mRNA_Ecto-sp8_S_contig10463.740.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig10463.740.1 vs. uniprot
Match: D7FVD7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVD7_ECTSI) HSP 1 Score: 942 bits (2436), Expect = 0.000e+0 Identity = 510/541 (94.27%), Postives = 518/541 (95.75%), Query Frame = 1
Query: 1 VSDEVEDENRSQRRDGGRPTAATVRPQVLVDDETGYTTSEEQGDRECSTSCGGESREDGSVPSPLVEAPSLAKIFPVSSSTQTPNTASTGEGGVDVGVQCCAPDSIDQXXXXVLPSPKLRVSCASQCERTRTSIXXXXXXXXXXXXXXXXRASQSCSRAVRQASSGVQCSLLVAAAEGEGGAVGEGPRGGLPSPNSPHAGVATVGIEDMMAPAFEVTYEEPRDSKEGLERALPQFPGSGKTARVVPAVVLSDSSTGGCGGDGVPAPRSKKRRKKAKAGCAAGRSAAAKSVMDRPSEPWSNAQGVQVGGWTRWLVSMAAFCGVVGLVLAAAGGVGRGAGDASWQGGDRLTSRVVHKGQTKGAQTPVWVVAGRSLTLGDVLASRDSAFMANDTGGVQWFRGGNVLPGQTSRPFLTVSEVSLEDEGTYACFAVEESGRIGSTPLWEEATVRISEPPLVESQLQTQRLARGEMLAIVATASGVPQPEYQWRRNGVPIPGATRPMLVKHGVSEADMGTYTCDVYNVAGRVQWEEMAVILREDRSKR 1623
VSDEVEDENRSQRRDGGRPTAAT RPQVLVDDETGYTTSEEQGDRECSTSCGGESREDGSVPSPLVEAPSLAK+FPVSSSTQT NTASTGEGGV+VG QCCAPDSIDQ VLPSPKLRVSCASQCERTRTSIXXXXXXXXXXXXXXXXRASQSCSRAVRQASSGVQCSLLVAAAEGEG AVG+GPRGG PSP+SPHAGVATVGIED+MAPAFE T+EEPRDSKE LERALPQ PGSGK ARVVPAV LSDSSTGGCGGDGVPAPRSKKRRKKAKAG AAGRSAAAKSVMDRPSEPWSNAQGV VGGWTRWLVSMAAFCGVVGLVLAAAGG GRGAGDASWQGGDRLT RVVH+GQTK AQ PVWVVAGRSLTLGDVL SRDSAFMANDTGGVQWFRGGNVLPGQT RPFLT+SEVSLEDEGTYACF VEESGRIGSTPLWEEATVRISEPPLVESQLQTQRLARGEMLAIVATASGVPQPEYQWRRNGVPIPGATRPMLVKHGVSEADMGTYTCDVYNVAGRVQWEEMAVILREDRSKR
Sbjct: 778 VSDEVEDENRSQRRDGGRPTAATARPQVLVDDETGYTTSEEQGDRECSTSCGGESREDGSVPSPLVEAPSLAKLFPVSSSTQTLNTASTGEGGVEVGAQCCAPDSIDQGVQCVLPSPKLRVSCASQCERTRTSIXXXXXXXXXXXXXXXXRASQSCSRAVRQASSGVQCSLLVAAAEGEGDAVGKGPRGGHPSPSSPHAGVATVGIEDIMAPAFEDTFEEPRDSKEDLERALPQSPGSGKMARVVPAVALSDSSTGGCGGDGVPAPRSKKRRKKAKAGFAAGRSAAAKSVMDRPSEPWSNAQGVLVGGWTRWLVSMAAFCGVVGLVLAAAGGAGRGAGDASWQGGDRLTPRVVHEGQTKRAQPPVWVVAGRSLTLGDVLTSRDSAFMANDTGGVQWFRGGNVLPGQT-RPFLTISEVSLEDEGTYACFTVEESGRIGSTPLWEEATVRISEPPLVESQLQTQRLARGEMLAIVATASGVPQPEYQWRRNGVPIPGATRPMLVKHGVSEADMGTYTCDVYNVAGRVQWEEMAVILREDRSKR 1317
BLAST of mRNA_Ecto-sp8_S_contig10463.740.1 vs. uniprot
Match: A0A7S2BBM4_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BBM4_9STRA) HSP 1 Score: 82.8 bits (203), Expect = 2.490e-15 Identity = 45/124 (36.29%), Postives = 64/124 (51.61%), Query Frame = 1
Query: 1234 LTVSEVSLEDEGTYACFAVEESGRIGSTPLWEEATVRISEPPLVESQLQTQRLARGEMLAIVATASGVPQPEYQWRRNGVPIPGATRPMLVKHGVSEADMGTYTCDVYNVAGRVQWEEMAVILR 1605
