mRNA_Ecto-sp8_S_contig10607.956.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig10607.956.1 vs. uniprot
Match: A0A6H5K1V2_9PHAE (Ubiquitin-like domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1V2_9PHAE) HSP 1 Score: 717 bits (1852), Expect = 1.990e-255 Identity = 397/433 (91.69%), Postives = 402/433 (92.84%), Query Frame = 1
Query: 1 MAEFGAKLCSYPGCRQHDFLPYACPACRQVFCSDHMAIGSGHRCDQGEEYLASRMGEGGRTAAPGSHPLSLSKPSEVMSAVTSRFDGREKELNAATTHYNIKASEGGAGEGSAGAPDKLLENSQLAMDKAATEKGKRVSTQVHRMLLKAKAVGDKKLRMEDRFFLEVHYCGNDTNVHHLFFSRLWTVGRALDDILKTRRRHLRLKAGEEARPLELARVGASSGLPTGGILNNLPPEQLQSFDAVMVRPRTLPPAGSSASDTSAEGGSSDSAVAAPGLNVEGAPDDLKGSGIGGDEAPLEQQQRQTGHVLSICAVGAKASGCEEAGAGXXXXXXXXXXXXXXXXXXASEXXXXXXGMTITVGHGKSVYELGGVMPDRMSVLELKRRLEPITGVPFLRQKLLFKGILRDGDKIGATKIVEGAKVMLLGTAAAAAK 1299
MAEFGAKLCSYPGCRQHDFLPYAC ACRQVFCSDHMAIGSGHRCD GEEYLASR G+GGR AAPGSH LSLSKPSEVMSAVTSRFDGREKELNA TTH+NIKASEG AGEGSAGAPDKLL NSQLAMDKAATEKGKRVSTQVHRMLLKAKAVGDKKLRMEDRFFLEVHYCGNDT+VHHLFFSRLWTVGRALDDILKTRRRHLRLKAGEEARPLELARVGASSGLPTGGI NLPPEQLQ FDAVMVRPRTLP AGSSASD SAEGGSSDS VAAPGLNVE APDDLKGSGIGGDE P EQQQRQTGHVLS CAVGAK+SG EEA AG XXXXXXXXXXXX XXXXXXGMTITV HGKSVYELGGVMPDRMSVL+LKRRLEPITGVPFLRQKLLFKGILRDGDKIGATKIVEGAKVMLLGTAAAA K
Sbjct: 1 MAEFGAKLCSYPGCRQHDFLPYACAACRQVFCSDHMAIGSGHRCDHGEEYLASRNGKGGRIAAPGSHRLSLSKPSEVMSAVTSRFDGREKELNAVTTHFNIKASEGEAGEGSAGAPDKLLRNSQLAMDKAATEKGKRVSTQVHRMLLKAKAVGDKKLRMEDRFFLEVHYCGNDTDVHHLFFSRLWTVGRALDDILKTRRRHLRLKAGEEARPLELARVGASSGLPTGGIFTNLPPEQLQLFDAVMVRPRTLPRAGSSASDISAEGGSSDSTVAAPGLNVESAPDDLKGSGIGGDEEPSEQQQRQTGHVLSTCAVGAKSSGFEEAVAGSGVTSAXXXXXXXXXXXXXXXXXXXXXGMTITVCHGKSVYELGGVMPDRMSVLDLKRRLEPITGVPFLRQKLLFKGILRDGDKIGATKIVEGAKVMLLGTAAAAKK 433
BLAST of mRNA_Ecto-sp8_S_contig10607.956.1 vs. uniprot
Match: D8LBN6_ECTSI (Ubiquitin-like domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBN6_ECTSI) HSP 1 Score: 527 bits (1357), Expect = 1.150e-181 Identity = 301/317 (94.95%), Postives = 309/317 (97.48%), Query Frame = 1
Query: 352 KLLENSQLAMDKAATEKGKRVSTQVHRMLLKAKAVGDKKLRMEDRFFLEVHYCGNDTNVHHLFFSRLWTVGRALDDILKTRRRHLRLKAGEEARPLELARVGASSGLPTGGILNNLPPEQLQSFDAVMVRPRTLPPAGSSASDTSAEGGSSDSAVAAPGLNVEGAPDDLKGSGIGGDEAPLEQQQRQTGHVLSICAVGAKASGCEEAGAGXXXXXXXXXXXXXXXXXXASEXXXXXXGMTITVGHGKSVYELGGVMPDRMSVLELKRRLEPITGVPFLRQKLLFKGILRDGDKIGATKIVEGAKVMLLGTAAAAAKK 1302
