mRNA_Ecto-sp8_S_contig10491.774.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig10491.774.1 vs. uniprot
Match: D7FT56_ECTSI (tRNA-uridine aminocarboxypropyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FT56_ECTSI) HSP 1 Score: 712 bits (1838), Expect = 3.470e-253 Identity = 429/454 (94.49%), Postives = 432/454 (95.15%), Query Frame = 1
Query: 70 MILVRLMLALAAQVVAVAGQKSGASERLRARSSSASALRVLLPPPGSADRNSDALFCCPTTLTPFLAVGRRKPRRAACAAREIGNDAPSQAVQSYYERRREAMGAWTEERRGRDLCERCRRAREMCLCSSLPAEAMPTSTRFVILQHPAETKKRVTGTVPLVLHCLANCTRVVMRHDYSEQDLRKALGVEVAIDSSPERVSEISSERENSASTGTPLLLFPCPGADYLEDIAASRDQPAPSAQPFPPTPAXXXXXXXXXXXXXXXXXXXXXVVV--LVDGTWSQAKQILSRYPSLLRSRMAATPAGQKTRELGASVGGVPVAAXXXXXXXXXXXXXXXXXXXXXXXSGGREAGPMEDGALCRAVKFRCAGVSGYGFRREPAKECLSTLESVAYTLEVLEGTPQGLAAAAYLRKAFKAMVSMQLSRADTGGRRPRFVNRKERTTNRRSTPKKGIL 1425
MILVRLMLA AAQ VAVAGQKSGASERLRARSSSASALR+LLPPPGSA RNSDALFCCPTTLTPFL V RRKPRRAACAAREIGNDAPSQAVQSYYERRREAMGAWTEERRGRDLCERCRRAREMCLCSSLPAEAMPTSTRFVILQHPAETKKRVTGTVPLVLHCLANCTRVVMR+DYSEQDLRKALGVEVAI SPERVSEISSERENSASTG PLLLFPCPGA+YLEDIAASRDQPAPSAQPFP XXXXXXXXXXXXXXXXXXXXX LVDGTWSQAKQILSRYPSLLR A TPAGQKTRELGASVGGVPVAAXXXXXXXXXXXXXXXXXXXXXXXSGGREAGPMEDGALCRAVKFRCAGVSGYGFRREPAKECLSTLESVAYTLEVLEGTPQGLAAAAYLRKAFKAMVSMQLSRAD GGRRPRFVNRKERTTNRRSTPKKGIL
Sbjct: 1 MILVRLMLAFAAQAVAVAGQKSGASERLRARSSSASALRLLLPPPGSAGRNSDALFCCPTTLTPFLTVRRRKPRRAACAAREIGNDAPSQAVQSYYERRREAMGAWTEERRGRDLCERCRRAREMCLCSSLPAEAMPTSTRFVILQHPAETKKRVTGTVPLVLHCLANCTRVVMRYDYSEQDLRKALGVEVAIYRSPERVSEISSERENSASTGIPLLLFPCPGAEYLEDIAASRDQPAPSAQPFPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVDGTWSQAKQILSRYPSLLRPTTATTPAGQKTRELGASVGGVPVAAXXXXXXXXXXXXXXXXXXXXXXXSGGREAGPMEDGALCRAVKFRCAGVSGYGFRREPAKECLSTLESVAYTLEVLEGTPQGLAAAAYLRKAFKAMVSMQLSRADAGGRRPRFVNRKERTTNRRSTPKKGIL 454
BLAST of mRNA_Ecto-sp8_S_contig10491.774.1 vs. uniprot
Match: L1J958_GUITC (tRNA-uridine aminocarboxypropyltransferase n=2 Tax=Guillardia theta TaxID=55529 RepID=L1J958_GUITC) HSP 1 Score: 92.4 bits (228), Expect = 1.820e-16 Identity = 94/330 (28.48%), Postives = 136/330 (41.21%), Query Frame = 1
Query: 403 GRDLCERCRRAREMCLCSSLPAEAMPTSTRFVILQHPAETKKRVTGTVPLVLHCLANCTRVVMRHDYSEQ--DLRKALGVEVAIDSSPERVSEISSERENSA---STGTPLLLFPCPGADYLEDIAASRD-QPAPSAQPFP-------PTPAXXXXXXXXXXXXXXXXXXXXXVVVLVDGTWSQAKQILSRYPSLLRSRMAATPAGQKTRELGASVGGVPVAAXXXXXXXXXXXXXXXXXXXXXXXSGGREAGPMEDGALCRAVKFRCAGVSGYGFRREPAKECLSTLESVAYTLEVLEGTPQGLAAAAYLRKAFKAMVSMQLSRADTGG 1353
