mRNA_Ecto-sp8_S_contig10633.995.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig10633.995.1 vs. uniprot
Match: D8LCJ7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCJ7_ECTSI) HSP 1 Score: 690 bits (1780), Expect = 6.920e-243 Identity = 357/381 (93.70%), Postives = 364/381 (95.54%), Query Frame = 3
Query: 132 CMDLSRWAPANETNAGKGVAEEDRESRGGPSALKSSTVNIDKGHAAGEAESGWDLKMGNDARDDLASLWGGGGSNNLSPLTVAPSRSPFRRRASDTALERVAGPALTKTAVSPLTVQAPPTARRTRSEDGLKNSTSESDLSLLLPNRNRPEQTHRAPWGGGDEDHDTAVAMKWEIGEGDVGGDASAAPRAYGNGLNDNSSSVAASARETGDREKGPSERRAESAVNVITVESLREEFDFDGRSYQPDNPPKDSPFASVFSVPCSDEEQYLAFTGLGHTGQPLRMLTARVQFSVNSERTAESVVGPLQAGGNGRVYGALRYPSMSELWPEICSTSAVRVVQVETLVDIRSRQGDFLFLGNGPKVTYRQAQVHSSRKGASWRP 1274
CMDLSRWAPANETNAGKGVAEEDR SRGGPSALKSS VNID+GHAAGEAESGW+LKMGNDARDDLA LWGGGGSNNLSPL VAP RSPFRRRASDTAL+RVAGPALTKTAVSPLTVQAPP ARRTRSEDGLK+STSESDLSLLLPNRNRPEQTHRAPW G DEDHDTA MKWE+GEGDVG DASAAPR GNGL+DNSSSVAASARETGDREKGPSERRAESA NVI VESLREEFDFDGRSYQPDNPPKDSPFASVFSVPCSDE QYLAFTGLGHTGQPLRMLTARVQFSVNSERTAESVVGPLQAGGNGRVYGALRYPSMSELWPEICSTSAVRVVQV+TLVDIRSRQGDFLFLGNGPKVTYRQAQVHSSRKGASW P
Sbjct: 241 CMDLSRWAPANETNAGKGVAEEDRGSRGGPSALKSSAVNIDQGHAAGEAESGWNLKMGNDARDDLAGLWGGGGSNNLSPLIVAPPRSPFRRRASDTALDRVAGPALTKTAVSPLTVQAPPAARRTRSEDGLKDSTSESDLSLLLPNRNRPEQTHRAPWSGCDEDHDTA--MKWEMGEGDVGSDASAAPRGCGNGLSDNSSSVAASARETGDREKGPSERRAESAANVIAVESLREEFDFDGRSYQPDNPPKDSPFASVFSVPCSDEAQYLAFTGLGHTGQPLRMLTARVQFSVNSERTAESVVGPLQAGGNGRVYGALRYPSMSELWPEICSTSAVRVVQVDTLVDIRSRQGDFLFLGNGPKVTYRQAQVHSSRKGASWGP 619
BLAST of mRNA_Ecto-sp8_S_contig10633.995.1 vs. uniprot
Match: A0A6H5JPU4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPU4_9PHAE) HSP 1 Score: 558 bits (1437), Expect = 6.500e-191 Identity = 299/350 (85.43%), Postives = 311/350 (88.86%), Query Frame = 3
Query: 132 CMDLSRWAPANETNAGKGVAEEDRESRGGPSALKSSTVNIDKGHAAGEAESGWDLKMGNDARDDLASLWGGGGSNNLSPLTVAPSRSPFRRRASDTALERVAGPALTKTAVSPLTVQAPPTARRTRSEDGLKNSTSESDLSLLLPNRNRPEQTHRAPWGGGDEDHDTAVAMKWEIGEGDVGGDASAAPRAYGNGLNDNSSSVAASARETGDREKGPSERRAESAVNVITVESLRE--------EFDFDGRSYQPDNPPKDSPFASVFSVPCSDEEQYLAFTGLGHTGQPLRMLTARVQFSVNSERTAESVVGPLQAGGNGRVYGALRYPSMSELWPEICSTSAVRVVQVE 1157
CMDLSRW PANETN GKGVAEEDRESRGGPSALKSSTV ID+GHAA EAESGW+LKMGNDARD+LASLW GGGSNNLSPL VAP RSPFRRRASDTALERVAGPALTK AVSPLTVQAPPTARRTRS +GLK STSESDL LLLPNRNRPEQTHRAPW G D+DHD +AMK++IGEG V DASAAPR YGNGL D ++VAASARETG+REKGPSERRAESA+NVITVESLRE EFDFDGRSYQPDN KDSPFASVFSVPCSDEEQYLAFTGLGHTGQPLRMLTARVQFSVNSE TAESV AGGNGRVYGALRYPSMSELWPEIC TSAVRVVQVE
