mRNA_Ecto-sp8_S_contig105076.798.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig105076.798.1 vs. uniprot
Match: A0A1W6K7Z1_9GAMM (Flagellin n=15 Tax=Marinobacter TaxID=2742 RepID=A0A1W6K7Z1_9GAMM) HSP 1 Score: 291 bits (744), Expect = 3.600e-94 Identity = 171/171 (100.00%), Postives = 171/171 (100.00%), Query Frame = 1
Query: 1 QTVSLTLSNGSSSATISAQITDANDLSAIAREVNAASGKTGITAEVANDGSITLIQEQGKDITIEDFTAAGSQQLAVQGSGDPSAIELTSGGANATRVAGELTLDSSVSFAATSDATLAAGSVLNSAQNTAAGSTPEEVAGIDISTVDGATSALAVVDAALETISGIRADL 513
QTVSLTLSNGSSSATISAQITDANDLSAIAREVNAASGKTGITAEVANDGSITLIQEQGKDITIEDFTAAGSQQLAVQGSGDPSAIELTSGGANATRVAGELTLDSSVSFAATSDATLAAGSVLNSAQNTAAGSTPEEVAGIDISTVDGATSALAVVDAALETISGIRADL
Sbjct: 263 QTVSLTLSNGSSSATISAQITDANDLSAIAREVNAASGKTGITAEVANDGSITLIQEQGKDITIEDFTAAGSQQLAVQGSGDPSAIELTSGGANATRVAGELTLDSSVSFAATSDATLAAGSVLNSAQNTAAGSTPEEVAGIDISTVDGATSALAVVDAALETISGIRADL 433
BLAST of mRNA_Ecto-sp8_S_contig105076.798.1 vs. uniprot
Match: A0A2A5LZ39_9GAMM (Flagellin n=2 Tax=unclassified Marinobacter TaxID=83889 RepID=A0A2A5LZ39_9GAMM) HSP 1 Score: 236 bits (603), Expect = 5.280e-73 Identity = 135/172 (78.49%), Postives = 160/172 (93.02%), Query Frame = 1
Query: 1 QTVSLTLSNGSSSATISAQITDANDLSAIAREVNAASGKTGITAEVANDGSITLIQEQGKDITIEDFTAAGSQQLAVQGSGDPSAIELTSGGANATRVAGELTLDSSVSFAATSDATLAAGSVLNSAQ-NTAAGSTPEEVAGIDISTVDGATSALAVVDAALETISGIRADL 513
QT+SLT+SNGSSSAT+SAQITDA+DLSA+ARE+N+A+GKTGITAEV +DGSITL+Q QGKDI + DFTA+GS+QLAVQGSGDPSAIELT+G AN+TRV GE+TLDS+VSFAA+SDAT AAGS+LN+A NTA+GST E VA +DISTV+GAT+ALAV+DAALETISGIRADL
Sbjct: 263 QTISLTVSNGSSSATVSAQITDASDLSALAREINSATGKTGITAEVESDGSITLVQPQGKDIALSDFTASGSEQLAVQGSGDPSAIELTNGAANSTRVGGEITLDSAVSFAASSDATAAAGSMLNNAAANTASGSTTEAVADVDISTVEGATNALAVIDAALETISGIRADL 434
BLAST of mRNA_Ecto-sp8_S_contig105076.798.1 vs. uniprot
Match: A0A2S5ZFQ9_9GAMM (Flagellin n=1 Tax=Marinobacter maroccanus TaxID=2055143 RepID=A0A2S5ZFQ9_9GAMM) HSP 1 Score: 195 bits (495), Expect = 7.110e-57 Identity = 120/180 (66.67%), Postives = 141/180 (78.33%), Query Frame = 1
Query: 1 QTVSLTLSNGSSSATISAQITDANDLSAIAREVNAASGKTGITAEVANDGSITLIQEQGKDITIEDFTAAGSQQLAVQGSGDPSAIELTSGGANAT---RVAGELTLDSSVSFAATSDATLAA------GSVLNSAQNTAAGSTPEEVAGIDISTVDGATSALAVVDAALETISGIRADL 513
QT++LT+SNG SSATISAQI+DANDLS +A+E+N+ASG+TGITAEV +DGSITL+ GKD+ IE+FTAA QLAVQGS DPSA ELTSG T RVAGE+T DS+VSFA S A A GS+L A NT+ GS PE+VA IDIS+V+GAT ALA+VDAALETISGIRADL