GR +C+RC R +C+CSSLPAE + T+ +++QHP E K++ GTVPL+ L N VV R + +++ R G +V D + SS +++S+ CP + I + D PA A P P +++VDGTW QA +++ R + R+ +E G + R V+F AG SGY FR+EP + CLSTLESVAY+L+ LE T +G A +L F MVS+Q S GG
Sbjct: 2 GRAVCQRCGRPETVCVCSSLPAEKIMLKTKILVVQHPCECHKKIIGTVPLMELVLDNMQVVVARGNGAKEASTTRGRRGRKVGSDEGSPLSYDSSSSQDDSSLLQKVNDASDTAACPIQNKKGIIHGTLDGNPALEAALSDKKTLLLYPGPGAVDIETLQLDDSDSER-----TLIVVDGTWRQAGRVI-REECIRRA--------------------------------------------------------VERGDVTR-VQFARAGRSGYKFRKEPHQFCLSTLESVAYSLQYLEKTSEGERAVCHLMDTFSQMVSLQTSYIAKGG 268
BLAST of mRNA_Ecto-sp8_S_contig10491.774.1 vs. uniprot
Match: A0A836CLP8_9STRA (tRNA-uridine aminocarboxypropyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLP8_9STRA) HSP 1 Score: 79.7 bits (195), Expect = 5.280e-14 Identity = 47/79 (59.49%), Postives = 51/79 (64.56%), Query Frame = 1
Query: 1141 LCRAVKFRCAGVSGYGFRREPAKECLSTLESVAYTLEVLEGTPQGLAAAAYLRKAFKAMVSMQLSRADTGGRRPRFVNR 1377
LC V+FR G S Y RREP CLSTLES+AY+LEVLE T Q AAA LRKAF AMV Q+ AD G RFV R
Sbjct: 34 LCTPVQFRDGGSSTYTIRREPMPHCLSTLESIAYSLEVLEATDQARAAAVSLRKAFAAMVRHQVRSADEVGN-VRFVKR 111
BLAST of mRNA_Ecto-sp8_S_contig10491.774.1 vs. uniprot
Match: R1BXS1_EMIHU (tRNA-uridine aminocarboxypropyltransferase n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1BXS1_EMIHU) HSP 1 Score: 85.9 bits (211), Expect = 7.850e-14 Identity = 94/331 (28.40%), Postives = 127/331 (38.37%), Query Frame = 1
Query: 406 RDLCERCRR-AREMCLCSSLPAEAMPTSTRFVILQHPAETKKRVTGTVPLVLHCLANCTRVVMRHDYSEQDLRKALGVEVAIDSSPERVSEISSERENSASTGTPLLLFPCPGADYLEDIAASRDQPAPSAQPFPPTPAXXXXXXXXXXXXXXXXXXXXXVVVLVDGTWSQAKQILSRYPSLLRSRMAATPAGQKTRELGASVGGVPVAAXXXXXXXXXXXXXXXXXXXXXXXSGGREAGPMEDGALCRAVKF-RCAGVSGYGFRREPAKECLSTLESVAYTLEVLEGTPQGLAAAAYLRKAFKAMVSMQLSRADTGGRRPRFVNRKERTT 1392
R +C RCRR AR+ C+C+ LP + TR +ILQHP E++K + VPL+ CL V + A G+E S E PLLLFP GA L D AA QP S++ T ++VL+DGTWSQA+ ++ PSL A C V F R A RREP + C+STLE+ A L ++E T AAA + + +A+V QL+ A+ RRPR+ R E+ T
Sbjct: 28 RSVCRRCRRPARQHCVCAELPPAPIAVQTRVLILQHPRESRKAMCS-VPLIPLCLREAEVVQAPMPFEAGSCFTAEGLEPLQRSIREGYE--------------PLLLFPGEGAVPL-DAAAGWPQPRASSKQSSAT--------------RRSRERRRKLLVLIDGTWSQARAMMRHSPSLA--------------------------------------------------------------AACTLVMFERPAQPIIAAVRREPERHCVSTLEACARALRLVEPTSAAEEAAAAMERGLRALVGRQLAAAEAD-RRPRYWRRAEQPT 265