Sbjct: 275 CMDLSRWVPANETNGGKGVAEEDRESRGGPSALKSSTVTIDQGHAADEAESGWNLKMGNDARDELASLWEGGGSNNLSPLIVAPPRSPFRRRASDTALERVAGPALTKAAVSPLTVQAPPTARRTRSAEGLKGSTSESDLRLLLPNRNRPEQTHRAPWSGRDKDHD--IAMKFDIGEGGVRSDASAAPRGYGNGLGDKGAAVAASARETGEREKGPSERRAESAINVITVESLREVRTSRRKQEFDFDGRSYQPDNLAKDSPFASVFSVPCSDEEQYLAFTGLGHTGQPLRMLTARVQFSVNSEHTAESV-----AGGNGRVYGALRYPSMSELWPEICRTSAVRVVQVE 617
BLAST of mRNA_Ecto-sp8_S_contig10633.995.1 vs. uniprot
Match: A0A6H5JZ42_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ42_9PHAE) HSP 1 Score: 200 bits (508), Expect = 1.390e-54 Identity = 155/372 (41.67%), Postives = 200/372 (53.76%), Query Frame = 3
Query: 276 AESGWDLKMGNDARDDLASLWGGGGSNNLSPLTVAP----------------SRSPFRRRASDTALERVAGPALT-KTAVSPLTVQAPPTAR-RTRSE-DGLKNSTSE-SDLSLLLP-----NRNR-----PEQTHRAPWGGGDEDHDTAVAMKWEIGE---GDVGGDASAAPRAYGNGLNDNSSSVAASAR----ETGDREKGPSERRAESAVNVITVESLREEFDFDGRSYQPDNPPKDSPFASVFSVPCSDEEQYLAFTGLGHTGQPLRMLTARVQFSVNSERTAESVVGPLQA--GGNGRVYGALRYPSMSELWPEICSTSAVRVVQVETLVDIRSRQGDFLFLGNGPKVTYRQAQVHSSRKGASWRP 1274
A+S WD+ +G+ D GG NLSPLTV P S SP RR SD + RVA L +SPLTVQAPP R R R E K E D S++ P + N+ P + PW D W G+ G GG G GL + ++ AA++ + REK S R ++ V+ + +ESLRE+FDF+GR+ +P N P SPFA+ SVP SD+EQYL F GLG TG+PL L AR QFS N R AE +VGPLQA G NGRVYGA++YPSM+ELWPE+ ++ A+RVV+V+ LV++RSR GD L+L YR+ S +GA WRP
Sbjct: 80 AKSWWDVDLGDGGGDSTKKGARGG---NLSPLTVTPPXXXXXXXXXXLSLPPSLSPVRRM-SDAGVVRVASTTLMGDLKLSPLTVQAPPNNRHRQRCELYAAKRPVVEVHDSSIVSPAGSSSSSNKIGGEDPNVMRQPPWREDD----------WLAGDLLGGVRGGGVKVPAPLCGPGLGASETAPAAASASGVSKKEQREKESSRRASKPTVDNVFIESLREDFDFEGRTIEP-NKPSGSPFAAALSVPRSDDEQYLVFIGLGETGRPLPALAARAQFSANPGRQAERMVGPLQARAGSNGRVYGAVQYPSMAELWPEVYNSKAIRVVKVDMLVEVRSRSGDSLYLATELMAMYRRPSGGSRNQGALWRP 436
BLAST of mRNA_Ecto-sp8_S_contig10633.995.1 vs. uniprot
Match: D8LCL1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCL1_ECTSI) HSP 1 Score: 177 bits (450), Expect = 3.950e-47 Identity = 87/147 (59.18%), Postives = 111/147 (75.51%), Query Frame = 3
Query: 834 EEFDFDGRSYQPDNPPKDSPFASVFSVPCSDEEQYLAFTGLGHTGQPLRMLTARVQFSVNSERTAESVVGPLQAGGNGRVYGALRYPSMSELWPEICSTSAVRVVQVETLVDIRSRQGDFLFLGNGPKVTYRQAQVHSSRKGASWRP 1274
