mRNA_Ecto-sp8_S_contig105807.913.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig105807.913.1 vs. uniprot
Match: A0A6A4VHN1_AMPAM (Eukaryotic peptide chain release factor subunit 1 n=3 Tax=Thoracicalcarea TaxID=2899756 RepID=A0A6A4VHN1_AMPAM) HSP 1 Score: 288 bits (738), Expect = 3.040e-97 Identity = 139/170 (81.76%), Postives = 156/170 (91.76%), Query Frame = 1
Query: 1 IKTVDVSYGGENGFNQAIELSAECLSNVKFIQEKKLIGKYFDEISQDTQKYCFGVEDTLKALEMGAVETLICWENLDIQRVTLKNHGSGEEKTLFLNSSQEKDKTHFMDQETGVEMELEENIPLLEWLANNYKKFGAALEIITDRSQEGSQYVRGFGGIGGMLRYTVDFQ 510
IK VDVSYGGENGFNQAIELSAECL+NVKFIQEKKLIG+YFDEISQDT KYCFGV+DTL ALE+GAVETLICWENLDIQR+ LKNH SGEEK L L +EKD++HF D ++GVEMEL +++PLLEWLANNYK FGA+LEIITDRSQEGSQ+VRGFGG+GGMLRYTV+FQ
Sbjct: 28 IKLVDVSYGGENGFNQAIELSAECLANVKFIQEKKLIGRYFDEISQDTGKYCFGVKDTLAALELGAVETLICWENLDIQRIVLKNHASGEEKILHLTPEEEKDRSHFTDSDSGVEMELVDSMPLLEWLANNYKSFGASLEIITDRSQEGSQFVRGFGGVGGMLRYTVNFQ 197
BLAST of mRNA_Ecto-sp8_S_contig105807.913.1 vs. uniprot
Match: C1BTM2_LEPSM (Eukaryotic peptide chain release factor subunit 1 n=3 Tax=Neocopepoda TaxID=116569 RepID=C1BTM2_LEPSM) HSP 1 Score: 292 bits (748), Expect = 1.260e-95 Identity = 143/170 (84.12%), Postives = 154/170 (90.59%), Query Frame = 1
Query: 1 IKTVDVSYGGENGFNQAIELSAECLSNVKFIQEKKLIGKYFDEISQDTQKYCFGVEDTLKALEMGAVETLICWENLDIQRVTLKNHGSGEEKTLFLNSSQEKDKTHFMDQETGVEMELEENIPLLEWLANNYKKFGAALEIITDRSQEGSQYVRGFGGIGGMLRYTVDFQ 510
IK VDVSYGGENGFNQAIEL+AE L+NVKFIQEKKLIG+YFD+ISQDT KYCFGVEDTLKALEMGAVETLICWENLDIQR LKNHG+GEEK L L S QEKD THF D+ETGVE+ELE+N P LEWLANNYK +GA LEIITD+SQEGSQ+VRGFGGIGGMLRY VDFQ
Sbjct: 250 IKLVDVSYGGENGFNQAIELAAESLANVKFIQEKKLIGRYFDQISQDTGKYCFGVEDTLKALEMGAVETLICWENLDIQRYVLKNHGAGEEKVLHLTSEQEKDMTHFTDKETGVELELEDNTPFLEWLANNYKSYGATLEIITDKSQEGSQFVRGFGGIGGMLRYKVDFQ 419
BLAST of mRNA_Ecto-sp8_S_contig105807.913.1 vs. uniprot
Match: A0A553NXS9_TIGCA (Eukaryotic peptide chain release factor subunit 1 n=1 Tax=Tigriopus californicus TaxID=6832 RepID=A0A553NXS9_TIGCA) HSP 1 Score: 291 bits (744), Expect = 5.360e-95 Identity = 143/170 (84.12%), Postives = 154/170 (90.59%), Query Frame = 1
Query: 1 IKTVDVSYGGENGFNQAIELSAECLSNVKFIQEKKLIGKYFDEISQDTQKYCFGVEDTLKALEMGAVETLICWENLDIQRVTLKNHGSGEEKTLFLNSSQEKDKTHFMDQETGVEMELEENIPLLEWLANNYKKFGAALEIITDRSQEGSQYVRGFGGIGGMLRYTVDFQ 510
IK VDVSYGGENGFNQAIEL+AE L+NVKFIQEKKLIGKYFD+ISQ+T KYCFGVEDTL+ LEMGAVETLICWENLDIQR TLKNH +GEEK L L+S QEKD THF D++TGVE+ELEENIP LEWLANNYK FGA LEIITDRSQEGSQ+VRGFGGIGGMLRY VD Q
