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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Model size | 759 |
| Hectar predicted targeting category | other localisation |
| Exons | 4 |
| Ec32 ortholog description | Hypothetical protein |
| Ec32 ortholog | Ec-27_005520.1 |
| Cds size | 759 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1681143147.3846147-CDS-Ecto-sp8_S_contig1049:11025..11224 | 1681143147.3846147-CDS-Ecto-sp8_S_contig1049:11025..11224 | Ectocarpus species8 EcLAC_412 | CDS | Ecto-sp8_S_contig1049 11026..11224 + |
| 1681143147.3923461-CDS-Ecto-sp8_S_contig1049:12094..12305 | 1681143147.3923461-CDS-Ecto-sp8_S_contig1049:12094..12305 | Ectocarpus species8 EcLAC_412 | CDS | Ecto-sp8_S_contig1049 12095..12305 + |
| 1681143147.401282-CDS-Ecto-sp8_S_contig1049:12544..12706 | 1681143147.401282-CDS-Ecto-sp8_S_contig1049:12544..12706 | Ectocarpus species8 EcLAC_412 | CDS | Ecto-sp8_S_contig1049 12545..12706 + |
| 1681143147.4090433-CDS-Ecto-sp8_S_contig1049:13135..13322 | 1681143147.4090433-CDS-Ecto-sp8_S_contig1049:13135..13322 | Ectocarpus species8 EcLAC_412 | CDS | Ecto-sp8_S_contig1049 13136..13322 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig1049.771.1 >prot_Ecto-sp8_S_contig1049.771.1 ID=prot_Ecto-sp8_S_contig1049.771.1|Name=mRNA_Ecto-sp8_S_contig1049.771.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=253bp
MNLNTGVEPWSNSPPRSSCAKNKSVLLKARWRTGTGPPPSQGWDEVHGDS
SLPRTCDGWESGHFSSAFAAASRGTTAERRRTDGRWRGKESNHPNRTEPR
ANSQRGKRSSHPGLAIGPLQVSSVALRPFAHGELYRRPPQRLAGRKPLMA
PGVALSSSLAPIEPHGFDPRLLDKEALCIGSGISRGASLTSQAAALRQKQ
LQFRHRVFQSTHKSAGLVRLISVMREDASSVATTGGGRDSGSRCSSRHRQ
RQ* back to topmRNA from alignment at Ecto-sp8_S_contig1049:11026..13322+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_Ecto-sp8_S_contig1049.771.1 ID=mRNA_Ecto-sp8_S_contig1049.771.1|Name=mRNA_Ecto-sp8_S_contig1049.771.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=2297bp|location=Sequence derived from alignment at Ecto-sp8_S_contig1049:11026..13322+ (Ectocarpus species8 EcLAC_412)
ATGAACCTGAACACTGGGGTTGAGCCATGGTCAAACTCCCCACCCCGTTC
CTCGTGCGCCAAGAATAAATCGGTGTTGCTGAAGGCTCGATGGCGTACGG
GTACCGGACCGCCCCCTAGCCAAGGCTGGGATGAGGTACATGGCGACAGC
AGCTTACCTCGGACCTGCGATGGTTGGGAAAGTGGTCATTTCTCCTCAGG
TACGGTTCTTACAGCACTGTGCTGTGGGAAGGGGATACTCTCTGTGCTTC
TCTCCGGTGTACCACTTCGACTCGACGCTCATCTCCAGATTCGTCCTTCT
CCGTCAATGCCATCTATTTCTTCTGCCGTTGTTGCAGTTATACAGATAGC
GCCCGTCAAAATCGGGTGGAGCCTCAATCCCTTATTTTGGATCGAAGTAC
CGGCCCAAGTCATCCATTTTCTGAAGAGGCATTTCTTATTGCTTTGGACT
GCTGTCGCATCCTCCCGATTCTCTTGTTCCTCACAAGTACTTCGTATTTT
CTTATTTCTGTCTTTGATTTTGATCTCTGAGGACAATGAATCCACTTCAT
CAAGCCCTCAAGAGAGGTGGTGGAAAGTGCCATCAAACCCGTACAACAGC
GGAGAGCATGTGTTTGTCCGCGATGTGTGGCAGTACTACAGTACAGCACA
GTGAACAGCAGTGGCGGGGGGGGGGGGGCGCGAAAATAACCACTCTGCCC
CCCCAAGCTTGTGCCCCCTACAAGAAATAGTGCACTTCTGTTCAGCTAGG
