mRNA_Ecto-sp8_S_contig106239.982.1 (mRNA) Ectocarpus species8 EcLAC_412

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp8_S_contig106239.982.1
Unique NamemRNA_Ecto-sp8_S_contig106239.982.1
TypemRNA
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Homology
BLAST of mRNA_Ecto-sp8_S_contig106239.982.1 vs. uniprot
Match: UPI000C78716A (adenylosuccinate synthetase-like n=1 Tax=Eurytemora affinis TaxID=88015 RepID=UPI000C78716A)

HSP 1 Score: 260 bits (665), Expect = 3.230e-83
Identity = 118/160 (73.75%), Postives = 138/160 (86.25%), Query Frame = 1
Query:    1 KAYTTRVGDGPFPTELTEEIGAFLQKEGREFGVTTGRPRRCGWLDIPLLRFTSQVNGYTALALTKTDILDKLDEIKIGVNYVKNGKALDHYPSGIFQFEGVEVEYITMPGWKTSIAAVRKFEDLPQNAQKYVHKIEELLGIPMRWVGVGPERESMILRPD 480
            KAYTTRVGDGPFPTEL ++ GAFLQKEG EFGVTTGRPRRCGWLDIPLLR+T+ VNGYTA+ALTK DILDKL+ I IGV+YVKNG  + +YPS  +QF+GVEV+YITMPGWKT+I   R FEDLPQ A+ YV KIE+LLG+P++W+GVG  R+SMI RPD
Sbjct:  278 KAYTTRVGDGPFPTELLDDTGAFLQKEGHEFGVTTGRPRRCGWLDIPLLRYTNTVNGYTAIALTKLDILDKLENILIGVDYVKNGSKIQYYPSSEYQFKGVEVDYITMPGWKTNITGCRAFEDLPQPAKDYVQKIEQLLGLPVKWIGVGQSRDSMIFRPD 437          
BLAST of mRNA_Ecto-sp8_S_contig106239.982.1 vs. uniprot
Match: X1WJ57_ACYPI (Adenylosuccinate synthetase n=4 Tax=Aphididae TaxID=27482 RepID=X1WJ57_ACYPI)

HSP 1 Score: 224 bits (570), Expect = 5.170e-69
Identity = 101/156 (64.74%), Postives = 126/156 (80.77%), Query Frame = 1
Query:    1 KAYTTRVGDGPFPTELTEEIGAFLQKEGREFGVTTGRPRRCGWLDIPLLRFTSQVNGYTALALTKTDILDKLDEIKIGVNYVKNGKALDHYPSGIFQFEGVEVEYITMPGWKTSIAAVRKFEDLPQNAQKYVHKIEELLGIPMRWVGVGPERESMI 468
            KAYTTRVGDGPFPTEL +++G  LQ  G E GVTT R RRCGWLDIPLL++TS VNGYT + LTK DILD  DE+KIGV Y  NGKAL++YPS +F+   VEV+Y+T+PGWKT+I+ +R F++LP+NA+K+V  I ELL +P++WVGVG  RESMI
Sbjct:  273 KAYTTRVGDGPFPTELFDDVGEKLQTIGNEIGVTTKRKRRCGWLDIPLLKYTSMVNGYTKICLTKLDILDTFDEVKIGVEYQLNGKALNYYPSSLFELSSVEVKYLTLPGWKTNISGIRHFDNLPENAKKFVFTITELLEVPVKWVGVGQGRESMI 428          
BLAST of mRNA_Ecto-sp8_S_contig106239.982.1 vs. uniprot
Match: A0A6J1S4A6_FRAOC (Adenylosuccinate synthetase n=1 Tax=Frankliniella occidentalis TaxID=133901 RepID=A0A6J1S4A6_FRAOC)