Sbjct: 263 QTITLTVSNGESSATISAQISDANDLSPLAKEINSASGRTGITAEVEDDGSITLVHPTGKDVLIENFTAADGDQLAVQGSADPSATELTSGPTAPTDSVRVAGEITFDSAVSFAVQSSAAPTAPGGADTGSILGVAANTSVGSNPEDVASIDISSVEGATDALAIVDAALETISGIRADL 442
BLAST of mRNA_Ecto-sp8_S_contig105076.798.1 vs. uniprot
Match: UPI001C970472 (flagellin n=1 Tax=Marinobacter nauticus TaxID=2743 RepID=UPI001C970472) HSP 1 Score: 171 bits (434), Expect = 5.340e-48 Identity = 105/173 (60.69%), Postives = 135/173 (78.03%), Query Frame = 1
Query: 4 TVSLTLSNGSSSATISAQITDANDLSAIAREVNAASGKTGITAEVANDGSITLIQEQGKDITIEDFT--AAGSQQLAVQGSGDPSAIELTSGGANATRVAGELTLDSSVSFAATSDATLAAGSVLNSAQ-NTAAGSTPEEVAGIDISTVDGATSALAVVDAALETISGIRADL 513
TVS+T+ +GS S+TISAQI+D NDLS +ARE+NAASGKTG+TAEV DG++TLIQE G+DI +E+FT A + + QGS D + LTSGG ++ R +GELT DS+VSFA +S AGSV N+A NTA GSTPE VA +DIS+ +GAT+AL+++DAALET+SGIRADL
Sbjct: 259 TVSMTIGSGSQSSTISAQISDVNDLSPLAREINAASGKTGVTAEV-KDGTLTLIQENGRDIVLENFTTNATPANTVNFQGSADAAPTALTSGGNDSIRASGELTFDSAVSFAVSSSVGAGAGSVFNNAAGNTAIGSTPETVASVDISSFEGATNALSILDAALETVSGIRADL 430
BLAST of mRNA_Ecto-sp8_S_contig105076.798.1 vs. uniprot
Match: UPI001C56EC58 (flagellin n=1 Tax=Marinobacter adhaerens TaxID=1033846 RepID=UPI001C56EC58) HSP 1 Score: 166 bits (419), Expect = 1.040e-45 Identity = 109/184 (59.24%), Postives = 126/184 (68.48%), Query Frame = 1
Query: 1 QTVSLTLSNGSSSATISAQITDANDLSAIAREVNAASGKTGITAEVANDGSITLIQEQGKDITIEDFTAAGSQQLAVQGSGDPSAIELTSGGANA-----TRVAGELTLDSSVSFAATSDATLAA--------GSVLNSAQNTAAGSTPEEVAGIDISTVDGATSALAVVDAALETISGIRADL 513
QTV++T+SNG +SAT+ +DLS +A E+N ASG+TGI AEV NDGSI L+ GKDI IEDFTA ++ + VQGS DP+ LTSG A RV+GELT DSSVSFA S A GSVLN A +TA GSTPE VAGIDISTVDGAT +LAVVDAALE IS IRADL
Sbjct: 260 QTVTMTISNGETSATVXXXXXXXSDLSPLANEINRASGRTGINAEVNNDGSIKLVHPSGKDIVIEDFTAGDTETIEVQGSSDPNPETLTSGPTGAPTDDSVRVSGELTFDSSVSFALQSTAAQTVSDPIVANEGSVLNVAADTADGSTPENVAGIDISTVDGATDSLAVVDAALERISSIRADL 443
BLAST of mRNA_Ecto-sp8_S_contig105076.798.1 vs. uniprot
Match: A0A1H3DED0_9GAMM (Flagellin n=2 Tax=Marinobacter TaxID=2742 RepID=A0A1H3DED0_9GAMM) HSP 1 Score: 163 bits (413), Expect = 6.590e-45 Identity = 102/176 (57.95%), Postives = 133/176 (75.57%), Query Frame = 1
Query: 4 TVSLTLSNGSSSATISAQITDANDLSAIAREVNAASGKTGITAEVANDGSITLIQEQGKDITIEDFTAAGSQQ-LAVQGSGDPSAIELTSGGA-----NATRVAGELTLDSSVSFAATSDATLAAGSVLNSAQNTAAGSTPEEVAGIDISTVDGATSALAVVDAALETISGIRADL 513
