mRNA_Ecto-sp8_S_contig1060.945.1 (mRNA) Ectocarpus species8 EcLAC_412
|
Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig1060.945.1 vs. uniprot
Match: D8LN48_ECTSI (Fibronectin type-III domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN48_ECTSI) HSP 1 Score: 1297 bits (3357), Expect = 0.000e+0 Identity = 802/967 (82.94%), Postives = 819/967 (84.69%), Query Frame = 1
Query: 97 ITPNHGDFQQASPDPQVSAGSPGSTSSLRVSWDTDADRAAPKILGYELQYAVAGRSGGSDDTIASWKSAEGNTHDTWDITIQVDGFDRSIGRKHMVEDGWFTLALSRAYPKPSSLPDLWLGTEPIGWDDTWADMEAKVQKTLRESGHPQYSSWTATVVRCDETEERGGNHWAGGCRFLEYGGFTWHLRLSPPPRDASTTREDFPVVTVTKETITAKWSGDGDQVVSERFGDHSQSGGEYSAHEEDLGRTNLIDPFFCRRGSCERMLEGLAAVTPYLVRLRAYNQNGFGPWVSSTTDMSVGTTGG-AAGISTNTVPVTPAPKAPQLSSSTPTSLTVFVDTASTTGVAEIEAYEFEVQRHEDDGYRGDTTRWIPVSTHADDIDSDAAVPLTTATELSPSSSYRFRVRARHSNGLSLVSGHTTPIATGLGLPTPSPLAPTVDVTSTTSSTMAVKWSSWAPAGVEYSSFEAQWERLGSGYWQNASTITRDRGSQEEWRATAEGLEAYSQHRFRVRAVNAAGAGEWSAASDWARTEGDPSTTAGVDGFEAEAVDSDIPASVLLSVSGEGQTPGHAKDFDYYHGVGVGGQVSLSGQGGDGGPGAAVIVSRIPGVPLPSRSSFFFTGAPELYAVPSHSGVTSVTLKLWGAGGGGVLTPVAAAGAPGDNETSNATQVLGGGGGFLQVEVKVSPGEMLEVLVGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVRGTDGGSPALDQVAVNTGGGGECQNGWCSASEADAVSYEGIENWVTTGGSGGSTVQGGLGGKSDVFDWVDGGGGRQGAVSSPRSGESSMPIVFRGTGSRPATPGRSLTGGIGANGARGXXXXXXXXXXXXXXXXXXXXXXXXXXSSHADTGALALDHGTNEWGSGGEDGVRVVEVGESWVEVEWRTVVGAVAGEQPMFYEV 2994
I PNHGDFQQASP+PQVSAGSPGSTSSL+VSWDT ADRAAPKILGYELQYAVAGR+GGSDDTIASWKSAEGNTHDTWDITIQVDGFDRSIGRKHMVEDGWFTLALSRAYPKPSSLPDLWL TEPIGW++TW DMEAKVQKTLRES HPQYSSWTA VVRCDETEERGG HWAGGCRFLEYGGFTWHLRLSPPP DAS TREDFPVVTVTKETITAKWSGDGDQVVSERFGDHSQSGGE SAHEEDLGRTNLIDPFFC+RGSCERMLEGLAA TPYLVRLRAYN+NGFGPW+SSTTDMSVGTTGG AAGISTNTVPVTPAPKAP+LSSSTPTSLTVFVDTASTTG AEIEAYEFEVQRHEDDGY GDTTRWIPVSTHADD +SDAAVPLTTATELSPSSSYRFR + G +V G TG RGSQEEWRATAEGLEAYSQHRFRVRAVNA GAGEWSAASDWART+GDPSTTAGVDGFEAEAVDSDIPASVLLSVSGEGQTPGHAKDFDYYHG+GVGG+VSL GQGGDGGPGAAVIVSRIPGVPLPSRSSFFFT VLGGGGGFLQ EVKVSPGEMLEVLVG XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX VRGTDGGSPALDQ+ VNTGGGGECQNGWCSASEADAVSYEGIENWVTTGGSGGSTVQGGLGGKSDVFDWVDGGGGRQGAVSSPRSGESSMPIVFRGTGSRPATPGRSLTGGIGANGARGXXXXXXXXXXXXXXXXXXXXXXXXXXSSHADTGALALDH TNEWGSGGEDGVRVVEVGESWVEVEWR VVGAVAGEQPMFYE+
