mRNA_Ecto-sp8_S_contig10602.948.1 (mRNA) Ectocarpus species8 EcLAC_412

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp8_S_contig10602.948.1
Unique NamemRNA_Ecto-sp8_S_contig10602.948.1
TypemRNA
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Homology
BLAST of mRNA_Ecto-sp8_S_contig10602.948.1 vs. uniprot
Match: A0A6H5JE63_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JE63_9PHAE)

HSP 1 Score: 702 bits (1813), Expect = 1.840e-248
Identity = 372/428 (86.92%), Postives = 385/428 (89.95%), Query Frame = 1
Query:  133 MAKGATCGYLRRICNAVLVLQLGVLGQASNSQVVRVSRAVSRSRGSSKKGGAFVGLLAAPLAWRHRCHKLGTHPAGRNGIARLALPAAACSPEGSSALSATRPGSELPEEVQYGFWAPASKELHRDQWAPPASKKARFGGPSHSASGRLGGLLVSRGQPYNVVLTHLSADFDSLAAAVGVAKLWNAEDRKASVPTYVVLPRGAHPSVSKFLALHQELFPILGLELLDPTGARKVGMCDAQTRDRVGPASELLDQAESVHVYDHHVDKDSDIVDAVLHIESVGAATTVVTEMIRSGLEKGAGVGLQLTEAESTLLALGIHADTAGSLTYDSATARDAAALAWLMMQGCQQTVVSEYTHTSLSEGQQSSLVEAFGSLEKRQHNGVSVGSVLLVNEERVAGMARSGPSSFRLTCVILFFPSDCHDDEIGRA 1416
            MAK AT GYLRRI  A L+LQLGVLGQASNSQV R SRAVSR RGSSK+G AFVGL AAPLAWRHRCHKLGTHPAG   IARLA PAAAC PEGSS LSAT P SE PEEVQYGFWAPASKELHR  WAPPASKKARFGGPSHSASGRLGGLL SRGQPYNVVLTH+SADFDSLAAAVGVAKLWNAEDRKASVPTYVVLPRGAHPSVSKFLALHQELFPILGLELLDPTGARKVGMCDAQTRDRVGPASELLDQAESVHVYDHHVDKDSDIVDAVLHIESVGAATT+VTEMIRSGLE+GAGVG++LTEAE TLLALGIH DT GSLTYDSATARDAAALAWLM QGCQQTVVSEYTHTSLSEGQQSSLVEAFGSLEKRQH GVSVGSVLLVNEERVAGMAR   +   ++ V +    + H  + GRA
Sbjct:    1 MAKCATRGYLRRIYIAALILQLGVLGQASNSQVARFSRAVSRRRGSSKEGDAFVGLPAAPLAWRHRCHKLGTHPAGCKRIARLAPPAAACWPEGSSGLSATGPESEPPEEVQYGFWAPASKELHRIHWAPPASKKARFGGPSHSASGRLGGLLASRGQPYNVVLTHISADFDSLAAAVGVAKLWNAEDRKASVPTYVVLPRGAHPSVSKFLALHQELFPILGLELLDPTGARKVGMCDAQTRDRVGPASELLDQAESVHVYDHHVDKDSDIVDAVLHIESVGAATTMVTEMIRSGLEQGAGVGVELTEAEGTLLALGIHGDT-GSLTYDSATARDAAALAWLMTQGCQQTVVSEYTHTSLSEGQQSSLVEAFGSLEKRQHKGVSVGSVLLVNEERVAGMARVAQNLLDMSEVGVLLVGEMHPSKPGRA 427          
BLAST of mRNA_Ecto-sp8_S_contig10602.948.1 vs. uniprot
Match: D8LJV0_ECTSI (Polynucleotide adenylyltransferase region n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJV0_ECTSI)

HSP 1 Score: 476 bits (1224), Expect = 4.920e-162
Identity = 254/260 (97.69%), Postives = 256/260 (98.46%), Query Frame = 1
Query:  562 SASGRLGGLLVSRGQPYNVVLTHLSADFDSLAAAVGVAKLWNAEDRKASVPTYVVLPRGAHPSVSKFLALHQELFPILGLELLDPTGARKVGMCDAQTRDRVGPASELLDQAESVHVYDHHVDKDSDIVDAVLHIESVGAATTVVTEMIRSGLEKGAGVGLQLTEAESTLLALGIHADTAGSLTYDSATARDAAALAWLMMQGCQQTVVSEYTHTSLSEGQQSSLVEAFGSLEKRQHNGVSVGSVLLVNEERVAGMARSG 1341
            SASGRLGGLLVSRGQPYNVVLTHLSADFDSLAAAVGVAKLWNAEDRK  VPTYVVLPRGAHPSVSKFLALHQELFPILGLELLDPTGARKVGMCDAQTRDRVGPASELLDQAESVHVYDHHVDKDSDIVDAVLHIESVGAATTVVTEMIRSGLE+GAGVG+QLTEAESTLLALGIHADT GSLTYDSATARDAAALAWLMMQGCQQTVVSEYTHTSLSEGQQSSLVEAFGSLEKRQHNGVSVGSVLLVNEERVAGMAR G
Sbjct:    7 SASGRLGGLLVSRGQPYNVVLTHLSADFDSLAAAVGVAKLWNAEDRK--VPTYVVLPRGAHPSVSKFLALHQELFPILGLELLDPTGARKVGMCDAQTRDRVGPASELLDQAESVHVYDHHVDKDSDIVDAVLHIESVGAATTVVTEMIRSGLEQGAGVGVQLTEAESTLLALGIHADT-GSLTYDSATARDAAALAWLMMQGCQQTVVSEYTHTSLSEGQQSSLVEAFGSLEKRQHNGVSVGSVLLVNEERVAGMARFG 263          
BLAST of mRNA_Ecto-sp8_S_contig10602.948.1 vs. uniprot
Match: A0A835YMN8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMN8_9STRA)

