mRNA_Ecto-sp8_S_contig104626.739.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig104626.739.1 vs. uniprot
Match: A0A2E3M1G9_9RICK (Acriflavine resistance protein B (Fragment) n=1 Tax=Rickettsiales bacterium TaxID=2026788 RepID=A0A2E3M1G9_9RICK) HSP 1 Score: 308 bits (788), Expect = 6.660e-98 Identity = 161/172 (93.60%), Postives = 167/172 (97.09%), Query Frame = 1
Query: 1 GTLYSQFGTIVTLCLLLSVVESKLILPSHLAHLPTKKTTKSGIAGLWGKVQDGADKGLNWFNKRLYQPALSATITYRYAAVLLFIALFILVMSLPLTGAVRVGFFPSMQGDTVSANLSLYSDASFGQTEQNLLRLERAAIEADKQLVEEKGADESGMKSLQVTASGDQSGTI 516
GTLYSQFGTIVTLCLLLSVVESKLILPSHLAHLPTKKTTK GIAGLWGKVQDGAD GLNWFN++LYQPALSATI YRYAAVLLFI LFI+VMSLPLTG VRVGFFPSMQGDTVSAN+SLYSDASFGQT++NLLRLERAAIEADKQLVEEKGADESGMKSLQVTASGDQSGTI
Sbjct: 461 GTLYSQFGTIVTLCLLLSVVESKLILPSHLAHLPTKKTTKKGIAGLWGKVQDGADNGLNWFNEKLYQPALSATIAYRYAAVLLFITLFIVVMSLPLTGVVRVGFFPSMQGDTVSANMSLYSDASFGQTDRNLLRLERAAIEADKQLVEEKGADESGMKSLQVTASGDQSGTI 632
BLAST of mRNA_Ecto-sp8_S_contig104626.739.1 vs. uniprot
Match: F5Z532_ALTNA (Acriflavin resistance protein n=12 Tax=Alteromonas TaxID=226 RepID=F5Z532_ALTNA) HSP 1 Score: 301 bits (770), Expect = 3.570e-93 Identity = 157/172 (91.28%), Postives = 166/172 (96.51%), Query Frame = 1
Query: 1 GTLYSQFGTIVTLCLLLSVVESKLILPSHLAHLPTKKTTKSGIAGLWGKVQDGADKGLNWFNKRLYQPALSATITYRYAAVLLFIALFILVMSLPLTGAVRVGFFPSMQGDTVSANLSLYSDASFGQTEQNLLRLERAAIEADKQLVEEKGADESGMKSLQVTASGDQSGTI 516
GTLYSQFGTIVTLCLLLSVVESKLILPSHLAHLPTKKTTK GIAGLWGKVQDGAD GLNWFN++LYQPALSATI YRYAAVLLFI LFI+VMSLPLTG VRVGFFPSMQGDTVSAN+SL+SDASFGQT++NLLRLERAAIEADKQL+EEKGAD SGM+SLQVTASGDQSGTI
Sbjct: 461 GTLYSQFGTIVTLCLLLSVVESKLILPSHLAHLPTKKTTKKGIAGLWGKVQDGADNGLNWFNEKLYQPALSATIAYRYAAVLLFITLFIVVMSLPLTGVVRVGFFPSMQGDTVSANMSLFSDASFGQTDRNLLRLERAAIEADKQLMEEKGADVSGMQSLQVTASGDQSGTI 632
BLAST of mRNA_Ecto-sp8_S_contig104626.739.1 vs. uniprot
Match: A0A075NT38_9ALTE (Acriflavine resistance protein B n=7 Tax=Alteromonadaceae TaxID=72275 RepID=A0A075NT38_9ALTE) HSP 1 Score: 266 bits (681), Expect = 1.950e-80 Identity = 140/172 (81.40%), Postives = 152/172 (88.37%), Query Frame = 1
Query: 1 GTLYSQFGTIVTLCLLLSVVESKLILPSHLAHLPTKKTTKSGIAGLWGKVQDGADKGLNWFNKRLYQPALSATITYRYAAVLLFIALFILVMSLPLTGAVRVGFFPSMQGDTVSANLSLYSDASFGQTEQNLLRLERAAIEADKQLVEEKGADESGMKSLQVTASGDQSGTI 516
GTLYSQFGTIVTLCLLLSVVESKLILP+HLAHLPTK T K GIAGLW KVQ AD GL WFN RLYQP L T+TYRYAAVL FIALF++VMSLPLTGAVRV FFPSMQGDTV+ANLSLYSDASFGQ E+NLL LE+ A+EAD+QL+ EKGA+ SG+ SLQVTASGDQSGTI