+LL+NSQLAMDKAATEKGKR+STQVHRMLLKAKAVGDKKLRMEDRFFLEVHYCGNDT+VHHLFFSRLWTVGRALD ILKTRRRH+RLKAGEEARPLELARVGASSGLPTGGILNNLPPEQLQSFDAVMVRPRTLPPAGSSASDTSA+GGSSDSAVAAPGLNVEGAPDDLKGSGIGGDE P +QQQRQTGHVLS CAVGAKASGCEEAG G XXXXXXXXXXXXXXXXASEXXXXXXGMTITVGHGKSVYELGGVMPDRMSVL+LKRRLEPITGVPFLRQKLLFKGILRDGDKIGATKIVEGAKVMLLGT AAAAKK
Sbjct: 32 RLLKNSQLAMDKAATEKGKRMSTQVHRMLLKAKAVGDKKLRMEDRFFLEVHYCGNDTDVHHLFFSRLWTVGRALDHILKTRRRHMRLKAGEEARPLELARVGASSGLPTGGILNNLPPEQLQSFDAVMVRPRTLPPAGSSASDTSAQGGSSDSAVAAPGLNVEGAPDDLKGSGIGGDEEPNKQQQRQTGHVLSTCAVGAKASGCEEAGEGSGXXXXXXXXXXXXXXXXASEXXXXXXGMTITVGHGKSVYELGGVMPDRMSVLDLKRRLEPITGVPFLRQKLLFKGILRDGDKIGATKIVEGAKVMLLGTVAAAAKK 348
BLAST of mRNA_Ecto-sp8_S_contig10607.956.1 vs. uniprot
Match: A0A4D9CUT0_9STRA (Ubiquitin-like domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CUT0_9STRA) HSP 1 Score: 78.6 bits (192), Expect = 1.080e-11 Identity = 73/233 (31.33%), Postives = 104/233 (44.64%), Query Frame = 1
Query: 4 AEFGAKLCSYPGCRQHDFLPYACPACRQVFCSDHMAIGSGHRCDQGEEYLASRMGEG---GRTAAPGSHPLSLSKPSEVMSAVTSRFDGREKELNAATTHYNIKASEGGAGEGSAGAPDKLLENSQLAMDKAATE-KGKRVSTQVHRMLLKAKAVGDKKLRMEDRFFLEVHYCGNDTN---------------------------VHHLFFSRLWTVGRALDDILKTRRRHLR 609
A +G K C+ C ++DFLP+ C C + C+DHMA + H C E+ + + GR A E M V RFDG + A H+ ++ S+ G S A +K L+ + T KG + +V +MLLK+KA G L +DRF+LEV G D V +LFFSRLW++GR LD+ ++ RR LR
Sbjct: 3 AHYGDK-CAL--CGRNDFLPHRCTLCSLLHCTDHMAPFA-HECAGREDNTSKDRPQAFGLGRALA------------EEMDRVRRRFDGASEW--ATKEHFRVQGSQAGL-VASFRAENKYLKAYREQAKAGKTRHKGHKTREKVRQMLLKSKAQGRSSLHADDRFYLEVRIGGLDVEEKGTASPSSLPPSAPASTPSVASSAEVVDYLFFSRLWSLGRVLDETIEKHRRALR 216
BLAST of mRNA_Ecto-sp8_S_contig10607.956.1 vs. uniprot
Match: A0A7S3UX29_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UX29_HETAK) HSP 1 Score: 73.6 bits (179), Expect = 1.010e-10 Identity = 75/292 (25.68%), Postives = 126/292 (43.15%), Query Frame = 1
Query: 433 MLLKAKAVGDKKLRMEDRFFLEVHYCGNDTN-VHHLFFSRLWTVGRALDDILKTRRRHLRLKAGEEARPLELARVGASSGLPTGGILNNLPPEQLQSFDAVMVRPRTLPPAGSSASDTSAEGGSSDSAVAAPGLNVEGAPDDLKGSGIGGDEAPLEQQQRQT-------GHVLSICAVGAKASGCE---EAGAGXXXXXXXXXXXXXXXXXXASEXXXXXXGMTITVGHGKSVYELGGVMPDRMSVLELKRRLEPITGVPFLRQKLLFKGILRDGDKIGATKIVEGAKVMLL 1275
M +K+K+ G + +++FF+ V D N H++F RLWTVGRA+D ++ R +A L R+ + T I++ +L+ FD V++ + G+ D + G ++G PD+ K + E Q + G + + AK + + + +G A E T V GK +Y + + + +VL+LK +LE +TG+P +QKLL+KGIL+D I T + GAKV+L+
