mRNA_Ecto-sp8_S_contig10610.964.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig10610.964.1 vs. uniprot
Match: D8LT21_ECTSI (Polyketide_cyc domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LT21_ECTSI) HSP 1 Score: 192 bits (487), Expect = 6.650e-59 Identity = 91/92 (98.91%), Postives = 92/92 (100.00%), Query Frame = 1
Query: 1 YFPSKSSLTWTLDYTKKSTLDDSVGFWHVATHPSQDKQADWSRVYYSVQLRIPSWIPGIVIGYLNKKAIREATTWVKRESEEKYKADFAAGR 276
YFPSKSS+TWTLDYTKKSTLDDSVGFWHVATHPSQDKQADWSRVYYSVQLRIPSWIPGIVIGYLNKKAIREATTWVKRESEEKYKADFAAGR
Sbjct: 166 YFPSKSSMTWTLDYTKKSTLDDSVGFWHVATHPSQDKQADWSRVYYSVQLRIPSWIPGIVIGYLNKKAIREATTWVKRESEEKYKADFAAGR 257
BLAST of mRNA_Ecto-sp8_S_contig10610.964.1 vs. uniprot
Match: A0A835Z7Q3_9STRA (Polyketide_cyc domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7Q3_9STRA) HSP 1 Score: 119 bits (298), Expect = 7.820e-31 Identity = 54/93 (58.06%), Postives = 69/93 (74.19%), Query Frame = 1
Query: 1 YFPSKSSLTWTLDYTKKSTLDDSVGFWHVATHPSQDKQ--ADWSRVYYSVQLRIPSWIPGIVIGYLNKKAIREATTWVKRESEEKYKADFAAG 273
YF S SSLTWTLDY ++STLDDSVG+W+V P + KQ +WSRVYYS LR+P W+PGIV+ +L KKA+ EA W+KRE+E K+ D +G
Sbjct: 137 YFKSLSSLTWTLDYARRSTLDDSVGYWYVEPCPDKSKQDVQEWSRVYYSCMLRVPKWVPGIVVNFLEKKAVSEANMWLKREAEAKFAKDKVSG 229
BLAST of mRNA_Ecto-sp8_S_contig10610.964.1 vs. uniprot
Match: A0A7S2E2U9_9STRA (Hypothetical protein n=2 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2E2U9_9STRA) HSP 1 Score: 104 bits (260), Expect = 4.640e-26 Identity = 50/96 (52.08%), Postives = 67/96 (69.79%), Query Frame = 1
Query: 1 YFPSKSSLTWTLDYTKKSTLDDSVGFWHVATHPSQDKQADWSRVYYSVQLRIPSWIPGIVIGYLNKKAIREATTWVKRESE-----EKYKADFAAG 273
YFPS +SLTWTLDYTKKS DDS G+W++ HP DK DW+RVYYSV++ + W+P V+ +++ KA+ +AT WVK+ SE E+ K AAG
Sbjct: 19 YFPSLNSLTWTLDYTKKSDFDDSCGYWYIVPHP--DKPEDWTRVYYSVEVAMFDWVPKFVVDFMSSKALTDATGWVKKFSELEWEKEEVKIKAAAG 112
BLAST of mRNA_Ecto-sp8_S_contig10610.964.1 vs. uniprot
Match: A0A6U4DG12_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A6U4DG12_9STRA) HSP 1 Score: 104 bits (259), Expect = 1.050e-24 Identity = 46/87 (52.87%), Postives = 65/87 (74.71%), Query Frame = 1
Query: 1 YFPSKSSLTWTLDYTKKSTLDDSVGFWHVATHPSQDKQADWSRVYYSVQLRIPSWIPGIVIGYLNKKAIREATTWVKRESEEKYKAD 261
Y+P+ SSLTWTLDY+KKS DDSVG+W+V HP + WSRVYYS+ + + W+P V+ +++ KA+ +AT WVK+ SEEK+K+D
Sbjct: 174 YYPTLSSLTWTLDYSKKSDFDDSVGYWYVVPHPDR---LGWSRVYYSIAVSMFDWVPKTVVNFMSTKALTDATGWVKKFSEEKWKSD 257
BLAST of mRNA_Ecto-sp8_S_contig10610.964.1 vs. uniprot
Match: A0A7S2R0C2_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R0C2_9STRA) HSP 1 Score: 99.4 bits (246), Expect = 4.910e-23 Identity = 44/84 (52.38%), Postives = 61/84 (72.62%), Query Frame = 1
Query: 1 YFPSKSSLTWTLDYTKKSTLDDSVGFWHVATHPSQDKQADWSRVYYSVQLRIPSWIPGIVIGYLNKKAIREATTWVKRESEEKY 252
Y+PS +SLTWTLDYTKKS DDS G+W++ HP DK W+RVYYSV++ + WIP + +++ KA+ +AT WVK+ SE +Y
Sbjct: 155 YYPSLNSLTWTLDYTKKSDFDDSCGYWYIIPHP--DKPQSWTRVYYSVEVSMFDWIPKFALDFISAKALVDATAWVKKFSELEY 236
BLAST of mRNA_Ecto-sp8_S_contig10610.964.1 vs. uniprot
Match: A0A7S1GPF2_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GPF2_CYCTE) HSP 1 Score: 97.1 bits (240), Expect = 5.250e-23 Identity = 43/84 (51.19%), Postives = 60/84 (71.43%), Query Frame = 1
Query: 1 YFPSKSSLTWTLDYTKKSTLDDSVGFWHVATHPSQDKQADWSRVYYSVQLRIPSWIPGIVIGYLNKKAIREATTWVKRESEEKY 252
Y P +SLTWTLDY+KKS DDS G+W+V HP D +W+RVYYSV++ + W+P V+ +L+ KA+ +AT WVK+ SE +Y
