mRNA_Ecto-sp8_S_contig1059.924.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig1059.924.1 vs. uniprot
Match: D8LGR6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGR6_ECTSI) HSP 1 Score: 731 bits (1886), Expect = 1.890e-262 Identity = 370/376 (98.40%), Postives = 373/376 (99.20%), Query Frame = 1
Query: 64 MCSRGLRTSLLGVVVGAATVESMTLTARSGG-FLRMMVARSSSPTYAAASKRTMSMSVDAGVDAARYTNFIKDKAKFPNPPRRLPTLLRFLQHKGLTPVDPADRAGLNPFLVPLVKGDNGVVTGLLRWPTSPETLEMPVVRNGETGLELLADNAEHFIRRVVAEEDFAGSADSEELIRLGNEGLPEADPMYEKGAVEKLGVGVEKYLALRVGAFADVYEWLTASHLEKGDSTAALASAEKANEIFVGWGRPYGHYARVLAKMDRREMEAKDAAKVSLRCPCWTISPNSKDLEEVVKIAGYEDMASVLTMYEGMAADEQPDKINEGKSPMQVALDRAAHLMDAVAFGHKDWDGVREELAERYDQGGIPDIARFVRME 1188
MCSRGLRTSLLGVVVGAATVESMTLTARSGG FLRMMV RSSSPTYAAA+KRTMSMSVDAGVDAARYTNFIKDKAKFPNPPRRLPTLLRFLQHKGLTPVDPADRAGLNPFLVPLVKGD+GVVTGLLRWPTSPETLEMPVVRNGETGLELLADNAEHFIRRVVAEEDFAGSADSEELIRLGNEGLPEADP+YEKGAVE LGVGVEKYLALRVGAFADVYEWLTASHLEKGDSTAALASAEKANEIFVGWGRPYGHYARVLAKMDRREMEAKDAAKVSLRCPCWTISPNSKDLEEVVKIAGYEDMASVLTMYEGMAADEQPDKINEGKSPMQVALDRAAHLMDAVAFGHKDWDGVREELAERYDQGGIPDIARFVRME
Sbjct: 1 MCSRGLRTSLLGVVVGAATVESMTLTARSGGGFLRMMVTRSSSPTYAAANKRTMSMSVDAGVDAARYTNFIKDKAKFPNPPRRLPTLLRFLQHKGLTPVDPADRAGLNPFLVPLVKGDDGVVTGLLRWPTSPETLEMPVVRNGETGLELLADNAEHFIRRVVAEEDFAGSADSEELIRLGNEGLPEADPLYEKGAVENLGVGVEKYLALRVGAFADVYEWLTASHLEKGDSTAALASAEKANEIFVGWGRPYGHYARVLAKMDRREMEAKDAAKVSLRCPCWTISPNSKDLEEVVKIAGYEDMASVLTMYEGMAADEQPDKINEGKSPMQVALDRAAHLMDAVAFGHKDWDGVREELAERYDQGGIPDIARFVRME 376
BLAST of mRNA_Ecto-sp8_S_contig1059.924.1 vs. uniprot
Match: A0A836CI50_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CI50_9STRA) HSP 1 Score: 365 bits (936), Expect = 3.130e-119 Identity = 176/325 (54.15%), Postives = 232/325 (71.38%), Query Frame = 1
Query: 226 MSVDAGVDAARYTNFIKDKAKFPNPPRRLPTLLRFLQHKGLTPVDPADRAGLNPFLVPLVKGDNGVVTGLLRWPTSPETLEMPVVRNGE-----TGLELLADNAEHFIRRVVAEEDFAGSADSEELIRLGNEGLPEADPMYEKGAVEKLGVGVEKYLALRVGAFADVYEWLTASHLEKGDSTAALASAEKANEIFVGWGRPYGHYARVLAKMDRREMEAKDAAKVSLRCPCWTISPNSKDLEEVVKIAGYEDMASVLTMYEGMAADEQPDKINEGKSPMQVALDRAAHLMDAVAFGHKDWDGVREELAERYDQGGIPDIARFVRM 1185
MS + VDA+ Y F+ +KA NPPRRL TLL+ LQ KG+ P DPADR GLNPF +P+ +G GLLRWPT+PE L MP+VR+ +GL+LLA + +H+I+R+ AEEDF GS + E+I L N GL ++ Y G+V+KLG GVE+Y L+V F D+Y+WL +HL KGD +ALA+AEK NE+F+GWG PY YA+VLA M R+ EAKDAAKVSLRCPCWTI+ ++ +LE V +IAGY DM V +Y+ +A D Q K EGK+P Q+ALDRAAH+MDAV FG++DWD VR LA+ Y + G+P++A FV++