HSP 1 Score: 240 bits (612), Expect = 8.410e-69
Identity = 132/267 (49.44%), Postives = 177/267 (66.29%), Query Frame = 1
Query:  613 NVVLTHLSADFDSLAAAVGVAKLWNAEDRKASVPTYVVLPRGAHPSVSKFLALHQELFPILGLELLDPTGARKVGMCDAQTRDRVGPASELLDQAES---------------------------VHVYDHHVDKDSDIVDAVLHIESVGAATTVVTEMIRSGLEKGAGVGLQLTEAESTLLALGIHADTAGSLTYDSATARDAAALAWLMMQGCQQTVVSEYTHTSLSEGQQSSLVEAFGSLEKRQHNGVSVGSVLLVNEERVAGMA 1332
            NVVLTH +ADFDSLAAAVG+A++W +E  +  +P YV LPRG+HP+V+ FLALH+ LFP++ L+ +      +VG+ DAQ +DRVGPA  LLD AE                            VHV+DHH +K SDI    L IE VG+ TT++ E+++ G       GL+L +AE+TL+ALG+H+DT GSLT++SAT+RDA ALAWLM QG  Q  +SEY H SLS  QQS+L +AF +L+KR HNGV++GS L+  +  + GMA
Sbjct:  100 NVVLTHTTADFDSLAAAVGLARVWQSE--QPHIPCYVCLPRGSHPNVAHFLALHKNLFPVIALKDVSADQVHRVGLVDAQRKDRVGPAETLLDTAEESCANLRHVCHVCSADMCCNGGQWRGAKVHVFDHHFEKTSDIAATKLVIEKVGSVTTIIAELLQKG-------GLRLRDAEATLMALGVHSDT-GSLTFESATSRDARALAWLMDQGASQAAISEYGHASLSPDQQSALADAFNTLQKRHHNGVTIGSALIDCDSYIKGMA 356          
BLAST of mRNA_Ecto-sp8_S_contig10602.948.1 vs. uniprot
Match: D8LQ45_ECTSI (Phosphoesterase, RecJ-like protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQ45_ECTSI)

HSP 1 Score: 218 bits (555), Expect = 3.260e-60
Identity = 127/270 (47.04%), Postives = 169/270 (62.59%), Query Frame = 1
Query:  604 QPYNVVLTHLSADFDSLAAAVGVAKLWNAEDRKASVPTYVVLPRGAHPSVSKFLALHQELFPILGLELLDPTGARKVGMCDAQTRDRVGPASELLDQAESVHVYDHHVDKDSDIVDAVLHIESVGAATTVVTEMIRSGLEKGAGVGLQLTEAESTLLALGIHADTAGSLTYDSATARDAAALAWLMMQGCQQTVVSEYTHTSLSEGQQSSLVEAFGSLEKRQHNGVSVGSVLLVNEERVAGMARSGPSSFRLTCVILFFPSDCHDDEIGR 1413
            Q  NVVLTH +ADFD+LAAAVG+AKLW  +D +      V LPRG HP V +FL LH+ LFPI  L  +D     +VG+ DAQ  DR+G A+ LL  A  VHV DHH ++ SDI    + IE VG+ +T++TE ++         GLQ+ EAE+TLLALG+H+DT GSLT+DSATARDA ALAWLM QG  Q  ++EY H +LS+ QQS+L E   +L +   NG +V + L+  +  V GMA    +   +T   +F        ++GR
Sbjct:  176 QALNVVLTHTTADFDTLAAAVGLAKLW--QDERPDDECCVCLPRGTHPVVKRFLTLHKNLFPIKALRDIDHDRIFRVGLVDAQKIDRIGTAASLLANATEVHVVDHHNEQSSDINATSIVIEEVGSVSTIITEKLQER-------GLQMEEAEATLLALGVHSDT-GSLTFDSATARDAVALAWLMEQGSSQQAIAEYGHAALSQEQQSTLTECINNLNRTSLNGATVSTALVQLDSYVNGMAAVAQNVLDVTDSDVFMLGAHFPQKLGR 435          
BLAST of mRNA_Ecto-sp8_S_contig10602.948.1 vs. uniprot
Match: W7U1M5_9STRA (Polynucleotide adenylyltransferase region n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U1M5_9STRA)

HSP 1 Score: 214 bits (545), Expect = 4.850e-59
Identity = 121/258 (46.90%), Postives = 164/258 (63.57%), Query Frame = 1
Query:  604 QPYNVVLTHLSADFDSLAAAVGVAKLWNAEDRKASVPTYVVLPRGAHPSVSKFLALHQELFPILGLELLDPTGARKVGMCDAQTRDRVGPASELLDQAESVHVYDHHVDKDSDIVDAVLHIESVGAATTVVTEMIRSGLEKGAGVGLQLTEAESTLLALGIHADTAGSLTYDSATARDAAALAWLMMQGCQQTVVSEYTHTSLSEGQQSSLVEAFGSLEKRQHNGVSVGSVLLVNEERVAGMARSGPSSFRLT-CVIL 1374
            Q  NVVLTH  ADFDSLAAAVG+AK W+ ++ +     YV +P+GAHPSV  FLALH  LFP+  L  +DP+   K+G+ DA T+DR+G    LL  A  VHV+DHH  K  DI    L++E VG+ TT+V E +R          + +T+AE+TLLA+GIHADT GS+TYD  T RD  ALAW+M  G +Q V++E+ H  L++ QQ  L E+F  L    + GV++G+V++  +E V G+AR       LT C +L
Sbjct:  118 QAINVVLTHAIADFDSLAAAVGLAKYWSHQNPETEA--YVCMPQGAHPSVEAFLALHSVLFPLRALGTIDPSHVHKLGVVDASTKDRLGAGQGLLASAREVHVFDHHAMKVPDIEATALNLEDVGSVTTMVVERLREA-------DVNITDAEATLLAIGIHADT-GSMTYDCTTVRDVEALAWVMRHGARQPVIAEFCHQRLTQHQQHFLSESFVRLNTTLYEGVNIGTVVVDCQEYVGGLARVAQHVLELTSCDVL 365          
BLAST of mRNA_Ecto-sp8_S_contig10602.948.1 vs. uniprot
Match: A0A7S4V3V2_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4V3V2_9STRA)