Sbjct: 461 GTLYSQFGTIVTLCLLLSVVESKLILPAHLAHLPTKTTPKKGIAGLWNKVQGKADAGLQWFNYRLYQPLLKVTVTYRYAAVLFFIALFVVVMSLPLTGAVRVSFFPSMQGDTVTANLSLYSDASFGQNERNLLLLEQNALEADRQLIAEKGAEGSGISSLQVTASGDQSGTI 632
BLAST of mRNA_Ecto-sp8_S_contig104626.739.1 vs. uniprot
Match: A0A7X5RL88_9ALTE (MMPL family transporter n=2 Tax=Alteromonas profundi TaxID=2696062 RepID=A0A7X5RL88_9ALTE) HSP 1 Score: 265 bits (676), Expect = 1.000e-79 Identity = 138/172 (80.23%), Postives = 154/172 (89.53%), Query Frame = 1
Query: 1 GTLYSQFGTIVTLCLLLSVVESKLILPSHLAHLPTKKTTKSGIAGLWGKVQDGADKGLNWFNKRLYQPALSATITYRYAAVLLFIALFILVMSLPLTGAVRVGFFPSMQGDTVSANLSLYSDASFGQTEQNLLRLERAAIEADKQLVEEKGADESGMKSLQVTASGDQSGTI 516
G LYSQFG IVT+CLLLSVVESKLILPSHLAHLPTKKT + GIA +WG VQD AD L WFN+R+YQP L+ATITYRYAAV LFIALF++VMSLPLTGAVRVGFFPSMQGDTV+AN+SLYSDASFGQTE+NLL LERAAI+AD L+EE GA +G+KSLQV+ASGDQSGTI
Sbjct: 461 GKLYSQFGMIVTICLLLSVVESKLILPSHLAHLPTKKTPQRGIARIWGNVQDKADDSLQWFNERIYQPVLNATITYRYAAVFLFIALFVVVMSLPLTGAVRVGFFPSMQGDTVTANMSLYSDASFGQTERNLLTLERAAIQADAALIEEVGAQGTGIKSLQVSASGDQSGTI 632
BLAST of mRNA_Ecto-sp8_S_contig104626.739.1 vs. uniprot
Match: A0A4U0ZJU1_9ALTE (Efflux RND transporter permease subunit n=31 Tax=Alteromonadaceae TaxID=72275 RepID=A0A4U0ZJU1_9ALTE) HSP 1 Score: 251 bits (642), Expect = 8.230e-75 Identity = 128/172 (74.42%), Postives = 148/172 (86.05%), Query Frame = 1
Query: 1 GTLYSQFGTIVTLCLLLSVVESKLILPSHLAHLPTKKTTKSGIAGLWGKVQDGADKGLNWFNKRLYQPALSATITYRYAAVLLFIALFILVMSLPLTGAVRVGFFPSMQGDTVSANLSLYSDASFGQTEQNLLRLERAAIEADKQLVEEKGADESGMKSLQVTASGDQSGTI 516
GTLYSQFGTIVTLCLLLSVVESKLILPSHLAHLPTK+ + G+ G+W KVQ AD GL WFN R+YQ L + YRYAAVLLF+ALF++V+SLPLTG VRV FFPSMQGDTVSAN+SLYSDAS+GQ E+NL+ LE+ A+EAD+QL +E GAD+SG+ SLQVTASGDQSGTI
Sbjct: 483 GTLYSQFGTIVTLCLLLSVVESKLILPSHLAHLPTKQKARRGLGGVWNKVQQKADGGLQWFNYRVYQRVLKVAVAYRYAAVLLFVALFVMVVSLPLTGVVRVSFFPSMQGDTVSANMSLYSDASYGQNERNLMLLEKNALEADRQLTQENGADKSGISSLQVTASGDQSGTI 654
BLAST of mRNA_Ecto-sp8_S_contig104626.739.1 vs. uniprot
Match: S5TET5_9GAMM (Acriflavine resistance protein B n=5 Tax=Piscirickettsiaceae TaxID=135616 RepID=S5TET5_9GAMM) HSP 1 Score: 240 bits (612), Expect = 1.120e-70 Identity = 119/172 (69.19%), Postives = 149/172 (86.63%), Query Frame = 1
Query: 1 GTLYSQFGTIVTLCLLLSVVESKLILPSHLAHLPTKKTTKSGIAGLWGKVQDGADKGLNWFNKRLYQPALSATITYRYAAVLLFIALFILVMSLPLTGAVRVGFFPSMQGDTVSANLSLYSDASFGQTEQNLLRLERAAIEADKQLVEEKGADESGMKSLQVTASGDQSGTI 516