Sbjct: 8 IAPNHGDFQQASPEPQVSAGSPGSTSSLKVSWDTVADRAAPKILGYELQYAVAGRTGGSDDTIASWKSAEGNTHDTWDITIQVDGFDRSIGRKHMVEDGWFTLALSRAYPKPSSLPDLWLDTEPIGWNETWVDMEAKVQKTLRESRHPQYSSWTAAVVRCDETEERGGKHWAGGCRFLEYGGFTWHLRLSPPPGDASATREDFPVVTVTKETITAKWSGDGDQVVSERFGDHSQSGGEDSAHEEDLGRTNLIDPFFCQRGSCERMLEGLAAATPYLVRLRAYNRNGFGPWMSSTTDMSVGTTGGGAAGISTNTVPVTPAPKAPKLSSSTPTSLTVFVDTASTTGAAEIEAYEFEVQRHEDDGYSGDTTRWIPVSTHADD-NSDAAVPLTTATELSPSSSYRFR----YDGGQVVVMG------TG-------------------------------------------------------------RGSQEEWRATAEGLEAYSQHRFRVRAVNAVGAGEWSAASDWARTKGDPSTTAGVDGFEAEAVDSDIPASVLLSVSGEGQTPGHAKDFDYYHGIGVGGKVSLDGQGGDGGPGAAVIVSRIPGVPLPSRSSFFFT-------------------------------------------------VLGGGGGFLQAEVKVSPGEMLEVLVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVRGTDGGSPALDQMVVNTGGGGECQNGWCSASEADAVSYEGIENWVTTGGSGGSTVQGGLGGKSDVFDWVDGGGGRQGAVSSPRSGESSMPIVFRGTGSRPATPGRSLTGGIGANGARGXXXXXXXXXXXXXXXXXXXXXXXXXXSSHADTGALALDHRTNEWGSGGEDGVRVVEVGESWVEVEWRAVVGAVAGEQPMFYEI 853
BLAST of mRNA_Ecto-sp8_S_contig1060.945.1 vs. uniprot
Match: A0A6H5JSC5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSC5_9PHAE) HSP 1 Score: 599 bits (1544), Expect = 1.120e-200 Identity = 358/612 (58.50%), Postives = 381/612 (62.25%), Query Frame = 1
Query: 208 RAAPKILGYELQYAVAGRSGGSDDTIASWKSAEGNTHDTWDITIQVDGFDRSIGRKHMVEDGWFTLALSRAYPKPSSLPDLWLGTEPIGWDDTWADMEAKVQKTLRESGHPQYSSWTATVVRCDETEERGGNHWAGGCRFLEYGGFTWHLRLSPPPRDASTTREDFPVVTVTKETITAKWSGDGDQVVSERFGDHSQSGGEYSAHEEDLGRTNLIDPFFCRRGSCERMLEGLAAVTPYLVRLRAYNQNGFGPWVSSTTDMSVGTTGGAAGISTNTVPVTPAPKAPQLSSSTPTSLTVFVDTASTTGVAEIE---------------------------------------------------------------AYEFEVQRHEDDGYRGDTTRWIPVSTHADDIDSDAAVPLTTATELSPSSSYRFRVRARHSNGLSLVSGHTTPIATGL---------------------------GLPTPSP---------LAPTVDVTSTTSSTMAVKWSSWAPAGVEYSSFEA-QWERLGSGYWQNASTITRDRGSQEEWRATAEGLEAYSQHRFRVRAVNAAGAGEWSAASDWARTEGDPSTTAGVDGFEAEAVDS 1743
RA + YELQYAVAGRSGGSDDT A+WKSAEGNTHDTWDITIQVDGFDRSIGR+HMVEDGWFTLALSRAYPKPSSLPDLWL TEPIGWDDTWADMEAKVQKTLRES HPQYSSWT VVRCDETEERGGNHWAGGCRFLEYGGFTWHLRLSPPP DAS TREDFPVVTVTKETITAKWSGDGDQ MSVGTTGGAAGISTNTVPVTP+PKAP+LSSSTPTSLTVFVDTAST G AEIE AYEFEVQRHEDDGYRGDTTRWIPV THADD +SDAAVPL TATELSP SSYRFRVRARHSNGLSLVSG + P TG G+ S +AP V++ T++T+AV ++ V+ S + Q +G+G RGSQE+WRATAEGLEAYSQHRFRVRAVNA GAGEWSAASDWARTEG PSTTAGV+GFEAEA+DS
