mRNA_Ecto-sp8_S_contig10577.907.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig10577.907.1 vs. uniprot
Match: A0A6H5L5K3_9PHAE (TLC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L5K3_9PHAE) HSP 1 Score: 469 bits (1207), Expect = 4.970e-164 Identity = 223/229 (97.38%), Postives = 226/229 (98.69%), Query Frame = 1
Query: 4 SGGSNRNPHAVLTKQKSMYVDGLAARIHDDMNLAVLAGMALMAAWAMWEGDRWTQYVLTLFAAGYMVLDACWILCNPSGVKSPKTVLGHHVATLSVLVDPLLQRQHAFYTACALLVEFNTFLLILRRRVSWGGLLEVPFALSWVALRLIWYPFLGFYFTMCTFPETLKALYPERLVEWRFAVEEDRPVPMFLGSYLAWVGICIFQGWWSCALVRSYGRPAVVTRDKKFL 690
SGGSNRNPHAVLTKQKSMYVDGLAARIHDDMNLAVLAGMALMAAWAMW+GDRWTQY LTLFAAGYMVLDACWILCNPSGVKSP+TVLGHHVATLSVLVDPLLQ QHAFYTACALLVEFNTFLLILRRRVSWGGLLEVPFALSWVALRLIWYPFLGFYFTMCTFPETLKALYPERLV+WRFAVEEDRPVPMFLGSYLAWVGICIFQGWWSCALVRSYGRPAV TRDKKFL
Sbjct: 41 SGGSNRNPHAVLTKQKSMYVDGLAARIHDDMNLAVLAGMALMAAWAMWKGDRWTQYALTLFAAGYMVLDACWILCNPSGVKSPRTVLGHHVATLSVLVDPLLQPQHAFYTACALLVEFNTFLLILRRRVSWGGLLEVPFALSWVALRLIWYPFLGFYFTMCTFPETLKALYPERLVQWRFAVEEDRPVPMFLGSYLAWVGICIFQGWWSCALVRSYGRPAVATRDKKFL 269
BLAST of mRNA_Ecto-sp8_S_contig10577.907.1 vs. uniprot
Match: A0A835Z8V7_9STRA (TLC domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8V7_9STRA) HSP 1 Score: 237 bits (605), Expect = 6.660e-72 Identity = 119/201 (59.20%), Postives = 140/201 (69.65%), Query Frame = 1
Query: 58 YVDGLAARIHDDMNLAVLAGMALMAAWAMWEGDRWTQYVLTLFAAGYMVLDACWILCNPSGVKSPKTVLGHHVATLSVLVDPLLQRQHAFYTACALLVEFNTFLLILRRRVSWGG--LLEVPFALSWVALRLIWYPFLGFYFTMCTFPETLKALYPERLVEWRFAVEEDRPVPMFLGSYLAWVGICIFQGWWSCALVRSYG 654
+ G A++HDDMNL VL GMAL + AM+ DR QY LT+FA YMV DA WILCN VKSP+TVLGHH ATL+VL+DP + QHA YT ALLVE NTFLLI RRR WG L+E PF SWVALRLIWYPFL F++ +C FP L +YP +V WR +E D V ++ SY AWVGIC+FQ WWS L R+YG
Sbjct: 56 WTAGRGAQLHDDMNLVVLLGMALTSMVAMYTRDRALQYGLTVFAVAYMVTDAAWILCNMRAVKSPRTVLGHHAATLAVLIDPYMHPQHALYTCWALLVEANTFLLIARRRFRWGASALVEAPFVASWVALRLIWYPFLAFFWGLCAFPG-LADVYPAAIVRWRLRIEVDL-VRLYPASYAAWVGICVFQLWWSAQLFRNYG 254
BLAST of mRNA_Ecto-sp8_S_contig10577.907.1 vs. uniprot
Match: A0A7S4PA72_GUITH (Hypothetical protein n=2 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4PA72_GUITH) HSP 1 Score: 171 bits (432), Expect = 6.950e-47 Identity = 99/230 (43.04%), Postives = 134/230 (58.26%), Query Frame = 1
Query: 28 HAVLTKQKSMYVDGLAARIHDDMNLAVLAGMALMAAWAMWEGDRWTQYVLTLFAAGYMVLDACWILCNPSGVKSPKTVLGHHVATLSVLVDPLLQRQHAFYTACALLVEFNTFLLILRRRVSWGGLLEVPFALSWVALRLIWYPFLGFYFTMCTFPETLKALYPERL---VEWRFAVEEDRPVPMFLGSYLAWVGICIFQGWWSCALVRSY----GR--PAVVTRDKKFL 690
