mRNA_Ecto-sp8_S_contig10632.993.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig10632.993.1 vs. uniprot
Match: D7FYJ9_ECTSI (TPT domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYJ9_ECTSI) HSP 1 Score: 268 bits (686), Expect = 1.270e-87 Identity = 146/149 (97.99%), Postives = 147/149 (98.66%), Query Frame = 1
Query: 1 QMPPLQLLSRMAPLALVQMAAGALALGEVSSLVANWREIREGWALYGVAITGVGSFSLNFCSLQANKVTSPLTLSIMANIKQVLIVAASSVVFKDTASTLNKFGFVVVILASTRYSMLSVSERNKSREVKALIEPPEIGIGKSLPLLPK 447
+MPPLQLLSRMAPLALVQMA GALALGEVSSLVANWREIREGWALYGVAITGVGSFSLN CSLQANKVTSPLTLSIMANIKQVLIVAASSVVFKDTASTLNKFGFVVVILASTRYSMLSVSERNKSREVKALIEPPEIGIGKSLPLLPK
Sbjct: 210 KMPPLQLLSRMAPLALVQMAVGALALGEVSSLVANWREIREGWALYGVAITGVGSFSLNLCSLQANKVTSPLTLSIMANIKQVLIVAASSVVFKDTASTLNKFGFVVVILASTRYSMLSVSERNKSREVKALIEPPEIGIGKSLPLLPK 358
BLAST of mRNA_Ecto-sp8_S_contig10632.993.1 vs. uniprot
Match: A0A7S1XZK4_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XZK4_9STRA) HSP 1 Score: 109 bits (272), Expect = 8.450e-26 Identity = 58/124 (46.77%), Postives = 88/124 (70.97%), Query Frame = 1
Query: 19 LLSRMAPLALVQMAAGALALGEVSSLVANWREIREGWALYGVAITGVGSFSLNFCSLQANKVTSPLTLSIMANIKQVLIVAASSVVFKDTASTLNKFGFVVVILASTRYSMLSVSERNKSREVK 390
LLSRMAPL+ V M A+A GEV+++ W E+ +G+AL+ V +GV S SLN S ANKVTSPLTL+I +N+KQV+++ ++++F+ S+LN G VVI+ S RYS+++V E+ ++ + K
Sbjct: 201 LLSRMAPLSFVWMTLAAVATGEVAAIRERWAELSDGYALHVVVFSGVLSVSLNISSFMANKVTSPLTLTIASNVKQVVLMCFATLLFRTPVSSLNGAGMAVVIIGSARYSLVTVREKKEAAKEK 324
BLAST of mRNA_Ecto-sp8_S_contig10632.993.1 vs. uniprot
Match: A0A7S0F581_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7S0F581_9STRA) HSP 1 Score: 109 bits (272), Expect = 1.180e-25 Identity = 65/138 (47.10%), Postives = 89/138 (64.49%), Query Frame = 1
Query: 10 PLQLLSRMAPLALVQMAAGALALGEVSSLVANWREIREGWALYGVAITGVGSFSLNFCSLQANKVTSPLTLSIMANIKQVLIVAASSVVFKDTASTLNKFGFVVVILASTRYSMLSVSERNKSREVKALIEPPEIGIG 423
P+ LL MAPLA+VQ + A GEVSS++ + + L V ++G+ SFSLN CSL ANK+TSPLTL I AN+KQVL++A S+++F STLN G VVV++ S RYS +SV E+ E K+ P ++ G
Sbjct: 199 PVDLLGHMAPLAMVQCIVLSFATGEVSSILGRPELYTDPYPLMVVLMSGLFSFSLNICSLMANKLTSPLTLCIAANVKQVLMIALSTIIFSTPISTLNGLGIVVVLMGSGRYSYVSVLEK---MEKKSTTSPDDVEAG 333
BLAST of mRNA_Ecto-sp8_S_contig10632.993.1 vs. uniprot
Match: A0A7S2W4X8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2W4X8_9STRA) HSP 1 Score: 101 bits (252), Expect = 1.430e-24 Identity = 60/135 (44.44%), Postives = 87/135 (64.44%), Query Frame = 1
Query: 1 QMPPLQLLSRMAPLALVQMAAGALALGEVSSLVANWREIREGWALYGVAITGVGSFSLNFCSLQANKVTSPLTLSIMANIKQVLIVAASSVVFKDTASTLNKFGFVVVILASTRYSMLSVSERNKSREVKALIEP 405
++PPL+LL +MAP+AL+Q + GE+ + N + W + V ++G+ SF+LN CSLQANKVTSPLTL I AN KQVL++A + +F +TLN FG ++V++AS YS++S+ ER K I P