Sbjct: 39 RALVLVCRYELQYAVAGRSGGSDDTFANWKSAEGNTHDTWDITIQVDGFDRSIGRRHMVEDGWFTLALSRAYPKPSSLPDLWLDTEPIGWDDTWADMEAKVQKTLRESRHPQYSSWTVAVVRCDETEERGGNHWAGGCRFLEYGGFTWHLRLSPPPGDASATREDFPVVTVTKETITAKWSGDGDQ-------------------------------------------------------------------------MSVGTTGGAAGISTNTVPVTPSPKAPKLSSSTPTSLTVFVDTASTAGAAEIEGKKRIISDISGGIPNTDRTRERNCHVSLGLFHFPRLPCFETVWPTPLLWFRFYRLASAVRTSQAYEFEVQRHEDDGYRGDTTRWIPVLTHADD-NSDAAVPLATATELSPFSSYRFRVRARHSNGLSLVSGVSEPFTTGKINVEHTKNGFTLALKQVVKGRRQMFHDGVSELSKERVHLCVLFVAPRVNLRPGTANTLAV--GAYCGRDVDNSQHDGGQVVVMGTG-----------RGSQEDWRATAEGLEAYSQHRFRVRAVNAVGAGEWSAASDWARTEGKPSTTAGVEGFEAEAIDS 563
BLAST of mRNA_Ecto-sp8_S_contig1060.945.1 vs. uniprot
Match: A0A7S3YIE4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YIE4_HETAK) HSP 1 Score: 68.9 bits (167), Expect = 2.070e-9 Identity = 48/108 (44.44%), Postives = 60/108 (55.56%), Query Frame = 1
Query: 1576 ATAEGLEAYSQHRFRVRAVNAAGAGEWSAASDWARTEGDPSTTAGVDGFEAEAVDSDIPASVLLSVSGEGQTPGHAKDFDYYHGVGVGGQVSLSGQGGDGGPGAAVIV 1899
AT +GLE Y+ +RFRVRAVN + GEWS ++ RTE P + FE E D P + V+G+G T +D DY HGV GG V G DGGPG VI+
Sbjct: 103 ATVDGLEPYTNYRFRVRAVNGSQYGEWSEPTETFRTE--PLLLQPLLSFEGEE---DPPTTGFELVAGDGATAPRTEDKDYVHGVAAGGGV-----GADGGPGMVVIL 200
BLAST of mRNA_Ecto-sp8_S_contig1060.945.1 vs. uniprot
Match: D0N9L9_PHYIT (Fibronectin type III domain-containing protein n=6 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0N9L9_PHYIT) HSP 1 Score: 66.6 bits (161), Expect = 2.980e-7 Identity = 170/737 (23.07%), Postives = 279/737 (37.86%), Query Frame = 1
Query: 142 QVSAGSPGSTSSLRVSWDT-----DADRAAPKILGYELQYAVAGRSGGSDDTIASWKSAEGNTHDTWDITIQVDGFDRSIGRK--------HMVEDGWFTLALSRAYPKPSSL---PDLWLGTEPIGWDDTWADMEAKVQKTLRESGHPQYSSWTATVVRCDETEERGGNHWAGGCRFLEYGGFTWHLRLSPPPRDASTTREDFPVVTVTKETITAKWSGDGDQVVSERFGDHSQSGGEYSAHEEDLGRTNLIDPFFCRRGSCERMLEGLAAVTPYLVRLRAYNQN--GFGPWVSSTTDMSVGTTGGAAGISTNTVPVTPAPKAPQLSSSTPTSLTVFV----DTASTTGVAEIEAY---EFEVQRHEDDGYRGDT-TRWIPVSTHADDIDSDAAVPLTTATELSPSSSYRFRVRARHSNG---LSLVSGHTTPIATGLGLPTPSPLAPTVDVTSTTSSTMAVKWSSWAPAG----------VEY-SSFEAQWERLGSGYWQNASTITRDRGSQEEWRATAEGLEAYSQHRFRVRAVNAAGAGEWSAASDWARTEGDPSTTAGVDGFEAEAVDSDIPASVLLSVSGEGQTPGHAKDFDYYHGVGVGGQVSLSGQGGDGG--------PG--AAVIVSRIP-GVPLPSRSSFFFTGAPELYAVPSHSG-------VTSVTLKLWGAGGGGVLTPVAAAGAPGDNETSNATQVLGGGGGFLQVEVKVSPGEMLEVLVGG 2178
+V+ G+P S +L VSW +A + YE+QYAV+G W+S G++ + + + + ++ + DG+F L LS PS L + T PI +D + A KT ES T V + + G W + Y G + P++++ ET++A+W+GDGDQV + S G + D C + GL + R+RA G+ W +S+ + + T PV AP P+L ++T + +T+ + G+ E + F+ Q+ D T + IP + SD V + + + P S+ FRV A ++NG SL S T + T G V + V W++ G VEY ++ + W RL + +S + + L+ Y+ + RVRAV AG +S ++++ T D D + ++ + Q A D+Y+ V L+G GG GG PG AV+V + P+ SFF+TG+ + Y VP + ++ + WGAGG G + A+ ++ SN GGGG F + +VS G+ +++LVGG