HSP 1 Score: 220 bits (561), Expect = 6.080e-69
Identity = 102/156 (65.38%), Postives = 122/156 (78.21%), Query Frame = 1
Query:    1 KAYTTRVGDGPFPTELTEEIGAFLQKEGREFGVTTGRPRRCGWLDIPLLRFTSQVNGYTALALTKTDILDKLDEIKIGVNYVKNGKALDHYPSGIFQFEGVEVEYITMPGWKTSIAAVRKFEDLPQNAQKYVHKIEELLGIPMRWVGVGPERESMI 468
            KAYTTRVGDGPF TELT++IGA LQ  G E GVTT RPRRCGWLDIPLL+ T+ VNGYT L +TK DILD L E+K+ V Y KNGK LD++PS   +   VEVEY+T+PGW TSI  VR FE LP+NA+ YV K+EEL+ +P+RW+GVG  RES+I
Sbjct:  166 KAYTTRVGDGPFMTELTDDIGALLQSRGHEIGVTTKRPRRCGWLDIPLLKHTTLVNGYTQLCVTKLDILDVLPELKVAVAYKKNGKVLDYFPSSTAELATVEVEYVTLPGWMTSIEDVRDFEQLPENAKNYVRKLEELVEVPIRWIGVGKGRESII 321          
BLAST of mRNA_Ecto-sp8_S_contig106239.982.1 vs. uniprot
Match: PURA_PARTE (Adenylosuccinate synthetase n=1 Tax=Paramecium tetraurelia TaxID=5888 RepID=PURA_PARTE)

HSP 1 Score: 218 bits (556), Expect = 6.500e-67
Identity = 98/158 (62.03%), Postives = 125/158 (79.11%), Query Frame = 1
Query:    1 KAYTTRVGDGPFPTELTEEIGAFLQKEGREFGVTTGRPRRCGWLDIPLLRFTSQVNGYTALALTKTDILDKLDEIKIGVNYVKNGKALDHYPSGIFQFEGVEVEYITMPGWKTSIAAVRKFEDLPQNAQKYVHKIEELLGIPMRWVGVGPERESMILR 474
            KAYTTRVG+GPFPTELT E G +LQK G EFG TTGRPRRCGWLDIP+LR++ Q+NG++++ LTK DIL  L+EIKIGVNY+ NGK +D+ P+ + +   VEVEYIT+ GWK  I+  + F +LP  AQ Y+ KIEELLGIP+ W+G GP+RE +IL+
Sbjct:  273 KAYTTRVGEGPFPTELTNETGKYLQKTGHEFGATTGRPRRCGWLDIPILRYSIQINGHSSINLTKLDILTGLEEIKIGVNYLLNGKVIDYIPAQLEELAQVEVEYITVKGWKQDISDCKTFSELPVEAQNYIKKIEELLGIPVSWIGNGPQREKIILK 430          
BLAST of mRNA_Ecto-sp8_S_contig106239.982.1 vs. uniprot
Match: UPI001ED8BF59 (adenylosuccinate synthetase n=1 Tax=Ischnura elegans TaxID=197161 RepID=UPI001ED8BF59)

HSP 1 Score: 218 bits (556), Expect = 1.440e-66
Identity = 102/156 (65.38%), Postives = 123/156 (78.85%), Query Frame = 1
Query:    1 KAYTTRVGDGPFPTELTEEIGAFLQKEGREFGVTTGRPRRCGWLDIPLLRFTSQVNGYTALALTKTDILDKLDEIKIGVNYVKNGKALDHYPSGIFQFEGVEVEYITMPGWKTSIAAVRKFEDLPQNAQKYVHKIEELLGIPMRWVGVGPERESMI 468
            KAYTTRVGDGPFPTEL +EIG  LQ  G E GVTT R RRCGWLDIP+L +TS VNGY+ +ALTK DILD L EIKIGV Y KNGK LD++P+   +   VEVEYIT+PGW TSI  +R++++LP+ A+ YV KIEELL +P+RW+GVG  RES+I
Sbjct:  305 KAYTTRVGDGPFPTELCDEIGETLQTRGGEIGVTTKRKRRCGWLDIPVLVYTSMVNGYSGIALTKLDILDTLSEIKIGVAYKKNGKKLDYFPANAAELGSVEVEYITLPGWMTSIEDIREYKELPEKAKNYVEKIEELLEVPVRWIGVGKGRESII 460          
BLAST of mRNA_Ecto-sp8_S_contig106239.982.1 vs. uniprot
Match: A0A1Y1JWT5_PHOPY (Adenylosuccinate synthetase n=1 Tax=Photinus pyralis TaxID=7054 RepID=A0A1Y1JWT5_PHOPY)

