mRNA_Ecto-sp8_S_contig105753.904.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig105753.904.1 vs. uniprot
Match: UPI000C78AAE5 (trypsin-like n=1 Tax=Eurytemora affinis TaxID=88015 RepID=UPI000C78AAE5) HSP 1 Score: 151 bits (381), Expect = 2.010e-42 Identity = 77/129 (59.69%), Postives = 98/129 (75.97%), Query Frame = 1
Query: 55 CRCGQANTKVKIVGGAATEENEYPWQVGLLSSQ---SSSTPFCGGTLVSNKEVLTAAHCTSGSTAAYVLLGEHDLRRA-DGEKKIRVCGTTNNPNYNSRTVDYDFSILTLCEE-VDFTTDISPACLPTS 426
C+CGQAN K KIVGG TE+NEYPWQV LL +Q S++TPFCGG+L+SN+EVLTAAHC GST YV LGEHD+ DG+K ++VC +T +P+YN D+D++IL LC+ V FT +ISP CLPT+
Sbjct: 48 CKCGQANVKTKIVGGQETEKNEYPWQVALLRNQQPSSTNTPFCGGSLISNQEVLTAAHCIIGSTI-YVALGEHDINDPNDGQKIVKVCSSTKHPSYNGNN-DFDYAILKLCDSPVTFTKEISPVCLPTA 174
BLAST of mRNA_Ecto-sp8_S_contig105753.904.1 vs. uniprot
Match: UPI000C795525 (trypsin alpha-3-like n=1 Tax=Eurytemora affinis TaxID=88015 RepID=UPI000C795525) HSP 1 Score: 134 bits (337), Expect = 1.010e-35 Identity = 63/125 (50.40%), Postives = 86/125 (68.80%), Query Frame = 1
Query: 55 CRCGQANTKVKIVGGAATEENEYPWQVGLLSSQSSSTPFCGGTLVSNKEVLTAAHCTSG--STAAYVLLGEHDLRRA-DGEKKIRVCGTTNNPNYNSRTVDYDFSILTLCEEVDFTTDISPACLP 420
C+CG N +IVGG+ T +N+YPWQ+GL+ + + P+CGG+L+SN++VLTAAHCT G ST +V+LGE+DL DG+ +RVCG +P Y S D+DFSIL LC+ V + I P CLP
Sbjct: 58 CKCGVRNYSSRIVGGSPTGQNKYPWQIGLVRTSTGKIPYCGGSLISNQDVLTAAHCTMGTSSTGIFVMLGENDLLNDNDGQTVVRVCGKVEHPRYQSSNQDFDFSILRLCDPVTVSKGILPVCLP 182
BLAST of mRNA_Ecto-sp8_S_contig105753.904.1 vs. uniprot
Match: A0A6A4VST0_AMPAM (Trypsin-1 n=2 Tax=Amphibalanus amphitrite TaxID=1232801 RepID=A0A6A4VST0_AMPAM) HSP 1 Score: 118 bits (295), Expect = 8.620e-29 Identity = 58/129 (44.96%), Postives = 92/129 (71.32%), Query Frame = 1
Query: 61 CGQANTKVKIVGGAATEENEYPWQVGLLSSQSSSTPFCGGTLVSNKEVLTAAHCTSGSTAA--YVLLGEHDLRRADGEKKIRVCGTTNNPNYNSRTVDYDFSILTLCEEVDFTT---DISPACLPTSSN 432
CG AN +IVGG ATE NEYPWQVGL+++ ++ P+CGGT+++N+ V+TAAHCT+G +A VLL +H++ + ++ V ++P+YNSRT+ +DFS+L L + +DF++ ++PACLP+ +
Sbjct: 167 CGVANRVTRIVGGEATEVNEYPWQVGLVNT-GNNRPWCGGTVINNQWVMTAAHCTAGESAGNLQVLLRKHNIGSDSNQIRMSVSQIVDHPSYNSRTLSHDFSLLKLSQTIDFSSLSNQVAPACLPSGGD 294
BLAST of mRNA_Ecto-sp8_S_contig105753.904.1 vs. uniprot
Match: A0A1D8QLQ6_EUPSU (Trypsin n=1 Tax=Euphausia superba TaxID=6819 RepID=A0A1D8QLQ6_EUPSU) HSP 1 Score: 114 bits (286), Expect = 2.280e-27 Identity = 66/132 (50.00%), Postives = 85/132 (64.39%), Query Frame = 1
Query: 55 CRCGQANTKVKIVGGAATEENEYPWQVGLLSSQSSSTPFCGGTLVSNKEVLTAAHCTSGSTAAYVLLGEHDLRRAD-GEKKIRVCGTTNNPNYNSRTVDYDFSILTLC-----EEVDFTTDISPACLPTSSN 432
C CGQAN +IVGG TE NEYPWQV L+S + S+ FCGG+L++++ VLTAAHCT S V+LG H D GE+++ V ++PNYNSR +D DFS+L L E VD I P CLP++SN