Sbjct: 58 RVAPGNPVSAYAL-VSWSAFDNALEASGGTASVEAYEVQYAVSGSG--------VWQSL-GDSLTGFRVDLGAQATEHVPKQRIFTRADDGESINDGYFRLGLSYEGSSPSILGGRATAGVVTPPIAFDAS-----ADAMKTAIES----LEQVTQVQVERNALDADGAFEWIILFDLVAYDG-----------------EDPLPLLSLYTETVSAQWTGDGDQVAVQYLRMAPSSPGRHRRICSD---------------ECSYQVTGLQTGRAFSFRVRAQYSYAIGWSSWSASSEPLEIPAT-----------PVPRAPSTPELLAATTSHVTISWRMRRELTQENGIFAREFFPVTSFQAQQQCDSEIGWTTISERIPPGFSGN---SDTFVTVVASLDRPPGSTCEFRVAATNANGQGPFSLPSAKFTTLQTAPGA---------VANLRVARDPLTVVWNTPEVLGGHAPEELTYDVEYRTTLGSTWTRLPAELVDCSSRLAN---------ISMTSLKGYTTYVTRVRAVAERQAGSFSQSAEFLADY-----TVEDDSNSDNVKDLTLGTRQVVIAAARQQC---ANTQDWYY-------VQLTGNGGSGGSTSGDEAKPGEHGAVLVFPVTWSGERPAEHSFFYTGSVQTYRVPIDQSAPHLAHRIVALDVYAWGAGGAGARSSNGAS-----SDLSN-----GGGGAFARGVFRVSAGDAVDILVGG 686
BLAST of mRNA_Ecto-sp8_S_contig1060.945.1 vs. uniprot
Match: A0A329SZ40_9STRA (Uncharacterized protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329SZ40_9STRA) HSP 1 Score: 63.5 bits (153), Expect = 2.570e-6 Identity = 168/732 (22.95%), Postives = 282/732 (38.52%), Query Frame = 1
Query: 142 QVSAGSPGSTSSLRVSWDT-----DADRAAPKILGYELQYAVAGRSGGSDDTIASWKSAEGNTHDTWDITIQVDGFDR--------SIGRKHMVEDGWFTLALSRAYPKPSSLPDLWLG---TEPIGWDDTWADMEAKVQKTLRESGHPQYSSWTATVVRCDETEERGGNHWAGGCRFLEYGGFTWHLRLSPPPRDASTTREDFPVVTVTKETITAKWSGDGDQVVSERFGDHSQSGGEYSAHEEDLGRTNLIDPFFCRRGSCERMLEGLAAVTPYLVRLRA-YNQN-GFGPWVSSTTDMSVGTTGGAAGISTNTVPVTPAPKAPQLSSSTPTSLTVFV----DTASTTGVAEIEAY---EFEVQRHEDDGYRGDTTRWIPVSTHADDIDSDAAVPLTTATELSPSSSYRFRVRARHSNG---LSLVSGHTTPIATGLGLPTPSPLAPTVDVTSTTSSTMAVKWSSWAPAG----------VEY-SSFEAQWERLGSGYWQNASTITRDRGSQEEWRATAEGLEAYSQHRFRVRAVNAAGAGEWSAASDWARTEGDPSTTAGVDGFEAEAVDSDIPASVL----LSVSGEGQTPGHAKDFDYYHGVGVGGQV-SLSGQGGDGGPGAAVIVSRIP--GVPLPSRSSFFFTGAPELYAVPSHSGVTSVTLKL-------WGAGGGGVLTPVAAAGAPGDNETSNATQVLGGGGGFLQVEVKVSPGEMLEVLVGG 2178
+V+ G+PGS ++L VSW +A + YE+QYAV+G +W+S G++ + + + D+ + + DG F L LS S + + T PI +D + M A ++ T V + + G F W + D + P++++ ET++A+W+GDGDQV + + D R D C + GL + R+RA Y+ + G+ W +S+ + + T + AP AP+ ++T + +T+ + G+ E + F Q+ D T R + + D+ + V + E P S+ FRV A + NG SL S T T G P +++ + V W + A G VEY ++ + W RL + S+ + L+ Y+ + RVRAV AG +S ++++ D E SD L ++++ Q + +D+ Y G GG S +G + G AV+V + G L R FFFTG + Y VP VT + L++ WGAGG G + A+ ++ SN GGGG F + ++V+ G+++++LVGG
