mRNA_Ecto-sp8_S_contig105.784.1 (mRNA) Ectocarpus species8 EcLAC_412

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp8_S_contig105.784.1
Unique NamemRNA_Ecto-sp8_S_contig105.784.1
TypemRNA
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Homology
BLAST of mRNA_Ecto-sp8_S_contig105.784.1 vs. uniprot
Match: A0A6H5LI82_9PHAE (Nucleotid_trans domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LI82_9PHAE)

HSP 1 Score: 309 bits (792), Expect = 8.280e-102
Identity = 155/264 (58.71%), Postives = 200/264 (75.76%), Query Frame = 3
Query:    3 PRSDPAVVMQVVSKDYIKLQRNFIRLMEKNSDFTRENLYLMCLDDESYRAIHGGMGIRCVPLTSLLRNNNRKQIFTLRVQVVSCLVKAGHDVILSDADALWLADPMKDFSLPTIRESSIVAARGGFPHDLAHQWGSTMCMGFIFFRAEGKRI-GEYVAVMNELVLKNANDQVSVNKAAKSLGIVWDKGGSDMRYEKSVTFGGGTIDSLVDDESRPFRVTLLPHSTYPRICEETPISENTRVAHCLWVGKGEVMST-WMKHANLW 788
            PRSDPA+VMQVVS+ Y++L+RNFIRLME NS  TR++LYLMC+D+ S       M IRC+PLT+     +  +I+ LR +VVSCLV+AG DVI+SDADALWL DP KDF+LP + +SS+VA+RG FP  L  +WG+TMCMGF+ FRA G+R+ GE++ VM+ LV KN +DQ+SVN AA++LGIVWD+  SDMRY +S +FG GTID+LVD+ ++PF VTLLPH+ Y R+C+ETPIS  T VAHC W  K     T WM  + LW
Sbjct:   53 PRSDPAIVMQVVSRHYLELERNFIRLMELNSALTRDHLYLMCMDNVSVHFFESSMNIRCIPLTAF-DFPSHAEIWVLRARVVSCLVEAGQDVIMSDADALWLDDPFKDFNLPRVIDSSVVASRGKFPKPLGLEWGATMCMGFVLFRATGRRVVGEFLEVMDALVHKNKDDQISVNLAAENLGIVWDQE-SDMRYVESDSFGFGTIDTLVDENNQPFSVTLLPHNAYTRVCDETPISNKTVVAHC-WAPKTADSKTGWMVQSKLW 313          
BLAST of mRNA_Ecto-sp8_S_contig105.784.1 vs. uniprot
Match: D8LK17_ECTSI (Nucleotid_trans domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK17_ECTSI)

HSP 1 Score: 259 bits (661), Expect = 1.120e-81
Identity = 151/296 (51.01%), Postives = 187/296 (63.18%), Query Frame = 3
Query:    3 PRSDPAVVMQVVSKDYIKLQRNFIRLMEKNSDFTRENLYLMCLDDESYRAIHGGMGIRCVPLTSLLRNNNRKQIFTLRVQVVSCLVKAGH-DVILSDADALWLADPMKD-FSLPTIRESSIVAARGGFPHDLAHQWGSTMCMGFIFFRAEGKR-IGEYVAVMNELVLKNANDQVSVNKAAKSLGIVWDKGGSDMRYEKSVTFGGGTIDSL----------------------------VDDESRPFRVTLLPHSTYPRICEETPISENTRV-AHCLWVGK-GEVMSTWMKHANLWS 791
            PRS PAVVMQVVS+ YI ++RNFIRLME+NS FTR N+YLMC+DD S       MGIRCVP+ S L     + I+ LRV+VVSCL++ G+ DVI+SDADALWLADP KD FS        IVA+RG +P+D   +WGST+CMGFI FRA     +  ++ VM +LV++N +DQ+SVN+AAK LGIVWDK  SDMRYE+S  +G G I  L                              +   PFRVTLLPHS Y R+C    +S  T V AHC +  K   V ++WMK ANLWS
