mRNA_Ecto-sp8_S_contig104825.763.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig104825.763.1 vs. uniprot
Match: D7FN88_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FN88_ECTSI) HSP 1 Score: 110 bits (276), Expect = 5.930e-27 Identity = 58/59 (98.31%), Postives = 58/59 (98.31%), Query Frame = 1
Query: 1 ASVFRVLRLFRILQLEHFVSAFSLLDDVWTASKDTLAATGLLALVVWVGSACLFYLFEK 177
ASVFRVLRLFRILQLEHFVSAFSLLDDVWTASKDTLAATGLLALVVWVGSA LFYLFEK
Sbjct: 1050 ASVFRVLRLFRILQLEHFVSAFSLLDDVWTASKDTLAATGLLALVVWVGSAFLFYLFEK 1108
BLAST of mRNA_Ecto-sp8_S_contig104825.763.1 vs. uniprot
Match: A0A7S1GZ91_9STRA (Hypothetical protein n=1 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A7S1GZ91_9STRA) HSP 1 Score: 73.6 bits (179), Expect = 4.290e-15 Identity = 35/59 (59.32%), Postives = 46/59 (77.97%), Query Frame = 1
Query: 1 ASVFRVLRLFRILQLEHFVSAFSLLDDVWTASKDTLAATGLLALVVWVGSACLFYLFEK 177
A +FR+ R+LQLE F++AFS LD+V+ ASKD + ATGLLAL++WVG LFYLFE+
Sbjct: 31 AMIFRIFXXXRMLQLEDFITAFSKLDNVFRASKDVMKATGLLALIIWVGCGALFYLFEE 89
BLAST of mRNA_Ecto-sp8_S_contig104825.763.1 vs. uniprot
Match: R1ESQ2_EMIHU (Ion_trans domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1ESQ2_EMIHU) HSP 1 Score: 73.6 bits (179), Expect = 5.010e-15 Identity = 35/59 (59.32%), Postives = 47/59 (79.66%), Query Frame = 1
Query: 1 ASVFRVLRLFRILQLEHFVSAFSLLDDVWTASKDTLAATGLLALVVWVGSACLFYLFEK 177
A+VFR+ R +LQLE F++AF+LLD+V AS D L ATGL+AL++WVG A LF+LFE+
Sbjct: 87 AAVFRIFRXXXVLQLERFLTAFTLLDNVLRASADVLVATGLMALIIWVGGAALFFLFEQ 145
BLAST of mRNA_Ecto-sp8_S_contig104825.763.1 vs. uniprot
Match: A0A836CDK7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDK7_9STRA) HSP 1 Score: 76.6 bits (187), Expect = 6.510e-15 Identity = 38/59 (64.41%), Postives = 46/59 (77.97%), Query Frame = 1
Query: 1 ASVFRVLRLFRILQLEHFVSAFSLLDDVWTASKDTLAATGLLALVVWVGSACLFYLFEK 177
A FR+LRLFR+LQLE V+AF+LLDDVW +K L A GLLA +VWVGSA LF+L E+
Sbjct: 1058 AGPFRILRLFRLLQLERHVNAFTLLDDVWRGAKGVLKAAGLLAFIVWVGSATLFFLTEQ 1116
BLAST of mRNA_Ecto-sp8_S_contig104825.763.1 vs. uniprot
Match: A0A7S1GK10_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GK10_CYCTE) HSP 1 Score: 75.9 bits (185), Expect = 1.210e-14 Identity = 38/59 (64.41%), Postives = 47/59 (79.66%), Query Frame = 1
Query: 1 ASVFRVLRLFRILQLEHFVSAFSLLDDVWTASKDTLAATGLLALVVWVGSACLFYLFEK 177
A +FRV R+FR+LQLE F+ AFS LD+V+ AS D L ATGLLALV+WVG LFY+FE+
Sbjct: 536 AMMFRVFRIFRLLQLEGFIVAFSKLDNVFRASMDVLKATGLLALVIWVGCGSLFYIFEQ 594
BLAST of mRNA_Ecto-sp8_S_contig104825.763.1 vs. uniprot
Match: A0A7S0XQ15_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0XQ15_HEMAN) HSP 1 Score: 73.2 bits (178), Expect = 1.800e-14 Identity = 35/58 (60.34%), Postives = 45/58 (77.59%), Query Frame = 1
Query: 4 SVFRVLRLFRILQLEHFVSAFSLLDDVWTASKDTLAATGLLALVVWVGSACLFYLFEK 177
+ RVLRLFRILQLEHF AF+L+DDV+ KDTL AT LA+++WVG+A F++ EK
Sbjct: 68 AAIRVLRLFRILQLEHFTEAFTLIDDVFRQCKDTLVATSFLAVIIWVGAAYAFFVTEK 125
BLAST of mRNA_Ecto-sp8_S_contig104825.763.1 vs. uniprot