Sbjct: 1 MSTLSDVDASPYLEFLNEKAVAANPPRRLSTLLQLLQFKGMAPCDPADRKGLNPFFIPMATDVDGTKVGLLRWPTAPEHLAMPLVRSNSGSSPSSGLQLLATDVDHYIKRIAAEEDFKGSPMAREVIALANNGLWDSQEPYVAGSVKKLGYGVERYQMLKVAPFPDIYKWLVDAHLAKGDQISALATAEKFNEVFLGWGHPYAFYAQVLAGMTGRDAEAKDAAKVSLRCPCWTITRDAAELEAVCRIAGYSDMGEVKQLYQRLAEDPQHGKKTEGKAPAQIALDRAAHMMDAVIFGYQDWDSVRAGLADMYQEAGMPELADFVKL 325
BLAST of mRNA_Ecto-sp8_S_contig1059.924.1 vs. uniprot
Match: H6WBA3_VAULI (Uncharacterized protein n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WBA3_VAULI) HSP 1 Score: 295 bits (756), Expect = 8.100e-92 Identity = 140/307 (45.60%), Postives = 201/307 (65.47%), Query Frame = 1
Query: 268 FIKDKAKFPNPPRRLPTLLRFLQHKGLTPVDPADRAGLNPFLVPLVKG--DNGVVTGLLRWPTSPETLEMPVVRNGETGLELLADNAEHFIRRVVAEEDFAGSADSEELIRLGNEGLPEADPMYEKGAVEKLGVGVEKYLALRVGAFADVYEWLTASHLEKGDSTAALASAEKANEIFVGWGRPYGHYARVLAKMDRREMEAKDAAKVSLRCPCWTISPNSKDLEEVVKIAGYEDMASVLTMYEGMAADEQPDKINEGKSPMQVALDRAAHLMDAVAFGHKDWDGVREELAERYDQGGIPDIARFVR 1182
F+K KA NPP+RL TLL+ + K + DP DR L+PF +PL D G GLLRWPT+P+ MP+V+ G+EL+A++ + +IRRV +EEDF ++ S+++++L NEGLPE Y+ G+ G++K+ L +G F D+Y WL SHL +GD +AL +AEK NE+F GWG PY Y++ L++M R +EA+DAAKV++RCP WT++ + +L+ + ++ GY + V ++ MA D Q DK NEGK P+Q+ALDRAAH+MDAV G W VREEL Y + G+ +A FVR
Sbjct: 48 FLKSKANVANPPKRLETLLKLFEIKKVETCDPNDRRNLHPFFIPLANSGDDFGSKIGLLRWPTAPDKFPMPLVKANSVGMELMANDIDMYIRRVASEEDFKETSISKDIVKLANEGLPENSKPYQGGSAANFKFGLQKFQLLNIGPFPDLYVWLVNSHLSRGDEISALTAAEKFNELFPGWGYPYAFYSKTLSRMKGRHLEARDAAKVAMRCPLWTLTLDKAELKSIFELGGYGNEIDVEVLHRRMAEDVQEDKKNEGKQPVQIALDRAAHVMDAVVVGRGTWGDVREELYGLYKEAGMSHLAEFVR 354
BLAST of mRNA_Ecto-sp8_S_contig1059.924.1 vs. uniprot
Match: A0A7S3EKV4_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EKV4_9RHOD) HSP 1 Score: 228 bits (581), Expect = 2.910e-66 Identity = 130/314 (41.40%), Postives = 196/314 (62.42%), Query Frame = 1
Query: 247 DAARYTNFIKDKAKFPNPPRRLPTLLRFLQHKGLTPVDPADRAGLNPFLVPLVKGDNGVVTGLLRWPTSPETLEMPVVRN--GETGLELLADNAEHFIRRVVAEEDFAGSADSEELIRLGNEGLPEADPMYEKGAVEKLGVGVEKYLALRVGAFADVYEWLTASHLEKGDSTAALASAEKANEIFVGWGRPYGHYARVLAKMDRREMEAKDAAKVSLRCPCWTISPNSKDLEEVVKIAGYEDMASVLTMYEGMAADEQPDKINEGKSPMQVALDRAAHLMDAVAFGHKDWDGVREELAERYDQGGIPDIARFVR 1182