E+FDF+GR+ +P N P DSPFA+ FSVP SD+EQ+L F GLG TG+PL L AR QFS N R AE +VGPLQAG NGRVYGA++YPSM+ELWPE+ +++A+RVV+V+ LV++RSR GD L+L K YR+ S +GA WRP
Sbjct: 207 EDFDFEGRTIEP-NKPSDSPFAAAFSVPRSDDEQHLVFIGLGETGRPLPTLAARAQFSANPGRKAERMVGPLQAGSNGRVYGAVQYPSMAELWPEVYNSTAIRVVKVDMLVEVRSRYGDSLYLATELKAMYRRPPGGSRNQGALWRP 352
BLAST of mRNA_Ecto-sp8_S_contig10633.995.1 vs. uniprot
Match: D7FZ48_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZ48_ECTSI) HSP 1 Score: 118 bits (296), Expect = 1.510e-24 Identity = 64/158 (40.51%), Postives = 90/158 (56.96%), Query Frame = 3
Query: 804 VNVITVESLREEFDFDGRSYQPDNPPKDSPFASVFSVPCSDEEQ-YLAFTGLGHTGQPLRMLTARVQFSVNSERTAESVVGPLQAGGNGRVYGALRYPSMSELWPEICSTSAVRVVQVETLVDIRSRQGDFLFLGNGPKVTYRQAQVHSSRKGASWRP 1274
+ + +E R E DF+GR P +P P +P S + Q +L FTGL +TGQ LR L F V+S V P+Q G NGR Y + YPSM E+WPE+ STS +RVV+V+ +V+IRS G++ ++G KVTY +A + A+ RP
Sbjct: 372 MEKVVIEPSRNECDFEGRPTPPTDPKSGEP-----PIPSSTDRQCHLVFTGLNNTGQDLRSLRVTAHFGVDSVHKVGKVTSPIQLGSNGRAYAGVFYPSMQEIWPELYSTSNIRVVEVDLVVEIRSDSGEYQYVGPQLKVTYLRAAPPADAAEATPRP 524
BLAST of mRNA_Ecto-sp8_S_contig10633.995.1 vs. uniprot
Match: D7G8W7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8W7_ECTSI) HSP 1 Score: 97.1 bits (240), Expect = 6.430e-20 Identity = 46/75 (61.33%), Postives = 57/75 (76.00%), Query Frame = 3
Query: 1050 QAGGNGRVYGALRYPSMSELWPEICSTSAVRVVQVETLVDIRSRQGDFLFLGNGPKVTYRQAQVHSSRKGASWRP 1274
+AG NGRVYG ++ PSM +LWPE+ S +AVRVVQV+ V+IRSR GDFL L + KV YR+ Q H S +GASWRP
Sbjct: 86 EAGPNGRVYGGVQCPSMKDLWPEVYSAAAVRVVQVDLRVEIRSRSGDFLHLDSELKVIYRRPQDHGSSEGASWRP 160
BLAST of mRNA_Ecto-sp8_S_contig10633.995.1 vs. uniprot
Match: D7G6J1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6J1_ECTSI) HSP 1 Score: 94.0 bits (232), Expect = 6.290e-19 Identity = 48/104 (46.15%), Postives = 63/104 (60.58%), Query Frame = 3
Query: 930 EQYLAFTGLGHTGQPLRMLTARVQFSVNSERTAESVVGPLQAGGNGRVYGALRYPSMSELWPEICSTSAVRVVQVETLVDIRSRQGDFLFLGNGPKVTYRQAQV 1241
EQ+L FTGL G L LT V FS+NS R GP+Q G + RVY A++YP+M+ELWPEI AV VVQV+ + +RS + G KVTYR+ ++
Sbjct: 35 EQHLVFTGLVGAGPHLDYLTTTVYFSINSGRPLARAAGPMQVGEDERVYVAVKYPTMNELWPEIYQNVAVEVVQVDVFITVRSGHKTIRYPGTELKVTYRRTRM 138
BLAST of mRNA_Ecto-sp8_S_contig10633.995.1 vs. uniprot
Match: A0A6H5L3B8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3B8_9PHAE) HSP 1 Score: 77.8 bits (190), Expect = 1.810e-13 Identity = 48/111 (43.24%), Postives = 59/111 (53.15%), Query Frame = 3