Sbjct: 24 ELPPLELLRQMAPMALLQCLIMSFLNGELKGVNLNGITAKA-WRV--VIVSGMVSFTLNICSLQANKVTSPLTLCIAANAKQVLMIAIGTTLFNTHITTLNGFGIIIVLMASANYSLVSLKERTTKSSNKDNILP 155
BLAST of mRNA_Ecto-sp8_S_contig10632.993.1 vs. uniprot
Match: A0A7S3HSE3_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HSE3_9STRA) HSP 1 Score: 100 bits (250), Expect = 3.920e-24 Identity = 56/119 (47.06%), Postives = 79/119 (66.39%), Query Frame = 1
Query: 13 LQLLSRMAPLALVQMAAGALALGEVSSLVANWREIREGWALYGVAITGVGSFSLNFCSLQANKVTSPLTLSIMANIKQVLIVAASSVVFKDTASTLNKFGFVVVILASTRYSMLSVSER 369
+ LLS+M P+AL+ + ++ GEVS+++ W E+ A V +TGV SFSLN S ANKVTSPLTL I AN+KQVL+VA S++ F D+ LN G ++VI S RY +S++E+
Sbjct: 47 MDLLSKMCPIALILIGTVSIMSGEVSAIMGRWEELAISSAPQVVLLTGVLSFSLNVSSFIANKVTSPLTLCISANVKQVLVVAVSTLYFGDSVPLLNGLGILIVIYGSYRYGAISINEK 165
BLAST of mRNA_Ecto-sp8_S_contig10632.993.1 vs. uniprot
Match: A0A448YVT5_9STRA (TPT domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YVT5_9STRA) HSP 1 Score: 103 bits (256), Expect = 1.160e-23 Identity = 58/126 (46.03%), Postives = 82/126 (65.08%), Query Frame = 1
Query: 10 PLQLLSRMAPLALVQMAAGALALGEVSSLVANWREIREGWALYGVAITGVGSFSLNFCSLQANKVTSPLTLSIMANIKQVLIVAASSVVFKDTASTLNKFGFVVVILASTRYSMLSVSERNKSREV 387
P+ LL MAPLA+VQ + GEVSS+ A + + V ++G+ SFSLN CSL ANK+TSPLTL I AN+KQVL++ S+V+F + +N FG VVV++ S RYS +SV E+ +++
Sbjct: 154 PVDLLGHMAPLAMVQCIVLSFLTGEVSSISARPEIYNNYYPIGVVLMSGIFSFSLNICSLMANKMTSPLTLCIAANVKQVLMICISTVIFSTKITPMNGFGIVVVLMGSARYSYISVLEKQAGQKM 279
BLAST of mRNA_Ecto-sp8_S_contig10632.993.1 vs. uniprot
Match: A0A7S2VF30_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2VF30_9STRA) HSP 1 Score: 102 bits (255), Expect = 2.110e-23 Identity = 72/163 (44.17%), Postives = 98/163 (60.12%), Query Frame = 1
Query: 10 PLQLLSRMAPLALVQMAAGALALGEVSSLVANW-REIREGWALYGVAI---TGVGSFSLNFCSLQANKVTSPLTLSIMANIKQVLIVAASSVVFKDTASTLNKFGFVVVILASTRYSMLSVSERN---KSREVKA---LIEPPE-------IGIGKSLPLLPK 447
P+ LL MAPLALVQ A GE++S+ + W +E+ +Y + +GV SF+LN SLQANK+TSPLTL I AN+KQVL++A S+V+F S LN G +VV++ S RYS +SV E++ +S +VK EP E G GK L+PK
Sbjct: 152 PVDLLGHMAPLALVQCIVFAFFTGEITSIASRWEKELNPFVNIYPFLVVVGSGVASFTLNISSLQANKLTSPLTLCIAANVKQVLMIAMSTVLFNIDISPLNGAGILVVLMGSARYSYVSVMEKSAPKQSSDVKMSPKTTEPDEEKGALLPSGSGKEAELVPK 314
BLAST of mRNA_Ecto-sp8_S_contig10632.993.1 vs. uniprot
Match: A0A7S0AFC0_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AFC0_9STRA) HSP 1 Score: 101 bits (252), Expect = 3.030e-23 Identity = 61/129 (47.29%), Postives = 84/129 (65.12%), Query Frame = 1
Query: 10 PLQLLSRMAPLALVQMAAGALALGEVSSLVANW-REIREG---WALYGVAITGVGSFSLNFCSLQANKVTSPLTLSIMANIKQVLIVAASSVVFKDTASTLNKFGFVVVILASTRYSMLSVSERNKSRE 384
