mRNA_Ecto-sp8_S_contig105085.801.1 (mRNA) Ectocarpus species8 EcLAC_412

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp8_S_contig105085.801.1
Unique NamemRNA_Ecto-sp8_S_contig105085.801.1
TypemRNA
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Homology
BLAST of mRNA_Ecto-sp8_S_contig105085.801.1 vs. uniprot
Match: D8LP50_ECTSI (Heat shock protein 40 like protein/ DnaJ domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP50_ECTSI)

HSP 1 Score: 132 bits (333), Expect = 1.070e-37
Identity = 68/71 (95.77%), Postives = 70/71 (98.59%), Query Frame = 1
Query:    1 ARDLSASAAIKAASAAPVLDAKPLRETTMDEAKRTRYDYYRLLGVLVDCDPSEIKRAYRRLVLVHHPDKGG 213
            ARDLSASAAIKAASAAPVLDAKPLRETTMDEAKRTRYDYYRLLGVLVDCD SEI+RAYRRL+LVHHPDKGG
Sbjct:   88 ARDLSASAAIKAASAAPVLDAKPLRETTMDEAKRTRYDYYRLLGVLVDCDSSEIQRAYRRLMLVHHPDKGG 158          
BLAST of mRNA_Ecto-sp8_S_contig105085.801.1 vs. uniprot
Match: A0A545AAD6_9PEZI (J domain-containing protein n=4 Tax=Golovinomyces TaxID=184027 RepID=A0A545AAD6_9PEZI)

HSP 1 Score: 62.0 bits (149), Expect = 1.520e-9
Identity = 27/49 (55.10%), Postives = 36/49 (73.47%), Query Frame = 1
Query:   61 AKPLRETTMDEAKRTRYDYYRLLGVLVDCDPSEIKRAYRRLVLVHHPDK 207
            AK LR   +++ KR R DYY++LGV  D D S+IK+AYR+  +VHHPDK
Sbjct:  511 AKDLRAAELEQKKRLRKDYYKILGVEKDADASQIKKAYRKAAIVHHPDK 559          
BLAST of mRNA_Ecto-sp8_S_contig105085.801.1 vs. uniprot
Match: A0A0B1P951_UNCNE (Putative cytosolic j-domain-containing protein n=2 Tax=Erysiphe TaxID=5121 RepID=A0A0B1P951_UNCNE)

HSP 1 Score: 60.5 bits (145), Expect = 5.280e-9
Identity = 27/49 (55.10%), Postives = 35/49 (71.43%), Query Frame = 1
Query:   61 AKPLRETTMDEAKRTRYDYYRLLGVLVDCDPSEIKRAYRRLVLVHHPDK 207
            AK LR   +++ K  R DYY+LLGV  D D S+IK+AYR+  +VHHPDK
Sbjct:  410 AKELRTAELEQKKSMRKDYYKLLGVEKDADASQIKKAYRKAAIVHHPDK 458          
BLAST of mRNA_Ecto-sp8_S_contig105085.801.1 vs. uniprot
Match: A0A6A5QWN2_AMPQU (J domain-containing protein n=1 Tax=Ampelomyces quisqualis TaxID=50730 RepID=A0A6A5QWN2_AMPQU)

HSP 1 Score: 60.1 bits (144), Expect = 7.130e-9
Identity = 25/49 (51.02%), Postives = 36/49 (73.47%), Query Frame = 1
Query:   61 AKPLRETTMDEAKRTRYDYYRLLGVLVDCDPSEIKRAYRRLVLVHHPDK 207
            AK +R+  ++  K  R DYY++LG+  DC  +EIK+AYR+L +VHHPDK
Sbjct:  280 AKEIRDAELELKKSKRKDYYKILGLEKDCSETEIKKAYRKLAIVHHPDK 328          
BLAST of mRNA_Ecto-sp8_S_contig105085.801.1 vs. uniprot
Match: A0A316V1I9_9BASI (J domain-containing protein n=1 Tax=Jaminaea rosea TaxID=1569628 RepID=A0A316V1I9_9BASI)

HSP 1 Score: 60.1 bits (144), Expect = 7.240e-9
Identity = 26/50 (52.00%), Postives = 36/50 (72.00%), Query Frame = 1
Query:   64 KPLRETTMDEAKRTRYDYYRLLGVLVDCDPSEIKRAYRRLVLVHHPDKGG 213
            K L++  M   +  R DYY++LG+  DC+ SEIK+AYR+  L+HHPDKGG
Sbjct:  450 KELQQAEMLHKRSLRKDYYKILGLKRDCEDSEIKKAYRKQSLLHHPDKGG 499          
BLAST of mRNA_Ecto-sp8_S_contig105085.801.1 vs. uniprot
Match: UPI001B364517 (TPR-like protein n=1 Tax=Cucurbitaria berberidis CBS 394.84 TaxID=1168544 RepID=UPI001B364517)