+A +Q + A+ +HD++NL L + A A+ DR +LT+ Y++LD+ WI P VKSP V HH+ATL VL+DPLLQ +H YT+ LLVE NT LL+LRRRVS+ ++EVPF L+WV LR IWYP L FYF +C P T L P L +E R +E PVPM S L+W +CIFQ +W+ L ++ GR P ++KK+L
Sbjct: 52 YAERKRQSLSWQPSPASDLHDNVNLIALFLLGGGAIAALALQDRNMHDLLTVSGFVYILLDSVWIFSQPKIVKSPGMVGSHHIATLLVLLDPLLQPKHRVYTSACLLVEINTLLLLLRRRVSYSAIVEVPFILTWVLLRNIWYPLLMFYFFLCFSPSTFIPLLPSSLSWVIEMRTKIELRNPVPMMGVSLLSWAMVCIFQFYWTAQLFSAHPWIWGRRKPTANGKEKKYL 281
BLAST of mRNA_Ecto-sp8_S_contig10577.907.1 vs. uniprot
Match: A0A7S0VYL2_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0VYL2_9CRYP) HSP 1 Score: 167 bits (422), Expect = 1.490e-45 Identity = 85/208 (40.87%), Postives = 126/208 (60.58%), Query Frame = 1
Query: 73 AARIHDDMNLAVLAGMALMAAWAMWEGDRWTQYVLTLFAAGYMVLDACWILCNPSGVKSPKTVLGHHVATLSVLVDPLLQRQHAFYTACALLVEFNTFLLILRRRVSWGGLLEVPFALSWVALRLIWYPFLGFYFTMCTFPETLKALYPERLVEWRFAVEEDRPVPMFLGSYLAWVGICIFQGWWSCALVRSY----GRPAVVTRDKK 684
A+ +HD NL VL+ + + +A+ + + +LT Y++LD+ W+L P+ VKSP V+ HH ATL VL+DPLL H+ YT+ LLVE NT LL+LRR++S+ L+EVPF +SWV LR +WYP L F+F +C+ P TL L+P +VE R +E VPM S ++W +C+ Q W+ L + GR R+++
Sbjct: 50 ASELHDSCNLFVLSLLGFGSVYALLTNHQASHRLLTTVGFMYVLLDSAWLLAVPTVVKSPGVVIAHHAATLLVLLDPLLSPSHSVYTSACLLVEINTLLLLLRRKMSYSVLVEVPFIISWVLLRNVWYPLLMFFFILCSAPGTLGPLFPRAMVEARRRIEGPEAVPMRFVSMVSWTAVCVLQLKWTGQLFAQHPWFGGRNKARDRERR 257
BLAST of mRNA_Ecto-sp8_S_contig10577.907.1 vs. uniprot
Match: A0A7S2V1S4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1S4_9STRA) HSP 1 Score: 150 bits (378), Expect = 3.090e-39 Identity = 81/217 (37.33%), Postives = 123/217 (56.68%), Query Frame = 1
Query: 28 HAVLTKQKSMYVDGLAARIHDDMNLAVLAGMALMAAWAMWEGDRWTQYV--LTLFAAGYMVLDACWILCNPSGVKSPKTVLGHHVATLSVLVDPLLQR-----QHAFYTACALLVEFNTFLLILRRRVSWGGLLEVPFALSWVALRLIWYPFLGFYFTMCTFPETLKALYPERLVEWRFAVEEDRPVPMFLGSYLAWVGICIFQGWWSCALVRSYGR 657
H +K + + +HD +NL L +A +A + + +T Y+ LDA WI PS +KSP TV HH++TL++L+ P+ +YTA A++VE NT LL +RR+ +G +E+PFALSWV +RL+WYP LGFYF +C F + L P+ ++ R +E P P++ S +A+V IC+FQ +WS LV+S+ R
Sbjct: 28 HVPEKLEKGGWNPSKLSELHDSINLVWLTVLASLAIVVLLSFPTCHSLLVLMTTLTTVYIALDAIWIFMFPSSIKSPVTVCLHHISTLAILLGPIFNAISGSGLQGYYTAAAIIVEANTVLLTMRRKFKFGLWVEIPFALSWVLIRLVWYPILGFYFMVCAFHSVRELLAPQFILHIRETIEGPEPEPLWKLSAMAFVLICMFQIFWSVPLVKSWMR 244
BLAST of mRNA_Ecto-sp8_S_contig10577.907.1 vs. uniprot
Match: A0A7S2B6S7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B6S7_9STRA) HSP 1 Score: 115 bits (287), Expect = 1.240e-26 Identity = 67/192 (34.90%), Postives = 106/192 (55.21%), Query Frame = 1