BLAST of mRNA_Ecto-sp8_S_contig10491.774.1 vs. uniprot
Match: A0A6P7V939_IXOSC (tRNA-uridine aminocarboxypropyltransferase n=3 Tax=Ixodes TaxID=6944 RepID=A0A6P7V939_IXOSC) HSP 1 Score: 81.6 bits (200), Expect = 1.560e-13 Identity = 75/289 (25.95%), Postives = 104/289 (35.99%), Query Frame = 1
Query: 406 RDLCERCRRAREMCLCSSLPAEAMPTSTRFVILQHPAETKKRVTGTVPLVLHCLANCTRVVMRHDYSEQDLRKALGVEVAIDSSPERVSEISSERENSASTGTPLLLFPCPGADYLEDIAASRDQPAPSAQPFPPTPAXXXXXXXXXXXXXXXXXXXXXVVVLVDGTWSQAKQILSRYPSLLRSRMAATPAGQKTRELGASVGGVPVAAXXXXXXXXXXXXXXXXXXXXXXXSGGREAGPMEDGALCRAVKFRCAGVSGYGFRREPAKECLSTLESVAYTLEVLEGTPQ 1272
R LC +CRR +C CSSLP +P S++ ILQHP E K+ + T P++ L + VV+R ++ AL + D P S G L+L+P P A+ LED+ R++ +VL+DGTWSQA+ + P L R R V+ S Y R +P +ECLST+E+VAY L VLE PQ
Sbjct: 24 RALCNKCRRPPAVCWCSSLPETPVPVSSKVFILQHPGEVKRNLR-TAPMLEAALDSEHCVVLRGRRFSRERHGALNAMLDGDEGP--------------SLGDTLVLYPGPNAEPLEDLPTVRER------------------------------GRGYNLVLLDGTWSQARSLFHNSPHLHRLRQ---------------------------------------------------------------VQINPNRTSSYVIRTQPTRECLSTVETVAYALSVLEENPQ 204
BLAST of mRNA_Ecto-sp8_S_contig10491.774.1 vs. uniprot
Match: A0A7S3RJQ7_EMIHU (tRNA-uridine aminocarboxypropyltransferase (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3RJQ7_EMIHU) HSP 1 Score: 77.0 bits (188), Expect = 6.300e-12 Identity = 86/312 (27.56%), Postives = 116/312 (37.18%), Query Frame = 1
Query: 406 RDLCERCRR-AREMCLCSSLPAEAMPTSTRFVILQHPAETKKRVTGTVPLVLHCLANCTRVVMRHDYSEQDLRKALGVEVAIDSSPERVSEISSERENSASTGTPLLLFPCPGADYLEDIAASRDQPAPSAQPFPPTPAXXXXXXXXXXXXXXXXXXXXXVVVLVDGTWSQAKQILSRYPSLLRSRMAATPAGQKTRELGASVGGVPVAAXXXXXXXXXXXXXXXXXXXXXXXSGGREAGPMEDGALCRAVKF-RCAGVSGYGFRREPAKECLSTLESVAYTLEVLEGTPQGLAAAAYLRKAFKAMVSMQLS 1335
R +C RCRR AR+ C+C+ LP + TR +ILQHP E++K + VPL+ CL V + A G+E S E PLLLFP GA L D AA QP S++ T ++VL+DGTWSQA+ ++ PSL A C V F R A RREP + C+STLE+ A L ++E T AAA + + +A+V QL+
Sbjct: 50 RSVCRRCRRPARQHCVCAELPPAPIAVQTRVLILQHPRESRKAMCS-VPLIPLCLREAEVVQAPMPFEAGSCFTAEGLEPLQRSIREGYE--------------PLLLFPGEGAVPL-DAAAGWPQPRASSKQSSAT--------------RRSRERRRKLLVLIDGTWSQARAMMRHSPSLA--------------------------------------------------------------AACTLVMFERPAQPIIAAVRREPERHCVSTLEACARALRLVEPTSAAEEAAAAMERGLRALVGRQLA 269
