mRNA_Ecto-sp8_S_contig10503.792.1 (mRNA) Ectocarpus species8 EcLAC_412
|
Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig10503.792.1 vs. uniprot
Match: D8LN78_ECTSI (Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN78_ECTSI) HSP 1 Score: 770 bits (1988), Expect = 3.920e-263 Identity = 389/401 (97.01%), Postives = 395/401 (98.50%), Query Frame = 1
Query: 61 AQAPSPESATPTMADGGGRAALEGQRTGTSRPDEAGGGGDRGGWDVPHHWVGGAAMSPAAVRKTASLALQRAAQLQMVQEELEKISFRAREALEEVEVDASLVGVGDIIGSGTFAQVRQGRLFDTMGVVGTGAAKVAVKIPRDARRSTLKHFWFEVLIMKDFNHPNIVRLLRATWRGPRLMMILEYVSRGNLAKVLEETPVLSWPRHKFRMCLDIANGMAYLHRFRHFNELSNSMHDCIIHRDLKPQNLLVTHDYRVKISDFGAATGRGNDPRDTQVGTLLYIAPEIVRGDCYDERCDIYSFAVVLLAMLQLKDDIVTVFAEEAVRRGSTPPAGMGWVGGGLTHMAITNQIVNEGLRPTLPSEVFQTLRILIEQCWAPIAVMRPTFEEIVEFLETIARDEV 1263
A+APS ES TPTMADGGGRAALEGQRTGTSRPDEAGGGGDRGGWDVPHHWVGGAA+SPAAVRKTASLALQ A QLQMVQEELEKISFRAREALEEVEVDASLVGVG+IIGSGTFAQVRQGRLFDTMGVVGTGAAKVAVKIPRDARRSTLKHFWFEVLIMKDFNHPNIVRLLRATWRGPRLMMILEYVSRGNLAKVLEETPVLSWPRHKFRMCLDIANGMAYLHRF HFNELSNSMHDCIIHRDLKPQNLLVTHDYRVKISDFGAATGRGNDPRDTQVGTLLYIAPEIVRGDCYDERCDIYSFAVVLLAMLQLKDD+VTVFAEEAVRRGSTPPAG+GWVGGGLTHMAITNQIVNEGLRPTLPSEVFQTLRILIEQCWAPI VMRPTFEEIVEFLETIARDE+
Sbjct: 784 AEAPSSESETPTMADGGGRAALEGQRTGTSRPDEAGGGGDRGGWDVPHHWVGGAAISPAAVRKTASLALQSAPQLQMVQEELEKISFRAREALEEVEVDASLVGVGEIIGSGTFAQVRQGRLFDTMGVVGTGAAKVAVKIPRDARRSTLKHFWFEVLIMKDFNHPNIVRLLRATWRGPRLMMILEYVSRGNLAKVLEETPVLSWPRHKFRMCLDIANGMAYLHRFTHFNELSNSMHDCIIHRDLKPQNLLVTHDYRVKISDFGAATGRGNDPRDTQVGTLLYIAPEIVRGDCYDERCDIYSFAVVLLAMLQLKDDVVTVFAEEAVRRGSTPPAGVGWVGGGLTHMAITNQIVNEGLRPTLPSEVFQTLRILIEQCWAPIPVMRPTFEEIVEFLETIARDEI 1184
BLAST of mRNA_Ecto-sp8_S_contig10503.792.1 vs. uniprot
Match: A0A6H5JK37_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK37_9PHAE) HSP 1 Score: 766 bits (1978), Expect = 6.750e-261 Identity = 392/421 (93.11%), Postives = 402/421 (95.49%), Query Frame = 1
Query: 1 AARTRAVGSRAWSESSSPAPAQAPSPESATPTMADGGGRAALEGQRTGTSRPDEAGGGGDRGGWDVPHHWVGGAAMSPAAVRKTASLALQRAAQLQMVQEELEKISFRAREALEEVEVDASLVGVGDIIGSGTFAQVRQGRLFDTMGVVGTGAAKVAVKIPRDARRSTLKHFWFEVLIMKDFNHPNIVRLLRATWRGPRLMMILEYVSRGNLAKVLEETPVLSWPRHKFRMCLDIANGMAYLHRFRHFNELSNSMHDCIIHRDLKPQNLLVTHDYRVKISDFGAATGRGNDPRDTQVGTLLYIAPEIVRGDCYDERCDIYSFAVVLLAMLQLKDDIVTVFAEEAVRRGSTPPAGMGWVGGGLTHMAITNQIVNEGLRPTLPSEVFQTLRILIEQCWAPIAVMRPTFEEIVEFLETIARDEV 1263