TV++TLS+G ATISAQI+D +DL +A+E+NAASGKTGITAEV DG +TL+QEQGKDI +EDF+ G+ ++ +G + A +T GA +++R GE+T DS+VSFA +S AAGS+LN A +TA GS PE+V+GIDIS+ +GAT ALA+VDAALETISGIRADL
Sbjct: 259 TVAITLSSGGEKATISAQISDVDDLRPLAKEINAASGKTGITAEVV-DGRLTLVQEQGKDILLEDFSTNGAATTVSFRGGAELDAAAITLDGAPGSVTDSSRATGEITFDSAVSFAVSSSVADAAGSILNVAADTAVGSVPEDVSGIDISSFEGATDALAIVDAALETISGIRADL 433
BLAST of mRNA_Ecto-sp8_S_contig105076.798.1 vs. uniprot
Match: A0A2E5MME1_9ALTE (Flagellin n=1 Tax=Alteromonadaceae bacterium TaxID=1916082 RepID=A0A2E5MME1_9ALTE) HSP 1 Score: 156 bits (394), Expect = 3.890e-42 Identity = 102/177 (57.63%), Postives = 129/177 (72.88%), Query Frame = 1
Query: 4 TVSLTLSNGSSSATISAQITDANDLSAIAREVNAASGKTGITAEVANDGSITLIQEQGKDITIEDF-TAAGSQQLAVQGSGDPSAIELTSGGANA-----TRVAGELTLDSSVSFAATSDATLAAGSVLNSAQ-NTAAGSTPEEVAGIDISTVDGATSALAVVDAALETISGIRADL 513
TVS+T+S+G AT+SAQI D DLS +ARE+N+A+GKTGITAEV DG + QE+GKDI +EDF T AG+ + +G + +T GA A TRV+G++T DSS SFA +S T AAGS+L++A NTA GST E+V+GIDIST GAT ALA+VDAALE+ISGIRADL
Sbjct: 259 TVSMTISSGGEKATVSAQIDDVTDLSPLAREINSAAGKTGITAEV-QDGRLIFTQEEGKDILVEDFSTNAGTATASFKGEAEADGDAITLSGAPASTTDSTRVSGQITFDSSSSFAVSSSITAAAGSILDTATANTAIGSTTEDVSGIDISTFQGATDALAIVDAALESISGIRADL 434
BLAST of mRNA_Ecto-sp8_S_contig105076.798.1 vs. uniprot
Match: UPI0014082506 (flagellin n=1 Tax=Marinobacter caseinilyticus TaxID=2692195 RepID=UPI0014082506) HSP 1 Score: 155 bits (391), Expect = 1.040e-41 Identity = 105/176 (59.66%), Postives = 124/176 (70.45%), Query Frame = 1
Query: 4 TVSLTLSNGSSSATISAQITDANDLSAIAREVNAASGKTGITAEVANDGSITLIQEQGKDITIEDF-TAAGSQQLAVQGSG--DPSAIELTSGGANAT---RVAGELTLDSSVSFAATSDATLAAGSVLNSAQNTAAGSTPEEVAGIDISTVDGATSALAVVDAALETISGIRADL 513
T SLT+S+G ATISAQI D DL +ARE+NAASGKTGITAEV DG + L+QE+GKDI +EDF T A + + +G D SAI L A+ T R +GE+T DSSVSFA SD AAGSVLN +TA GST E+++ IDIST GAT +LAVVDAALE ISGIRADL
Sbjct: 259 TFSLTVSSGGEKATISAQIDDVADLRPLAREINAASGKTGITAEV-EDGRLILVQEEGKDILVEDFSTNAATTTASFRGGAELDASAITLDGAAASVTDSSRASGEITFDSSVSFAIRSDVAAAAGSVLNVVADTAVGSTKEDISSIDISTFQGATDSLAVVDAALEIISGIRADL 433
BLAST of mRNA_Ecto-sp8_S_contig105076.798.1 vs. uniprot
Match: UPI000F8555B3 (flagellin n=1 Tax=Marinobacter salarius TaxID=1420917 RepID=UPI000F8555B3) HSP 1 Score: 155 bits (391), Expect = 1.230e-41 Identity = 104/176 (59.09%), Postives = 128/176 (72.73%), Query Frame = 1