BLAST of mRNA_Ecto-sp8_S_contig10491.774.1 vs. uniprot
Match: A0A6P7VBB6_IXOSC (tRNA-uridine aminocarboxypropyltransferase n=2 Tax=Ixodes scapularis TaxID=6945 RepID=A0A6P7VBB6_IXOSC) HSP 1 Score: 71.6 bits (174), Expect = 3.960e-10 Identity = 71/282 (25.18%), Postives = 99/282 (35.11%), Query Frame = 1
Query: 427 RRAREMCLCSSLPAEAMPTSTRFVILQHPAETKKRVTGTVPLVLHCLANCTRVVMRHDYSEQDLRKALGVEVAIDSSPERVSEISSERENSASTGTPLLLFPCPGADYLEDIAASRDQPAPSAQPFPPTPAXXXXXXXXXXXXXXXXXXXXXVVVLVDGTWSQAKQILSRYPSLLRSRMAATPAGQKTRELGASVGGVPVAAXXXXXXXXXXXXXXXXXXXXXXXSGGREAGPMEDGALCRAVKFRCAGVSGYGFRREPAKECLSTLESVAYTLEVLEGTPQ 1272
RR +C CSSLP +P S++ ILQHP E K+ + T P++ L + VV+R ++ AL + D P S G L+L+P P A+ LED+ R++ +VL+DGTWSQA+ + P L R R V+ S Y R +P +ECLST+E+VAY L VLE PQ
Sbjct: 34 RRPPAVCWCSSLPETPVPVSSKVFILQHPGEVKRNLR-TAPMLEAALDSEHCVVLRGRRFSRERHGALNAMLDGDEGP--------------SLGDTLVLYPGPNAEPLEDLPTVRER------------------------------GRGYNLVLLDGTWSQARSLFHNSPHLHRLRQ---------------------------------------------------------------VQINPNRTSSYVIRTQPTRECLSTVETVAYALSVLEENPQ 207
BLAST of mRNA_Ecto-sp8_S_contig10491.774.1 vs. uniprot
Match: A0A5N6NCR0_9ASTR (tRNA-uridine aminocarboxypropyltransferase n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6NCR0_9ASTR) HSP 1 Score: 68.6 bits (166), Expect = 1.420e-9 Identity = 55/176 (31.25%), Postives = 78/176 (44.32%), Query Frame = 1
Query: 406 RDLCERCRRAREMCLCSSLPAEAMPTSTRFVILQHPAETKKRVTGTVPLVLHCLANCTRVVMRHDYSEQDLRKALGVEVAIDSSPERVSEISSERENSASTGTPLLLFPCPGADYLEDIAASRDQPAPSAQPFPPTPAXXXXXXXXXXXXXXXXXXXXXVVVLVDGTWSQAKQILS 933
R +C C R +CLC SLPAE + T+T+ VILQHP E + R+ TVP++ CL NC ++ R R LG +DS + S+ + R A+ LFP G D PAPS + V+++ DGTW AK+++S
Sbjct: 18 RRICNACERPATVCLCDSLPAEPLSTTTQIVILQHPHEQRHRL-ATVPVLNKCLRNCQTLIGR--------RLRLGDSALLDSLHDAASDQNPPRSIQAA-----FLFP--GTD-----------PAPSME------------INRWLSSFGDTNMNKFVLIVFDGTWKHAKEMVS 154
BLAST of mRNA_Ecto-sp8_S_contig10491.774.1 vs. uniprot
Match: A0A6J0SH94_9SAUR (tRNA-uridine aminocarboxypropyltransferase n=1 Tax=Pogona vitticeps TaxID=103695 RepID=A0A6J0SH94_9SAUR) HSP 1 Score: 70.1 bits (170), Expect = 1.700e-9 Identity = 56/178 (31.46%), Postives = 79/178 (44.38%), Query Frame = 1