AARTRAVGSRAW ESSSPAPAQAPS ESA PTMAD GG A E + T TSRP+ AGGGGDRGGWDVPHHWVGGAA+SPAAVRKTASLALQRAAQLQMVQEELE IS RAREALEEVEVDASLV +G+IIGSGTFAQVRQGRLFDT GVVGTGAAKVAVKIPRDAR STLKHFWFEVLIMK FNHPNIVRLLRATWRGPRLMMILE+VSRGNLAKVLEETPVLSWPRHKFRMCLDIANGMAYLHRF+HFNELSNSMHDCIIHRDLKPQNLLVTHDYRVKISDFGAATGRGNDPRD QVGTLLYIAPEIVRGDCYDERCDIYSFAVVLLAMLQLKDD+VTVFAEEAVRRGSTPPAGMGWVGGGLTHMAITNQIVNEGLRPTLPSEVFQTLRILIEQCWAPI VMRPTFEEI+EFLETIARDE+
Sbjct: 833 AARTRAVGSRAWLESSSPAPAQAPSSESAPPTMADRGGIAGWESRNTRTSRPEAAGGGGDRGGWDVPHHWVGGAAISPAAVRKTASLALQRAAQLQMVQEELENISVRAREALEEVEVDASLVSMGEIIGSGTFAQVRQGRLFDTKGVVGTGAAKVAVKIPRDARPSTLKHFWFEVLIMKGFNHPNIVRLLRATWRGPRLMMILEFVSRGNLAKVLEETPVLSWPRHKFRMCLDIANGMAYLHRFKHFNELSNSMHDCIIHRDLKPQNLLVTHDYRVKISDFGAATGRGNDPRDIQVGTLLYIAPEIVRGDCYDERCDIYSFAVVLLAMLQLKDDVVTVFAEEAVRRGSTPPAGMGWVGGGLTHMAITNQIVNEGLRPTLPSEVFQTLRILIEQCWAPIPVMRPTFEEILEFLETIARDEI 1253
BLAST of mRNA_Ecto-sp8_S_contig10503.792.1 vs. uniprot
Match: A0A6V1QL76_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1QL76_HETAK) HSP 1 Score: 294 bits (752), Expect = 1.380e-92 Identity = 157/336 (46.73%), Postives = 216/336 (64.29%), Query Frame = 1
Query: 280 QLQMVQEELEKISFRAREALEEVEVDASLVGVGDIIGSGTFAQVRQGRLFDTMGVVGTGAAKVAVKIPRDARRSTLKHFWFEVLIMKDFNHPNIVRLLRATWRGPRLMMILEYVSRGNLAKVL--EETPVLSWPRHKFRMCLDIANGMAYLHRFRHFNELSNSMHDCIIHRDLKPQNLLVTHDYRVKISDFGAATGRGNDPRDTQVGTLLYIAPEIVRGDCYDERCDIYSFAVVLLAMLQLKDDIVTVFAEEAVRR-----GSTPPAGMGWVGGGLTHMAITNQIVNEGLRPTLPS-EVFQTLRILIEQCWAPIAVMRPTFEEIVEFLETIARDEV 1263
Q +++ E+E + + L+E+ +D + +G++IG+G FA+VR R + VAVK + + +++ F +EVL+MKD HPNI+ L+ A+W G +LMM++EY+ G++A L L+W HK M D+A GM YLH R+FNE +N+ CIIHRDLKPQNLLVT Y +KI+DFG A + + T VGTLLYIAPE+VRGD YDE+CD+YSFA+V+LA LQLK +IV VFAE + G PA T M IT +IVNE LRP LP ++F +L+ILIEQ W+P +RPTF+EI+E+LETI +DEV
Sbjct: 47 QRRLLDAEMENLPAETKSVLKEIAIDPREMELGEVIGTGAFAEVRACRY---------RGSTVAVKALHELSQESIRRFRYEVLLMKDLRHPNIILLIGASWVGNKLMMVVEYMECGSMADALTPNRPEPLNWKDHKLGMVCDVARGMTYLHHARYFNEAANAYETCIIHRDLKPQNLLVTRSYGIKITDFGEARSKNQNATMTAVGTLLYIAPEVVRGDRYDEKCDVYSFAIVMLAALQLKPNIVDVFAETIKQEHLASGGEAKPAT-------YTPMYITTRIVNEHLRPILPDRQIFPSLKILIEQAWSPAPALRPTFDEILEYLETIVKDEV 366
BLAST of mRNA_Ecto-sp8_S_contig10503.792.1 vs. uniprot