DAA ++ +++D A P+ L +LL L+ KG DP+ RAGL+PFL+P+ + G TG LRWPT P +E+P+VRN GE GL LL+ AE+FI+R +AE D A + + +PE + E G VE LG G+E+Y+ L++G F D+YE LT H KGD +AL AE++ F GW R + +AR+L + +R EA+DAA+ +L+ P WT+ + L+E+ +IAGY+D S+ +++ +A DE+ ++I +GK QVALDRAA+LMD WD +++ELA Y++G + D A F++
Sbjct: 28 DAAVFSEYLEDVANL-KAPKYLRSLLDVLEAKGEKIGDPSKRAGLHPFLIPISSDEEGT-TGFLRWPTPPPDMEVPIVRNAKGEMGLTLLSTGAENFIKRHMAELDSAA--------KPADVSVPEELQIAE-GEVESLGFGLERYVILKIGPFPDIYEGLTRFHEIKGDMQSALVCAERSGVAFPGWARGHCFHARLLQRFNRNS-EARDAARYALQLPLWTLGDS---LQEMGQIAGYQDETSLQKIFKRLAEDERENEIKDGKPKEQVALDRAAYLMDYTYAAGGSWDEIKDELAALYNEGMVTDSASFLK 326
BLAST of mRNA_Ecto-sp8_S_contig1059.924.1 vs. uniprot
Match: W7U1F2_9STRA (Cyclin delta-3 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U1F2_9STRA) HSP 1 Score: 221 bits (562), Expect = 5.030e-63 Identity = 131/311 (42.12%), Postives = 186/311 (59.81%), Query Frame = 1
Query: 265 NFIKDKAKFPNPPRRLPTLLRFLQHKGLTPVDPADRAGLNPFLVPLVK-GDNGVVTGLLRWPTSPETLEMPVV--RNGETGLELLADNAEHFIRRVVAEEDFAGSADSEELIRLGNEGLPEADPMYEKGAVEKLGVGVEKYLALRVGAFADVYEWLTASHLEKGDSTAALASAEKANEIFVGWGRPYGHYARVLAKMDRREMEAKDAAKVSLRCPCWTISPNSKDLEEVVKIAGYEDMASVLTMYEGMAADEQPDKINEGKSPMQVALDRAAHLMDAVAFGH---KDWDGVREELAERYDQGGIPDIARFV 1179
+F++++A P PP L L++ L ++G V P++ L+P ++PL K GD T LLRWPT E +PVV R G +GL+L+A + R+ AEED ++E L N LP A+ Y +GAVEK+G G+E+YL L+VG+F DVY++LT H+ KGD +AL +AEKA F GWG+PY Y R+L M RE+E +DAA +LR P WT++ + DLE V+ A + + DE+ ++ +GK P QVALDRAA+LMDA G + W VR LAE Y + G+ ++A FV
Sbjct: 56 DFLQNEAGIP-PPSDLSALIQLLLYRGEESVFPSENTELHPLVIPLTKSGDE--YTCLLRWPTPQEGAPVPVVKARPGLSGLKLVALSTLDLAHRLAAEEDHGQGREAEWAASLVNAYLP-AEKQYVRGAVEKVGYGLERYLFLKVGSFPDVYKFLTEFHMSKGDQASALVTAEKAYNTFNGWGQPYMEYCRLLQGMKGRELEMRDAAFAALRTPLWTVADDDGDLEMVLN-AAKSSREKAADKFWKLYEDERLQEVKQGKLPEQVALDRAAYLMDAALVGGNGIRSWSDVRPPLAELYREAGMRELADFV 361
BLAST of mRNA_Ecto-sp8_S_contig1059.924.1 vs. uniprot
Match: A0A2V3IY10_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IY10_9FLOR) HSP 1 Score: 215 bits (548), Expect = 3.460e-61 Identity = 123/318 (38.68%), Postives = 191/318 (60.06%), Query Frame = 1
Query: 241 GVDAAR-YTNFIKDKAKFPNPPRRLPTLLRFLQHKGLTPVDPADRAGLNPFLVPLVKG-DNGVVTGLLRWPTSPETLEMPVVRNG--ETGLELLADNAEHFIRRVVAEEDFAGSADSEELIRLGNEGLPEADPMYEKGAVEKLGVGVEKYLALRVGAFADVYEWLTASHLEKGDSTAALASAEKANEIFVGWGRPYGHYARVLAKMDRREMEAKDAAKVSLRCPCWTISPNSKDLEEVVKIAGYEDMASVLTMYEGMAADEQPDKINEGKSPMQVALDRAAHLMDAVAFGHKDWDGVREELAERYDQGGIPDIARFVR 1182