HSP 1 Score: 217 bits (552), Expect = 4.260e-66
Identity = 99/156 (63.46%), Postives = 120/156 (76.92%), Query Frame = 1
Query:    1 KAYTTRVGDGPFPTELTEEIGAFLQKEGREFGVTTGRPRRCGWLDIPLLRFTSQVNGYTALALTKTDILDKLDEIKIGVNYVKNGKALDHYPSGIFQFEGVEVEYITMPGWKTSIAAVRKFEDLPQNAQKYVHKIEELLGIPMRWVGVGPERESMI 468
            KAYTTRVGDGPFPTEL  E+G  LQ+ G EFGVTT R RRCGWLDIPLL++T+ VNGYTAL LTK DILD L EIK+G+ Y   G+ +D++PS I     VEVEY+TMPGW T    +R+F  LP NAQ+YV K+EELL +P++W+GVG  RES+I
Sbjct:  294 KAYTTRVGDGPFPTELDNEVGEQLQQRGHEFGVTTKRKRRCGWLDIPLLKYTNMVNGYTALCLTKLDILDTLPEIKVGIGYTLRGEKIDYFPSSISDLYMVEVEYVTMPGWLTCTENIREFNSLPANAQQYVEKLEELLEVPVKWIGVGKGRESII 449          
BLAST of mRNA_Ecto-sp8_S_contig106239.982.1 vs. uniprot
Match: A0A2S2R4Q7_9HEMI (Adenylosuccinate synthetase n=7 Tax=Aphididae TaxID=27482 RepID=A0A2S2R4Q7_9HEMI)

HSP 1 Score: 216 bits (550), Expect = 5.700e-66
Identity = 97/156 (62.18%), Postives = 122/156 (78.21%), Query Frame = 1
Query:    1 KAYTTRVGDGPFPTELTEEIGAFLQKEGREFGVTTGRPRRCGWLDIPLLRFTSQVNGYTALALTKTDILDKLDEIKIGVNYVKNGKALDHYPSGIFQFEGVEVEYITMPGWKTSIAAVRKFEDLPQNAQKYVHKIEELLGIPMRWVGVGPERESMI 468
            KAYTTRVGDGPFPTE+  E+G  LQ  G E GVTT R RRCGWLDIPLL++TS VNGYT + LTK DILD  DE+KIG+ Y  NGK L++YPS + +    EV+Y+T+PGWKT+I+ +R F+DLP+NA+K+V  I ELL +P++WVGVG  RES+I
Sbjct:  276 KAYTTRVGDGPFPTEMINEVGEKLQDIGNEIGVTTKRKRRCGWLDIPLLKYTSMVNGYTKICLTKLDILDTFDEVKIGIEYQLNGKTLNYYPSSLSELSLAEVKYLTLPGWKTNISGIRHFDDLPENARKFVFAITELLEVPVKWVGVGQGRESII 431          
BLAST of mRNA_Ecto-sp8_S_contig106239.982.1 vs. uniprot
Match: A0A1W0WXY3_HYPDU (Adenylosuccinate synthetase n=1 Tax=Hypsibius dujardini TaxID=232323 RepID=A0A1W0WXY3_HYPDU)

HSP 1 Score: 216 bits (551), Expect = 7.320e-66
Identity = 99/158 (62.66%), Postives = 125/158 (79.11%), Query Frame = 1
Query:    1 KAYTTRVGDGPFPTELTEEIGAFLQKEGREFGVTTGRPRRCGWLDIPLLRFTSQVNGYTALALTKTDILDKLDEIKIGVNYVKNGKALDHYPSGIFQFEGVEVEYITMPGWKTSIAAVRKFEDLPQNAQKYVHKIEELLGIPMRWVGVGPERESMILR 474
            KAYTTRVGDGPFPTELTEEIGA LQ+ G EFGVTT RPRRCGWLD+ ++++T  +NGY+ALA+TK DILD LDEIKIGV Y   GK LD +P+ +   + V+V+YIT+ GWK  I+A RKFEDLP+ A  Y+  +EE LG+P+RW+GVG +R+ +I R
Sbjct:  301 KAYTTRVGDGPFPTELTEEIGAGLQQRGAEFGVTTKRPRRCGWLDLVVVKYTHMLNGYSALAMTKLDILDTLDEIKIGVAYRHEGKLLDSFPAELTLLDKVQVDYITLKGWKQDISAARKFEDLPKEALNYIQVVEEQLGVPVRWIGVGKKRDDVIER 458          
BLAST of mRNA_Ecto-sp8_S_contig106239.982.1 vs. uniprot
Match: A0A139WFS9_TRICA (Adenylosuccinate synthetase n=4 Tax=Tribolium TaxID=7069 RepID=A0A139WFS9_TRICA)