Match: A0A835ZFS3_9STRA (Kinase-like domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFS3_9STRA) HSP 1 Score: 216 bits (550), Expect = 1.960e-64 Identity = 119/223 (53.36%), Postives = 150/223 (67.26%), Query Frame = 1
Query: 352 VDASLVGVGDIIGSGTFAQVRQGRLFDTMGVVGTGAAKVAVKIPRDARRSTLKHFWFEVLIMKDFNHPNIVRLLRATWRGPRLMMILEYVSRGNLAKVLEETPVLSWPRHKFRMCLDIANGMAYLHRFRHFNELSNSMHDCIIHRDLKPQNLLVTHDYRVKISDFGAATGRGNDPRDTQVGTLLYIAPEIVRGDCYDERCDIYSFAVVLLAMLQLKDDIVTVF 1020
+DA+ + VG +IG G++A+VR+G T VAVK + A L+ F E+L+MKD HPNIV LL A+W RLMM++E RGNLA VL+ L+W R KF M DIA GMAYLH R+++E + + CIIHRDLKPQN+LVT +KI+DFG A ND TQVGTLLYIAPEIVRGD YDE+CD+YSFAVVLL MLQL++ + +F
Sbjct: 1 MDAARLEVGAVIGVGSYAEVRRGAYRGT---------PVAVKTLKAADARALQRFRAEILLMKDLRHPNIVMLLGASWSTGRLMMVVELFERGNLADVLDAAQ-LTW-RQKFSMLEDIARGMAYLHSARYYDEATQTYQTCIIHRDLKPQNMLVTATLGIKITDFGEARVVDNDYTMTQVGTLLYIAPEIVRGDKYDEKCDVYSFAVVLLGMLQLREHVFDLF 212
BLAST of mRNA_Ecto-sp8_S_contig10503.792.1 vs. uniprot
Match: A0A4D9DAM1_9STRA (Protein kinase domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DAM1_9STRA) HSP 1 Score: 211 bits (536), Expect = 1.120e-56 Identity = 134/373 (35.92%), Postives = 192/373 (51.47%), Query Frame = 1
Query: 310 KISFRAREALEEVEVDASLVGV---GDIIGSGTFAQVRQGRLFDTMGVVGTGAAKVAVKIPRDARRSTLKHFWFEVLIMKDFNHPNIVRLLRATWRGPRLMMILEYVSRGNLAKVLEETP-VLSWPRHKFRMCLDIANGMAYLHRFRHFNELSNSMHDCIIHRDLKPQNLLVTHDYRVKISDFGAATGRGNDPRDTQVGTLLYIAPEIVRGDCYDERCDIYSFAVVLLAMLQLKDDIVTVFAEEA--VRRGST-----------------------------PPAGMGWVGG--------------------GLTHMAITNQIVNEGLRPTLPSEVFQTLRILIEQCWAPIAVMRPTFEEIVEFLETIARDEV 1263
+++ + E L VEVD V + G IG G+F+ V +G ++ VA+K+ R + F E+++ KD HPN+V A+WR RL+M+++Y RG LA VL + L W K M L IA GMA+LH+ R+++ ++S C++HRDLKPQN+LVT Y V+I+DFG A ++ TQVGT L++APE+VRG+ Y E+CD+YSFAVVLLAML+L+ D++ VFAE V R T PP G+ G+ A+T IV + RP + +Q L+ LIE+CW P RP F +VE L+ R E+
Sbjct: 566 ELTEKQAELLRSVEVDMKDVVMKRRGGGIGQGSFSIVYKGYYQNS---------HVAIKVLRRVDERNFRRFLEEIMLHKDLRHPNVVMFRGASWRDGRLLMLIDYAGRGTLADVLRRSRGTLRWKPVKLNMALGIAKGMAFLHQTRYYDMWTSSYQRCVVHRDLKPQNILVTDSYHVQITDFGEARTVDHENTMTQVGTQLFVAPEVVRGERYSEKCDVYSFAVVLLAMLELRPDVLDVFAESLPEVERSETGITKERLKEPEGVEVTDACKTCPLNKANQPPPGVSLAQAQAAASTPEHECPLAQHKEFKGVVAHAVTRAIVYDDFRPPIKGCPYQGLKQLIEKCWIPDVNDRPGFAAVVEALDGRVRREI 929
