mRNA_Ecto-sp8_S_contig1057.893.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig1057.893.1 vs. uniprot
Match: D7FWG8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWG8_ECTSI) HSP 1 Score: 681 bits (1757), Expect = 1.620e-247 Identity = 332/340 (97.65%), Postives = 333/340 (97.94%), Query Frame = 1
Query: 1 MATALFSRQPGCRRSRSWGRNVVHVSGGAMLLLMLGSVLAKAVRLNPESALQPADLTGRFGAESTTRNSWRGSRGSGGLQQQAEWATGDNTTSCSTPISMSGDHGESRGRFLRDHAVGIGVGVAAAMSYKSEPADALFEDFKKEGKCPTYKAVDNFDIDKYMGIWYELAYHDWTQIKICGCTRFNMTRTDDRIKDAFTTKCPYEADEGETFLINMREVIDRSSPGSFKEYAFYNKWDNKVVALWRSNEGQYERAIQLQCVEILGRRAFVGINFLSREPLVAPRAMSEMFQKAKALGLAGIGGSPAEMEIVRHEGCRYPTSSGNKESRSWGSAWGVNTLAL 1020
MATALFSRQ GCRRSRSWGRNVVH SGGAMLLLMLGSVLAKAVRLNPES LQPADLTGRFGAESTTRNSWRGSRGSGGLQQQAEWATGDNTTSCSTP SMSGDHGESRGRFLRDHAVGIGVGVAAAMSYKSEPA ALFEDFKKEGKCP YKAVDNFDIDKYMGIWYELAYHDWTQIKICGCTRFNMTRTDDRIKDAFTTKCPYEADEGETFLINMREVIDRSSPGSFKEYAFYNKWDNKVVALWR+ EGQYERAIQLQCVEILGRRAFVGINFLSREPLVAPRAMSEMFQKAKALGLAGIGGSPAEMEIVRHEGCRYPTSSGNKESRSWGSAWGVNTLAL
Sbjct: 1 MATALFSRQLGCRRSRSWGRNVVHASGGAMLLLMLGSVLAKAVRLNPESTLQPADLTGRFGAESTTRNSWRGSRGSGGLQQQAEWATGDNTTSCSTPNSMSGDHGESRGRFLRDHAVGIGVGVAAAMSYKSEPAGALFEDFKKEGKCPAYKAVDNFDIDKYMGIWYELAYHDWTQIKICGCTRFNMTRTDDRIKDAFTTKCPYEADEGETFLINMREVIDRSSPGSFKEYAFYNKWDNKVVALWRTIEGQYERAIQLQCVEILGRRAFVGINFLSREPLVAPRAMSEMFQKAKALGLAGIGGSPAEMEIVRHEGCRYPTSSGNKESRSWGSAWGVNTLAL 340
BLAST of mRNA_Ecto-sp8_S_contig1057.893.1 vs. uniprot
Match: A0A6H5J6T5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6T5_9PHAE) HSP 1 Score: 311 bits (797), Expect = 3.460e-104 Identity = 153/160 (95.62%), Postives = 154/160 (96.25%), Query Frame = 1
Query: 556 MTRTDDRIKDAFTTKCPYEADEGETFLINMREVIDRSSPGSFKEYAFYNKWDNKV-----VALWRSNEGQYERAIQLQCVEILGRRAFVGINFLSREPLVAPRAMSEMFQKAKALGLAGIGGSPAEMEIVRHEGCRYPTSSGNKESRSWGSAWGVNTLAL 1020
MTRTDDRIKDAFTTKCP+EADEGETFLINMREVIDRSSPGSFKEYAFYNKWDNKV VALWRSNEGQYERAIQLQCVEILGRRAFVGINFLSREPLV PRAMSEMFQKAKALGLAGIGGSPAEMEIVRHEGCRYPTSSGNKESRSWGSAWGVNTLAL
Sbjct: 1 MTRTDDRIKDAFTTKCPHEADEGETFLINMREVIDRSSPGSFKEYAFYNKWDNKVPNRWVVALWRSNEGQYERAIQLQCVEILGRRAFVGINFLSREPLVPPRAMSEMFQKAKALGLAGIGGSPAEMEIVRHEGCRYPTSSGNKESRSWGSAWGVNTLAL 160
BLAST of mRNA_Ecto-sp8_S_contig1057.893.1 vs. uniprot
Match: A0A835Z448_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z448_9STRA) HSP 1 Score: 218 bits (556), Expect = 4.490e-66 Identity = 119/266 (44.74%), Postives = 152/266 (57.14%), Query Frame = 1
Query: 334 LRDHAVGIGVGVAAAMSYKSEPADALFEDFKKEGKCPTYKAVDN-----FDIDKYMGIWYELAYHDWTQIKICGCTRFNMTRTDDRIKDAFTTKCPYEADEGETFLINMREVIDRSSPGSFKEYAFYNKWDNKVVALWRSNEG-----------------------------QYERAIQLQCVEILGRRAFVGINFLSREPLVAPRAMSEMFQKAKALGLAGIGGSPAEMEIVRHEGCRYPTSSGN-----KESRSWGSAWGVNTL 1014