Match: A0A7S2CE06_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2CE06_9EUKA) HSP 1 Score: 74.7 bits (182), Expect = 3.090e-14 Identity = 36/59 (61.02%), Postives = 48/59 (81.36%), Query Frame = 1
Query: 1 ASVFRVLRLFRILQLEHFVSAFSLLDDVWTASKDTLAATGLLALVVWVGSACLFYLFEK 177
A+VFR++RLFRILQLE AF+LLD+V+ AS L ATGL+AL+VW+ ACLF++FE+
Sbjct: 615 AAVFRIVRLFRILQLERLSPAFTLLDNVFRASAGVLKATGLVALIVWLAGACLFFIFER 673
BLAST of mRNA_Ecto-sp8_S_contig104825.763.1 vs. uniprot
Match: A0A7S0YVY9_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0YVY9_9CRYP) HSP 1 Score: 70.5 bits (171), Expect = 6.130e-14 Identity = 34/55 (61.82%), Postives = 43/55 (78.18%), Query Frame = 1
Query: 13 RVLRLFRILQLEHFVSAFSLLDDVWTASKDTLAATGLLALVVWVGSACLFYLFEK 177
RVLRL RILQLEHF AF+L+DDV+ KDTL AT LA+++WVG+A F+L E+
Sbjct: 13 RVLRLLRILQLEHFTEAFTLIDDVFRQCKDTLVATSFLAVIIWVGAAYAFFLTER 67
BLAST of mRNA_Ecto-sp8_S_contig104825.763.1 vs. uniprot
Match: A0A7S1DR60_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1DR60_HEMAN) HSP 1 Score: 73.2 bits (178), Expect = 1.060e-13 Identity = 35/58 (60.34%), Postives = 45/58 (77.59%), Query Frame = 1
Query: 4 SVFRVLRLFRILQLEHFVSAFSLLDDVWTASKDTLAATGLLALVVWVGSACLFYLFEK 177
+ RVLRLFRILQLEHF AF+L+DDV+ KDTL AT LA+++WVG+A F++ EK
Sbjct: 364 AAIRVLRLFRILQLEHFTEAFTLIDDVFRQCKDTLVATSFLAVIIWVGAAYAFFVTEK 421
BLAST of mRNA_Ecto-sp8_S_contig104825.763.1 vs. uniprot
Match: A0A7S4ESS3_CHRCT (Hypothetical protein (Fragment) n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4ESS3_CHRCT) HSP 1 Score: 72.8 bits (177), Expect = 1.380e-13 Identity = 35/59 (59.32%), Postives = 50/59 (84.75%), Query Frame = 1
Query: 1 ASVFRVLRLFRILQLEHFVSAFSLLDDVWTASKDTLAATGLLALVVWVGSACLFYLFEK 177
A+VFR++R+ RIL LE FV+AF++LD+V+ AS++ LAATGL+A ++WVGSA +LFEK
Sbjct: 305 ATVFRIVRVVRILSLERFVTAFTVLDNVFRASQEMLAATGLMAALIWVGSATCLFLFEK 363 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig104825.763.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig104825.763.1 >prot_Ecto-sp8_S_contig104825.763.1 ID=prot_Ecto-sp8_S_contig104825.763.1|Name=mRNA_Ecto-sp8_S_contig104825.763.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=59bp ASVFRVLRLFRILQLEHFVSAFSLLDDVWTASKDTLAATGLLALVVWVGSback to top mRNA from alignment at Ecto-sp8_S_contig104825:231..407- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig104825.763.1 ID=mRNA_Ecto-sp8_S_contig104825.763.1|Name=mRNA_Ecto-sp8_S_contig104825.763.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=177bp|location=Sequence derived from alignment at Ecto-sp8_S_contig104825:231..407- (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig104825:231..407- >mRNA_Ecto-sp8_S_contig104825.763.1 ID=mRNA_Ecto-sp8_S_contig104825.763.1|Name=mRNA_Ecto-sp8_S_contig104825.763.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=177bp|location=Sequence derived from alignment at Ecto-sp8_S_contig104825:231..407- (Ectocarpus species8 EcLAC_412)back to top |