Sbjct:   45 PRSRPAVVMQVVSEGYIDIERNFIRLMERNSGFTRRNIYLMCMDDASKNFFDTKMGIRCVPM-SALDLPTHEHIWQLRVRVVSCLLEIGNVDVIMSDADALWLADPAKDLFSRGDGGRGDIVASRGSWPNDQWKEWGSTLCMGFILFRARNVAGMKRFLDVMADLVVQNKDDQISVNRAAKQLGIVWDKN-SDMRYEESTGYGRGIIAGLGTSNNSTSGGGGDLFIGQTGHGVVVGRGTREVEAPFRVTLLPHSAYTRLCGRRTLSNQTTVVAHCYFPQKEAGVKTSWMKKANLWS 338          
BLAST of mRNA_Ecto-sp8_S_contig105.784.1 vs. uniprot
Match: A0A6H5KMQ8_9PHAE (Nucleotid_trans domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMQ8_9PHAE)

HSP 1 Score: 252 bits (644), Expect = 4.760e-79
Identity = 130/263 (49.43%), Postives = 175/263 (66.54%), Query Frame = 3
Query:    3 PRSDPAVVMQVVSKDYIKLQRNFIRLMEKNSDFTRENLYLMCLDDESYRAIHGGMGIRCVPLTSLLRNNNRKQIFTLRVQVVSCLVKAGHDVILSDADALWLADPMKDFSLPTIRESSIVAARGGFPHDLAHQWGSTMCMGFIFFRAEGKRIGEYVAVMNELVLKNANDQVSVNKAAKSLGIVWDKGGSDMRYEKSVTFGGGTIDSLVDDESRPFRVTLLPHSTYPRICEETPISENTRVAHCLWVGKGEVMSTWMKHANLWS 791
            PRS PAVV QVVS+ Y  L+ NFI  ME +S F+RENLYL+CLD+ES  AI  G+GIRCV    L    +R  ++ LRV+   CL+ AG DV++SDADA+WL DP  DF+     +S++VA+R   P  L H+WG+T+CMGF FFRA G  +  ++ V+ E+V +  +DQ +VN+A   LG+VWD   SDM +  S   G G I+++  +   P +VTLLPH+ Y R C  TPIS +T VAHC+   KGE M+TWMK A+LW+
Sbjct:   79 PRSSPAVVFQVVSEPYASLEANFISNMELHSTFSRENLYLVCLDEESV-AIFDGLGIRCVRYGCLGCPMSRLDVWVLRVEATLCLLNAGQDVLMSDADAIWLRDPTNDFASDLNMDSNVVASRAVMPFPLYHKWGATVCMGFAFFRAGGSAMQAFMTVVGEIVNELGDDQKAVNEALDKLGVVWDPT-SDMDFTNSTRPGTGVIENITANGD-PLKVTLLPHNKYTRSCRRTPISNDTIVAHCVSSDKGEGMATWMKEAHLWN 338          
BLAST of mRNA_Ecto-sp8_S_contig105.784.1 vs. uniprot
Match: D8LSV3_ECTSI (Nucleotid_trans domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSV3_ECTSI)

HSP 1 Score: 248 bits (634), Expect = 7.650e-77
Identity = 128/263 (48.67%), Postives = 172/263 (65.40%), Query Frame = 3
Query:    3 PRSDPAVVMQVVSKDYIKLQRNFIRLMEKNSDFTRENLYLMCLDDESYRAIHGGMGIRCVPLTSLLRNNNRKQIFTLRVQVVSCLVKAGHDVILSDADALWLADPMKDFSLPTIRESSIVAARGGFPHDLAHQWGSTMCMGFIFFRAEGKRIGEYVAVMNELVLKNANDQVSVNKAAKSLGIVWDKGGSDMRYEKSVTFGGGTIDSLVDDESRPFRVTLLPHSTYPRICEETPISENTRVAHCLWVGKGEVMSTWMKHANLWS 791
            P+  PAVV QVVSK Y+ +Q+NFI  ME +S F+REN+YL+CLD+ES  +  G +GIRCV    +    +R  ++ LR++V  CL+KAG DV++SDADA+WL DPM DF     R+SSIVA+RG  P  L   WG+T+CMGF+ FRA    I +++ V+ E   +  NDQ +VN A + L +VWD   SDM +  S   G G ++S+   ES    V+LLPH+ Y R C  TPIS  T VAHC+   KGE M+TWMK A+LW+
Sbjct:  137 PQLQPAVVFQVVSKAYVSVQKNFISNMELHSTFSRENMYLICLDEESVESF-GALGIRCVRFGCMGCPVSRHHVWALRIEVSVCLLKAGIDVLMSDADAVWLHDPMDDFDSDDYRDSSIVASRGAMPVPLFRTWGATICMGFVLFRAGSNAIYQFMEVVGEFTEELENDQQAVNLALQKLDVVWDPT-SDMSFSDSTRSGVGVVNSIYSGES--LTVSLLPHNKYTRSCRRTPISVETVVAHCISTDKGEGMATWMKEAHLWN 395          