HSP 1 Score: 210 bits (535), Expect = 2.540e-57
Identity = 126/290 (43.45%), Postives = 180/290 (62.07%), Query Frame = 1
Query:  610 YNVVLTHLSADFDSLAAAVGVAKLWNAEDRKAS-------------------VPTYVVLPRGAHPSVSKFLALHQELFPILGLELL--DPTGARKVGMCDAQTRDRVGPASELLDQAESVHVYDHHVDKDSDIVDAVLHI-ESVGAATTVVTEMIRSGLEKGAGVGLQLTEAESTLLALGIHADTAGSLTYDSATARDAAALAWLMMQGCQQTVVSEYTHTSLSEGQQSSLVEAFGSLEKRQHNGVSVGSVLLVNEERVAGMARSGPSSFRLTCVILFFPSDCHDDEIGR 1413
            +NVVLTH +ADFDSLA+AVG+AKLW++  + +S                   +PT+VVLPRGAHP+V KFL+LH+ LFPI  L+ L  D +G  ++G+ DAQ RDR+GPA  LL  A+ V V DHH+D ++DI +A  ++ E VG+ +T++ E ++          L+L+EAE+TLLALGIHADT GSL YDS T RDA AL+W M QG  Q  ++E+  +SLS  QQ  L +A  +      +GV+V +VLL  +  + G+A     +  L+   +F  +  +D + G 
Sbjct:  239 FNVVLTHCTADFDSLASAVGLAKLWSSSPKGSSXXXXXXXXXXXXXKNKQKVIPTFVVLPRGAHPAVQKFLSLHKHLFPIRSLKSLPSDLSGLHRLGLVDAQRRDRIGPAEHLLSYAKRVTVVDHHIDGETDIPEATDYVVEKVGSVSTMIVERLQQSQ-------LELSEAEATLLALGIHADT-GSLCYDSTTPRDAFALSWCMEQGASQAAIAEHVQSSLSVEQQGVLTQALINTNSTVIHGVTVSTVLLSADGFINGLAAVTQDALELSSSDVFLLAVVYDPKAGH 520          
BLAST of mRNA_Ecto-sp8_S_contig10602.948.1 vs. uniprot
Match: A0A7S4R7K6_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4R7K6_9STRA)

HSP 1 Score: 210 bits (535), Expect = 5.630e-56
Identity = 126/290 (43.45%), Postives = 180/290 (62.07%), Query Frame = 1
Query:  610 YNVVLTHLSADFDSLAAAVGVAKLWNAEDRKAS-------------------VPTYVVLPRGAHPSVSKFLALHQELFPILGLELL--DPTGARKVGMCDAQTRDRVGPASELLDQAESVHVYDHHVDKDSDIVDAVLHI-ESVGAATTVVTEMIRSGLEKGAGVGLQLTEAESTLLALGIHADTAGSLTYDSATARDAAALAWLMMQGCQQTVVSEYTHTSLSEGQQSSLVEAFGSLEKRQHNGVSVGSVLLVNEERVAGMARSGPSSFRLTCVILFFPSDCHDDEIGR 1413
            +NVVLTH +ADFDSLA+AVG+AKLW++  + +S                   +PT+VVLPRGAHP+V KFL+LH+ LFPI  L+ L  D +G  ++G+ DAQ RDR+GPA  LL  A+ V V DHH+D ++DI +A  ++ E VG+ +T++ E ++          L+L+EAE+TLLALGIHADT GSL YDS T RDA AL+W M QG  Q  ++E+  +SLS  QQ  L +A  +      +GV+V +VLL  +  + G+A     +  L+   +F  +  +D + G 
Sbjct:  239 FNVVLTHCTADFDSLASAVGLAKLWSSSPKGSSXXXXXXXXXXXXXKNKQKVIPTFVVLPRGAHPAVQKFLSLHKHLFPIRSLKSLPSDLSGLHRLGLVDAQRRDRIGPAEHLLSYAKRVTVVDHHIDGETDIPEATDYVVEKVGSVSTMIVERLQQSQ-------LELSEAEATLLALGIHADT-GSLCYDSTTPRDAFALSWCMEQGASQAAIAEHVQSSLSVEQQGVLTQALINTNSTVIHGVTVSTVLLSADGFINGLAAVTQDALELSSSDVFLLAVVYDPKAGH 520          
BLAST of mRNA_Ecto-sp8_S_contig10602.948.1 vs. uniprot
Match: A0A1Z5JWQ6_FISSO (tRNA nucleotidyltransferase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JWQ6_FISSO)