HSP 1 Score: 59.7 bits (143), Expect = 9.930e-9
Identity = 24/49 (48.98%), Postives = 36/49 (73.47%), Query Frame = 1
Query:   61 AKPLRETTMDEAKRTRYDYYRLLGVLVDCDPSEIKRAYRRLVLVHHPDK 207
            AK +R+  ++  K  R DYY++LG+  DC  +E+K+AYR+L +VHHPDK
Sbjct:  514 AKEIRDAELELKKSKRKDYYKILGLSKDCTETEVKKAYRKLAIVHHPDK 562          
BLAST of mRNA_Ecto-sp8_S_contig105085.801.1 vs. uniprot
Match: F0XQ98_GROCL (And tpr domain containing protein n=1 Tax=Grosmannia clavigera (strain kw1407 / UAMH 11150) TaxID=655863 RepID=F0XQ98_GROCL)

HSP 1 Score: 59.7 bits (143), Expect = 9.980e-9
Identity = 26/49 (53.06%), Postives = 34/49 (69.39%), Query Frame = 1
Query:   61 AKPLRETTMDEAKRTRYDYYRLLGVLVDCDPSEIKRAYRRLVLVHHPDK 207
            AK LR   ++  K  R DYY++LGV  D D  EIK+AYR+L ++HHPDK
Sbjct:  622 AKELRRAELELKKSQRKDYYKILGVAKDADEKEIKKAYRKLAVIHHPDK 670          
BLAST of mRNA_Ecto-sp8_S_contig105085.801.1 vs. uniprot
Match: A0A2S4PQK5_9PEZI (J domain-containing protein n=1 Tax=Erysiphe pulchra TaxID=225359 RepID=A0A2S4PQK5_9PEZI)

HSP 1 Score: 59.7 bits (143), Expect = 1.010e-8
Identity = 27/49 (55.10%), Postives = 34/49 (69.39%), Query Frame = 1
Query:   61 AKPLRETTMDEAKRTRYDYYRLLGVLVDCDPSEIKRAYRRLVLVHHPDK 207
            AK LR   ++  K  R DYY+LLGV  D D S+IK+AYR+  +VHHPDK
Sbjct:  507 AKELRTAELEHKKSQRKDYYKLLGVEKDADASQIKKAYRKAAIVHHPDK 555          
BLAST of mRNA_Ecto-sp8_S_contig105085.801.1 vs. uniprot
Match: A0A1E3QBW0_LIPST (J domain-containing protein (Fragment) n=1 Tax=Lipomyces starkeyi NRRL Y-11557 TaxID=675824 RepID=A0A1E3QBW0_LIPST)

HSP 1 Score: 59.3 bits (142), Expect = 1.340e-8
Identity = 26/46 (56.52%), Postives = 33/46 (71.74%), Query Frame = 1
Query:   70 LRETTMDEAKRTRYDYYRLLGVLVDCDPSEIKRAYRRLVLVHHPDK 207
            LRE  ++  K  R DYY++LGV    D +EIKRAYR+L L+HHPDK
Sbjct:  345 LREAELEVKKAKRKDYYKILGVSKSADETEIKRAYRKLALIHHPDK 390          
BLAST of mRNA_Ecto-sp8_S_contig105085.801.1 vs. uniprot
Match: A0A6A6F8M1_9PEZI (J domain-containing protein n=4 Tax=Cercospora TaxID=29002 RepID=A0A6A6F8M1_9PEZI)