BLAST of mRNA_Ecto-sp8_S_contig105.784.1 vs. uniprot
Match: D7FGV6_ECTSI (Acetyltransferase (Isoleucine patch superfamily protein) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGV6_ECTSI)

HSP 1 Score: 249 bits (635), Expect = 9.510e-77
Identity = 128/263 (48.67%), Postives = 172/263 (65.40%), Query Frame = 3
Query:    3 PRSDPAVVMQVVSKDYIKLQRNFIRLMEKNSDFTRENLYLMCLDDESYRAIHGGMGIRCVPLTSLLRNNNRKQIFTLRVQVVSCLVKAGHDVILSDADALWLADPMKDFSLPTIRESSIVAARGGFPHDLAHQWGSTMCMGFIFFRAEGKRIGEYVAVMNELVLKNANDQVSVNKAAKSLGIVWDKGGSDMRYEKSVTFGGGTIDSLVDDESRPFRVTLLPHSTYPRICEETPISENTRVAHCLWVGKGEVMSTWMKHANLWS 791
            PRS PAVV QVVS+ Y  L+ NFI  ME +S F+RENLYL+CLD+ES  AI  G+GIRCV    L    +R  I+ LR+ V  CL+ AG DV++SDADA+WL DP  D +     +S++VA+R   P  L H+WG+T+CMGF FFRA G  +  ++ V+ E+  +  NDQ++VN+A   L +VWD   SDM +  +   G G I+++  D     +VTLLPH+ Y R C  TPIS +T VAHC+   KGE M+TWMK A+LW+
Sbjct:  154 PRSSPAVVFQVVSEPYASLEENFISNMELHSTFSRENLYLVCLDEESV-AIFDGLGIRCVRYGCLGCPVSRGDIWVLRIDVTICLLNAGQDVLMSDADAIWLRDPTDDLASDAFLDSNVVASRAVMPFPLYHKWGATICMGFAFFRAGGSAMQAFMTVVEEIANELGNDQIAVNEALNKLDVVWDPM-SDMNFTDNTRPGTGVIENITVDGGS-LKVTLLPHNKYTRSCRRTPISNDTIVAHCVSSDKGEGMATWMKEAHLWN 413          
BLAST of mRNA_Ecto-sp8_S_contig105.784.1 vs. uniprot
Match: D7G4E2_ECTSI (Nucleotid_trans domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4E2_ECTSI)

HSP 1 Score: 218 bits (555), Expect = 5.910e-67
Identity = 104/180 (57.78%), Postives = 132/180 (73.33%), Query Frame = 3
Query:  258 VKAGHDVILSDADALWLADPMKDFSLPTIRESSIVAARGGFPHDLAHQWGSTMCMGFIFFRAEGKRIG--EYVAVMNELVLKNANDQVSVNKAAKSLGIVWDKGGSDMRYEKSVTFGGGTIDSLVDDESRPFRVTLLPHSTYPRICEETPISENTRVAHCLWVGKGEVMSTWMKHANLWS 791
            V+AGHDV++SDADALWLADPMKDFSLP +  SSIVA+RG FP ++ H WG+T+CMGFI FR    R+   E+V VMN LVL+  +DQ++VN AA+ LGIVW++  SDMRY +S  FG G IDSL DD+++PF VTLLPHS Y RIC  TP+S  T VAHC+     +  + WM   +LW+
Sbjct:   64 VEAGHDVMMSDADALWLADPMKDFSLPGVVGSSIVASRGSFPGEVGHVWGATICMGFILFRTTASRVAMREFVTVMNALVLEEKDDQIAVNIAARDLGIVWNQEDSDMRYTESTGFGVGFIDSLSDDDNQPFTVTLLPHSAYTRICASTPVSNTTVVAHCISSKTPQSKADWMHRMDLWA 243          
BLAST of mRNA_Ecto-sp8_S_contig105.784.1 vs. uniprot
Match: A0A6H5JTX9_9PHAE (Nucleotid_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTX9_9PHAE)

HSP 1 Score: 214 bits (545), Expect = 3.440e-64
Identity = 139/343 (40.52%), Postives = 178/343 (51.90%), Query Frame = 3