GV R Y ++ AK +PP L LL L P+ R L+PFL+PLV ++ V TGLLRWPT P+ +++P+V++ + L+L+A +A+ ++ R +A DFAG+ + +R L A Y+ G V++ GVG+E++L L+VG F D+YE L H KGD+ +AL + E++ GWGR + +A L ++ R EMEA+DAA+ L+ P WTI + + L ++ +AGYED S+ +Y+ + D++ +I +GK+P QVALDRAA+L+D W+ ++E+LA YD+ +PD A FVR
Sbjct: 35 GVSELREYERYLTQVAKT-SPPPYLDGLLHALSASSTRFTPPSIRTDLHPFLIPLVYDIESEVTTGLLRWPTPPDEMDLPIVQSSPRDPSLKLIAPSAKSYVTRQLASADFAGNYEVRNSLRSACS-LALA---YQNGDVDQSGVGLERFLILKVGPFPDIYEGLVEFHKAKGDTQSALITCERSANAHPGWGRAHAFHANFLRELGR-EMEARDAARFCLQMPLWTIG-SVETLLDMASLAGYEDSTSLCKIYKRLYEDDRKQEIADGKAPQQVALDRAAYLLDVCFTDGSGWESIKEDLAALYDEADMPDFATFVR 345
BLAST of mRNA_Ecto-sp8_S_contig1059.924.1 vs. uniprot
Match: A0A1Y1HZ51_KLENI (Uncharacterized protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HZ51_KLENI) HSP 1 Score: 204 bits (519), Expect = 2.640e-57 Identity = 131/313 (41.85%), Postives = 189/313 (60.38%), Query Frame = 1
Query: 259 YTNFIKDKAKFPNPPRRLPTLLRFLQHKGLTPVDPADRAGLNPFLVPLVKGDN-GVVTGLLRWPTSPETLEMPVVRNGETG-LELLADNAEHFIRRVVAEEDFAGSADSEELIRLGNEGLPEADPMYEKG--AVEKLGVGVEKYLALRVGAFADVYEWLTASHLEKGDSTAALASAEK-ANEIFVGWGRPYGHYARVLAKMDRREMEAKDAAKVSLRCPCWTISPNSKDLEEVVKIAGYEDMASVLTMYEGMAADEQPDKINEGKSPMQVALDRAAHLMDAVAFGHKDWDGVREELAERYDQGGIPDIARFVR 1182
+ +++D A PP LPTLL+ L+ G V PA+RAG+ P ++PL + ++ G +TG+LRWPT PE LEMPVVR + G L LLA E FI +AEED AG S LG+EG +Y G A K V YL VG F DV+E L HLE+ D ++L +AE A + F G+GR + + A +L K R+ E++DAA+++L+CP WT+ + EV ++AG+ D + + E + ++ + I +GKSP QVALD+AA++MD +A +WD VRE++AE YD+GG+P +A F R
Sbjct: 15 HATYLRDVADI-TPPPLLPTLLKALEASGEEVVSPAERAGVIPLVIPLTRNESTGELTGILRWPTPPEGLEMPVVRVQKNGQLWLLAKTVEEFITMQLAEEDAAGG--SALASALGDEGKR----LYRTGDFAASKTP-NVNVYLMKSVGKFPDVFERLAEQHLERKDEVSSLVTAEYYARKHFPGFGRAFVYNA-ILYKRLGRKQESRDAARIALKCPWWTLGAS---YAEVCELAGWGD-EKLEFVKEKLTSEATQEDITKGKSPEQVALDQAAYMMD-IAAAENNWDDVREQIAELYDRGGLPKLAHFFR 313
BLAST of mRNA_Ecto-sp8_S_contig1059.924.1 vs. uniprot
Match: A0A059AMV1_EUCGR (Uncharacterized protein n=3 Tax=Eucalyptus grandis TaxID=71139 RepID=A0A059AMV1_EUCGR) HSP 1 Score: 203 bits (517), Expect = 8.590e-57 Identity = 124/319 (38.87%), Postives = 184/319 (57.68%), Query Frame = 1