Query: 73 AARIHDDMNLAVLAGMALMAAWAMWEGDRWTQYVLTLFAAGYMVLDACWILCNPSGVKSPKTVLGHHVATLSVLVDPLLQRQHAFYTACALLVEFNTFLLILRRRVSWGGLLEVPFALSWVALRLIWYPFLGFYFTMCTFPETLKALYPERLVEWRFAVEEDRPVPMFLGSYLAWVGICIFQGWWSCALVRS 648
AA +HD++N+ + + + AA+++ G V+T A Y++ D W++ P VKSP ++ HH+ TL+VL DP+ H Y +CALLVE NT L+ LRRR+ EV F +W+ALRLIW+P L ++F +FPE + P F + + P+ + + + I + Q +W+ AL S
Sbjct: 11 AADLHDNINVVITSLIFFSAAFSL-AGLPPGHTVVTFGATAYIIFDIVWVMSQPRIVKSPVEIILHHLGTLAVLYDPITVLNHQKYASCALLVEVNTVLITLRRRLGRPMWCEVSFLATWLALRLIWFPCLSYWFLCSSFPEVF--VMP-------FGIARENNPPIDTSTTVFFCLIVLLQFYWTFALGSS 192
BLAST of mRNA_Ecto-sp8_S_contig10577.907.1 vs. uniprot
Match: A0A812KK43_9DINO (NMA1 protein n=3 Tax=Symbiodinium TaxID=2949 RepID=A0A812KK43_9DINO) HSP 1 Score: 110 bits (276), Expect = 2.090e-24 Identity = 70/207 (33.82%), Postives = 107/207 (51.69%), Query Frame = 1
Query: 73 AARIHDDMNLAVLAGMALMAAWAMWEGDRWTQYVLTL-FAAGYMVLDACWILCNPSGVKSPKTVLGHHVATLSVLVDPLLQRQHAFYTACALLVEFNTFLLILRRRVSWGGLLEVPFALSWVALRLIWYPFLGFYFTMCTFPET--LKALYPERLVEWRFAVEEDRPVPMFLGSYLAWVGICIFQGWWSCALVRSYGRPAVVTRDKK 684
A +HD +N+A L + ++A A+ G+ + + + + A Y+V DA WI P VK+P +V+ HH+ TL V+V+P+ H + ALLVE NT LL LRR + E+ F L+W +RLIW+P LG TF T L AL P V E RP + + L++ + + Q +W+CA+ R + +K
Sbjct: 16 AGLLHDWVNVAALTAIFALSAAALESGEESSLHTIVIAVTAAYLVSDALWIALQPDMVKTPVSVILHHLVTLIVIVEPMFYESHRVNASRALLVEINTVLLTLRRLLGRPAWCELGFYLTWAVIRLIWFPALGTALLASTFGWTSPLAALPPPLTA----LVVEVRPPAIRSYASLSFAAVVMLQFYWTCAMGRGMCKSGANKESRK 218
BLAST of mRNA_Ecto-sp8_S_contig10577.907.1 vs. uniprot
Match: A0A812JJT5_9DINO (Nicotinamide-nucleotide adenylyltransferase n=2 Tax=Symbiodinium TaxID=2949 RepID=A0A812JJT5_9DINO) HSP 1 Score: 111 bits (277), Expect = 8.890e-23 Identity = 70/207 (33.82%), Postives = 107/207 (51.69%), Query Frame = 1
Query: 73 AARIHDDMNLAVLAGMALMAAWAMWEGDRWTQYVLTL-FAAGYMVLDACWILCNPSGVKSPKTVLGHHVATLSVLVDPLLQRQHAFYTACALLVEFNTFLLILRRRVSWGGLLEVPFALSWVALRLIWYPFLGFYFTMCTFPET--LKALYPERLVEWRFAVEEDRPVPMFLGSYLAWVGICIFQGWWSCALVRSYGRPAVVTRDKK 684
A +HD +N+A L + ++A A+ G+ + + + + A Y+V DA WI P VK+P +V+ HH+ TL V+V+P+ H + ALLVE NT LL LRR + E+ F L+W +RLIW+P LG TF T L AL P V E RP + + L++ + + Q +W+CA+ R + +K
Sbjct: 16 AGLLHDWVNVAALTAIFALSAAALESGEESSLHTIVIAVTAAYLVSDALWIALQPDMVKTPVSVILHHLVTLIVIVEPMFYESHRVNASRALLVEINTVLLTLRRLLGRPAWCELGFYLTWAVIRLIWFPALGTALLASTFGWTSPLAALPPPLTA----LVVEVRPPAIRSYASLSFAAVVLLQFYWTCAMGRGMCKSGANRESRK 218
BLAST of mRNA_Ecto-sp8_S_contig10577.907.1 vs. uniprot
Match: A0A813G2R2_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813G2R2_POLGL) HSP 1 Score: 97.8 bits (242), Expect = 6.850e-20 Identity = 63/193 (32.64%), Postives = 102/193 (52.85%), Query Frame = 1