Sbjct: 188 CVCGQANRATRIVGGQTTEVNEYPWQVALVS-RGSTQVFCGGSLINDRWVLTAAHCTQ-SGVQQVILGNHLQSSTDTGERRVNVRRVVDHPNYNSRNLDNDFSLLELSTPQNLENVD--PQIRPVCLPSASN 315
BLAST of mRNA_Ecto-sp8_S_contig105753.904.1 vs. uniprot
Match: A0A6A4V2E0_AMPAM (Trypsin-7 n=7 Tax=Amphibalanus amphitrite TaxID=1232801 RepID=A0A6A4V2E0_AMPAM) HSP 1 Score: 113 bits (282), Expect = 2.890e-27 Identity = 61/127 (48.03%), Postives = 86/127 (67.72%), Query Frame = 1
Query: 61 CGQANTKVKIVGGAATEENEYPWQVGLLSSQSSSTPFCGGTLVSNKEVLTAAHCTSGSTAA--YVLLGEHDLRRADGEKKIRVCGTTNNPNYNSRTVD-YDFSILTLCEEVDFTT---DISPACLPT 423
CG AN +I+GG TE NEYPWQ GL+S+ S T +CGGT+++N+ VLTAAHCT+G +A+ VLL EH + +DGE + V ++P+Y S + YDFS+L L +DF++ ++PACLPT
Sbjct: 145 CGVANRASRIIGGVQTEVNEYPWQAGLVSTGGSRT-WCGGTVINNRYVLTAAHCTAGQSASGIQVLLREHRIGTSDGEMRFSVAQIIDHPSYTSASGSGYDFSLLKLSTTIDFSSLSNRVAPACLPT 270
BLAST of mRNA_Ecto-sp8_S_contig105753.904.1 vs. uniprot
Match: UPI001C908F6F (trypsin-1-like n=2 Tax=Amphibalanus amphitrite TaxID=1232801 RepID=UPI001C908F6F) HSP 1 Score: 112 bits (279), Expect = 7.200e-27 Identity = 61/126 (48.41%), Postives = 81/126 (64.29%), Query Frame = 1
Query: 61 CGQANTKVKIVGGAATEENEYPWQVGLLSSQSSSTPFCGGTLVSNKEVLTAAHCTSGSTA--AYVLLGEHDLRRADGEKKIRVCGTTNNPNYNS-RTVDYDFSILTLCEEVDFTT---DISPACLP 420
CG A +IVGG TE EYPWQ GL+S+ S +CGGT+++++ VLTAAHCT G +A VLLGEH + ADGE+++ V T +P Y S T YDFS+L L + +DF ++PACLP
Sbjct: 104 CGLARRSTRIVGGVETEVREYPWQAGLVSA-GDSWIWCGGTVINDRYVLTAAHCTVGRSADRLEVLLGEHAMFLADGERRVAVAAVTEHPRYRSVDTTGYDFSLLRLAQRLDFAALGGRVAPACLP 228
BLAST of mRNA_Ecto-sp8_S_contig105753.904.1 vs. uniprot
Match: UPI0018853FC7 (venom serine protease 34-like n=1 Tax=Pollicipes pollicipes TaxID=41117 RepID=UPI0018853FC7) HSP 1 Score: 114 bits (285), Expect = 9.530e-27 Identity = 62/131 (47.33%), Postives = 87/131 (66.41%), Query Frame = 1
Query: 55 CRCGQANTKVKIVGGAATEENEYPWQVGLLSSQSSSTPFCGGTLVSNKEVLTAAHCTSGSTAAY--VLLGEHDLRRADGEKKIRVCGTTNNPNYNSRTVD-YDFSILTLCEEVDFTTD--ISPACLPTSSN 432
C CG N +IVGG TE NEYPWQ GL+S+ + T +CGGT+++N+ V+TAAHCT GS+ + VLL EH + +DGE + V N+P+Y+S + YDFS+L L + F +D ++PACLPT+ N
Sbjct: 400 CCCGIPNRSSRIVGGVETEVNEYPWQAGLVSAGGTRT-WCGGTVINNRYVMTAAHCTVGSSPSQIEVLLKEHRISNSDGEIRASVQQIINHPSYSSASSSGYDFSLLKLTNPITFPSDNTLAPACLPTAGN 529
BLAST of mRNA_Ecto-sp8_S_contig105753.904.1 vs. uniprot
Match: A0A6A4W4W6_AMPAM (Serine/threonine-protein phosphatase n=2 Tax=Pancrustacea TaxID=197562 RepID=A0A6A4W4W6_AMPAM) HSP 1 Score: 113 bits (283), Expect = 1.480e-26 Identity = 62/127 (48.82%), Postives = 83/127 (65.35%), Query Frame = 1
Query: 61 CGQANTKVKIVGGAATEENEYPWQVGLLSSQSSSTPFCGGTLVSNKEVLTAAHCTSGSTA--AYVLLGEHDLRRADGEKKIRVCGTTNNPNYNS-RTVDYDFSILTLCEEVDFTT---DISPACLPT 423