Sbjct: 252 IKLVDVSYGGENGFNQAIELAAESLANVKFIQEKKLIGKYFDQISQETGKYCFGVEDTLRCLEMGAVETLICWENLDIQRFTLKNHSTGEEKILHLSSEQEKDMTHFTDKDTGVELELEENIPFLEWLANNYKNFGATLEIITDRSQEGSQFVRGFGGIGGMLRYKVDLQ 421
BLAST of mRNA_Ecto-sp8_S_contig105807.913.1 vs. uniprot
Match: A0A8D9ENT7_9HEMI (Eukaryotic peptide chain release factor subunit 1 n=2 Tax=Cacopsylla melanoneura TaxID=428564 RepID=A0A8D9ENT7_9HEMI) HSP 1 Score: 277 bits (709), Expect = 5.090e-93 Identity = 136/167 (81.44%), Postives = 149/167 (89.22%), Query Frame = 1
Query: 10 VDVSYGGENGFNQAIELSAECLSNVKFIQEKKLIGKYFDEISQDTQKYCFGVEDTLKALEMGAVETLICWENLDIQRVTLKNHGSGEEKTLFLNSSQEKDKTHFMDQETGVEMELEENIPLLEWLANNYKKFGAALEIITDRSQEGSQYVRGFGGIGGMLRYTVDFQ 510
VDVSYGGENGFNQAIEL+AE L NVKFIQEKKLIGKYFDEISQDT KYCFGV+DTL+ALE+G+VETLICWENLDIQR LKNH +GEE+ L L QEKDK+HF D+ETGVE+EL E PLLEWLANNYK FGA LEIITD+SQEGSQ+VRGFGGIGG+LRY VDFQ
Sbjct: 17 VDVSYGGENGFNQAIELAAESLQNVKFIQEKKLIGKYFDEISQDTGKYCFGVDDTLRALELGSVETLICWENLDIQRYVLKNHSTGEERVLHLTPEQEKDKSHFTDKETGVELELVECQPLLEWLANNYKSFGATLEIITDKSQEGSQFVRGFGGIGGILRYKVDFQ 183
BLAST of mRNA_Ecto-sp8_S_contig105807.913.1 vs. uniprot
Match: A0A1D2MEI3_ORCCI (Eukaryotic peptide chain release factor subunit 1 n=4 Tax=Hexapoda TaxID=6960 RepID=A0A1D2MEI3_ORCCI) HSP 1 Score: 286 bits (731), Expect = 5.540e-93 Identity = 141/170 (82.94%), Postives = 151/170 (88.82%), Query Frame = 1
Query: 1 IKTVDVSYGGENGFNQAIELSAECLSNVKFIQEKKLIGKYFDEISQDTQKYCFGVEDTLKALEMGAVETLICWENLDIQRVTLKNHGSGEEKTLFLNSSQEKDKTHFMDQETGVEMELEENIPLLEWLANNYKKFGAALEIITDRSQEGSQYVRGFGGIGGMLRYTVDFQ 510
IK VDVSYGGENGFNQAIEL+AE L NVKFIQEKKLIG+YFDEISQDT KYCFGVEDTLKALE+GAVETLICWENLDIQR LKNH +GEE+ L L + QEKDKTHF D+ETGVE+EL E P LEW+ANNYK FGA LEIITDRSQEGSQ+VRGFGGIGGMLRY VDFQ
Sbjct: 257 IKLVDVSYGGENGFNQAIELAAESLQNVKFIQEKKLIGRYFDEISQDTGKYCFGVEDTLKALELGAVETLICWENLDIQRYVLKNHATGEERVLHLTAEQEKDKTHFTDKETGVELELVECTPFLEWIANNYKTFGATLEIITDRSQEGSQFVRGFGGIGGMLRYKVDFQ 426
BLAST of mRNA_Ecto-sp8_S_contig105807.913.1 vs. uniprot
Match: A0A7F5RC64_AGRPL (eukaryotic peptide chain release factor subunit 1-like n=1 Tax=Agrilus planipennis TaxID=224129 RepID=A0A7F5RC64_AGRPL) HSP 1 Score: 276 bits (706), Expect = 1.980e-92 Identity = 138/170 (81.18%), Postives = 147/170 (86.47%), Query Frame = 1
Query: 1 IKTVDVSYGGENGFNQAIELSAECLSNVKFIQEKKLIGKYFDEISQDTQKYCFGVEDTLKALEMGAVETLICWENLDIQRVTLKNHGSGEEKTLFLNSSQEKDKTHFMDQETGVEMELEENIPLLEWLANNYKKFGAALEIITDRSQEGSQYVRGFGGIGGMLRYTVDFQ 510