BLAST of mRNA_Ecto-sp8_S_contig10503.792.1 vs. uniprot
Match: W7U3S3_9STRA (Protein kinase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U3S3_9STRA) HSP 1 Score: 197 bits (501), Expect = 7.340e-56 Identity = 115/297 (38.72%), Postives = 158/297 (53.20%), Query Frame = 1
Query: 529 LIMKDFNHPNIVRLLRATWRGPRLMMILEYVSRGNLAKVLEETP-VLSWPRHKFRMCLDIANGMAYLHRFRHFNELSNSMHDCIIHRDLKPQNLLVTHDYRVKISDFGAATGRGNDPRDTQVGTLLYIAPEIVRGDCYDERCDIYSFAVVLLAMLQLKDDIVTVFAEEA--VRRGST-----------------------------PPAGMGWVGG--------------------GLTHMAITNQIVNEGLRPTLPSEVFQTLRILIEQCWAPIAVMRPTFEEIVEFLETIARDEV 1263
++ KD HPN+V A+WR RL+M+++Y RG LA VL + L W K M L IA GMA+LH+ R+++ ++S C++HRDLKPQN+LVT Y V+I+DFG A ++ TQVGT L++APE+VRG+ Y E+CD+YSFAVVLLAML+L+ D++ VFAE V R T PP G+ G+ A+T IV + RP + +Q L+ LIE+CW P RP F +VE L+ R EV
Sbjct: 1 MLHKDLRHPNVVMFRGASWRDGRLLMLIDYAGRGTLADVLRRSKGTLRWKPVKLNMALGIAKGMAFLHQTRYYDMWTSSYQRCVVHRDLKPQNILVTDSYHVQITDFGEARTVDHENTMTQVGTQLFVAPEVVRGERYSEKCDVYSFAVVLLAMLELRPDVLDVFAESLPEVERSETGITKERLKEPEGVEVTDACKTCPLNKANQPPPGVSLAQAQAAASTPEHECPLAQHKEFKGVVAHAVTRAIVYDDFRPPIKGCPYQGLKTLIEKCWIPDVNDRPGFAAVVEALDGRVRREV 297
BLAST of mRNA_Ecto-sp8_S_contig10503.792.1 vs. uniprot
Match: K8YUM3_NANGC (Deah (Asp-glu-ala-his) box polypeptide 36 n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YUM3_NANGC) HSP 1 Score: 195 bits (495), Expect = 6.800e-51 Identity = 105/243 (43.21%), Postives = 152/243 (62.55%), Query Frame = 1
Query: 310 KISFRAREALEEVEVDASLVGV---GDIIGSGTFAQVRQGRLFDTMGVVGTGAAKVAVKIPRDARRSTLKHFWFEVLIMKDFNHPNIVRLLRATWRGPRLMMILEYVSRGNLAKVLEETP-VLSWPRHKFRMCLDIANGMAYLHRFRHFNELSNSMHDCIIHRDLKPQNLLVTHDYRVKISDFGAATGRGNDPRDTQVGTLLYIAPEIVRGDCYDERCDIYSFAVVLLAMLQLKDDIVTVFAE 1026
+++ + E L VEVD V + G IG G+F+ V +G ++ VA+K+ R + F E+++ KD HPN+V A+WR RL+M+++Y RG LA VL + L W K M L IA GMA+LH+ R+++ ++S C++HRDLKPQN+LVT Y V+I+DFG A ++ TQVGT L++APE+VRG+ Y E+CD+YSFAVVLLAML+L+ D++ VFAE
Sbjct: 564 ELTEKQAELLRSVEVDMKDVVMKRRGGGIGQGSFSIVYKGYYQNS---------HVAIKVLRRVDERNFRRFLEEIMLHKDLRHPNVVMFRGASWRDGRLLMLIDYAGRGTLADVLRRSKGTLRWKPVKLNMALGIAKGMAFLHQTRYYDMWTSSYQRCVVHRDLKPQNILVTDSYHVQITDFGEARTVDHENTMTQVGTQLFVAPEVVRGERYSEKCDVYSFAVVLLAMLELRPDVLDVFAE 797
BLAST of mRNA_Ecto-sp8_S_contig10503.792.1 vs. uniprot