L+ A G V AAA S P+ ALFED KEG CP Y V FD+DKYMG+WYELAYHDWTQ ICGCTRFNMTR I+D FTT+CP G+T+ +NM I+ ++PG F E AFY W N V+ +W + Y +AIQ+QCVE++GRRAFVGINFLSR P+ + ++EM+++A+ LG+A GG+ AEME V H C+YP ++ N KE G+ GV L
Sbjct: 2 LQQLAKGAMVAGAAAAGDPS-PSAALFEDVLKEGGCPKYDEVKGPSVAAFDMDKYMGVWYELAYHDWTQYSICGCTRFNMTRRATTIEDMFTTQCPRSI--GQTYAVNMSMAINPATPGQFLEKAFYTDWPNMVLDVWAEGDAPAPALGAGXXXXXXXXXXXXXXXXGKPRRHYGKAIQMQCVEVMGRRAFVGINFLSRTPVTSDAELAEMWERAERLGIARYGGNRAEMERVDHTNCKYPRTTDNGVIFRKERAGLGALLGVKIL 264
BLAST of mRNA_Ecto-sp8_S_contig1057.893.1 vs. uniprot
Match: A0A6H5J7W2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7W2_9PHAE) HSP 1 Score: 207 bits (527), Expect = 6.480e-64 Identity = 107/118 (90.68%), Postives = 109/118 (92.37%), Query Frame = -2
Query: 27 MAAATPTPMPTAWSRRNLPRLSPWSPLMLIGVLQLVVLSPVAHSACCCSPPEPLLPRQLFLVVDSAPNLPVRSAG*SALSGLSRTALAKTDPNINKSIAPPLTCTTFLPQLLLLLQPG 380
MAAATPTPMPTAWSRRNLPRL WSPLMLIGVLQLVVLS VAHSACCCSPP PLL RQLFLVVDSAP LP+RSAG SALSGLSRTALAKTDPNIN+SIAPP TCTTFLPQ LLLLQPG
Sbjct: 1 MAAATPTPMPTAWSRRNLPRLPLWSPLMLIGVLQLVVLSLVAHSACCCSPPAPLLLRQLFLVVDSAPLLPIRSAGWSALSGLSRTALAKTDPNINQSIAPPHTCTTFLPQFLLLLQPG 118
BLAST of mRNA_Ecto-sp8_S_contig1057.893.1 vs. uniprot
Match: A0A7S3S6K5_9SPIT (Hypothetical protein n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3S6K5_9SPIT) HSP 1 Score: 152 bits (384), Expect = 1.050e-40 Identity = 81/204 (39.71%), Postives = 113/204 (55.39%), Query Frame = 1
Query: 436 KCPTYKAVDN-----FDIDKYMGIWYELAYHDWTQIKICGCTRFNMTRTDDRIKDAFTTKCPYEADE------------------GETFLINMREVIDRSSPGSFKEYAFYNKWDNKVVALWRSNEGQ------YERAIQLQCVEILGRR--AFVGINFLSREPLVAPRAMSEMFQKAKALGLAGIGGSPAEMEIVRHEGCRYP 954
KCP Y+ + + F++DKY+GIWYELA+HD TQ CGCT+FNMTR + I+D FT CP+ + G + NM + G +E F ++DN ++ +WR E Q Y RAIQ QCV + + F GINFLSR+P+++ + EMF +A++LGL G + +M IV HEGCRYP
Sbjct: 23 KCPVYEDIKSPTMPLFEVDKYVGIWYELAFHDITQANACGCTQFNMTRYGNTIEDMFTVTCPWPWKKNVDGPWLPGYSKVTGHRKGNQWTCNMTMFYQPARLGVMRETGFGQEFDNMILDIWRDPEIQAETGYEYTRAIQFQCVSVPPDQKITFTGINFLSRKPIISTNQLQEMFNRARSLGLEPYGSN--DMHIVEHEGCRYP 224
BLAST of mRNA_Ecto-sp8_S_contig1057.893.1 vs. uniprot
Match: A0A7S2QN97_9DINO (Hypothetical protein n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2QN97_9DINO) HSP 1 Score: 155 bits (392), Expect = 5.220e-39 Identity = 88/216 (40.74%), Postives = 119/216 (55.09%), Query Frame = 1
Query: 436 KCPTYKAVDN-----FDIDKYMGIWYELAYHDWTQIKICGCTRFNMTRTDDRIKDAFTTKCPYEADEG------------------ETFLINMREVIDRSSPGSFKEYAFYNKWDNKVVALWRSNEGQ------YERAIQLQCVEI---LGRRAFVGINFLSREPLVAPRAMSEMFQKAKALGLAGIGGSPAEMEIVRHEGCRYPTSSGNKESRSW 987