+ S + +EG A +++ W E VRI+E P+V + + G L + ATA GVPQ +QW NG+PI GA +L H + +A GTYTC V N+AG+ W E V +R
Sbjct: 8 VATSASQISEEGEGAPYSIR----------WGETIVRIAEAPVVNNYHGMNDVVEGASLVLTATARGVPQLNFQWVFNGMPIDGAKSKILELHDIQKAQAGTYTCFVENIAGKAVWMEAFVNVR 121
BLAST of mRNA_Ecto-sp8_S_contig10463.740.1 vs. uniprot
Match: A0A101GL67_9BACT (Uncharacterized protein (Fragment) n=3 Tax=Bacteroidetes TaxID=976 RepID=A0A101GL67_9BACT) HSP 1 Score: 79.7 bits (195), Expect = 9.160e-12 Identity = 46/140 (32.86%), Postives = 71/140 (50.71%), Query Frame = 1
Query: 1183 QWFRGGNVLPGQTSRPFLTVSEVSLEDEGTYACFAVEESGRIGSTPLWEEATVRISEPPLVESQLQTQRLARGEMLAIVATASGVPQPEYQWRRNGVPIPGATRPMLVKHGVSEADMGTYTCDVYNVAGRVQWEEMAVIL 1602
QW R G +LPG+T+ LT++ V+ D +Y C G S P A + I+ PP++ Q G + + +A+G YQW+ NG+ IPGA + L + + +D G Y+CDVYN G V ++ V +
Sbjct: 656 QWMRNGVILPGETNDS-LTINPVTYNDTASYTCLVSNTCGSELSIP----AKLTINIPPVITVQPHNISTCTGSSITLNISATG-DSLYYQWKFNGIDIPGAIQSSLTINPIQYSDTGYYSCDVYNTCGSVTSQQAHVTI 789
BLAST of mRNA_Ecto-sp8_S_contig10463.740.1 vs. uniprot
Match: UPI0009E36FC3 (neural cell adhesion molecule 2-like n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E36FC3) HSP 1 Score: 74.3 bits (181), Expect = 7.310e-11 Identity = 45/141 (31.91%), Postives = 69/141 (48.94%), Query Frame = 1
Query: 1180 VQWFRGGNVLPGQTSRPFLTVSEVSLEDEGTYACFAVEESGRIGSTPLWEEATVRISEPPLVESQLQTQRLARGEMLAIVATASGVPQPEYQWRRNGVPIPGATRPM-LVKHGVSEADMGTYTCDVYNVAGRVQWEEMAVI 1599
VQW R G + T + L S ++ D+G Y C A +G + + V P ++ SQ+Q+ G ++ I+ TASG P P+ QW RNG I T+ + L+ ++ D G YTC N AG + +E V+
Sbjct: 178 VQWLRNGKGITSGTKKVSLLFSSINRTDDGQYTCKATNSAGNDEN----QVTLVVYYAPRIIISQVQSS-YNEGSVVNIICTASGTPDPDVQWLRNGKGITSGTKKVSLLFSSINRTDDGQYTCKATNSAGNDENQETLVV 313
BLAST of mRNA_Ecto-sp8_S_contig10463.740.1 vs. uniprot
Match: A0A2V6F844_9BACT (Uncharacterized protein n=2 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=A0A2V6F844_9BACT) HSP 1 Score: 75.9 bits (185), Expect = 8.510e-11 Identity = 43/131 (32.82%), Postives = 62/131 (47.33%), Query Frame = 1
Query: 1183 QWFRGGNVLPGQTSRPFLTVSEVSLEDEGTYACFAVEESGRIGSTPLWEEATVRISEPPLVESQLQTQRLARGEMLAIVATASGVPQPEYQWRRNGVPIPGATRPMLVKHGVSEADMGTYTCDVYNVAGRV 1575
QW+ + + G + + T+S D G Y +G + S AT+ + PP++ +Q Q+ + G A A+G+P P YQW+ NGV IPGAT + V AD G YT N AG V
Sbjct: 412 QWYCNNSSIAGASGASY-TISAAQAGDAGDYKVRVSNSAGIVDSVV----ATLAVQSPPVITAQPQSLTVNVGASATFTAAATGIPDPAYQWKFNGVNIPGATSSSYTRDNVQPADAGNYTVVAVNSAGAV 537