Sbjct: 1 MKIKSKSAGPAGVLNDNKFFVLVQLKTPDINWERHMYFPRLWTVGRAIDYVISFLSEEYRRAILGKALELYCERINSIVSKDT--IIHG---SKLEEFDTVIL----------------SFAGAFD--LLLDGSCLDGEPDEKKQTSYAEHEGATRQSKMDKSIKADNGGEQTILASRDAKLNDEKCLISSSSGGPLSLQMNADSLIPPSSPAHESNPGTSSFTFYVKVGKEMYSVADLDENANTVLDLKVKLEQLTGIPVQQQKLLYKGILQDSQVICGTAVKAGAKVILM 269
BLAST of mRNA_Ecto-sp8_S_contig10607.956.1 vs. uniprot
Match: V5I0M0_IXORI (AN1-type domain-containing protein n=4 Tax=Ixodes TaxID=6944 RepID=V5I0M0_IXORI) HSP 1 Score: 65.1 bits (157), Expect = 6.780e-8 Identity = 57/201 (28.36%), Postives = 87/201 (43.28%), Query Frame = 1
Query: 19 KLCSYPGCRQHDFLPYACPACRQVFCSDHMAIGSGHRCDQGEEY-LASRMGEGGRTAAPGSHPLSLSKPSEVMSAV----TSRF--------DGREKELNAATTHYNIKASEGGAGEGSAGAPDKLLENSQLAMDKAATEKGKRVSTQ-VHRMLLKAKAVGDKKLRMEDRFFLEVHYC-GNDTNVHHLFFSRLWTVGRALD 576
K C C + DFLP+ C C+++FCSDH + H CDQ E + L + +T K E+M V + F D + K L + + H + K+LE+ + + A+T + Q V M +K A G+K + + DR + EV+ G+ FS+LWTVGRA+D
Sbjct: 9 KHCHVESCNRLDFLPFECAHCKKIFCSDHRTSDA-HVCDQIETHVLTDSQAKSSKTGTLFGCTFGDCKQKELMPVVCTLCSDNFCVHHRHAQDHKCKYLASPSEHMPLTTQ----------VVQKILESKKPSEKPASTRANISPTAQKVKLMRMKMHAAGEKSIPLVDRVYFEVYLPKGHKVRSKPYHFSKLWTVGRAID 198
BLAST of mRNA_Ecto-sp8_S_contig10607.956.1 vs. uniprot
Match: UPI001AE2900F (AN1-type zinc finger protein 1-like n=1 Tax=Lepeophtheirus salmonis TaxID=72036 RepID=UPI001AE2900F) HSP 1 Score: 59.7 bits (143), Expect = 4.030e-6 Identity = 54/202 (26.73%), Postives = 86/202 (42.57%), Query Frame = 1
Query: 1 MAEFG--AKLCSYPGCRQHDFLPYACPACRQVFCSDHMAIGSGHRCDQGEEYLASRMGEGGRTAAPGSHPLSLSKPSEV------MSAVTSRFDGREKELNAATTHYNIKASEGGAGEGSAGAPDKLLENSQLAMDKAATEKGKRVSTQVHRMLLKAKAVGDKKLRMEDRFFLEVHYCGNDTNVHHLFFSRLWTVGRALDDI 582
MAEF CS+P CRQ DFLP C C + FC++H + H C + G + K E+ M +T+ R + + ++ K G E + LE+ ++ K T+K K+ + +V M LK A+G K + +DR F ++ N ++ S+ W+ G+ALD I
Sbjct: 1 MAEFTDIGSQCSFPSCRQLDFLPVKCNYCEENFCTEH-SFPEKHECPNFSQQEIKEKSHGPVSPLYFKCQFKDCKEKEIAEICCSMCHITTCLTHRHPKDHDCPSNVPGKDPLGDTKEH---IKNLNLESEEVKKRKLRTDKAKKTAARVQLMKLKMNAIGAKSIPTDDRIFFKIVL--PKKNPLSVYVSKDWSWGKALDSI 196
BLAST of mRNA_Ecto-sp8_S_contig10607.956.1 vs. uniprot