HSP 1 Score: 206 bits (523), Expect = 2.790e-55
Identity = 123/277 (44.40%), Postives = 173/277 (62.45%), Query Frame = 1
Query:  586 LLVSRGQPYNVVLTHLSADFDSLAAAVGVAKLWNAE-----------DRKASVPTYVVLPRGAHPSVSKFLALHQELFPILGLELLDPTGAR--KVGMCDAQTRDRVGPASELLDQAESVHVYDHHVDKDSDIVDAVLHIESVGAATTVVTEMIRSGLEKGAGVGLQLTEAESTLLALGIHADTAGSLTYDSATARDAAALAWLMMQGCQQTVVSEYTHTSLSEGQQSSLVEAFGSLEKRQHNGVSVGSVLLVNEERVAGMARSGPSSFRLTCVILF 1377
            L +   + YNVVLTH +ADFDSLA+AVG+AKLW+AE           D  + VPTYVVLPRGAHPSV +FL+LH+ LFPI  L+ L     R  ++ + DAQ ++R+ PA  LL+ A+ + V DHHVD+DSDI      ++ VG+ TT++ E ++          + LTEAE+TLLALGIHADT G+L +D+ T RDA +LAW + QG  QT ++E+ ++ LS  QQS L  A   +     NGV++ +VLL  +  + G+A     +  L+   +F
Sbjct:   93 LSLDPSKGYNVVLTHSTADFDSLASAVGLAKLWSAEAVPTSSDVKSFDSASHVPTYVVLPRGAHPSVQRFLSLHKHLFPIRSLKSLPSPAGRLNRLALVDAQRKERLIPAEGLLEHAKRITVVDHHVDQDSDIAADDYVVDKVGSVTTLIAERLQQQQ-------VLLTEAEATLLALGIHADT-GNLCFDNTTPRDAYSLAWCLSQGASQTAIAEHVNSPLSPEQQSVLTRALLHVNTTVVNGVTISTVLLQADAFIQGLAAVTQDALELSSSDIF 361          
BLAST of mRNA_Ecto-sp8_S_contig10602.948.1 vs. uniprot
Match: A0A7S2XP97_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XP97_9STRA)

HSP 1 Score: 202 bits (514), Expect = 2.300e-54
Identity = 125/297 (42.09%), Postives = 176/297 (59.26%), Query Frame = 1
Query:  610 YNVVLTHLSADFDSLAAAVGVAKLWNAE---------------------------DRKASVPTYVVLPRGAHPSVSKFLALHQELFPILGLELL--DPTGARKVGMCDAQTRDRVGPASELLDQAESVHVYDHHVDKDSDIVDAVLHI-ESVGAATTVVTEMIRSGLEKGAGVGLQLTEAESTLLALGIHADTAGSLTYDSATARDAAALAWLMMQGCQQTVVSEYTHTSLSEGQQSSLVEAFGSLEKRQHNGVSVGSVLLVNEERVAGMARSGPSSFRLTCVILFFPSDCHDDEIG 1410
            +NVVLTH +ADFDSLA+AVG+AKLW+ E                           D  + VPT+VVLPRGAHP V +FL+LH+ LFPI  L  L  D +G  ++G+ DAQ RDR+GPA  LL  A+ V V DHH+D ++DI +A  ++ + VG+ +T+V E +++         ++L+EAE+TLLALGIHADT GSL +DS T RDA ALAWLM  G  Q  ++E+  +SLS  QQ  L +          +GV+V +VLL  +  + G+A     +  L+   +F  +  +D + G
Sbjct:  101 FNVVLTHCTADFDSLASAVGLAKLWSTEARPNNDNPTTSADDDGSLDNNINNSEYDSSSHVPTFVVLPRGAHPGVQRFLSLHKHLFPIRSLRSLPEDLSGLNRLGLVDAQRRDRIGPAEPLLSWAKRVTVVDHHMDSETDIPEATDYVVDQVGSVSTMVAERLQAAQ-------IELSEAEATLLALGIHADT-GSLQFDSTTPRDAKALAWLMEGGASQAAIAEHAQSSLSPEQQGVLTQTLIHTNSTLVHGVTVSTVLLTADGFINGLAAVTQDALELSSSDVFLLALVYDAKSG 389          
BLAST of mRNA_Ecto-sp8_S_contig10602.948.1 vs. uniprot
Match: A0A7S1FU56_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FU56_9STRA)