GTLYSQFGT+VTLCLLLSVVESKLILP+HLAHLPTK+ T++G+AG+W K+Q AD GL WFN R+Y+ L TI YRYAA++ FIA+FI+V+SLPLTGAVRV FFPSMQGDTV+AN++L+SDASFGQ E+NLL LE+A +EADKQL++EK +G+ SLQ+ A+GDQSG++
Sbjct: 461 GTLYSQFGTVVTLCLLLSVVESKLILPAHLAHLPTKQQTRTGLAGIWNKIQTAADNGLQWFNYRVYKRLLKLTIAYRYAAIMFFIAVFIIVISLPLTGAVRVSFFPSMQGDTVTANMALHSDASFGQNEKNLLTLEQAVLEADKQLLQEKNKSGTGIGSLQILANGDQSGSL 632
BLAST of mRNA_Ecto-sp8_S_contig104626.739.1 vs. uniprot
Match: UPI001C0956D4 (efflux RND transporter permease subunit n=1 Tax=Alteromonas sp. C1M14 TaxID=2841567 RepID=UPI001C0956D4) HSP 1 Score: 229 bits (585), Expect = 6.460e-67 Identity = 121/172 (70.35%), Postives = 141/172 (81.98%), Query Frame = 1
Query: 1 GTLYSQFGTIVTLCLLLSVVESKLILPSHLAHLPTKKTTKSGIAGLWGKVQDGADKGLNWFNKRLYQPALSATITYRYAAVLLFIALFILVMSLPLTGAVRVGFFPSMQGDTVSANLSLYSDASFGQTEQNLLRLERAAIEADKQLVEEKGADESGMKSLQVTASGDQSGTI 516
G LYSQFGT+VT+CLLLSVVESKLILPSHLAHLPT + K G+A LWGKVQ GAD+GL FN R+YQPAL I YRY AV+LF+ALF+LV+ +PL G VRVGFFPSMQGDTVSA LSL SDASFGQT +NL RLE EAD+QL+E+ G + +G+ SLQVT SGDQSG++
Sbjct: 462 GKLYSQFGTVVTICLLLSVVESKLILPSHLAHLPTHRKPKKGLADLWGKVQRGADRGLMGFNLRIYQPALRKAIRYRYGAVMLFVALFVLVIGMPLNGMVRVGFFPSMQGDTVSATLSLQSDASFGQTAKNLERLETTLNEADQQLMEKVGKEGTGIGSLQVTGSGDQSGSL 633
BLAST of mRNA_Ecto-sp8_S_contig104626.739.1 vs. uniprot
Match: A0A1E7ZGB3_9ALTE (Acriflavine resistance protein B n=1 Tax=Alteromonas confluentis TaxID=1656094 RepID=A0A1E7ZGB3_9ALTE) HSP 1 Score: 225 bits (574), Expect = 2.170e-65 Identity = 118/172 (68.60%), Postives = 142/172 (82.56%), Query Frame = 1
Query: 1 GTLYSQFGTIVTLCLLLSVVESKLILPSHLAHLPTKKTTKSGIAGLWGKVQDGADKGLNWFNKRLYQPALSATITYRYAAVLLFIALFILVMSLPLTGAVRVGFFPSMQGDTVSANLSLYSDASFGQTEQNLLRLERAAIEADKQLVEEKGADESGMKSLQVTASGDQSGTI 516
G LYSQFG IVT+CLLLSVVESKLILP+HLAHLPT + K GIA LWGKVQ GAD+GL++FN+R+YQPAL I YRYA+V+LFIALFILV+ +PL G VRVGFFPSM GDTVSA ++L SDAS+GQ E+NL RLE +AD L+E+ G + SG+ +LQVTASGDQSG++
Sbjct: 462 GKLYSQFGMIVTICLLLSVVESKLILPAHLAHLPTHRKPKKGIADLWGKVQRGADRGLSFFNERMYQPALKKAIQYRYASVMLFIALFILVIGMPLNGIVRVGFFPSMPGDTVSATMTLQSDASYGQNEKNLTRLENTLNQADAFLMEKHGLEGSGIGNLQVTASGDQSGSL 633
BLAST of mRNA_Ecto-sp8_S_contig104626.739.1 vs. uniprot
Match: A0A346NKP4_9ALTE (Efflux RND transporter permease subunit n=1 Tax=Salinimonas sediminis TaxID=2303538 RepID=A0A346NKP4_9ALTE) HSP 1 Score: 224 bits (570), Expect = 7.750e-65 Identity = 116/172 (67.44%), Postives = 140/172 (81.40%), Query Frame = 1