Match: UPI001894C229 (AN1-type zinc finger protein 1-like isoform X4 n=1 Tax=Rhipicephalus sanguineus TaxID=34632 RepID=UPI001894C229) HSP 1 Score: 58.5 bits (140), Expect = 5.640e-6 Identity = 57/202 (28.22%), Postives = 86/202 (42.57%), Query Frame = 1
Query: 19 KLCSYPGCRQHDFLPYACPACRQVFCSDHMAIGSGHRCDQGEEYLAS-RMGEGGRTAAPGSHPLSLSKPSEVMS----------AVTSRF--DGREKELNAATTHYNIKASEGGAGEGSAGAPDKLLENSQLAMDKAATEKGKRVST--QVHRMLLKAKAVGDKKLRMEDRFFLEVHYC-GNDTNVHHLFFSRLWTVGRALD 576
K C C + DFLP+ C C+ FCSDH + H CDQ + ++ S + + RT S E+ V R D + K L + H + K+LE+ + A +K + K T +V M +K A G+K + + DR + EV++ G+ FS+LWTVGRA+D
Sbjct: 9 KHCHVESCNRLDFLPFECVHCKNTFCSDHRTSDA-HVCDQVQTHILSDKEAKCSRTGTLFGCTFSECTQKELTPIACGLCAANFCVRHRHAQDHKCKCLQSQAEHMPLTTK----------VVQKILESKKPA-EKTMSSKASISPTAQKVKLMKMKMHAAGEKNVPLADRVYFEVYFPKGHKVRSKPYHFSKLWTVGRAID 198
BLAST of mRNA_Ecto-sp8_S_contig10607.956.1 vs. uniprot
Match: A0A7S0CFP0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CFP0_9STRA) HSP 1 Score: 53.9 bits (128), Expect = 7.830e-5 Identity = 37/81 (45.68%), Postives = 49/81 (60.49%), Query Frame = 1
Query: 373 LAMDKAATEKGK--RVSTQVHRMLLKAKAVGDKKLRMEDRFFLEV----HYCGNDTNVHH---LFFSRLWTVGRALDDILK 588
LA A+ +KGK +V+TQV ML K++A G+KKLR EDRF LEV ++T +FFSR TVGR L ++K
Sbjct: 19 LARLDASNKKGKQQKVNTQVRNMLFKSRATGNKKLRNEDRFHLEVVTIQQEIRSETKPQEQQFMFFSRQATVGRVLTSVIK 99 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig10607.956.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig10607.956.1 >prot_Ecto-sp8_S_contig10607.956.1 ID=prot_Ecto-sp8_S_contig10607.956.1|Name=mRNA_Ecto-sp8_S_contig10607.956.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=435bp MAEFGAKLCSYPGCRQHDFLPYACPACRQVFCSDHMAIGSGHRCDQGEEYback to top mRNA from alignment at Ecto-sp8_S_contig10607:1309..6703- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig10607.956.1 ID=mRNA_Ecto-sp8_S_contig10607.956.1|Name=mRNA_Ecto-sp8_S_contig10607.956.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=5395bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10607:1309..6703- (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig10607:1309..6703- >mRNA_Ecto-sp8_S_contig10607.956.1 ID=mRNA_Ecto-sp8_S_contig10607.956.1|Name=mRNA_Ecto-sp8_S_contig10607.956.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=1305bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10607:1309..6703- (Ectocarpus species8 EcLAC_412)back to top |