HSP 1 Score: 196 bits (497), Expect = 1.380e-52
Identity = 129/310 (41.61%), Postives = 179/310 (57.74%), Query Frame = 1
Query:  610 YNVVLTHLSADFDSLAAAVGVAKLWNAE------DRKAS--------------------------------VPTYVVLPRGAHPSVSKFLALHQELFPILGLELLDPTGARK--------VGMCDAQTRDRVGPASELLDQAESVHVYDHHVDKDSDIVDAVLHI-ESVGAATTVVTEMIRSGLEKGAGVGLQLTEAESTLLALGIHADTAGSLTYDSATARDAAALAWLMMQGCQQTVVSEYTHTSLSEGQQSSLVEAFGSLEKRQHNGVSVGSVLLVNEERVAGMARSGPSSFRLTCVILFFPSDCHD 1398
            +NVVLTH  ADFD+LA+AVG+AKLW+++      DR+ S                                +PTYVVLPRGAHP+V ++L++H+ LFPI GL+ L P G  K        +G+ DAQ RDRVGPA  LL  A  V V DHH+DK+SDI +A  ++ E VG+ +T+V E +R+         +QLTEAE+TLLALGIH+DT GSL + S TARDA+ALA++M +G  Q  ++E+    LS+ QQ  L +A   +     +GV+V +VLL  E  V G+A     +  L+   +      +D
Sbjct:   78 FNVVLTHCYADFDTLASAVGLAKLWSSKRELRRLDRRQSNTDGFEEEERGEREXXXXXXXXXERQDFEQGVIPTYVVLPRGAHPAVQRYLSMHKHLFPIRGLKSL-PAGTPKGLESRLHRLGLVDAQRRDRVGPAEHLLSYANHVTVVDHHIDKESDIPEATDYVVEPVGSVSTMVVERLRAAR-------VQLTEAEATLLALGIHSDT-GSLCFGSTTARDASALAYVMRRGASQAAIAEHAPRRLSKEQQEVLTQALIGVNSTVVHGVTVSTVLLHTEGFVDGLAAVTQDALELSSTDIMLLGAVYD 378          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig10602.948.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JE63_9PHAE1.840e-24886.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LJV0_ECTSI4.920e-16297.69Polynucleotide adenylyltransferase region n=1 Tax=... [more]
A0A835YMN8_9STRA8.410e-6949.44Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D8LQ45_ECTSI3.260e-6047.04Phosphoesterase, RecJ-like protein n=2 Tax=Ectocar... [more]
W7U1M5_9STRA4.850e-5946.90Polynucleotide adenylyltransferase region n=2 Tax=... [more]
A0A7S4V3V2_9STRA2.540e-5743.45Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S4R7K6_9STRA5.630e-5643.45Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A1Z5JWQ6_FISSO2.790e-5544.40tRNA nucleotidyltransferase n=2 Tax=Fistulifera so... [more]
A0A7S2XP97_9STRA2.300e-5442.09Hypothetical protein (Fragment) n=1 Tax=Attheya se... [more]
A0A7S1FU56_9STRA1.380e-5241.61Hypothetical protein (Fragment) n=1 Tax=Corethron ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig10602contigEcto-sp8_S_contig10602:240..6771 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score478.0
Seed ortholog evalue4.6e-132
Seed eggNOG ortholog2880.D8LJV0
Model size1416
Hectar predicted targeting categorysignal peptide
Exons7
EggNOG free text desc.DHH family
EggNOG OGs2R7NG@2759,COG0618@1
Cds size1284
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig10602.948.1prot_Ecto-sp8_S_contig10602.948.1Ectocarpus species8 EcLAC_412polypeptideEcto-sp8_S_contig10602 372..6771 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681143158.1607587-UTR-Ecto-sp8_S_contig10602:239..3711681143158.1607587-UTR-Ecto-sp8_S_contig10602:239..371Ectocarpus species8 EcLAC_412UTREcto-sp8_S_contig10602 240..371 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681143158.1777842-CDS-Ecto-sp8_S_contig10602:371..8001681143158.1777842-CDS-Ecto-sp8_S_contig10602:371..800Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig10602 372..800 +
1681143158.190631-CDS-Ecto-sp8_S_contig10602:1432..15791681143158.190631-CDS-Ecto-sp8_S_contig10602:1432..1579Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig10602 1433..1579 +
1681143158.1997268-CDS-Ecto-sp8_S_contig10602:1850..19641681143158.1997268-CDS-Ecto-sp8_S_contig10602:1850..1964Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig10602 1851..1964 +
1681143158.2175856-CDS-Ecto-sp8_S_contig10602:3482..36311681143158.2175856-CDS-Ecto-sp8_S_contig10602:3482..3631Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig10602 3483..3631 +
1681143158.2295127-CDS-Ecto-sp8_S_contig10602:4381..45091681143158.2295127-CDS-Ecto-sp8_S_contig10602:4381..4509Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig10602 4382..4509 +
1681143158.2391124-CDS-Ecto-sp8_S_contig10602:6189..62581681143158.2391124-CDS-Ecto-sp8_S_contig10602:6189..6258Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig10602 6190..6258 +
1681143158.2489822-CDS-Ecto-sp8_S_contig10602:6523..67711681143158.2489822-CDS-Ecto-sp8_S_contig10602:6523..6771Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig10602 6524..6771 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp8_S_contig10602.948.1

>prot_Ecto-sp8_S_contig10602.948.1 ID=prot_Ecto-sp8_S_contig10602.948.1|Name=mRNA_Ecto-sp8_S_contig10602.948.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=428bp
MAKGATCGYLRRICNAVLVLQLGVLGQASNSQVVRVSRAVSRSRGSSKKG
GAFVGLLAAPLAWRHRCHKLGTHPAGRNGIARLALPAAACSPEGSSALSA
TRPGSELPEEVQYGFWAPASKELHRDQWAPPASKKARFGGPSHSASGRLG
GLLVSRGQPYNVVLTHLSADFDSLAAAVGVAKLWNAEDRKASVPTYVVLP
RGAHPSVSKFLALHQELFPILGLELLDPTGARKVGMCDAQTRDRVGPASE
LLDQAESVHVYDHHVDKDSDIVDAVLHIESVGAATTVVTEMIRSGLEKGA
GVGLQLTEAESTLLALGIHADTAGSLTYDSATARDAAALAWLMMQGCQQT
VVSEYTHTSLSEGQQSSLVEAFGSLEKRQHNGVSVGSVLLVNEERVAGMA
RSGPSSFRLTCVILFFPSDCHDDEIGRA
back to top