Sbjct: 17 YEPKLNSLTWTLDYSKKSDFDDSCGYWYVIPHP--DNPTEWTRVYYSVEVSMFDWVPKFVVNFLSTKALTDATAWVKKFSELEY 98
BLAST of mRNA_Ecto-sp8_S_contig10610.964.1 vs. uniprot
Match: A0A4D9CYH6_9STRA (Polyketide_cyc domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CYH6_9STRA) HSP 1 Score: 99.8 bits (247), Expect = 7.950e-23 Identity = 44/91 (48.35%), Postives = 61/91 (67.03%), Query Frame = 1
Query: 1 YFPSKSSLTWTLDYTKKSTLDDSVGFWHVATHPSQDKQADWSRVYYSVQLRIPSWIPGIVIGYLNKKAIREATTWVKRESEEKYKADFAAG 273
Y PS +LTWTLDY ++S L+D+ G+W V + K DWSRV+YSV LRIP+W+P +V+ LN +A+ AT WVK +SE Y+ +G
Sbjct: 184 YRPSIRTLTWTLDYDRQSDLEDTAGYWSVVPLDKEGKVGDWSRVFYSVDLRIPAWVPQLVVNILNTQALTTATAWVKTQSERAYQTSALSG 274
BLAST of mRNA_Ecto-sp8_S_contig10610.964.1 vs. uniprot
Match: A0A7S2A9L4_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A9L4_TRICV) HSP 1 Score: 94.0 bits (232), Expect = 8.880e-23 Identity = 41/87 (47.13%), Postives = 62/87 (71.26%), Query Frame = 1
Query: 1 YFPSKSSLTWTLDYTKKSTLDDSVGFWHVATHPSQDKQADWSRVYYSVQLRIPSWIPGIVIGYLNKKAIREATTWVKRESEEKYKAD 261
Y+PS +SLTWTLDY K+S DDS G+W+V HP D +RVYYSV++ + W+P V+ +++ KA+ +AT+WVK+ SE +++ D
Sbjct: 25 YYPSLNSLTWTLDYAKRSDFDDSCGYWYVVPHP--DDPEGRTRVYYSVEVSMFDWVPKFVVDFMSSKALTDATSWVKKHSEMRWEKD 109
BLAST of mRNA_Ecto-sp8_S_contig10610.964.1 vs. uniprot
Match: A0A7S2SSE8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SSE8_9STRA) HSP 1 Score: 97.8 bits (242), Expect = 1.380e-22 Identity = 44/84 (52.38%), Postives = 57/84 (67.86%), Query Frame = 1
Query: 1 YFPSKSSLTWTLDYTKKSTLDDSVGFWHVATHPSQDKQADWSRVYYSVQLRIPSWIPGIVIGYLNKKAIREATTWVKRESEEKY 252
Y P K SLTWTLDY ++S DD VG W+VA HPS+ DWS+VYYS L + W+PG+V+ L A++ A TWVK+ SE +Y
Sbjct: 146 YVPLKKSLTWTLDYERESDFDDVVGHWYVAPHPSRP---DWSQVYYSADLALKGWVPGVVMNILTNSALKSAVTWVKKFSEAEY 226
BLAST of mRNA_Ecto-sp8_S_contig10610.964.1 vs. uniprot
Match: A0A7S4NBB6_9STRA (Hypothetical protein (Fragment) n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4NBB6_9STRA) HSP 1 Score: 90.1 bits (222), Expect = 7.220e-20 Identity = 42/87 (48.28%), Postives = 60/87 (68.97%), Query Frame = 1
Query: 1 YFPSKSSLTWTLDYTKKSTLDDSVGFWHVATHPSQDKQADWSRVYYSVQLRIPSWIPGIVIGYLNKKAIREATTWVKRESEEKYKAD 261
++PS SLTWTLDYTKKS LDDS G+W+V HP + +RVYYSVQ+ + W P V+ +++ +A+ +AT WVK+ SE ++ D
Sbjct: 163 HYPSLRSLTWTLDYTKKSDLDDSCGYWYVIPHPDDPDRR--TRVYYSVQVSMFDWAPKFVVDFMSSRALTDATGWVKKYSELEWAKD 247 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig10610.964.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig10610.964.1 >prot_Ecto-sp8_S_contig10610.964.1 ID=prot_Ecto-sp8_S_contig10610.964.1|Name=mRNA_Ecto-sp8_S_contig10610.964.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=92bp YFPSKSSLTWTLDYTKKSTLDDSVGFWHVATHPSQDKQADWSRVYYSVQLback to top mRNA from alignment at Ecto-sp8_S_contig10610:4867..6621- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig10610.964.1 ID=mRNA_Ecto-sp8_S_contig10610.964.1|Name=mRNA_Ecto-sp8_S_contig10610.964.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=1755bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10610:4867..6621- (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig10610:4867..6621- >mRNA_Ecto-sp8_S_contig10610.964.1 ID=mRNA_Ecto-sp8_S_contig10610.964.1|Name=mRNA_Ecto-sp8_S_contig10610.964.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=276bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10610:4867..6621- (Ectocarpus species8 EcLAC_412)back to top |