HSP 1 Score: 216 bits (550), Expect = 8.920e-66
Identity = 100/156 (64.10%), Postives = 124/156 (79.49%), Query Frame = 1
Query:    1 KAYTTRVGDGPFPTELTEEIGAFLQKEGREFGVTTGRPRRCGWLDIPLLRFTSQVNGYTALALTKTDILDKLDEIKIGVNYVKNGKALDHYPSGIFQFEGVEVEYITMPGWKTSIAAVRKFEDLPQNAQKYVHKIEELLGIPMRWVGVGPERESMI 468
            KAYTTRVGDGPFPTEL ++IG  LQ+ G E GVTT R RRCGWLD+ LL++T+ VNGYTAL LTK DILD L EIK+GV Y   GK +D++PS   +   VEVEYIT+PGWKTS   VRKF DLP+NA+KYV+K+E+L+ +P++W+GVG  RES+I
Sbjct:  294 KAYTTRVGDGPFPTELRDKIGDCLQERGAEVGVTTKRKRRCGWLDVFLLQYTNIVNGYTALCLTKLDILDTLPEIKLGVGYKLKGKKIDYFPSSAAELAEVEVEYITLPGWKTSTENVRKFNDLPENAKKYVNKVEQLVNVPVKWIGVGKGRESII 449          
BLAST of mRNA_Ecto-sp8_S_contig106239.982.1 vs. uniprot
Match: A0A6P8ZZB3_THRPL (Adenylosuccinate synthetase n=1 Tax=Thrips palmi TaxID=161013 RepID=A0A6P8ZZB3_THRPL)

HSP 1 Score: 215 bits (548), Expect = 1.570e-65
Identity = 100/156 (64.10%), Postives = 122/156 (78.21%), Query Frame = 1
Query:    1 KAYTTRVGDGPFPTELTEEIGAFLQKEGREFGVTTGRPRRCGWLDIPLLRFTSQVNGYTALALTKTDILDKLDEIKIGVNYVKNGKALDHYPSGIFQFEGVEVEYITMPGWKTSIAAVRKFEDLPQNAQKYVHKIEELLGIPMRWVGVGPERESMI 468
            KAYTTRVGDGPF TEL++EIGA LQ  G E GVTT RPRRCGWLDIPLL+ T+ VNGYT L +TK DILD L E+KI V Y KNGK LD++PS   +   V+V+Y+T+PGW TSI  VR FE LP+NA+ Y+ K+EEL+ +P+RW+GVG  RES+I
Sbjct:  290 KAYTTRVGDGPFMTELSDEIGALLQSRGHEIGVTTKRPRRCGWLDIPLLKHTTLVNGYTQLCVTKLDILDVLPELKIAVAYRKNGKVLDYFPSSAAELLTVDVDYLTVPGWMTSIEDVRDFEKLPENAKNYIRKLEELVEVPIRWIGVGKGRESII 445          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig106239.982.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI000C78716A3.230e-8373.75adenylosuccinate synthetase-like n=1 Tax=Eurytemor... [more]
X1WJ57_ACYPI5.170e-6964.74Adenylosuccinate synthetase n=4 Tax=Aphididae TaxI... [more]
A0A6J1S4A6_FRAOC6.080e-6965.38Adenylosuccinate synthetase n=1 Tax=Frankliniella ... [more]
PURA_PARTE6.500e-6762.03Adenylosuccinate synthetase n=1 Tax=Paramecium tet... [more]
UPI001ED8BF591.440e-6665.38adenylosuccinate synthetase n=1 Tax=Ischnura elega... [more]
A0A1Y1JWT5_PHOPY4.260e-6663.46Adenylosuccinate synthetase n=1 Tax=Photinus pyral... [more]
A0A2S2R4Q7_9HEMI5.700e-6662.18Adenylosuccinate synthetase n=7 Tax=Aphididae TaxI... [more]
A0A1W0WXY3_HYPDU7.320e-6662.66Adenylosuccinate synthetase n=1 Tax=Hypsibius duja... [more]
A0A139WFS9_TRICA8.920e-6664.10Adenylosuccinate synthetase n=4 Tax=Tribolium TaxI... [more]
A0A6P8ZZB3_THRPL1.570e-6564.10Adenylosuccinate synthetase n=1 Tax=Thrips palmi T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig106239contigEcto-sp8_S_contig106239:21..506 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeArthropoda
Stop1
Start0
Seed ortholog score224.2
Seed ortholog evalue4.5e-56
Seed eggNOG ortholog7029.ACYPI006616-PA
Model size486
KEGG rclassRC00458,RC00459
KEGG koko:K01939
KEGG ReactionR01135
KEGG Pathwayko00230,ko00250,ko01100,map00230,map00250,map01100
KEGG ModuleM00049
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004019,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006167,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044208,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046033,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576
Exons1
EggNOG free text desc.Plays an important role in the de novo pathway and in the salvage pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP
EggNOG OGs38HVH@33154,3BCDJ@33208,3CTAB@33213,3E9Z8@33342,3SHMU@50557,41WU0@6656,COG0104@1,KOG1355@2759
EC6.3.4.4
Cds size486
COG Functional cat.F
Best tax levelParaneoptera
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681143160.0817645-CDS-Ecto-sp8_S_contig106239:20..5061681143160.0817645-CDS-Ecto-sp8_S_contig106239:20..506Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig106239 21..506 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig106239.982.1prot_Ecto-sp8_S_contig106239.982.1Ectocarpus species8 EcLAC_412polypeptideEcto-sp8_S_contig106239 21..506 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp8_S_contig106239.982.1