Query: 73 AARIHDDMNLAVLAGMALMAAWAMWEGDR--WTQYVLTLFAAGYMVLDACWILCNPSGVKSPKTVLGHHVATLSVLVDPLLQRQHAFYTACALLVEFNTFLLILRRRVSWGGLLEVPFALSWVALRLIWYPFLGFYFTMCTF--PETLKALYPERLVEWRFAVEEDRPVPMFLGSYLAWVGICIFQGWWSCAL 639
A +HD +N+ VL+ + ++A+ + G+ W + + A Y+ D WI NPS VK+PK +L HH TL V++D + H + AL+VE NT LL LRR + E+ F L+WV +RL+W+P LG T+ + L AL RL F + D PV + + +++ + + Q +W+ +
Sbjct: 34 AGLVHDWVNIGVLSLVFVLASIGILSGEDSVWHTVAIAVMCA-YLAGDVVWIAVNPSMVKTPKAILAHHAVTLIVIMDTIESASHRANASHALIVEINTVLLTLRRILGRPLWCEIGFYLTWVGIRLVWFPALGAALLASTWGRQDELAALLAPRLPALLFKMP-DPPVRSY--ASISFAVVVVLQFYWTIVI 222
BLAST of mRNA_Ecto-sp8_S_contig10577.907.1 vs. uniprot
Match: A0A7S0ASE2_9DINO (Hypothetical protein n=1 Tax=Pyrodinium bahamense TaxID=73915 RepID=A0A7S0ASE2_9DINO) HSP 1 Score: 98.6 bits (244), Expect = 7.470e-20 Identity = 60/191 (31.41%), Postives = 99/191 (51.83%), Query Frame = 1
Query: 85 HDDMNLAVLAGMALMAAWAMWEG-DRWTQYVLTLFAAGYMVLDACWILCNPSGVKSPKTVLGHHVATLSVLVDPLLQRQHAFYTACALLVEFNTFLLILRRRVSWGGLLEVPFALSWVALRLIWYPFLGFYFTMCTF--PETLKALYPERLVEWRFAVEEDRPVPMFLGSYLAWVGICIFQGWWSCALVRS 648
HD +N+ L + MA+ ++W G D ++ +F + Y+V D W+ P+ V++P +++ HHV TL V+ + H + ALLVE NT LL LRRR+ E F +W LRL+W+P L TF + L+A P L+ V+ P P+ + +++ + + Q +W+ L+RS
Sbjct: 28 HDWVNVVTLCLIFAMASASLWSGEDSLGHTMVVVFTSTYLVCDIVWVTLQPAIVRTPGSIVAHHVVTLVVIYGTVENVTHRVNASRALLVEINTVLLTLRRRLGRPVWCEAAFYATWGLLRLVWFPILSVAMLASTFGFADQLRASMPACLL-----VDVRSPPPIKAYASISFAAVVVLQYYWTFTLLRS 213 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig10577.907.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig10577.907.1 >prot_Ecto-sp8_S_contig10577.907.1 ID=prot_Ecto-sp8_S_contig10577.907.1|Name=mRNA_Ecto-sp8_S_contig10577.907.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=213bp MYVDGLAARIHDDMNLAVLAGMALMAAWAMWEGDRWTQYVLTLFAAGYMVback to top mRNA from alignment at Ecto-sp8_S_contig10577:1686..4753- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig10577.907.1 ID=mRNA_Ecto-sp8_S_contig10577.907.1|Name=mRNA_Ecto-sp8_S_contig10577.907.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=3068bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10577:1686..4753- (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig10577:1686..4753- >mRNA_Ecto-sp8_S_contig10577.907.1 ID=mRNA_Ecto-sp8_S_contig10577.907.1|Name=mRNA_Ecto-sp8_S_contig10577.907.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=639bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10577:1686..4753- (Ectocarpus species8 EcLAC_412)back to top |