HSP 1 Score: 59.3 bits (142), Expect = 1.350e-8
Identity = 25/49 (51.02%), Postives = 36/49 (73.47%), Query Frame = 1
Query:   61 AKPLRETTMDEAKRTRYDYYRLLGVLVDCDPSEIKRAYRRLVLVHHPDK 207
            AK +R+  ++  K  R DYY++LGV  DC  ++IK+AYR+L +VHHPDK
Sbjct:  422 AKEVRDAELELKKSKRKDYYKILGVEKDCSDTDIKKAYRKLAVVHHPDK 470          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig105085.801.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LP50_ECTSI1.070e-3795.77Heat shock protein 40 like protein/ DnaJ domain co... [more]
A0A545AAD6_9PEZI1.520e-955.10J domain-containing protein n=4 Tax=Golovinomyces ... [more]
A0A0B1P951_UNCNE5.280e-955.10Putative cytosolic j-domain-containing protein n=2... [more]
A0A6A5QWN2_AMPQU7.130e-951.02J domain-containing protein n=1 Tax=Ampelomyces qu... [more]
A0A316V1I9_9BASI7.240e-952.00J domain-containing protein n=1 Tax=Jaminaea rosea... [more]
UPI001B3645179.930e-948.98TPR-like protein n=1 Tax=Cucurbitaria berberidis C... [more]
F0XQ98_GROCL9.980e-953.06And tpr domain containing protein n=1 Tax=Grosmann... [more]
A0A2S4PQK5_9PEZI1.010e-855.10J domain-containing protein n=1 Tax=Erysiphe pulch... [more]
A0A1E3QBW0_LIPST1.340e-856.52J domain-containing protein (Fragment) n=1 Tax=Lip... [more]
A0A6A6F8M1_9PEZI1.350e-851.02J domain-containing protein n=4 Tax=Cercospora Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig105085contigEcto-sp8_S_contig105085:1..337 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeFungi
Stop0
Start0
Seed ortholog score60.5
Seed ortholog evalue3.8e-07
Seed eggNOG ortholog226899.F0XQ98
Model size213
KEGG koko:K09527
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0005488,GO:0005515,GO:0006457,GO:0006458,GO:0008150,GO:0009987,GO:0030544,GO:0031072,GO:0051084,GO:0051085,GO:0061077
Exons2
EggNOG free text desc.Tetratricopeptide repeat
EggNOG OGs211NY@147550,38CD1@33154,3NV1Y@4751,3QQ9D@4890,3US0W@5151,COG0484@1,KOG0550@2759
Cds size213
COG Functional cat.O
Best tax levelOphiostomatales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03110
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681143149.5352492-CDS-Ecto-sp8_S_contig105085:0..1011681143149.5352492-CDS-Ecto-sp8_S_contig105085:0..101Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig105085 1..101 -
1681143149.5461092-CDS-Ecto-sp8_S_contig105085:225..3371681143149.5461092-CDS-Ecto-sp8_S_contig105085:225..337Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig105085 226..337 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig105085.801.1prot_Ecto-sp8_S_contig105085.801.1Ectocarpus species8 EcLAC_412polypeptideEcto-sp8_S_contig105085 1..337 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp8_S_contig105085.801.1

>prot_Ecto-sp8_S_contig105085.801.1 ID=prot_Ecto-sp8_S_contig105085.801.1|Name=mRNA_Ecto-sp8_S_contig105085.801.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=71bp
ARDLSASAAIKAASAAPVLDAKPLRETTMDEAKRTRYDYYRLLGVLVDCD
PSEIKRAYRRLVLVHHPDKGG
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mRNA from alignment at Ecto-sp8_S_contig105085:1..337-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp8_S_contig105085.801.1 ID=mRNA_Ecto-sp8_S_contig105085.801.1|Name=mRNA_Ecto-sp8_S_contig105085.801.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=337bp|location=Sequence derived from alignment at Ecto-sp8_S_contig105085:1..337- (Ectocarpus species8 EcLAC_412)
GCTCGTGATCTTTCCGCTTCTGCCGCCATCAAAGCTGCTTCTGCTGCTCC CGTGCTTGATGCAAAACCCCTTCGAGAGACGACCATGGACGAGGCCAAGC GGACGCGTTATGGTAAGAACACGAGCACAAGCAAATGTGTGTGTTCATGT TTGTTCATCTTTTCAGTCCACCCAACAGTTTTGCAATCCTTGTTTTTACT TATGCAAATCATCGAACGTACCCTCACCCTCGACAGACTACTACCGCCTT CTGGGGGTGCTCGTCGACTGCGACCCGTCGGAAATCAAGAGGGCCTATCG TCGCCTGGTGTTGGTGCATCATCCGGACAAGGGTGGT
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Coding sequence (CDS) from alignment at Ecto-sp8_S_contig105085:1..337-

>mRNA_Ecto-sp8_S_contig105085.801.1 ID=mRNA_Ecto-sp8_S_contig105085.801.1|Name=mRNA_Ecto-sp8_S_contig105085.801.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=213bp|location=Sequence derived from alignment at Ecto-sp8_S_contig105085:1..337- (Ectocarpus species8 EcLAC_412)
GCTCGTGATCTTTCCGCTTCTGCCGCCATCAAAGCTGCTTCTGCTGCTCC
CGTGCTTGATGCAAAACCCCTTCGAGAGACGACCATGGACGAGGCCAAGC
GGACGCGTTATGACTACTACCGCCTTCTGGGGGTGCTCGTCGACTGCGAC
CCGTCGGAAATCAAGAGGGCCTATCGTCGCCTGGTGTTGGTGCATCATCC
GGACAAGGGTGGT
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