Query: 232 VDAGVDAARYTNFIKDKAKFPNPPRRLPTLLRFLQHKGLTPVDPADRAGLNPFLVPLVKGDNGVVTGLLRWPTSPETLEMPVVRNGETGLELLADNAEHFIRRVVAEEDFAGSADSEELIRLGNEGLPEADPMYEKGAVEKLGV-GVEKYLALRVGAFADVYEWLTASHLEKGDSTAALASAE--KANEIFVGWGRPYGHYARVLAKMDRREMEAKDAAKVSLRCPCWTISPNSKDLEEVVKIAGYEDMASVLTMYEGMAADEQPDKINEGKSPMQVALDRAAHLMDAVAFGHKDWDGVREELAERYDQGGIPDIARFV 1179
V ++ + +FIKD A PP+ L LL+ LQ +G T V P R GL P ++PLV+ +G VTGLLRWPT+P +EMPVV + G+ LLA N + +I R++ EED S+EL +E E +Y KG K + +E YL +VG F DV E H ++GD +A+ + E ++F G+GRP+ YA +L ++ R EAKDAA+V+L+ P WT+ EEV +IA +ED + + E ++ + + + I +GK+P QV+LD AA L+D +A W E +AE Y + G+ +IARF+
Sbjct: 24 VKCSSSSSGHLSFIKDVAAT-EPPKYLHYLLKVLQTRGETIVSPGSRQGLIPLVIPLVQNLSGDVTGLLRWPTAPPGMEMPVVEVRKHGVWLLAKNVDQYIHRILVEEDANSQRSSDELYHASSEAGKE---LYNKGDFAKSPMKNIEAYLLKKVGMFPDVLERKVTRHFDEGDKVSAMVTGEFYTKKDLFPGFGRPFAFYAEILLRVGRAS-EAKDAARVALKSPWWTLGCG---YEEVAQIAQWED-EQIEYIKEKVSEEGKQEDIKKGKAPAQVSLDEAAFLLD-LASVEGTWSDYLERIAECYKEAGLDEIARFI 332
BLAST of mRNA_Ecto-sp8_S_contig1059.924.1 vs. uniprot
Match: A0A8B8QYG8_9MYRT (protein IN CHLOROPLAST ATPASE BIOGENESIS, chloroplastic n=1 Tax=Rhodamnia argentea TaxID=178133 RepID=A0A8B8QYG8_9MYRT) HSP 1 Score: 204 bits (519), Expect = 2.840e-56 Identity = 124/316 (39.24%), Postives = 181/316 (57.28%), Query Frame = 1
Query: 241 GVDAARYTNFIKDKAKFPNPPRRLPTLLRFLQHKGLTPVDPADRAGLNPFLVPLVKGDNGVVTGLLRWPTSPETLEMPVVRNGETGLELLADNAEHFIRRVVAEEDFAGSADSEELIRLGNEGLPEADPMYEKGAVEKLGV-GVEKYLALRVGAFADVYEWLTASHLEKGDSTAALASAE--KANEIFVGWGRPYGHYARVLAKMDRREMEAKDAAKVSLRCPCWTISPNSKDLEEVVKIAGYEDMASVLTMYEGMAADEQPDKINEGKSPMQVALDRAAHLMDAVAFGHKDWDGVREELAERYDQGGIPDIARFV 1179
G DA+ + +FIKD A PP+RL LL+ L +G T V P R GL P ++PL + +G V GLLRWPT+P +EMP+V + G+ LLA N + +I R++ EED S+EL R +E E +Y KG K + +E YL VG F DV E H ++GD +A+ + E ++F G+GRP+ YA +L ++ R EAKDAA+V+L+ P WT+ EEV +IA +ED + + E ++ + + + I +GK+P QV+LD AA L+D + W E +AE Y + G DIA+FV
Sbjct: 97 GDDASGHLSFIKDVAAT-EPPKRLHHLLKVLHARGETIVSPGSRQGLIPLVIPLAQNLSGGVIGLLRWPTAPPGMEMPIVEVRKHGVWLLAKNVDQYIHRILVEEDANSQNGSDELYRASSEAGKE---LYNKGDFAKSQIKNLEVYLLKEVGMFPDVLERKVTRHFDEGDEVSAMVTGEFYTKKDLFPGFGRPFAFYAEILLRVGRAS-EAKDAARVALKSPWWTLGCT---YEEVAQIAQWED-EQIEYIKEKVSEEGKEEDIKKGKAPAQVSLDEAAFLLDLASI-EGTWSDYLERIAECYKEAGFDDIAKFV 402
BLAST of mRNA_Ecto-sp8_S_contig1059.924.1 vs. uniprot
