1811703 RepID=A0A1V5C509_9DELT) HSP 1 Score: 74.7 bits (182), Expect = 9.990e-13 Identity = 41/114 (35.96%), Postives = 69/114 (60.53%), Query Frame = 1
Query: 133 ESVFVRLISDDGIEGYGDGATL-PHYLGHGVGSMLDWLGR--FREVLIGEEPRNITAIHQRMELVASIGVPGCRPAQAAIDMAIHDLVAKSFECPVYELLGGSYRNTLELQTQM 465
+ V ++L +D+GI G G+G+TL P Y G +++ +G F +VL G++P NI IH+ M+ V V A++AID A+HD++ K+ PVY L+GG + + + L+ +
Sbjct: 31 DDVVIKLYTDEGITGLGEGSTLGPFYCGESQETVMGIIGHHLFPKVLDGKDPFNIDLIHRHMDKV----VYENSVAKSAIDFALHDIMGKALNVPVYRLIGGKFTDRIPLRASV 140 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig106424.1004.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig106424.1004.1 >prot_Ecto-sp8_S_contig106424.1004.1 ID=prot_Ecto-sp8_S_contig106424.1004.1|Name=mRNA_Ecto-sp8_S_contig106424.1004.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=162bp MKIAAVDFFPMHLEAPSDAGTDGSKQSQLDFTPEKLAARRYKPPESVFVRback to top mRNA from alignment at Ecto-sp8_S_contig106424:3..488- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig106424.1004.1 ID=mRNA_Ecto-sp8_S_contig106424.1004.1|Name=mRNA_Ecto-sp8_S_contig106424.1004.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=486bp|location=Sequence derived from alignment at Ecto-sp8_S_contig106424:3..488- (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig106424:3..488- >mRNA_Ecto-sp8_S_contig106424.1004.1 ID=mRNA_Ecto-sp8_S_contig106424.1004.1|Name=mRNA_Ecto-sp8_S_contig106424.1004.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=486bp|location=Sequence derived from alignment at Ecto-sp8_S_contig106424:3..488- (Ectocarpus species8 EcLAC_412)back to top |