Match: A0A7S2VW95_9STRA (Hypothetical protein n=1 Tax=Triparma pacifica TaxID=91992 RepID=A0A7S2VW95_9STRA) HSP 1 Score: 162 bits (409), Expect = 1.260e-39 Identity = 102/312 (32.69%), Postives = 162/312 (51.92%), Query Frame = 1
Query: 331 EALEEVEVDASLVGVGDIIGSGTFAQVRQGRLFDTMGVVGTGAAKVAVKIPRDARRSTLKHFWFEVLIMKDFNHPNIVRLLRATWRGPRLMMILEYVSRGNLAKVLEETPV-LSWPRHKFRMCLDIANGMAYLHRFRHFNELSNSMHDCIIHRDLKPQNLLVTHDYRVKISDFGAATGRGNDPRDTQVGTLLYIAPEIVRGDCYDERCDIYSFAVVLLAMLQLKDDIVTVFAEEAVRRGSTPPAGMGWVGGGLTHMA--ITNQIVNEGLRP-----TLPSEVFQTLRILIEQCWAPIAVMRPTFEEIVEFLE 1242
+AL+++ ++A + + +G G+F +V + G+A VAVK S+L F E+L+M D HPNIV ++ A W + +++EY +RG VL++ +W F+ LD + + YLH +F+ S + I+HRD+KP N L+T + VKI DFG + D TQVGT L++APE+V G+ YD +CDIYS A+ +L+ + ++T F A + G L+ A I+++++N RP T ++ QT+ L+ CW RPT EI E+LE
Sbjct: 949 DALQKILINAQDLVTEERVGKGSFGEVFKASY--------RGSA-VAVKTMTTVEMSSLDRFREEILLMADLRHPNIVSMIGACWEQDLMALVMEYCARGTATDVLKQNGEDFTWDDPLFKWVLDTSRALGYLHSVVYFDTKSQKSVNGIVHRDMKPDNCLITETFSVKIGDFGESKAILEDETMTQVGTPLFVAPEVVMGEQYDSKCDIYSLAMTILSFALKGEQLLTNFLHMAWVASFGENSDQGAKAAALSVNAGRISHKMINNQWRPSFKFITEELQMPQTIASLLLLCWDQDPTKRPTAREITEYLE 1251
BLAST of mRNA_Ecto-sp8_S_contig10503.792.1 vs. uniprot
Match: A0A7S2VVS9_9STRA (Hypothetical protein n=1 Tax=Triparma pacifica TaxID=91992 RepID=A0A7S2VVS9_9STRA) HSP 1 Score: 161 bits (408), Expect = 1.640e-39 Identity = 101/312 (32.37%), Postives = 160/312 (51.28%), Query Frame = 1
Query: 331 EALEEVEVDASLVGVGDIIGSGTFAQVRQGRLFDTMGVVGTGAAKVAVKIPRDARRSTLKHFWFEVLIMKDFNHPNIVRLLRATWRGPRLMMILEYVSRGNLAKVLEETPV-LSWPRHKFRMCLDIANGMAYLHRFRHFNELSNSMHDCIIHRDLKPQNLLVTHDYRVKISDFGAATGRGNDPRDTQVGTLLYIAPEIVRGDCYDERCDIYSFAVVLLAMLQLKDDIVTVFAEEAVRRGSTPPAGMGWVGGGLTHMA--ITNQIVNEGLRP-----TLPSEVFQTLRILIEQCWAPIAVMRPTFEEIVEFLE 1242
+AL ++ ++A + + IG G+F +V + + VAVK + S+L F E+L+M D HPNIV ++ A W + +++EY +RG VL++ +W F+ LD + + YLH +F+ S + I+HRD+KP N L+T + VKI DFG + D TQVGT L++APE+V G+ YD +CDIYS A+ +L+ + ++T F A + G L+ A I+++++N RP T ++ QT+ L+ CW RPT EI E+LE
Sbjct: 820 DALRKLLINAKDLVTEEQIGKGSFGEVFKASY---------RGSTVAVKTMKTVEMSSLDRFREEILLMADLRHPNIVSMIGACWEQDLMALVMEYCARGTATDVLKQNGEDFTWDDPLFKWVLDTSRALGYLHSVVYFDTKSQKSVNGIVHRDMKPDNCLITETFSVKIGDFGESKAILEDETMTQVGTPLFVAPEVVMGEQYDSKCDIYSLAMTILSFALKGEQLLTNFLHMAWVASFGENSDQGAKAAALSVNAGRISHKMINNQWRPSFKFITEELQMPQTIASLLLLCWDQDPTKRPTAREITEYLE 1122