IK VDVSYGGENGFNQAIEL+AE L NVKFIQEKKLIG+YFDEISQDT KYCFGVEDTLK LE+GAVETLICWENLDIQR LKNH G E L L QEKDK+HF D+ETGVE+EL E PLLEWLANNYK FGA LEIITD+SQEGSQ+VRGFGGIGG+LRY VDFQ
Sbjct: 21 IKLVDVSYGGENGFNQAIELAAESLQNVKFIQEKKLIGRYFDEISQDTGKYCFGVEDTLKGLELGAVETLICWENLDIQRYVLKNHTVGTETVLHLTPEQEKDKSHFTDKETGVELELVECQPLLEWLANNYKNFGATLEIITDKSQEGSQFVRGFGGIGGLLRYKVDFQ 190
BLAST of mRNA_Ecto-sp8_S_contig105807.913.1 vs. uniprot
Match: A0A1B6DYM6_9HEMI (Eukaryotic peptide chain release factor subunit 1 n=6 Tax=Neoptera TaxID=33340 RepID=A0A1B6DYM6_9HEMI) HSP 1 Score: 280 bits (717), Expect = 7.190e-91 Identity = 138/170 (81.18%), Postives = 151/170 (88.82%), Query Frame = 1
Query: 1 IKTVDVSYGGENGFNQAIELSAECLSNVKFIQEKKLIGKYFDEISQDTQKYCFGVEDTLKALEMGAVETLICWENLDIQRVTLKNHGSGEEKTLFLNSSQEKDKTHFMDQETGVEMELEENIPLLEWLANNYKKFGAALEIITDRSQEGSQYVRGFGGIGGMLRYTVDFQ 510
IK VDVSYGGENGFNQAIEL+AE L NVKFIQEKKLIG+YFDEISQDT KYCFGVEDTL+ALE+G+VETLICWENLDIQR LKNH + EEK L L QEKDKTHF D+E+GVE+EL E+ PLLEWLANNYK FGA LEIITD+SQEGSQ+VRGFGGIGG+LRY VDFQ
Sbjct: 255 IKLVDVSYGGENGFNQAIELAAESLQNVKFIQEKKLIGRYFDEISQDTGKYCFGVEDTLRALELGSVETLICWENLDIQRYVLKNHTNSEEKVLHLTPEQEKDKTHFTDKESGVELELVESQPLLEWLANNYKSFGATLEIITDKSQEGSQFVRGFGGIGGLLRYKVDFQ 424
BLAST of mRNA_Ecto-sp8_S_contig105807.913.1 vs. uniprot
Match: A0A7R9A2P6_9CRUS (Eukaryotic peptide chain release factor subunit 1 n=1 Tax=Darwinula stevensoni TaxID=69355 RepID=A0A7R9A2P6_9CRUS) HSP 1 Score: 280 bits (716), Expect = 9.070e-91 Identity = 139/170 (81.76%), Postives = 151/170 (88.82%), Query Frame = 1
Query: 1 IKTVDVSYGGENGFNQAIELSAECLSNVKFIQEKKLIGKYFDEISQDTQKYCFGVEDTLKALEMGAVETLICWENLDIQRVTLKNHGSGEEKTLFLNSSQEKDKTHFMDQETGVEMELEENIPLLEWLANNYKKFGAALEIITDRSQEGSQYVRGFGGIGGMLRYTVDFQ 510
IK VD+SYGGENGFNQAIEL++ L+NVKFIQEKKLIG+YFDEISQDT KYCFGVEDTLKALE+GAVETLICWENLDI R LKNH +GEEK L LN QEKDKTHF D+ETGVE+EL E + LLEWLANNYK FGA LEIITDRSQEGSQ+VRGFGGIGG+LRY VDFQ
Sbjct: 253 IKIVDISYGGENGFNQAIELASGSLANVKFIQEKKLIGRYFDEISQDTGKYCFGVEDTLKALELGAVETLICWENLDITRFVLKNHQTGEEKVLHLNPEQEKDKTHFTDKETGVELELIECMALLEWLANNYKNFGATLEIITDRSQEGSQFVRGFGGIGGILRYKVDFQ 422
BLAST of mRNA_Ecto-sp8_S_contig105807.913.1 vs. uniprot
Match: A0A0A9Y8A5_LYGHE (Eukaryotic peptide chain release factor subunit 1 n=185 Tax=Hexapoda TaxID=6960 RepID=A0A0A9Y8A5_LYGHE) HSP 1 Score: 280 bits (715), Expect = 1.400e-90 Identity = 137/170 (80.59%), Postives = 151/170 (88.82%), Query Frame = 1