Query: 4 TVSLTLSNGSSSATISAQITDANDLSAIAREVNAASGKTGITAEVANDGSITLIQEQGKDITIEDF-TAAGSQQLAVQGSG--DPSAIELTSGGANAT---RVAGELTLDSSVSFAATSDATLAAGSVLNSAQNTAAGSTPEEVAGIDISTVDGATSALAVVDAALETISGIRADL 513
T ++TLS+G AT+SAQI D +DLS +ARE+NAASG TGITAE+ DG + LIQEQGKDI +EDF T A + ++ +GS D AI L+ A+ T R +GE+T DSSVSFA +S AGS+L+ A +TA GST E+V+ IDI TV GAT ALAVVDAALETISGIRADL
Sbjct: 270 TYTMTLSSGGEKATVSAQIQDVSDLSPLAREINAASGSTGITAEI-EDGRLVLIQEQGKDILLEDFSTNAETTDVSFRGSSEVDGDAITLSGAAASTTDSARASGEITFDSSVSFAVSSGEDDTAGSILDVAGSTAVGSTKEDVSSIDIGTVQGATDALAVVDAALETISGIRADL 444
BLAST of mRNA_Ecto-sp8_S_contig105076.798.1 vs. uniprot
Match: UPI000DAE9DA2 (flagellin n=2 Tax=Marinobacter TaxID=2742 RepID=UPI000DAE9DA2) HSP 1 Score: 148 bits (373), Expect = 4.210e-39 Identity = 94/175 (53.71%), Postives = 124/175 (70.86%), Query Frame = 1
Query: 4 TVSLTLSNGSSSATISAQITDANDLSAIAREVNAASGKTGITAEVANDGSITLIQEQGKDITIEDFTAAGSQQLA-----VQGSGDPSAIELTSGGANATRVAGELTLDSSVSFAATSDATLAAGSVLNSAQNTAAGSTPEEVAGIDISTVDGATSALAVVDAALETISGIRADL 513
TVS+T+S+G +TISAQI D +DL +ARE+N+ASG TGITAEV DG +TL+Q +GKDI +EDFT+ + A + GD ++ + A++ R +GE+T DSS SFA +S AGS+L+ A TA GST E+V+ IDISTV+GA SA+AV+DAALE ISGIRADL
Sbjct: 260 TVSMTISSGGEKSTISAQIDDVDDLRPLAREINSASGTTGITAEV-EDGRLTLVQAEGKDILVEDFTSNATTPTASFRGGAEVDGDAITLDGSDDTADSARASGEITFDSSSSFAVSSSIDDTAGSILDEAGGTAVGSTTEDVSSIDISTVEGANSAIAVIDAALEKISGIRADL 433 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig105076.798.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig105076.798.1 >prot_Ecto-sp8_S_contig105076.798.1 ID=prot_Ecto-sp8_S_contig105076.798.1|Name=mRNA_Ecto-sp8_S_contig105076.798.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=171bp QTVSLTLSNGSSSATISAQITDANDLSAIAREVNAASGKTGITAEVANDGback to top mRNA from alignment at Ecto-sp8_S_contig105076:3..515+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig105076.798.1 ID=mRNA_Ecto-sp8_S_contig105076.798.1|Name=mRNA_Ecto-sp8_S_contig105076.798.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=513bp|location=Sequence derived from alignment at Ecto-sp8_S_contig105076:3..515+ (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig105076:3..515+ >mRNA_Ecto-sp8_S_contig105076.798.1 ID=mRNA_Ecto-sp8_S_contig105076.798.1|Name=mRNA_Ecto-sp8_S_contig105076.798.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=513bp|location=Sequence derived from alignment at Ecto-sp8_S_contig105076:3..515+ (Ectocarpus species8 EcLAC_412)back to top |