BLAST of mRNA_Ecto-sp8_S_contig10503.792.1 vs. uniprot
Match: G4Z123_PHYSP (Protein kinase domain-containing protein n=5 Tax=Peronosporaceae TaxID=4777 RepID=G4Z123_PHYSP) HSP 1 Score: 152 bits (383), Expect = 3.780e-38 Identity = 106/320 (33.12%), Postives = 160/320 (50.00%), Query Frame = 1
Query: 319 FRAREALEEVEVDASLVGVGDIIGSGTFAQVRQGRLFDTMGVVGTGAAKVAVKIPRDARRSTLKHFWFEVLIMKDFNHPNIVRLLRATWRG-PRLMMILEYVSRGNLAKVLEETP-VLSWPRHKFRMCLDIANGMAYLHRFRHFNELSNSMHDCIIHRDLKPQNLLVTHDYRVKISDFGAATGRGNDPRDTQVGTLLYIAPEIVRGDCYDERCDIYSFAVVLLAMLQLKD----DIVTVFAEEAVRRGSTPPAGMGWVGGGLTHMAITNQIVNEGLRPTLPSEVFQTLRILIEQCWAPIAVMRPTFEEIVEFLETIARDE 1260
+ + L E++ + + + IIG+G F +V +G T VV + KI D L+ F E+ +M + HPNIV+ + A+W + + E++ RG+L VL ++W + RM +D + GMAYLH SM IIHRDLK N+LV+ + K+SDFG + + D + GT L++ PE++RG+ Y E+ D+YSF + +LA L + DI A GST L HM + E LRP+L ++R L ++C + +RPTFEEIV+FLE R E
Sbjct: 85 LESNKGLRMAEINFNDLKLQKIIGAGAFGEVIKGTYCGTPVVV---KRMLRNKITED----NLRMFGDEIQLMMNLRHPNIVQFIGASWNSYSNICFVTEFLERGDLFAVLRNPENKMTWAKPILRMTIDTSRGMAYLH----------SMKPPIIHRDLKSMNILVSSTWGAKVSDFGLSREKSVDETMSVTGTPLWLPPEMIRGERYTEKADVYSFGIAVLAELDTRKIPYHDIKAKGARNKKVSGST-----------LMHM-----VAYENLRPSLSKNCMDSVRDLYKRCTSDDQSVRPTFEEIVQFLENDVRKE 371 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig10503.792.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig10503.792.1 >prot_Ecto-sp8_S_contig10503.792.1 ID=prot_Ecto-sp8_S_contig10503.792.1|Name=mRNA_Ecto-sp8_S_contig10503.792.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=421bp AARTRAVGSRAWSESSSPAPAQAPSPESATPTMADGGGRAALEGQRTGTSback to top mRNA from alignment at Ecto-sp8_S_contig10503:396..6819- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig10503.792.1 ID=mRNA_Ecto-sp8_S_contig10503.792.1|Name=mRNA_Ecto-sp8_S_contig10503.792.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=6424bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10503:396..6819- (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig10503:396..6819- >mRNA_Ecto-sp8_S_contig10503.792.1 ID=mRNA_Ecto-sp8_S_contig10503.792.1|Name=mRNA_Ecto-sp8_S_contig10503.792.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=1263bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10503:396..6819- (Ectocarpus species8 EcLAC_412)back to top |