>prot_Ecto-sp8_S_contig106239.982.1 ID=prot_Ecto-sp8_S_contig106239.982.1|Name=mRNA_Ecto-sp8_S_contig106239.982.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=162bp
KAYTTRVGDGPFPTELTEEIGAFLQKEGREFGVTTGRPRRCGWLDIPLLR
FTSQVNGYTALALTKTDILDKLDEIKIGVNYVKNGKALDHYPSGIFQFEG
VEVEYITMPGWKTSIAAVRKFEDLPQNAQKYVHKIEELLGIPMRWVGVGP
ERESMILRPDA*
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mRNA from alignment at Ecto-sp8_S_contig106239:21..506-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp8_S_contig106239.982.1 ID=mRNA_Ecto-sp8_S_contig106239.982.1|Name=mRNA_Ecto-sp8_S_contig106239.982.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=486bp|location=Sequence derived from alignment at Ecto-sp8_S_contig106239:21..506- (Ectocarpus species8 EcLAC_412)
AAGGCCTACACCACTAGGGTTGGAGATGGACCTTTCCCTACAGAGTTGAC TGAGGAGATTGGAGCTTTCCTTCAGAAGGAAGGAAGAGAGTTTGGTGTGA CAACTGGCAGACCCAGGAGGTGCGGCTGGCTGGACATCCCCCTGCTTAGG TTCACCAGCCAGGTGAACGGGTACACTGCCCTGGCCCTCACCAAGACTGA CATCCTGGACAAGCTGGATGAGATCAAGATTGGGGTGAATTATGTCAAGA ATGGGAAGGCTTTGGACCACTACCCATCAGGAATCTTCCAATTTGAAGGG GTTGAGGTTGAGTATATCACGATGCCTGGCTGGAAAACCTCCATTGCTGC TGTCAGGAAGTTCGAAGACCTTCCTCAAAACGCACAAAAATACGTTCATA AGATTGAAGAGCTTCTTGGCATACCTATGCGTTGGGTTGGAGTTGGCCCT GAGAGGGAGTCCATGATCCTGAGACCAGATGCTTGA
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Coding sequence (CDS) from alignment at Ecto-sp8_S_contig106239:21..506-

>mRNA_Ecto-sp8_S_contig106239.982.1 ID=mRNA_Ecto-sp8_S_contig106239.982.1|Name=mRNA_Ecto-sp8_S_contig106239.982.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=486bp|location=Sequence derived from alignment at Ecto-sp8_S_contig106239:21..506- (Ectocarpus species8 EcLAC_412)
AAGGCCTACACCACTAGGGTTGGAGATGGACCTTTCCCTACAGAGTTGAC
TGAGGAGATTGGAGCTTTCCTTCAGAAGGAAGGAAGAGAGTTTGGTGTGA
CAACTGGCAGACCCAGGAGGTGCGGCTGGCTGGACATCCCCCTGCTTAGG
TTCACCAGCCAGGTGAACGGGTACACTGCCCTGGCCCTCACCAAGACTGA
CATCCTGGACAAGCTGGATGAGATCAAGATTGGGGTGAATTATGTCAAGA
ATGGGAAGGCTTTGGACCACTACCCATCAGGAATCTTCCAATTTGAAGGG
GTTGAGGTTGAGTATATCACGATGCCTGGCTGGAAAACCTCCATTGCTGC
TGTCAGGAAGTTCGAAGACCTTCCTCAAAACGCACAAAAATACGTTCATA
AGATTGAAGAGCTTCTTGGCATACCTATGCGTTGGGTTGGAGTTGGCCCT
GAGAGGGAGTCCATGATCCTGAGACCAGATGCTTGA
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