Query:   21 VVMQVVSKDYIKLQRNFIRLMEKNSDFTRENLYLMCLDDESYRAIHGGMGIRCVPLTSLLRNNNRKQIFTLRVQVVSCLVKAGH-DVILSDADALWLADPMKD-FSLPTIRESSIVAARGGFPHDLAHQWGSTMCMGFIFFRAEGKR-IGEYVAVMNELVLKNANDQ-----------------------------------------------------VSVNKAAKSLGIVWDKGGSDMRYEKSVTFGGGTIDSLVDDESR----------------------------PFRVTLLPHSTYPRICEETPISENTRV-AHCLWVGK-GEVMSTWMKHANLWS 791
            + + VVS+ YI ++RNFIRLME+NS FTR N+YLMC+D  S       MGIRCVP+ S L     + I+ LRV+VVSCL++ GH DVI+SDADALWLADP KD FS        I+A+RG +P++ + +WGST+CMGFI FRA     +  ++ VM +LV++N +DQ                                                     +SVN+AAK LGIVWDK  SDMRYE+S  +G G I  L    +                             PFRV LLPHS Y R C    +S  T V AHC +  K   V ++WMK ANLWS
Sbjct:    1 MTVPVVSEGYIDIERNFIRLMERNSGFTRSNIYLMCMDGASKNFFDAKMGIRCVPM-SALDLPTHQDIWQLRVKVVSCLLEVGHVDVIMSDADALWLADPAKDLFSRGGGGRGDIIASRGSWPNEQSKEWGSTLCMGFIVFRARNVAGMKRFLDVMADLVVQNKDDQMLCECATGVENDFCGFPASSRPRSNPTLTESAFCVAAPSPNASLILSIVSVEKISVNRAAKQLGIVWDKN-SDMRYEESTGYGRGVIAGLGSSNNSTSGGGGDLFIGQTGHGVVVGRGTREVEAPFRVILLPHSAYTRRCGRRTLSNQTTVVAHCYFPQKEAGVKTSWMKKANLWS 341          
BLAST of mRNA_Ecto-sp8_S_contig105.784.1 vs. uniprot
Match: D7FQM0_ECTSI (Nucleotid_trans domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQM0_ECTSI)

HSP 1 Score: 174 bits (440), Expect = 7.220e-51
Identity = 86/149 (57.72%), Postives = 112/149 (75.17%), Query Frame = 3
Query:   81 MEKNSDFTRENLYLMCLDDESYRAIHGGMGIRCVPLTSLLRNNNRKQIFTLRVQVVSCLVKAGHDVILSDADALWLADPMKDFSLPTIRESSIVAARGGFPHDLAHQWGSTMCMGFIFFRAEGKR--IGEYVAVMNELVLKNANDQVSV 521
            ME  + FTR +LYLMCLDD+S       MGI C+PL+ L   ++ +QI+ LRV+VVSCL +AGHDVI+SDADALWLADPMKDFSLP + +SSIVA+RG  P ++   WG+TMCMGFI FRA   R  +G++V VMN LV ++ +DQ++V
Sbjct:    1 MELRTSFTRNHLYLMCLDDDSLHFFESFMGIHCIPLSGL-NISSHEQIWVLRVRVVSCLAEAGHDVIMSDADALWLADPMKDFSLPGVIDSSIVASRGKKPKEVGKVWGATMCMGFILFRATANRTAMGKFVTVMNALVFESEDDQIAV 148          
BLAST of mRNA_Ecto-sp8_S_contig105.784.1 vs. uniprot
Match: A0A7S0SXH7_9STRA (Hypothetical protein (Fragment) n=2 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SXH7_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 3.790e-20
Identity = 58/204 (28.43%), Postives = 111/204 (54.41%), Query Frame = 3
Query:  120 LMCLDDESYRAIHGGMGIRCVPLTSLL------RNNNRKQIFTLRVQVVSCLVK-AGHDVILSDADALWLADPMKDFSLPTIRESSIVAARGGFPHDLAHQWGSTMCMGFIFFRAEGKR---IGEYVAVMNELV--LKNANDQVSVNKAAKSLGIVWDKGGSDMRYEKSVTFGGGTIDSL--VDDESRPFRVTLLPHSTYPRIC 689