mRNA from alignment at Ecto-sp8_S_contig10602:240..6771+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp8_S_contig10602.948.1 ID=mRNA_Ecto-sp8_S_contig10602.948.1|Name=mRNA_Ecto-sp8_S_contig10602.948.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=6532bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10602:240..6771+ (Ectocarpus species8 EcLAC_412)
GTACGTACTACTTGTGCCGGGTATTGGGTGCTCGCAGCTCGGCAGTGATT CTCGACAGAGGCCTCCTCAGCTTGAGCACAATCAGTGCAGTGAGAACGAC GGGAGAGATCGCCTCGTCGCGTGGTCCAACACATGGCAAAAGGTGCAACA TGTGGGTATCTCCGCCGTATATGTAATGCCGTCCTCGTACTGCAACTTGG TGTCCTTGGCCAAGCTTCAAACTCGCAAGTAGTGCGAGTCTCCCGTGCGG TCAGTCGGAGCAGAGGCAGCAGCAAGAAGGGTGGTGCGTTTGTTGGCTTG CTGGCCGCACCGTTGGCATGGCGACATCGGTGCCATAAACTCGGCACGCA CCCGGCAGGCCGCAACGGGATTGCGAGACTAGCCCTACCGGCAGCGGCGT GTTCGCCAGAAGGATCGTCGGCGTTATCTGCTACCAGACCGGGATCGGAA CTGCCCGAAGAGGTGCAGTACGGCTTTTGGGCACCGGCGTCGAAAGAGCT GCACCGCGACCAGTGGGCACCGCCGGCATCGAAGAAAGCACGATTCGGCG GCCCTTCGCATGTAAGCAGTAGACGGTGTCGTCCACGAGAAACCAGTTGC AGAGGCAGCGGGACTGTGGGAATAAAACCACATCATTGATTAGCGAGCGG CCGAGTTCCTTCGGGCGGATAGTATTCGGGCGTAGACTACACACCGCAGA GTAGTTCTTCTGCGTGTGACGTCGGATTGGAGGTCTAACGTGAGAGAGGC CGTAAGGCCGCACGGGTACTGGTGGTGCAGTTGCAAGCTGTGGGCGATGG TGAATCAAAGGACATGACTAATATTCCAAGTGCAAGTCCGGGAAGCAGTT AGAGGTACTGGCTGGTTGGATGCCGTCAGGGCGTACCCTGGACCCTGGTC AATAGTAACGCAGCGCTTCCTCCCGACAAACCGCGACCCAGCTGTCGTCG ATAAATACGTTGTGCAACCTGTTGAGAGGTTAGGTGCACGCTAAGATGAA CGTGAGACAGGCCAACCGCCAACTAAGCCCCCCCGCCGGCCAAAGCGACA CATCAATTTTTGTGTCCCTGTATTAGGGAGTATTGAAGAATTCATAACAA TAGACAACAGGCGTCGCGCCCCCGAGACTCATGGTCCATTGTTCGGTGTT CTTCTCCTCCTCTCTCCCTTGTTTGATTGTGCACGGCCCACAGTCCGCCT CGGGGCGGCTAGGCGGGTTGCTGGTGAGCCGCGGTCAGCCGTACAACGTC GTGCTCACGCACCTGTCGGCCGATTTTGATTCCTTAGCCGCCGCGGTGGG AGTTGCCAAGCTGTGGAACGCAGAAGACCGAAAGGCGAGTGTTTTTTTTC TCCTCATTTGCTACCTATTGGCAAATGACGTTCTGCGTTTGTTCCTCCAA TTTGACAATAGCAGCAGCAGCAGCAGCAGCAGCAGCAAGCGATGGCCGCC TCAAATCGACACACCCTCTCAACTTTTCAAACGCGGGAACAGTAGTAGCA CGCGGTGTCCGCCTCGAATCGACAAGCTCTCAGCTTTCAACAGCCGGAAT CAAAACTGCCGTCGTTGCGGTGCGCTCGTTCGTTACGGTTCGTTCTGTAA CCGTCGTACAGGTTCCGACGTACGTGGTTCTCCCGCGAGGAGCTCATCCG TCAGTGTCCAAGTTCTTGGCATTGCATCAGGAGCTCTTCCCCATCCTGGG GCTAGAGCTGCTGGACCCGACAGGGGTAAGTTTCGTAGCAGGCGTGGGGG GAGCGGGGAAGGGGGGGGGTGATGCTTTCCCTAAAGTGTCGGGTCAATTT GACTGCTCGTCGGCTCGGAAACACAGTCCGGCGAGGGAGGGTACGGTGAG GGAAGGGAGCCGCCATACAAGCGAACATGGGCTTGATCTAGAGCCCCCAT CGCCATCCTTGTGCCGTGCACTGCCTTGTGCTACGACGTTACCTTGATTG GAGAGAACGAAATGGTTGCTAGCAATTGAATAAAACCAAGGCGGACGGAA TGATGTGTTTGATACAACACCAGTATAGTAGAAATCGCAAAAGACTGTTC ATGGAATGCACACACGTCCAAGGTAGCGGAAAAAGGGTCAACCACGAGCA GGGAAGCTGCACCCAATACTCGCAAACATGCACCTCGATGCACGCATCAA ATAGAACGTTTTTATAATAGCGTAATCCTACCGCCGCTAGAGTGCGCAGG AGAAGTATGGGAAGGTACTAAGAAGGTAGTCAAAAGAGCTCGAGGCGGCC CAGATGAAAACAGCGAAAATCATCCTAGGATGCTCAAAGCGCACAAGTAT TGTAGCCGTCAGGGCAGAAGTGGGGATCCAATCCCCACGATCGGGAAGAG ATGTAAGGAAGCTGACATGGCAGTATCGCATGTGCGGTATGGGAGAGGAG AGGTTGCCGAGAATAGCTTAGGAGGCGAATTGGGCAAAGAAGAAGAGGGG TAGACAACCTACGGAGAGGGTCAAGGTTGTAGACGACGTATGGAAGGAGT TGGAAATTGACGAAACGGACGGTCTAGAGGGGTTCAAGGAGAAGATATCT GTTGCTTTTGCCCGAGAAAGAAAAACAGAATCTAATCAATGAACCAAGGA TAAGGAGGGTCTAGATATGTACGGAATTTTAAAGAAGGAATAGGGTTCAA GGATTGCCTACATGGACCAATGGATGCAGGTACAAAGCTCAAGGTCAAAT TTAGGACCGGGGATCTTGACCTTCAAGAACGTCGACGAAGACATAGGAAA GTAGACGATGAAGACGACCAGTTCAAATGTGAATGCGACTCCGAGTGCGA AGACCGGCTTCATGTGGTTGCGGAATGTCCGTTGTACAAGAGAAGGAGAG GAAAGTGTACACGACTGAGCTGGGAAATGTAGAAGGAAGATACAGGGAGA TGTTTGAGGCATCGAACAGCCAGGAGAAGAAGGTAGCTGTGCTGGGGCAT CGGAAGTGGGTTTGAAAAGGCGGGAAGTGTATCGATAGGATAGATAGGCT TAGGGAAACGTTTTTGAGCCACCGTTGGCGAAGTAGGAACGATTGGCCAT TGGTGATCGGTCCTGTGGGAACAATGCTCCGTCCTCTCGAACACACTTGG