+CP Y+ + + F+IDKY+GIWYELA+HD TQ +CGCTRFNMTR I+D FT CP+ EG + NM G +E F ++DN V+ +WR + Q Y RAIQ QCVE G+ F GINFLSREP+V+ + EMF +A+ALGL G + +M I+ H+GC+YP+S+ R+W
Sbjct: 369 RCPVYEEIRSPTLPTFEIDKYIGIWYELAFHDITQANVCGCTRFNMTRHGVVIEDMFTVTCPWPWKEGVDGPWLPGYSEVSKKRRFNQWTCNMTMYYQPERLGVMRETGFGQEFDNMVLEIWRDPDMQTSTGYEYTRAIQFQCVEEPPGSGKITFTGINFLSREPVVSHGMLQEMFIRAQALGLEPYGSN--DMHIIDHQGCQYPSST----DRTW 578
BLAST of mRNA_Ecto-sp8_S_contig1057.893.1 vs. uniprot
Match: A0A812UA54_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. CCMP2456 TaxID=1519616 RepID=A0A812UA54_9DINO) HSP 1 Score: 145 bits (366), Expect = 7.720e-35 Identity = 86/217 (39.63%), Postives = 113/217 (52.07%), Query Frame = 1
Query: 409 LFEDFKKEGKCPTYKAVDN-----FDIDKYMGIWYELAYHDWTQIKICGCTRFNMTRTDDRIKDAFTTKCPYEADEG-----------------ETFLINMREVIDRSSPGSFKEYAFYNKWDNKVVALWRSNE------GQYERAIQLQCVEILGRR----AFVGINFLSREPLVAPRAMSEMFQKAKALGLAGIGGSPAEMEIVRHEGCRYPTSS 963
L E K +CP Y+ V + F++DKY+G+WYELA+HD TQ CGCTRFNMTR + I+D FT CP+ +G + NM + PG E F ++DN V+ +W E +Y RAIQ QC LG F GINFLSR P+V + EMF +A+ALGL G + +M +V H GCRYP S+
Sbjct: 1071 LLETPKGTLQCPKYEDVRSPTLPAFNVDKYVGVWYELAFHDITQCNGCGCTRFNMTRHGNIIEDMFTVTCPWPWKKGVDGPWLPGYNANGNRRMNMWTCNMTMYYKPAEPGVMLETGFGQEFDNMVLEIWSDPEITAETGYEYTRAIQFQC---LGSEQDGITFTGINFLSRVPIVKSSMLQEMFNRARALGLEPYGSN--DMHVVEHAGCRYPQST 1282
BLAST of mRNA_Ecto-sp8_S_contig1057.893.1 vs. uniprot
Match: A0A812Q573_9DINO (Hypothetical protein n=2 Tax=unclassified Symbiodinium TaxID=279888 RepID=A0A812Q573_9DINO) HSP 1 Score: 145 bits (365), Expect = 8.540e-35 Identity = 86/217 (39.63%), Postives = 113/217 (52.07%), Query Frame = 1
Query: 409 LFEDFKKEGKCPTYKAVDN-----FDIDKYMGIWYELAYHDWTQIKICGCTRFNMTRTDDRIKDAFTTKCPYEADEG-----------------ETFLINMREVIDRSSPGSFKEYAFYNKWDNKVVALWRSNE------GQYERAIQLQCVEILGRR----AFVGINFLSREPLVAPRAMSEMFQKAKALGLAGIGGSPAEMEIVRHEGCRYPTSS 963
L E K +CP Y+ V + F++DKY+G+WYELA+HD TQ CGCTRFNMTR + I+D FT CP+ +G + NM + PG E F ++DN V+ +W E +Y RAIQ QC LG F GINFLSR P+V + EMF +A+ALGL G + +M +V H GCRYP S+
Sbjct: 601 LLETPKGTLQCPKYEDVRSPTLPAFNVDKYVGVWYELAFHDITQCNGCGCTRFNMTRHGNIIEDMFTVTCPWPWKKGVDGPWLPGYNANGNRRMNMWTCNMTMYYKPAEPGVMLETGFGQEFDNMVLEIWSDPEITAETGYEYTRAIQFQC---LGSEQDGITFTGINFLSRIPIVKSSMLQEMFNRARALGLEPYGSN--DMHVVEHAGCRYPQST 812
BLAST of mRNA_Ecto-sp8_S_contig1057.893.1 vs. uniprot
Match: A0A813HQG5_POLGL (Hypothetical protein (Fragment) n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813HQG5_POLGL) HSP 1 Score: 142 bits (359), Expect = 2.040e-34 Identity = 82/200 (41.00%), Postives = 108/200 (54.00%), Query Frame = 1