            ++C+DD S+  +   +G+ CV   + +      +N+ +  I+  R++++S L+     DVIL+D D+LW+  P+ D S+ +   SSIV++R  +PH+L   WG+T+CMGFI+F+A+      + +    M++ +   +  +DQ++ N+      I W        ++K ++ G   I ++  +   +  + +TLLPH  Y R C
Sbjct:    1 IICIDDSSFNQLLD-IGLYCVLSNNFVSDKSFNKNDYKHNIWLRRIEILSHLINNENQDVILTDLDSLWINSPLNDISIHSA-SSSIVSSRAWWPHELWSVWGATLCMGFIYFKADEFSKYFVNKIYLTMSDNINNYRKVDDQITANEELYKNQIEW--------FDKPMSVGNNAIANIGSISYNNMSYSITLLPHYKYIRNC 194          
BLAST of mRNA_Ecto-sp8_S_contig105.784.1 vs. uniprot
Match: A0A482S083_9ARCH (Nucleotid_trans domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S083_9ARCH)

HSP 1 Score: 82.8 bits (203), Expect = 1.960e-14
Identity = 46/174 (26.44%), Postives = 90/174 (51.72%), Query Frame = 3
Query:   15 PAVVMQVVSKDYIKLQRNFIRLMEK--NSDFTRENLYLMCLDDESYRAIHGGMGIRCVP----------LTSLLRNNNRKQIFTLRVQVVSCLVKAGHDVILSDADALWLADPMKDFSLPTIRESSIVAARGGFPHDLAHQWGSTMCMGFIFFRAEGKRIGEYVAVMNELVLKN 500
            P  V+ ++   Y ++ +N++   +     + + +NL ++C+D      +H    +RC P            S   ++ +  ++  R+++++  +    DV++SD DA WL  P  D +L +  +S IVA+RG FP  ++ QWGST+CMGF++ +A       +  V+ ++ L N
Sbjct:   62 PHRVLLLLDSKYFEVFQNWLMYYKGVCPGEASDKNLEIVCMDIAVTDMLHNHTALRCSPHYTAPSPASISVSNAASSFKSSVWIKRLEIINMFLMQQQDVLVSDTDAFWLRSPYTDLTLLS-EQSDIVASRGWFPIHISEQWGSTLCMGFLYIKASDFTRDVFNRVLGDMHLTN 234          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig105.784.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
A0A6H5LI82_9PHAE8.280e-10258.71Nucleotid_trans domain-containing protein n=2 Tax=... [more]
D8LK17_ECTSI1.120e-8151.01Nucleotid_trans domain-containing protein n=1 Tax=... [more]
A0A6H5KMQ8_9PHAE4.760e-7949.43Nucleotid_trans domain-containing protein n=2 Tax=... [more]
D8LSV3_ECTSI7.650e-7748.67Nucleotid_trans domain-containing protein n=2 Tax=... [more]
D7FGV6_ECTSI9.510e-7748.67Acetyltransferase (Isoleucine patch superfamily pr... [more]
D7G4E2_ECTSI5.910e-6757.78Nucleotid_trans domain-containing protein n=2 Tax=... [more]
A0A6H5JTX9_9PHAE3.440e-6440.52Nucleotid_trans domain-containing protein n=1 Tax=... [more]
D7FQM0_ECTSI7.220e-5157.72Nucleotid_trans domain-containing protein n=1 Tax=... [more]
A0A7S0SXH7_9STRA3.790e-2028.43Hypothetical protein (Fragment) n=2 Tax=Chromulina... [more]
A0A482S083_9ARCH1.960e-1426.44Nucleotid_trans domain-containing protein n=1 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig105contigEcto-sp8_S_contig105:16288..17720 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score292.0
Seed ortholog evalue2.8e-76