TCAATGGTCTAACCGCCGAGGCATGCAAAACATAAGAGTACCCCCCCCCC CCCCCCCCTATTTACTTACTGCCATTAACGACATACTGCTGATGTCCCGG GCTGCTGCTGTTGCGTCCGCCCTTCCTTCCCTTCTTACGGCAGGCTCGGA AGGTAGGGATGTGTGATGCGCAGACGCGAGATCGTGTGGGGCCAGCGAGT GAGCTCCTGGACCAGGCGGAGAGCGTCCACGTGTACGATCACCACGTGGA CAAGGACTCGGACATCGTCGACGCTGTCCTCCACATCGAGAGGTGGGCGT GCTTGCTGTCGTGGGACACCTTTCGCTGTTGCTGTTTCTGTTGCTGTCTC TGTAGGTTGTTGTGGTGGCGGTGGTGGTTTTTACATCTGTTGCTGCTGCT GTTGCTGCTGTTGTTTTTATTTGTCGTATTGTTCTCGTCGTCGGGATGAA ACGGATGGACCTGGTGTCCGTGAGGCAACCACTTCCTCCTTCCTCTCAGC AGCATCGTTCTCGCCAGGGAATTTTCGCGATCGACGATTTTCCGCTGATC GAAACACAAAAAAGGCGAAGAAACGAGAGTCCAGGTCGCACCACTCCTCA CACTCTCAGACCCGACCTTGTCGTTTCTCTCTCTCTCTCTCTGTGTGTCT ATGTGTCTCTCTCTCTCGTTCTCTCACTGTCCCTGTCTCTGCCTCTGTCT CTCACTGTCCCTGTCTCTGTGCCTCTGTCTCTCGCTGTCTGTCTCTCTGT CTCTCTGTCTCTCGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT CTCTCTCTCTCTCTTTCTATCTCTGTCTCTGTCTGTCTCTCTGTCTCTCT CTCTCTCTCTCTCTTTCTATCTCTGTCTCTGTCTCTGTCTCTGTCTGCCT CTCTCTCTCTCTCTCTCTATCTCTCTCTCTCTCTGTCTCTCTGTTTCTGT CTCTCTCTCTCTATCTCTCTGTCTCTCTGTCTCTCTCTCTCTCTCTCTCT CTCTGTCTCTCTGTCTCTGTCTTTTTTTCTTTCTCTTTCCAGCGTGGGTG CGGCAACGACGGTGGTGACGGAGATGATCCGGTCGGGTCTCGAGAAAGGA GCCGGGGTCGGACTTCAGCTTACGGAGGCGGAGAGTACGCTCCTTGCTCT GGGCATTCATGCGGACACAGGTGACGTTTTTCGCCGTAGGTTGTCGGGTA GCTTGTTCTCTTCTTTTTTGTTTTGTTGTAACACAACGAGTTCGTCTCTC TCCACGGATAAGAGTTAATCTCTATCCACGGATAAGAGTTAATCTCTATC CACAGATAAGAGTTAATCTCTCTCCTAAGAGTTAATCTCTATCCACAGAT AAGAGTTAATCTCTCTCCACAGATAAGAGTTAATCTCTCTCCAGAGATGA GAGTTAATCTCTCTCCAGAGATAAGAGGTAATCTCTCTCCACAGATAAAG AGTCCATCTGTATCCACAGATAAAGAGTTAATCTCTCTCCACAGATAAGA GTTAATCTCTCTCCAGAGATAAGAGTTAATCTCTATCCAGAGGTAAGAGG TAATCTCTCTCCAGAGATAAGAGTTAATCTCTATCCACAGATAAGAGGTA ATCTCTGTCCACAGATAAGAGTTCATCTCTGTCCACAGATAAGAGGTAAT CTCTGTCCACAGATAAAGAGGTAATCTCTCTCCAGAGGTAAGAGGTAATC TCTCTCCAGAGATAAGAGTTAATCTCTATCCACAGATAAGAGGTAATCTC TCTCCACAGATAAGAGTTCATCTCTGTCCACAGATAAGAGTTCATCTCTG TCCACAGATAAGAGTTCATCTCTGTCCACAGGTGAGAGGTAATCTCTGTC GACAGTTTTTTTCCCGGGATTTATTTCCAGCAACCTGTGGTTGAAAGCGA TCTTTGGTCGTGAGTAAACAAACTTCGGCTTCAGGGTTGACGAGGGAAAG GGATGGCTGAACCCTTCTCGCGATACAAACTAAGGCAAGCACCGCAGGGG TAAAGGTGGGGCAACAAAACAAAACAAAAAGAAGGAAAAAAAGGTTCTGT GTGACCTGCCTCTTGTGTGACCCCGCCTGATAAATCAGTTATATTCGCCG AAAGGCCAGTAAACCGGCGCAGAATAGATGGGATGAATACACACACAGAT GAGAGTCCATCTCTATCCACAGATAAGAGGTAATCTCTATCCACAGATAA GAGGTAATCTCTCTCCACAGATAAGAGTTCGGGAGAATTAGCAACGAATC CATAGCATTATTAGTGGGGAACTCGCCATAATATAGTATGCATGTAGTAC AGTATGAATATGATACCTTTGTTTCCACGATTCCCGAGCAGCATACAACA ACTACAGTGTATTTCCTTCTTTTTTTTTACTTTTCGCCACGATCGGGTGA AACGCAACATGCCGCTCGCTCGGCCGATAGGTTGTACGTACACCCGACGA GGGTGTTCTTGTTTCGAAGAAGTACCTGTAACAATGTAGTAGTGGCATGG TTTTTCTTTCTGTCTCGCACACGTCACGAAACGGCGCGACATGAATACAC CTCACCTCCATCTAGGACGATGTGGGCCATCTTGTGGATATAACGCGAAC TTCGGCGTTACCGAGCTCTACATTGCGTCCCCAAAATTGAAAATTAGTAT TTACCTATAACATAATAATATCTTGTTTCAGCAGCCGGGTAGCCCTATGT ACCCCTATTGGTTCCATTGTAAACTTACACCCGAAAATAGTCGAAAGGCT CAACAACATGCGCGGTCCAATGGGCCAGCGATCATGACGTGCCCCTTCGT ACGTTCGTTTTCCTTCTGTTTTTGTTCTTTCCTGTCTTTTTTTTTGTGAG CAGGGTCGTTGACGTACGATTCTGCGACGGCGCGGGACGCAGCCGCCCTG GCGTGGCTCATGATGCAAGGTTAGTGAGGTGCAGCAGTGACCAATCGGTG ATATTGGATGCGGTATATGTTCCCTTCGGTGCATCGGTGGTTTGTTGTCT TTTGGTATCTCTCGTCGTCACGGTGCTTGTCGCGAGGAGTGAAGAGTCTC AACCTTTCGTCAAGCGAGGTACAGCAGTTTATGCGTAAGAATGATGGATG GATGGTGGATGGCGTCCGCTCTTTTTGTTGGTCGCGCTTTCCACGACAAC GCACAAACTCCCGTCCTCCGCGCGCGCGTTGCAGGCTGCCAGCAAACGGT GGTGTCCGAGTACACGCACACGTCACTGTCGGAGGGGCAACAGTCTTCCC TCGTGGAGGCCTTCGGGTCCCTCGAGAAACGGCAACACAACGGCGTCTCG GTCGGCAGCGTGCTCCTCGTTAACGAGGAAAGGGTTGCCGGCATGGCCAG GTCAGGTCCGAGTTCATTTAGATTAACGTGTGTGATTTTGTTTTTTCCAT CAGACTGCCATGATGATGAGATCGGAAGAGCA
back to top