BLAST of mRNA_Ecto-sp8_S_contig10463.740.1 vs. uniprot
Match: A0A832MI82_9BACT (Uncharacterized protein n=1 Tax=Verrucomicrobia subdivision 3 bacterium TaxID=2052186 RepID=A0A832MI82_9BACT) HSP 1 Score: 75.9 bits (185), Expect = 1.350e-10 Identity = 46/141 (32.62%), Postives = 66/141 (46.81%), Query Frame = 1
Query: 1183 QWFRGGNVLPGQTSRPFLTVSEVSLEDEGTYACFAVEESGRIGSTPLWEEATVRISEPPLVESQLQTQRLARGEMLAIVATASGVPQPEYQWRRNGVPIPGATRPMLVKHGVSEADMGTYTCDVYNVAGRVQWEEMAVILR 1605
QW R G + G ++P L ++ V D G Y+ +G + S A + + PP++ +Q Q+Q +A SGVP YQWR NGV +PGAT LV V A G Y +V N AG +++R
Sbjct: 912 QWLRDGVAIEG-ANQPTLGLTNVQTTDSGLYSVVLSNAAGVLTS----RVAALIVQTPPIIVTQPQSQTAVAFTTVAFGVDVSGVPPYHYQWRFNGVDLPGATNATLVLSNVQSAQAGNYQVEVSNTAGAATSAVATLVVR 1047
BLAST of mRNA_Ecto-sp8_S_contig10463.740.1 vs. uniprot
Match: H2V1L9_TAKRU (Uncharacterized protein n=7 Tax=Takifugu TaxID=31032 RepID=H2V1L9_TAKRU) HSP 1 Score: 75.5 bits (184), Expect = 1.370e-10 Identity = 52/152 (34.21%), Postives = 70/152 (46.05%), Query Frame = 1
Query: 1183 QWFRGGNVLPGQTSRPFLTVSEVSLEDEGTYACFAVEESGRIGSTPLWEEATVRISEPPLVES------------QLQTQRLARGEMLAIVATASGVPQPEYQWRRNGVPIPGATRPMLVKHGVSEADMGTYTCDVYNVAGRVQWEEMAVIL 1602
QWF+G + + TS P L +S VSL D G Y C G W + V + P +S Q + QRL GE L + A G P P YQW RNGVPIP AT+ LV + G Y C++ + R+ E+ V++
Sbjct: 139 QWFKGKDEVHNSTS-PDLMISPVSLRDTGFYICRV--NCGDAFEFSQWAQVDVLNTNMPCGQSYQSAGGRLKLVIQPKLQRLQVGENLQLECGAVGRPIPRYQWHRNGVPIPKATKRKLVIPHAMQEQHGRYRCEISSSTERLWTNEVDVVI 287
BLAST of mRNA_Ecto-sp8_S_contig10463.740.1 vs. uniprot
Match: UPI001C427311 (mucosa-associated lymphoid tissue lymphoma translocation protein 1 isoform X1 n=3 Tax=Solea senegalensis TaxID=28829 RepID=UPI001C427311) HSP 1 Score: 74.3 bits (181), Expect = 3.170e-10 Identity = 48/152 (31.58%), Postives = 71/152 (46.71%), Query Frame = 1
Query: 1183 QWFRGGNVLPGQTSRPFLTVSEVSLEDEGTYACFAVEESGRIGSTPLWEEATV------------RISEPPLVESQLQTQRLARGEMLAIVATASGVPQPEYQWRRNGVPIPGATRPMLVKHGVSEADMGTYTCDVYNVAGRVQWEEMAVIL 1602
QWF+G +P S P L +S V ++D G Y C G + W + V + + +Q Q+Q+L G+ L + A G P P YQW RNGVP+P AT+ LV V + D G Y C++ R+ E+ V++
Sbjct: 139 QWFKGKEEVPNSMS-PDLVISPVHVKDIGHYICRV--NCGEMFEFSQWAQVDVLNVNTNHGQSYHSLEGRLKLVTQPQSQKLYMGDALHLECGAVGRPIPRYQWHRNGVPVPNATKRKLVIPHVMQDDHGRYRCEISGSTERMWTNEVEVVV 287
BLAST of mRNA_Ecto-sp8_S_contig10463.740.1 vs. uniprot