Query: 843 DFDGRSY-QPDNPPKDSPFASVFSVPCSDEEQYLAFTGLGHTGQPLRMLTARVQFSVNSERTAESVVGPLQAGGNGRVYGALRYPSMSELWPEICSTSAVRVVQVETLVDI 1172
DF GR+ P S A+ F EQ+L FTGL G L LT V FS+NS R GP+Q G + RVY A+++P+M+ELWPEI AV VVQV I
Sbjct: 16 DFHGRAVAHPQESVDSSALAACFMS--GSLEQHLVFTGLVGAGPDLDYLTTTVYFSINSGRPLARAAGPMQVGEDERVYVAVKFPTMNELWPEIYQNVAVEVVQVRLFPSI 124
BLAST of mRNA_Ecto-sp8_S_contig10633.995.1 vs. uniprot
Match: A0A6H5L4C2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4C2_9PHAE) HSP 1 Score: 73.6 bits (179), Expect = 3.020e-12 Identity = 37/81 (45.68%), Postives = 51/81 (62.96%), Query Frame = 3
Query: 930 EQYLAFTGLGHTGQPLRMLTARVQFSVNSERTAESVVGPLQAGGNGRVYGALRYPSMSELWPEICSTSAVRVVQVETLVDI 1172
EQ+L FT L G L LT V FS+ + + E GP+Q +GRVY A++ PS+SELWPEI + ++RVVQV+ V +
Sbjct: 31 EQHLVFTELDGAGPHLAHLTPTVHFSITAGHSLERAGGPMQVRKDGRVYVAVKCPSISELWPEIYNNRSIRVVQVDVYVTV 111
BLAST of mRNA_Ecto-sp8_S_contig10633.995.1 vs. uniprot
Match: D7G6J2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6J2_ECTSI) HSP 1 Score: 51.2 bits (121), Expect = 3.880e-5 Identity = 22/36 (61.11%), Postives = 30/36 (83.33%), Query Frame = 3
Query: 1047 LQAGGNGRVYGALRYPSMSELWPEICSTSAVRVVQV 1154
+Q G +GRVY A++YPS+SELWPEI + ++RVVQV
Sbjct: 1 MQVGQDGRVYVAVKYPSISELWPEIYNNRSIRVVQV 36 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig10633.995.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig10633.995.1 >prot_Ecto-sp8_S_contig10633.995.1 ID=prot_Ecto-sp8_S_contig10633.995.1|Name=mRNA_Ecto-sp8_S_contig10633.995.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=381bp MDLSRWAPANETNAGKGVAEEDRESRGGPSALKSSTVNIDKGHAAGEAESback to top mRNA from alignment at Ecto-sp8_S_contig10633:2637..6646- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig10633.995.1 ID=mRNA_Ecto-sp8_S_contig10633.995.1|Name=mRNA_Ecto-sp8_S_contig10633.995.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=4010bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10633:2637..6646- (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig10633:2637..6646- >mRNA_Ecto-sp8_S_contig10633.995.1 ID=mRNA_Ecto-sp8_S_contig10633.995.1|Name=mRNA_Ecto-sp8_S_contig10633.995.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=1143bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10633:2637..6646- (Ectocarpus species8 EcLAC_412)back to top |