Seed eggNOG ortholog2880.D8LSV4
Model size883
Hectar predicted targeting categoryother localisation
Exons2
EggNOG free text desc.Nucleotide-diphospho-sugar transferase
EggNOG OGs2C6NG@1,2SGR5@2759
Cds size777
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681143148.1374042-UTR-Ecto-sp8_S_contig105:16287..163131681143148.1374042-UTR-Ecto-sp8_S_contig105:16287..16313Ectocarpus species8 EcLAC_412UTREcto-sp8_S_contig105 16288..16313 +
1681143148.161365-UTR-Ecto-sp8_S_contig105:17640..177201681143148.161365-UTR-Ecto-sp8_S_contig105:17640..17720Ectocarpus species8 EcLAC_412UTREcto-sp8_S_contig105 17641..17720 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681143148.1461542-CDS-Ecto-sp8_S_contig105:16313..165441681143148.1461542-CDS-Ecto-sp8_S_contig105:16313..16544Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig105 16314..16544 +
1681143148.15355-CDS-Ecto-sp8_S_contig105:17094..176401681143148.15355-CDS-Ecto-sp8_S_contig105:17094..17640Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig105 17095..17640 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig105.784.1prot_Ecto-sp8_S_contig105.784.1Ectocarpus species8 EcLAC_412polypeptideEcto-sp8_S_contig105 16314..17640 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp8_S_contig105.784.1

>prot_Ecto-sp8_S_contig105.784.1 ID=prot_Ecto-sp8_S_contig105.784.1|Name=mRNA_Ecto-sp8_S_contig105.784.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=259bp
MQVVSKDYIKLQRNFIRLMEKNSDFTRENLYLMCLDDESYRAIHGGMGIR
CVPLTSLLRNNNRKQIFTLRVQVVSCLVKAGHDVILSDADALWLADPMKD
FSLPTIRESSIVAARGGFPHDLAHQWGSTMCMGFIFFRAEGKRIGEYVAV
MNELVLKNANDQVSVNKAAKSLGIVWDKGGSDMRYEKSVTFGGGTIDSLV
DDESRPFRVTLLPHSTYPRICEETPISENTRVAHCLWVGKGEVMSTWMKH
ANLWSNNA*
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mRNA from alignment at Ecto-sp8_S_contig105:16288..17720+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp8_S_contig105.784.1 ID=mRNA_Ecto-sp8_S_contig105.784.1|Name=mRNA_Ecto-sp8_S_contig105.784.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=1433bp|location=Sequence derived from alignment at Ecto-sp8_S_contig105:16288..17720+ (Ectocarpus species8 EcLAC_412)