Match: A0A2I4CI63_9TELE (mucosa-associated lymphoid tissue lymphoma translocation protein 1 n=2 Tax=Rivulidae TaxID=28771 RepID=A0A2I4CI63_9TELE) HSP 1 Score: 73.9 bits (180), Expect = 4.200e-10 Identity = 50/152 (32.89%), Postives = 69/152 (45.39%), Query Frame = 1
Query: 1183 QWFRGGNVLPGQTSRPFLTVSEVSLEDEGTYACFAVEESGRIGSTPLWEEATVRISEPPLVES------------QLQTQRLARGEMLAIVATASGVPQPEYQWRRNGVPIPGATRPMLVKHGVSEADMGTYTCDVYNVAGRVQWEEMAVIL 1602
QWF+ +P S P L +S V L+D G Y C SG W + V +S Q Q+QRL GE L + A G P P YQW RNG+PIP AT+ L+ V + G Y C++ + R+ E+ V++
Sbjct: 139 QWFKSREEVPNSAS-PELLISPVQLKDAGFYICRV--NSGDACEFSQWAQVDVLNGSTSYGQSYHSIDGRLKVVVQPQSQRLHVGETLQLECGAVGRPIPRYQWHRNGIPIPNATKRKLLIPHVMQDHHGRYRCEISSSTERMWSNEVHVVI 287
BLAST of mRNA_Ecto-sp8_S_contig10463.740.1 vs. uniprot
Match: A0A3Q3WYK6_MOLML (MALT paracaspase 1 n=1 Tax=Mola mola TaxID=94237 RepID=A0A3Q3WYK6_MOLML) HSP 1 Score: 73.6 bits (179), Expect = 5.420e-10 Identity = 49/152 (32.24%), Postives = 73/152 (48.03%), Query Frame = 1
Query: 1183 QWFRGGNVLPGQTSRPFLTVSEVSLEDEGTYAC------------FAVEESGRIGSTPLWEEATVRISEPPLVESQLQTQRLARGEMLAIVATASGVPQPEYQWRRNGVPIPGATRPMLVKHGVSEADMGTYTCDVYNVAGRVQWEEMAVIL 1602
QWF+ + +P S P L +S V ++D G Y C +A + +G T L + ++++ P Q QRL GE L + A G P P YQW RNGVPIP AT+ L H V + G Y C++ + R+ E+ + +
Sbjct: 148 QWFKAKDEVPNSFS-PDLVISPVGMKDAGFYICRVNCGDAFEFSQWAQVDVLNVGHTYLSLDGRLKVAIQP------QPQRLHTGENLQLECGAVGRPIPRYQWHRNGVPIPNATKRKLSPH-VMQEQHGRYRCEIRSSTERMWTSEVDITI 291 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig10463.740.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig10463.740.1 >prot_Ecto-sp8_S_contig10463.740.1 ID=prot_Ecto-sp8_S_contig10463.740.1|Name=mRNA_Ecto-sp8_S_contig10463.740.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=542bp VSDEVEDENRSQRRDGGRPTAATVRPQVLVDDETGYTTSEEQGDRECSTSback to top mRNA from alignment at Ecto-sp8_S_contig10463:2..3011+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig10463.740.1 ID=mRNA_Ecto-sp8_S_contig10463.740.1|Name=mRNA_Ecto-sp8_S_contig10463.740.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=3010bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10463:2..3011+ (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig10463:2..3011+ >mRNA_Ecto-sp8_S_contig10463.740.1 ID=mRNA_Ecto-sp8_S_contig10463.740.1|Name=mRNA_Ecto-sp8_S_contig10463.740.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=1626bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10463:2..3011+ (Ectocarpus species8 EcLAC_412)back to top |