CG A +IVGG TE EYPWQ GL+S+ S +CGGT+++++ VLTAAHCT G +A VLLGEH + ADGE+++ V T +P Y S T YDFS+L L +++DF ++PACLPT
Sbjct: 326 CGLARRSTRIVGGVETEVREYPWQAGLVSA-GDSWIWCGGTVINDRYVLTAAHCTVGRSADRLEVLLGEHAMFLADGERRVAVAAVTEHPRYRSVDTTGYDFSLLRLAQQLDFGALGGRVAPACLPT 451
BLAST of mRNA_Ecto-sp8_S_contig105753.904.1 vs. uniprot
Match: A0A6A4VBG1_AMPAM (Trypsin-3 n=3 Tax=Amphibalanus amphitrite TaxID=1232801 RepID=A0A6A4VBG1_AMPAM) HSP 1 Score: 112 bits (280), Expect = 1.710e-26 Identity = 60/129 (46.51%), Postives = 85/129 (65.89%), Query Frame = 1
Query: 61 CGQANTKVKIVGGAATEENEYPWQVGLLSSQSSSTPFCGGTLVSNKEVLTAAHCTSGSTAA--YVLLGEHDLRRADGEKKIRVCGTTNNPNYNSRTVDYDFSILTLCEEVDFTTD---ISPACLPTSSN 432
CG AN +IVGG TE NEYPWQVGL+++ ++ P+CGGTL++++ VLTAAHCT TA VLL +H+L + + V N+P+YNS T+ +DFS+L L +DF+ ++PACLP +N
Sbjct: 197 CGIANRATRIVGGVPTEVNEYPWQVGLVNA-GNNRPWCGGTLINDRWVLTAAHCTERQTAGNLQVLLRKHNLDSDANQVRKNVAQIVNHPSYNSATLTHDFSLLELSVPIDFSEFRNLVAPACLPADNN 324
BLAST of mRNA_Ecto-sp8_S_contig105753.904.1 vs. uniprot
Match: UPI0018858849 (trypsin-like n=1 Tax=Pollicipes pollicipes TaxID=41117 RepID=UPI0018858849) HSP 1 Score: 108 bits (270), Expect = 4.710e-26 Identity = 56/126 (44.44%), Postives = 81/126 (64.29%), Query Frame = 1
Query: 55 CRCGQANTKVKIVGGAATEENEYPWQVGLLSSQSSSTPFCGGTLVSNKEVLTAAHCTSGSTAA--YVLLGEHDLRRADGEKKIRVCGTTNNPNYNSRTVDYDFSILTLCEEVDFTTDISPACLPTS 426
C CG AN ++VGG E NEYPWQ GL+S + T +CGG+L++++ V+TAAHCTSG +A+ VLLG+H + ADGE + V ++P+Y + + YD S+L L V F + + CLPT+
Sbjct: 37 CSCGMANRASRVVGGVEAEVNEYPWQAGLVSPGGTRT-WCGGSLINDRYVVTAAHCTSGKSASGIQVLLGDHRISVADGESRHTVSQIIDHPSYVTYSQGYDISLLKLSSPVTFNSRRATVCLPTA 161 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig105753.904.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig105753.904.1 >prot_Ecto-sp8_S_contig105753.904.1 ID=prot_Ecto-sp8_S_contig105753.904.1|Name=mRNA_Ecto-sp8_S_contig105753.904.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=144bp PTPSPVPSPAPAPTPTGSCRCGQANTKVKIVGGAATEENEYPWQVGLLSSback to top mRNA from alignment at Ecto-sp8_S_contig105753:8..439- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig105753.904.1 ID=mRNA_Ecto-sp8_S_contig105753.904.1|Name=mRNA_Ecto-sp8_S_contig105753.904.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=432bp|location=Sequence derived from alignment at Ecto-sp8_S_contig105753:8..439- (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig105753:8..439- >mRNA_Ecto-sp8_S_contig105753.904.1 ID=mRNA_Ecto-sp8_S_contig105753.904.1|Name=mRNA_Ecto-sp8_S_contig105753.904.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=432bp|location=Sequence derived from alignment at Ecto-sp8_S_contig105753:8..439- (Ectocarpus species8 EcLAC_412)back to top |