ATGGGGGATTGGGAGCACCGACGATTTCTGATGTCATGGGCGTATCGCAC
CATCATGTTTCTTATTGGGGCGTTTCTTACGTTGTGGCCGAGATTGAGCT
ATGTTTCTTCGCCGTTTTTTCTTATTTTTCGTAAAAACTTGAGCCGTTTT
TTCTTCGCAGAATTTTCTTAACTCTTAACTGCGGACGCTATCTGTACTGA
TCTGTGTTTACGCACGTCGTTGCCCAAAATAATATGCATGCATATGTACG
CAGAGTACCTGCCTCACCATCTGATTTGTGCCGTATGGAAATATGTCCCA
CTCCTAAACCTCGGAACAGCATTTGCTGCTGCTTCTCGAGGCACGACGGC
AGAACGAAGAAGAACGGACGGTCGCTGGCGAGGCAAGGAAAGCAACCACC
CCAACAGAACTGAACCACGGGCCAATAGCCAGCGGGGTAAACGATCGTCC
CACCCAGGCCTTGCGATCGGCCCTCTGCAAGTATCATCGGTGGCCTTGCG
GCCATTCGCTCACGGAGAGTTATATAGAAGGTGGGCAGCCCTTTGTGCTT
CCACCCTGTCCAAACAAACCATAATAATAAACGTTGATACAATGCTACTG
CTGTACGTACAATATGGACTAATGACCGAACCTACCTACGCATCGGGCGG
GACTGGTGCGTGCATGATCCTAGCTAAAGCCTGCGAAACCCTGCAAAACA
ATCATGTAGTCACCCCTTCTCAGCCCTCAAAATGTGTTCGTCCAACTTTG
GTGGGTTGGTGATAAACAGGCCACCCCAACGATTAGCCGGCCGGAAGCCG
TTGATGGCCCCGGGAGTCGCGCTTTCTTCCTCACTGGCTCCGATCGAACC
ACATGGCTTCGACCCCCGACTCCTCGACAAAGAGGCTCTTTGCATAGGTA
GCGGGATATCTCGGGGAGCTTCACTTACCAGGTATGGGCAGGATAGCGAG
CACGAAGCGTTGTTTGGCTCCCCGTTCTTCGAGAGTTTATCAACATTTGT
TATTCTGTAGTCGCTCTCACACTTGTTGACTTACGCTCGAGTTGGCAACG
ACGTACTGAAGGTCGTGAGAATGGGAATGCGTGTGGCAGAATCGATCGAA
ACATGCAAAAGCGTTTCCCTGCCAAGTCACGAATGAGAGTATTATTTTTG
TTCTGCTTCCAGACAACCAGCGCCATAATCTACCCAAGCAGTCGTTGGTT
GTTGCAGTGATCAGACTCCGGTCTTCCGCGCACGTGCCATTGCGCCGGAC
GTGTATTGCAGGCACACACACAAAGAAAGCGCTTCCCCGAGCACACTATT
TTACACATCCAAACAAGGTAATGTTGTCCTGTTGCTCCTTCTGTATGGAA
CATCTCTCAGCCAAGCCGCGGCCTTGAGGCAGAAGCAGCTGCAGTTTCGA
CATCGGGTATTCCAGAGCACTCACAAGTCGGCGGGCTTGGTGCGGTTGAT
ATCTGTCATGAGGGAGGACGCGTCCTCCGTGGCTACCACTGGCGGGGGAA
GAGATTCGGGATCACGTTGTAGTAGTCGCCACAGGCAGCGGCAATAG back to topCoding sequence (CDS) from alignment at Ecto-sp8_S_contig1049:11026..13322+ >mRNA_Ecto-sp8_S_contig1049.771.1 ID=mRNA_Ecto-sp8_S_contig1049.771.1|Name=mRNA_Ecto-sp8_S_contig1049.771.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=759bp|location=Sequence derived from alignment at Ecto-sp8_S_contig1049:11026..13322+ (Ectocarpus species8 EcLAC_412)
ATGAACCTGAACACTGGGGTTGAGCCATGGTCAAACTCCCCACCCCGTTC
CTCGTGCGCCAAGAATAAATCGGTGTTGCTGAAGGCTCGATGGCGTACGG
GTACCGGACCGCCCCCTAGCCAAGGCTGGGATGAGGTACATGGCGACAGC
AGCTTACCTCGGACCTGCGATGGTTGGGAAAGTGGTCATTTCTCCTCAGC
ATTTGCTGCTGCTTCTCGAGGCACGACGGCAGAACGAAGAAGAACGGACG
GTCGCTGGCGAGGCAAGGAAAGCAACCACCCCAACAGAACTGAACCACGG
GCCAATAGCCAGCGGGGTAAACGATCGTCCCACCCAGGCCTTGCGATCGG
CCCTCTGCAAGTATCATCGGTGGCCTTGCGGCCATTCGCTCACGGAGAGT
TATATAGAAGGCCACCCCAACGATTAGCCGGCCGGAAGCCGTTGATGGCC
CCGGGAGTCGCGCTTTCTTCCTCACTGGCTCCGATCGAACCACATGGCTT
CGACCCCCGACTCCTCGACAAAGAGGCTCTTTGCATAGGTAGCGGGATAT
CTCGGGGAGCTTCACTTACCAGCCAAGCCGCGGCCTTGAGGCAGAAGCAG
CTGCAGTTTCGACATCGGGTATTCCAGAGCACTCACAAGTCGGCGGGCTT
GGTGCGGTTGATATCTGTCATGAGGGAGGACGCGTCCTCCGTGGCTACCA
CTGGCGGGGGAAGAGATTCGGGATCACGTTGTAGTAGTCGCCACAGGCAG
CGGCAATAG back to top
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