Sbjct: 33 RVAPGNPGSAAAL-VSWSAFDNALEATGGTASVEAYEVQYAVSGSG--------AWQSL-GDSLTGYRVDLGAQATDQVPKQRIFTRVDAGETISDGDFRLTLSYEGSSQSLMGGRAMAGVVTPPIAFDASEDTMRAAIESL---------EQITKVQVLRNALDANGA--------------FEWVILFDSVAYDGE---DPLPLLSLYVETLSAQWTGDGDQVAVQYL--------RMAPSSPDQHRRICSD-------ECSYEVTGLQTGKAFTFRVRAQYSYDIGWSSWSASSEPLEIPATR-----------LPRAPSAPEFLAATTSHVTISWRMRRELTQENGIFAKELFPVTSFHAQQQCDSEIGWTTIRERVTPGFSGNSDTFSTV--VASLERPPGSTCVFRVAATNVNGQGPYSLASAKFTTFRTAPG--------PVLNL-RVLRDPLTVIWETPADLGGHTKEELTCDVEYRTTLGSTWTRL---------PVDLVDCSKRTANVSMASLKGYTAYVARVRAVVKRQAGSFSQSAEFL-----------TDYTVEEESSSDSKDFTLGTRQVAIAATRQHCANQQDWYYVQMTGNGGSGGSTNGVQAEPGENGAVLVFPVTWSGERLAERL-FFFTGGAQTYRVPVEQYVTHLALRIVALDIYAWGAGGAGARSSNGAS-----SDVSN-----GGGGAFARGVIRVNAGDVVDILVGG 660
BLAST of mRNA_Ecto-sp8_S_contig1060.945.1 vs. uniprot
Match: A0A1I2DY72_9DELT (Stigma-specific protein, Stig1 n=2 Tax=Nannocystis exedens TaxID=54 RepID=A0A1I2DY72_9DELT) HSP 1 Score: 62.4 bits (150), Expect = 3.510e-6 Identity = 33/85 (38.82%), Postives = 50/85 (58.82%), Query Frame = 1
Query: 1924 PSRSSFFFTGAPELYAVPSHSGVTSVTLKLWGAGGGGVLTPVAAAGAPGDNETSNATQVLGGGGGFLQVEVKVSPGEMLEVLVGG 2178
P +F FTGAP+++ VP V+++T++LWGA GGG L N TQ GG GG+++ ++ VSPG+++ VGG
Sbjct: 285 PGSQTFAFTGAPQMFTVPEC--VSTITVELWGAQGGGALC------------CDNTTQDDGGKGGYVKADLAVSPGDVIHTYVGG 355
BLAST of mRNA_Ecto-sp8_S_contig1060.945.1 vs. uniprot
Match: D0P3C3_PHYIT (Uncharacterized protein n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0P3C3_PHYIT) HSP 1 Score: 62.0 bits (149), Expect = 5.830e-6 Identity = 169/732 (23.09%), Postives = 281/732 (38.39%), Query Frame = 1
Query: 142 QVSAGSPGSTSSLRVSWDT-----DADRAAPKILGYELQYAVAGRSGGSDDTIASWKSAEGNTHDTWDITIQVDGFDRSIGRK--------HMVEDGWFTLALSRAYPKPSSL---PDLWLGTEPIGWDDTWADMEAKVQKTLRESGHPQYSSWTATVVRCDETEERGGNHWAGGCRFLEYGGFTWHLRLSPPPRDASTTREDFPVVTVTKETITAKWSGDGDQVVSERFGDHSQSGGEYSAHEEDLGRTNLIDPFFCRRGSCERMLEGLAAVTPYLVRLRAYNQN--GFGPWVSSTTDMSVGTTGGAAGISTNTVPVTPAPKAPQLSSSTPTSLTVFV----DTASTTGVAEIEAY---EFEVQRHEDDGYRGDT-TRWIPVSTHADDIDSDAAVPLTTATELSPSSSYRFRVRARHSNG---LSLVSGHTTPIATGLGLPTPSPLAPTVDVTSTTSSTMAVKWSSWAPAG---VEYSSFEAQWERLGSGYWQNASTITRDRGSQEEWRATAEGLEAYSQHRFRVRAVNAAGAGEWSAASDWAR--TEGDPSTTAGVDGFEAEAVDSDIPASVLLSVSGEGQTPGHAKDFDYYHGVGVGGQVSLSGQGGDGG--------PG--AAVIVSRIP--GVPLPSRSSFFFTGAPELYAVPSHSG-------VTSVTLKLWGAGGGGVLTPVAAAGAPGDNETSNATQVLGGGGGFLQVEVKVSPGEMLEVLVGG 2178