Query: 1 IKTVDVSYGGENGFNQAIELSAECLSNVKFIQEKKLIGKYFDEISQDTQKYCFGVEDTLKALEMGAVETLICWENLDIQRVTLKNHGSGEEKTLFLNSSQEKDKTHFMDQETGVEMELEENIPLLEWLANNYKKFGAALEIITDRSQEGSQYVRGFGGIGGMLRYTVDFQ 510
IK VDVSYGGENGFNQAIEL+AE L NVKFIQEKKLIG+YFDEISQDT KYCFGVEDTL+ALE+G+VETLICWENLDIQR LKNH + EEK L L QEKDK+HF D+E+GVE+EL E+ PLLEWLANNYK FGA LEIITD+SQEGSQ+VRGFGGIGG+LRY VDFQ
Sbjct: 255 IKLVDVSYGGENGFNQAIELAAESLQNVKFIQEKKLIGRYFDEISQDTGKYCFGVEDTLRALELGSVETLICWENLDIQRYVLKNHSNAEEKVLHLTPEQEKDKSHFTDKESGVELELVESQPLLEWLANNYKSFGATLEIITDKSQEGSQFVRGFGGIGGLLRYKVDFQ 424
BLAST of mRNA_Ecto-sp8_S_contig105807.913.1 vs. uniprot
Match: A0A1D2NDZ5_ORCCI (Eukaryotic peptide chain release factor subunit 1 n=2 Tax=Entomobryomorpha TaxID=730330 RepID=A0A1D2NDZ5_ORCCI) HSP 1 Score: 280 bits (715), Expect = 1.530e-90 Identity = 137/170 (80.59%), Postives = 150/170 (88.24%), Query Frame = 1
Query: 1 IKTVDVSYGGENGFNQAIELSAECLSNVKFIQEKKLIGKYFDEISQDTQKYCFGVEDTLKALEMGAVETLICWENLDIQRVTLKNHGSGEEKTLFLNSSQEKDKTHFMDQETGVEMELEENIPLLEWLANNYKKFGAALEIITDRSQEGSQYVRGFGGIGGMLRYTVDFQ 510
IK VDVSYGGENGFNQAIEL+AE L NVKFIQEKKLIG+YFDEISQDT +YCFGVEDTLKALE+GAVETLICWENLDIQR LKNHG+ EEK L L QEKDKTHF D+E+GVE+EL + P LEW+ANNYK FGA LEIITD+SQEGSQ+VRGFGGIGG+LRY VDFQ
Sbjct: 259 IKLVDVSYGGENGFNQAIELAAESLQNVKFIQEKKLIGRYFDEISQDTGRYCFGVEDTLKALELGAVETLICWENLDIQRYVLKNHGNAEEKILHLTPDQEKDKTHFTDKESGVELELVDCTPFLEWIANNYKTFGATLEIITDKSQEGSQFVRGFGGIGGLLRYKVDFQ 428 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig105807.913.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig105807.913.1 >prot_Ecto-sp8_S_contig105807.913.1 ID=prot_Ecto-sp8_S_contig105807.913.1|Name=mRNA_Ecto-sp8_S_contig105807.913.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=170bp IKTVDVSYGGENGFNQAIELSAECLSNVKFIQEKKLIGKYFDEISQDTQKback to top mRNA from alignment at Ecto-sp8_S_contig105807:1..510+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig105807.913.1 ID=mRNA_Ecto-sp8_S_contig105807.913.1|Name=mRNA_Ecto-sp8_S_contig105807.913.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=510bp|location=Sequence derived from alignment at Ecto-sp8_S_contig105807:1..510+ (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig105807:1..510+ >mRNA_Ecto-sp8_S_contig105807.913.1 ID=mRNA_Ecto-sp8_S_contig105807.913.1|Name=mRNA_Ecto-sp8_S_contig105807.913.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=510bp|location=Sequence derived from alignment at Ecto-sp8_S_contig105807:1..510+ (Ectocarpus species8 EcLAC_412)back to top |