P+ LL MAPLA++Q + GEVSS+ W E+ + L V ++GV SFSLN CSL ANK+TSPLTL I AN+KQVL++A S+++F + LN G VVV+L STRYS + V E+ + ++
Sbjct: 115 PVDLLGHMAPLAMIQCLVLSFLSGEVSSIAQRWDTELSPKVNYFPLTVVFVSGVCSFSLNICSLMANKLTSPLTLCIAANVKQVLMIAISTIIFHIEITPLNGSGIVVVLLGSTRYSYVCVMEKQQQKQ 243
BLAST of mRNA_Ecto-sp8_S_contig10632.993.1 vs. uniprot
Match: A0A6U0HVW1_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A6U0HVW1_9STRA) HSP 1 Score: 100 bits (250), Expect = 5.550e-23 Identity = 62/137 (45.26%), Postives = 86/137 (62.77%), Query Frame = 1
Query: 10 PLQLLSRMAPLALVQMAAGALALGEVSSLVANWR-EIR---EGWALYGVAITGVGSFSLNFCSLQANKVTSPLTLSIMANIKQVLIVAASSVVFKDTASTLNKFGFVVVILASTRYSMLSVSERNKSREVKALIEPP 408
P+ LL MAPLA+VQ + GEVSS+ + W E+ + L+ V +GV SFSLN CSL ANK+TSPLTL I AN+KQVL++A S++VF + LN G VVV+ S+ YS +S++E+ ++ PP
Sbjct: 127 PVDLLGHMAPLAMVQCLVLSFVTGEVSSIASRWEAELNPFVHPYPLFIVVTSGVFSFSLNICSLMANKLTSPLTLCIAANVKQVLLIAFSTIVFGTEITFLNGMGIVVVLAGSSWYSYVSMAEKGLNKVKVQPSSPP 263
BLAST of mRNA_Ecto-sp8_S_contig10632.993.1 vs. uniprot
Match: A0A7S2EE68_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EE68_TRICV) HSP 1 Score: 101 bits (252), Expect = 1.130e-22 Identity = 61/137 (44.53%), Postives = 86/137 (62.77%), Query Frame = 1
Query: 10 PLQLLSRMAPLALVQMAAGALALGEVSSLVANW-REIREG---WALYGVAITGVGSFSLNFCSLQANKVTSPLTLSIMANIKQVLIVAASSVVFKDTASTLNKFGFVVVILASTRYSMLSVSERNKSREVKALIEPP 408
P+ LL MAPLA++Q + GE+ S+ W E+ L V ++GV SFSLN CSL ANK+TSPLTL I AN+KQVL++A S+++F+ + LN FG VVV++ S RYS +SV E+ + ++ PP
Sbjct: 208 PVDLLGHMAPLAMIQCLILSFLTGEIWSISRRWDAELNPSINPQPLSVVLLSGVFSFSLNICSLMANKLTSPLTLCIAANVKQVLMIAFSTIIFQTEITPLNGFGIVVVLVGSARYSYVSVLEKKRQDSAQSKEGPP 344 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig10632.993.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig10632.993.1 >prot_Ecto-sp8_S_contig10632.993.1 ID=prot_Ecto-sp8_S_contig10632.993.1|Name=mRNA_Ecto-sp8_S_contig10632.993.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=149bp MPPLQLLSRMAPLALVQMAAGALALGEVSSLVANWREIREGWALYGVAITback to top mRNA from alignment at Ecto-sp8_S_contig10632:5087..6565- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig10632.993.1 ID=mRNA_Ecto-sp8_S_contig10632.993.1|Name=mRNA_Ecto-sp8_S_contig10632.993.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=1479bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10632:5087..6565- (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig10632:5087..6565- >mRNA_Ecto-sp8_S_contig10632.993.1 ID=mRNA_Ecto-sp8_S_contig10632.993.1|Name=mRNA_Ecto-sp8_S_contig10632.993.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=447bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10632:5087..6565- (Ectocarpus species8 EcLAC_412)back to top |