Match: A0A5J4YYW9_PORPP (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YYW9_PORPP) HSP 1 Score: 204 bits (518), Expect = 3.000e-56 Identity = 126/343 (36.73%), Postives = 191/343 (55.69%), Query Frame = 1
Query: 178 RSSSPTYAAASKRTMSMSVDAGVDAARYTNFIKDKAKFPNPPRRLPTLLRFLQHKG-LTPVDPADRAGLNPFLVPLVKGDN--GVVTGLLRWPTSPETLEMPVVRNGETG---LELLADNAEHFIRRVVAEEDFAGSADSEELIRLGNEGLPEADPMYEKGAVEKLGVGVEKYLALRVGAFADVYEWLTASHLEKGDSTAALASAEKANEIFVGWGRPYGHYARVLAKMDRREMEAKDAAKVSLRCPCWTISPNSKDLEEVVKIAGYEDMASVLTMYEGMAADEQPDKINEGKSPMQVALDRAAHLMDAVAFGHKDWDG-VREELAERYDQGGIPDIARFVRM 1185
RSSS A S + D A + +I+++ +PPR L LR L+ G + R +P ++PL + + V GLLRWPT P ++MP+V G L +A++ E FIRR +A DF EL E A +Y+ G V K G+G+ KYL L VG F DV + L HL++GD +AL + EK + F GW + +AR+LA M RE+EA+DAA+ ++ P T+ +DL++V +AG++D S+ TM+ G++ D + ++ EGK+P QV+LDRAA+L+D + W+ + ELAE Y+Q +P++ARFVR+
Sbjct: 63 RSSSVLITAMSGDAVLPQSDVAKLAEAHEEYIREQCAA-DPPRYLAATLRALELNGEKLCTEAGKREADHPLVIPLARDEQTGAVSAGLLRWPTPPSGMDMPLVATSLVGPGQLCHIANSCELFIRRQLAYYDFL------ELKEEFTEADKLAPGLYDAGQVMKSGMGLHKYLMLNVGPFMDVLQTLARGHLDRGDEQSALITCEKMAQSFPGWSHAHAFHARMLASMSDRELEARDAARFAIHLPLMTLD---EDLDKVASLAGFQDPTSLGTMFRGLSLDPRESEVQEGKAPEQVSLDRAAYLLDRMVAERTAWNAEAKNELAELYEQSRLPEVARFVRL 395 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig1059.924.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig1059.924.1 >prot_Ecto-sp8_S_contig1059.924.1 ID=prot_Ecto-sp8_S_contig1059.924.1|Name=mRNA_Ecto-sp8_S_contig1059.924.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=376bp MCSRGLRTSLLGVVVGAATVESMTLTARSGGFLRMMVARSSSPTYAAASKback to top mRNA from alignment at Ecto-sp8_S_contig1059:861..11313+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig1059.924.1 ID=mRNA_Ecto-sp8_S_contig1059.924.1|Name=mRNA_Ecto-sp8_S_contig1059.924.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=10453bp|location=Sequence derived from alignment at Ecto-sp8_S_contig1059:861..11313+ (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig1059:861..11313+ >mRNA_Ecto-sp8_S_contig1059.924.1 ID=mRNA_Ecto-sp8_S_contig1059.924.1|Name=mRNA_Ecto-sp8_S_contig1059.924.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=1128bp|location=Sequence derived from alignment at Ecto-sp8_S_contig1059:861..11313+ (Ectocarpus species8 EcLAC_412)back to top |