Query: 436 KCPTYKAVDN-----FDIDKYMGIWYELAYHDWTQIKICGCTRFNMTRTDDRIKDAFTTKCPYEADEG------------------ETFLINMREVIDRSSPGSFKEYAFYNKWDNKVVALWRSNEGQYE------RAIQLQCV--EILGRRAFVGINFLSREPLVAPRAMSEMFQKAKALGLAGIGGSPAEMEIVRHEG 942
+CP Y+ V + FD DKY+GIWYELA+HD TQ CGCT+FNMTR D I+D FT CP+ G + NM I+ PG E F ++DN V+ +W+ E Q E RAIQ QC+ + G+ F GINFLSR P+++P + EMF +A+ALGL G + +M V HEG
Sbjct: 231 QCPAYEDVKSSRMPSFDADKYVGIWYELAFHDITQFNGCGCTQFNMTRRDLVIEDMFTVNCPWPWRSGVEGPWLPGFSKISGQRKLNLYTCNMTMYINPQRPGVMMETGFGQEFDNMVLEIWQDPEIQAETGYEFTRAIQFQCLGSPVDGQITFTGINFLSRVPIISPGMLQEMFVRARALGLEPFGAN--DMHKVEHEG 428
BLAST of mRNA_Ecto-sp8_S_contig1057.893.1 vs. uniprot
Match: A0A7S1QXP9_ALECA (Hypothetical protein (Fragment) n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1QXP9_ALECA) HSP 1 Score: 132 bits (331), Expect = 1.810e-32 Identity = 75/187 (40.11%), Postives = 98/187 (52.41%), Query Frame = 1
Query: 439 CPTYKAVDN-----FDIDKYMGIWYELAYHDWTQIKICGCTRFNMTRTDDRIKDAFTTKCPYEADEG-----------------ETFLINMREVIDRSSPGSFKEYAFYNKWDNKVVALWRSNE------GQYERAIQLQCVEILGRR----AFVGINFLSREPLVAPRAMSEMFQKAKALGLAGIG 903
CP Y + + FDIDKY+G+WYELA+HD TQ CGCT+FNMTR I+D FT CP+ EG + NM + + PG +E F +DN V+ +WR + +Y R+IQ QC LG F GINFLSR P+V+P + EMF +A+ALGL G
Sbjct: 101 CPAYDEIRSPRLPTFDIDKYIGVWYELAFHDITQFNACGCTQFNMTRHGTVIEDMFTVTCPWPWREGVEGPWLPGFGANGKRRGNLWSCNMTMFYNPAKPGVMQETGFGQSFDNMVLEIWRDPDITAKTGYEYTRSIQFQC---LGTEKEGITFTGINFLSRVPIVSPAMIQEMFVRARALGLEPYG 284 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig1057.893.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig1057.893.1 >prot_Ecto-sp8_S_contig1057.893.1 ID=prot_Ecto-sp8_S_contig1057.893.1|Name=mRNA_Ecto-sp8_S_contig1057.893.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=341bp MATALFSRQPGCRRSRSWGRNVVHVSGGAMLLLMLGSVLAKAVRLNPESAback to top mRNA from alignment at Ecto-sp8_S_contig1057:178..3950- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig1057.893.1 ID=mRNA_Ecto-sp8_S_contig1057.893.1|Name=mRNA_Ecto-sp8_S_contig1057.893.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=3773bp|location=Sequence derived from alignment at Ecto-sp8_S_contig1057:178..3950- (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig1057:178..3950- >mRNA_Ecto-sp8_S_contig1057.893.1 ID=mRNA_Ecto-sp8_S_contig1057.893.1|Name=mRNA_Ecto-sp8_S_contig1057.893.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=1023bp|location=Sequence derived from alignment at Ecto-sp8_S_contig1057:178..3950- (Ectocarpus species8 EcLAC_412)back to top |