Query: 406 RDLCERCRRAREMCLCSSLPAEAMPTSTRFVILQHPAETKKRVTGTVPLVLHCLA-NCTRVVMRHDYSEQDLRKALGVEVAIDSSPERVSEISSERENSASTGTPLLLFPCPGADYLEDIAASRDQPAPSAQPFPPTPAXXXXXXXXXXXXXXXXXXXXXVVVLVDGTWSQAKQILSR 936
R C RC R +++CLC LP + ST I+QHPAE + RV TVPL+ CL + +V++ +SE E E++S NS + L+L+P GA LED+ S +P V++++DGTWSQAK I SR
Sbjct: 56 RPECGRCGRPQKVCLCPFLPVHPLNVSTCLYIIQHPAE-ENRVLRTVPLLAACLPEDKCKVLIGRRFSE-----------------EGYPELASVCRNSNT----LILYPGAGATNLEDVDLSTIEP--------------------------------YVIIIIDGTWSQAKDIFSR 179
BLAST of mRNA_Ecto-sp8_S_contig10491.774.1 vs. uniprot
Match: UPI001955E9FB (tRNA-uridine aminocarboxypropyltransferase 2 n=1 Tax=Pimephales promelas TaxID=90988 RepID=UPI001955E9FB) HSP 1 Score: 67.8 bits (164), Expect = 9.440e-9 Identity = 58/183 (31.69%), Postives = 80/183 (43.72%), Query Frame = 1
Query: 406 RDLCERCRRAREMCLCSSLPAEAMPTSTRFVILQHPAETKKRVTGTVPLVLHCLA--NCTRVVMRHDYSEQDLRKALGVEVAIDSSPERVSEISSERENSASTGTPLLLFPCPGADYLEDIAASRDQPAPSAQPFPPTPAXXXXXXXXXXXXXXXXXXXXXVVVLVDGTWSQAKQILSRYPSL 948
R C RC R ++CLC LPA + ST I+QHPAE + RV TVPL+ CLA C RV + +SE +R ++++ +S+S LLL+P A+ LED++ S V+L+DGTWSQAK + R P L
Sbjct: 53 RPTCRRCCRPVKVCLCPYLPALPLDVSTSLYIVQHPAE-ESRVLRTVPLLAACLAPGKC-RVFVGRRFSE-----------------DRYPDLAAVCRDSSS----LLLYPGAAAESLEDLSFSS---------------------------------ATHSVILIDGTWSQAKDMFLRNPLL 179 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig10491.774.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig10491.774.1 >prot_Ecto-sp8_S_contig10491.774.1 ID=prot_Ecto-sp8_S_contig10491.774.1|Name=mRNA_Ecto-sp8_S_contig10491.774.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=453bp MILVRLMLALAAQVVAVAGQKSGASERLRARSSSASALRVLLPPPGSADRback to top mRNA from alignment at Ecto-sp8_S_contig10491:687..5055+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig10491.774.1 ID=mRNA_Ecto-sp8_S_contig10491.774.1|Name=mRNA_Ecto-sp8_S_contig10491.774.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=4369bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10491:687..5055+ (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig10491:687..5055+ >mRNA_Ecto-sp8_S_contig10491.774.1 ID=mRNA_Ecto-sp8_S_contig10491.774.1|Name=mRNA_Ecto-sp8_S_contig10491.774.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=1359bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10491:687..5055+ (Ectocarpus species8 EcLAC_412)back to top |