CTCCTCGGTCAGATCCGGCGGTGGTAATGCAAGTTGTGTCCAAGGACTAC ATTAAGCTACAGCGAAATTTCATTCGGCTCATGGAGAAGAACTCGGACTT CACCCGGGAAAATTTGTACCTCATGTGCCTGGACGATGAGTCATATCGAG CCATTCACGGGGGAATGGGAATCCGATGCGTCCCGCTCACATCGTTACTT CGAAACAACAACCGCAAACAGATCTTCACCCTGAGGGTACAGGTCGTATC GTGCCTGGTGAGTATTAGCATGAGTGTCTTAGGGAAGACAACGACGGGCA GGGCGCGGCAGTCACACATTTTCGGTATCAGACACGCAGCACGCGGGTGG AGTAGAGGCTTTGGCTTCAATGAGGCAAACAGGGACCCATGCGTATGTAG GTGGAGGGGAGTGTATGCTGATCAATGGAACTTATGAACTTGCGATATCT GCCTGCTTCATCGGTTGATGGCTAGTCGGGTGGAAACCGTATGCATTGAT CCTCGTCCGAACCCCCCTGGGCCAGACGTTTCACGTTTTATTTACGTGAG GCTATGATTTATTCACTACGGGCTCAGGCATTTTGAACAAACCCCATACG CCGTCACTGTGGAGTTTCCGCAATGTGACACACATCCCGTGAGTGTCAGA GCAGGAGATTGACGACCTTAACATGTGAAGGGGTTCTTGTGGTCAAGGAC GGCATGTCCTGTGACTTGCCCTACAGACGGCGAAACACGTATGGACGAGT AAAATACTGGTCGGCCTATGACAGCCGCCCCATCCCCTGCGTCTTTCTTC ACTCCAGGTCAAGGCTGGCCACGACGTCATCTTGTCTGATGCGGATGCAT TGTGGTTGGCGGATCCTATGAAGGATTTCTCCCTACCGACAATTCGTGAA AGCAGCATTGTCGCCGCGAGAGGGGGGTTTCCTCATGATTTAGCACACCA GTGGGGGTCGACAATGTGCATGGGGTTCATTTTCTTCCGGGCCGAGGGGA AACGTATAGGGGAGTATGTTGCGGTCATGAACGAGCTTGTGTTAAAAAAC GCCAACGACCAGGTGTCCGTAAACAAGGCTGCCAAGAGCCTAGGGATTGT GTGGGACAAAGGAGGAAGCGATATGCGTTACGAAAAAAGTGTCACGTTCG GCGGAGGAACCATTGATTCTCTTGTGGATGATGAGAGCCGGCCGTTTAGG GTCACTTTACTCCCTCACAGCACGTACCCGCGCATTTGTGAAGAGACTCC TATATCGGAAAATACCAGAGTAGCACACTGCCTTTGGGTCGGGAAGGGAG AAGTCATGTCAACTTGGATGAAGCATGCCAACTTGTGGTCCAACAATGCT TAGGGAGAGGTAATGATACGGAATAGAAAAGGAAAGACTCCTTTGTAGCA TCAACGTTCTCGCCGTGAACGAGTTGATGTGGG
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Coding sequence (CDS) from alignment at Ecto-sp8_S_contig105:16288..17720+

>mRNA_Ecto-sp8_S_contig105.784.1 ID=mRNA_Ecto-sp8_S_contig105.784.1|Name=mRNA_Ecto-sp8_S_contig105.784.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=777bp|location=Sequence derived from alignment at Ecto-sp8_S_contig105:16288..17720+ (Ectocarpus species8 EcLAC_412)
ATGCAAGTTGTGTCCAAGGACTACATTAAGCTACAGCGAAATTTCATTCG
GCTCATGGAGAAGAACTCGGACTTCACCCGGGAAAATTTGTACCTCATGT
GCCTGGACGATGAGTCATATCGAGCCATTCACGGGGGAATGGGAATCCGA
TGCGTCCCGCTCACATCGTTACTTCGAAACAACAACCGCAAACAGATCTT
CACCCTGAGGGTACAGGTCGTATCGTGCCTGGTCAAGGCTGGCCACGACG
TCATCTTGTCTGATGCGGATGCATTGTGGTTGGCGGATCCTATGAAGGAT
TTCTCCCTACCGACAATTCGTGAAAGCAGCATTGTCGCCGCGAGAGGGGG
GTTTCCTCATGATTTAGCACACCAGTGGGGGTCGACAATGTGCATGGGGT
TCATTTTCTTCCGGGCCGAGGGGAAACGTATAGGGGAGTATGTTGCGGTC
ATGAACGAGCTTGTGTTAAAAAACGCCAACGACCAGGTGTCCGTAAACAA
GGCTGCCAAGAGCCTAGGGATTGTGTGGGACAAAGGAGGAAGCGATATGC
GTTACGAAAAAAGTGTCACGTTCGGCGGAGGAACCATTGATTCTCTTGTG
GATGATGAGAGCCGGCCGTTTAGGGTCACTTTACTCCCTCACAGCACGTA
CCCGCGCATTTGTGAAGAGACTCCTATATCGGAAAATACCAGAGTAGCAC
ACTGCCTTTGGGTCGGGAAGGGAGAAGTCATGTCAACTTGGATGAAGCAT
GCCAACTTGTGGTCCAACAATGCTTAG
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