Coding sequence (CDS) from alignment at Ecto-sp8_S_contig10602:240..6771+

>mRNA_Ecto-sp8_S_contig10602.948.1 ID=mRNA_Ecto-sp8_S_contig10602.948.1|Name=mRNA_Ecto-sp8_S_contig10602.948.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=1284bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10602:240..6771+ (Ectocarpus species8 EcLAC_412)
ATGGCAAAAGGTGCAACATGTGGGTATCTCCGCCGTATATGTAATGCCGT
CCTCGTACTGCAACTTGGTGTCCTTGGCCAAGCTTCAAACTCGCAAGTAG
TGCGAGTCTCCCGTGCGGTCAGTCGGAGCAGAGGCAGCAGCAAGAAGGGT
GGTGCGTTTGTTGGCTTGCTGGCCGCACCGTTGGCATGGCGACATCGGTG
CCATAAACTCGGCACGCACCCGGCAGGCCGCAACGGGATTGCGAGACTAG
CCCTACCGGCAGCGGCGTGTTCGCCAGAAGGATCGTCGGCGTTATCTGCT
ACCAGACCGGGATCGGAACTGCCCGAAGAGGTGCAGTACGGCTTTTGGGC
ACCGGCGTCGAAAGAGCTGCACCGCGACCAGTGGGCACCGCCGGCATCGA
AGAAAGCACGATTCGGCGGCCCTTCGCATTCCGCCTCGGGGCGGCTAGGC
GGGTTGCTGGTGAGCCGCGGTCAGCCGTACAACGTCGTGCTCACGCACCT
GTCGGCCGATTTTGATTCCTTAGCCGCCGCGGTGGGAGTTGCCAAGCTGT
GGAACGCAGAAGACCGAAAGGCGAGTGTTCCGACGTACGTGGTTCTCCCG
CGAGGAGCTCATCCGTCAGTGTCCAAGTTCTTGGCATTGCATCAGGAGCT
CTTCCCCATCCTGGGGCTAGAGCTGCTGGACCCGACAGGGGCTCGGAAGG
TAGGGATGTGTGATGCGCAGACGCGAGATCGTGTGGGGCCAGCGAGTGAG
CTCCTGGACCAGGCGGAGAGCGTCCACGTGTACGATCACCACGTGGACAA
GGACTCGGACATCGTCGACGCTGTCCTCCACATCGAGAGCGTGGGTGCGG
CAACGACGGTGGTGACGGAGATGATCCGGTCGGGTCTCGAGAAAGGAGCC
GGGGTCGGACTTCAGCTTACGGAGGCGGAGAGTACGCTCCTTGCTCTGGG
CATTCATGCGGACACAGCAGGGTCGTTGACGTACGATTCTGCGACGGCGC
GGGACGCAGCCGCCCTGGCGTGGCTCATGATGCAAGGCTGCCAGCAAACG
GTGGTGTCCGAGTACACGCACACGTCACTGTCGGAGGGGCAACAGTCTTC
CCTCGTGGAGGCCTTCGGGTCCCTCGAGAAACGGCAACACAACGGCGTCT
CGGTCGGCAGCGTGCTCCTCGTTAACGAGGAAAGGGTTGCCGGCATGGCC
AGGTCAGGTCCGAGTTCATTTAGATTAACGTGTGTGATTTTGTTTTTTCC
ATCAGACTGCCATGATGATGAGATCGGAAGAGCA
back to top