+V+ G+P S +L VSW +A + YE+QYAV+G W+S G++ + + + + ++ + DG+F L LS PS L + T PI +D + A KT ES T V + + G W + Y G + P++++ ET++A+W+GDGDQV + S + D C + GL + R+RA G+ W +S+ + + T PV AP P+L ++T + +T+ + G+ E + F+ Q+ D T + IP + SD V + + + P S+ FRV A ++NG SL S T + T G V + + V W++ G +E +++ ++ W D S+ + L+ Y+ + RVRAV AG +S ++++ T D S + V D + ++ + Q A D+Y+ V L+G GG GG PG AV+V + G L + SFF+TG+ + Y VP + ++ + WGAGG G + A+ ++ SN GGGG F + +VS G+ +++LVGG
Sbjct: 23 RVAPGNPVSAYAL-VSWSAFDNALEASGGTASVEAYEVQYAVSGSG--------VWQSL-GDSLTGFRVDLGAQATEHVPKQRIFTRADDGESINDGYFRLGLSYEGSSPSILGGRATAGVVTPPIAFDAS-----ADAMKTAIES----LEQVTQVQVERNALDADGAFEWIILFDLVAYDG-----------------EDPLPLLSLYTETVSAQWTGDGDQVAVQYLRMAPSSPDRHGRICSD---------------ECSYQVTGLQTGRAFSFRVRAQYSYAIGWSSWSASSEPLEIPAT-----------PVPRAPSTPELLAATTSHVTISWRMRRELTQENGIFAREFFPVTSFQAQQQCDSEIGWTTISERIPPGFSGN---SDTFVTVVASLDRPPGSTCEFRVAATNANGQGPFSLPSAKFTTLQTAPGA---------VANLRVARNPLTVVWNTPEVLGGHALEELTYDVEYRTTLGSTWTRLPAELVDCSSRLA-NISMTSLKGYTTYVTRVRAVAERQAGSFSQSAEFLTDYTVEDESNSDNVK-------DLTLGTRQVVIAAARQQC---ANTQDWYY-------VQLTGNGGSGGSTSGDEAKPGEHGAVLVFPVTWSGERL-AEHSFFYTGSVQTYRVPIDQSAPHLAHRIVALDVYAWGAGGAGARSSNGAS-----SDLSN-----GGGGAFARGVFRVSAGDAVDILVGG 651 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig1060.945.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig1060.945.1 >prot_Ecto-sp8_S_contig1060.945.1 ID=prot_Ecto-sp8_S_contig1060.945.1|Name=mRNA_Ecto-sp8_S_contig1060.945.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=1062bp MPYQLGSSKSTMSPPWYLTALMATFLATRGAAITPNHGDFQQASPDPQVSback to top mRNA from alignment at Ecto-sp8_S_contig1060:4258..17420+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig1060.945.1 ID=mRNA_Ecto-sp8_S_contig1060.945.1|Name=mRNA_Ecto-sp8_S_contig1060.945.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=13163bp|location=Sequence derived from alignment at Ecto-sp8_S_contig1060:4258..17420+ (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig1060:4258..17420+ >mRNA_Ecto-sp8_S_contig1060.945.1 ID=mRNA_Ecto-sp8_S_contig1060.945.1|Name=mRNA_Ecto-sp8_S_contig1060.945.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=3186bp|location=Sequence derived from alignment at Ecto-sp8_S_contig1060:4258..17420+ (Ectocarpus species8 EcLAC_412)back to top |