Query: 1 GTLYSQFGTIVTLCLLLSVVESKLILPSHLAHLPTKKTTKSGIAGLWGKVQDGADKGLNWFNKRLYQPALSATITYRYAAVLLFIALFILVMSLPLTGAVRVGFFPSMQGDTVSANLSLYSDASFGQTEQNLLRLERAAIEADKQLVEEKGADESGMKSLQVTASGDQSGTI 516
G LYSQFGTIVTLCLLLSVVESKLILP+HLAHLPT + GIAG+WG +Q+ AD GL+W RLY+P L + YRYAAV FI L ILV+S+P++GAVRVGFFPSM GDTV A+++L+SDASFGQT+ NLLRLE A +ADKQL++E A SG+KSLQV ASGDQ+G++
Sbjct: 462 GKLYSQFGTIVTLCLLLSVVESKLILPAHLAHLPTHRKPGKGIAGIWGNIQNKADSGLSWVRDRLYRPVLQKVMLYRYAAVAGFITLLILVLSMPMSGAVRVGFFPSMPGDTVEASMTLHSDASFGQTQANLLRLENAVNQADKQLMQEHAATGSGIKSLQVAASGDQAGSL 633
BLAST of mRNA_Ecto-sp8_S_contig104626.739.1 vs. uniprot
Match: A0A385MZS4_9ALTE (Efflux RND transporter permease subunit n=2 Tax=Alteromonadaceae TaxID=72275 RepID=A0A385MZS4_9ALTE) HSP 1 Score: 224 bits (570), Expect = 7.750e-65 Identity = 117/172 (68.02%), Postives = 140/172 (81.40%), Query Frame = 1
Query: 1 GTLYSQFGTIVTLCLLLSVVESKLILPSHLAHLPTKKTTKSGIAGLWGKVQDGADKGLNWFNKRLYQPALSATITYRYAAVLLFIALFILVMSLPLTGAVRVGFFPSMQGDTVSANLSLYSDASFGQTEQNLLRLERAAIEADKQLVEEKGADESGMKSLQVTASGDQSGTI 516
G LYSQFG IVT+CLLLSVVESKLILPSHLAHLPT + + GIA LWGKVQ GAD+GL++FN+R+YQPAL I YRYAAV+LF+ALFILV+ +P+ G VRVGFFPSM GDTV A+++L SDASFGQ E+NL RLE +AD L+ G + SG+ +LQVTASGDQSG+I
Sbjct: 462 GKLYSQFGMIVTICLLLSVVESKLILPSHLAHLPTHRKPRKGIADLWGKVQRGADRGLSFFNERMYQPALRKAIQYRYAAVMLFVALFILVIGMPMNGVVRVGFFPSMPGDTVEASMTLQSDASFGQNEKNLTRLENTLNQADDFLMNNLGLEGSGIANLQVTASGDQSGSI 633 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig104626.739.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig104626.739.1 >prot_Ecto-sp8_S_contig104626.739.1 ID=prot_Ecto-sp8_S_contig104626.739.1|Name=mRNA_Ecto-sp8_S_contig104626.739.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=172bp GTLYSQFGTIVTLCLLLSVVESKLILPSHLAHLPTKKTTKSGIAGLWGKVback to top mRNA from alignment at Ecto-sp8_S_contig104626:3..518+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig104626.739.1 ID=mRNA_Ecto-sp8_S_contig104626.739.1|Name=mRNA_Ecto-sp8_S_contig104626.739.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=516bp|location=Sequence derived from alignment at Ecto-sp8_S_contig104626:3..518+ (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig104626:3..518+ >mRNA_Ecto-sp8_S_contig104626.739.1 ID=mRNA_Ecto-sp8_S_contig104626.739.1|Name=mRNA_Ecto-sp8_S_contig104626.739.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=516bp|location=Sequence derived from alignment at Ecto-sp8_S_contig104626:3..518+ (Ectocarpus species8 EcLAC_412)back to top |