mRNA_Ecto-sp8_S_contig10462.737.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig10462.737.1 vs. uniprot
Match: D7G427_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G427_ECTSI) HSP 1 Score: 82.0 bits (201), Expect = 1.300e-16 Identity = 38/39 (97.44%), Postives = 38/39 (97.44%), Query Frame = 1
Query: 85 SLRPTMLDEGCETVLREAGKLRGCVDEAYGALRDLQCEV 201
SLRPTMLDEGCE VLREAGKLRGCVDEAYGALRDLQCEV
Sbjct: 479 SLRPTMLDEGCEAVLREAGKLRGCVDEAYGALRDLQCEV 517
BLAST of mRNA_Ecto-sp8_S_contig10462.737.1 vs. uniprot
Match: A0A7S3MBM2_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MBM2_9STRA) HSP 1 Score: 79.7 bits (195), Expect = 8.400e-16 Identity = 37/55 (67.27%), Postives = 43/55 (78.18%), Query Frame = 1
Query: 37 RRQACLCIRNIAARGPSLRPTMLDEGCETVLREAGKLRGCVDEAYGALRDLQCEV 201
+RQ CL +RNIAARGP LRP +LD G E +LR AG++ VDEAYGALRDL CEV
Sbjct: 405 QRQGCLTVRNIAARGPELRPVLLDAGFEDLLRAAGRIMDVVDEAYGALRDLGCEV 459
BLAST of mRNA_Ecto-sp8_S_contig10462.737.1 vs. uniprot
Match: A0A835Z2B7_9STRA (Armadillo-type protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2B7_9STRA) HSP 1 Score: 75.5 bits (184), Expect = 2.560e-14 Identity = 35/56 (62.50%), Postives = 43/56 (76.79%), Query Frame = 1
Query: 37 RRQACLCIRNIAARGPSLRPTMLDEGCETVLREAGKLRGCVDEAYGALRDLQCEVR 204
+RQ CL IRN+AAR P LRP +LDEG E +L+ AGK +G VDEAY ALRDL C+ +
Sbjct: 379 QRQCCLFIRNVAARCPELRPVLLDEGFEDLLKTAGKHQGAVDEAYAALRDLGCQAQ 434
BLAST of mRNA_Ecto-sp8_S_contig10462.737.1 vs. uniprot
Match: F0WM58_9STRA (Uncharacterized protein AlNc14C153G7561 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WM58_9STRA) HSP 1 Score: 63.9 bits (154), Expect = 3.020e-10 Identity = 32/54 (59.26%), Postives = 34/54 (62.96%), Query Frame = 1
Query: 40 RQACLCIRNIAARGPSLRPTMLDEGCETVLREAGKLRGCVDEAYGALRDLQCEV 201
RQA L IRNI AR P + LDEG E +LR A L C EAYGALRDL CE
Sbjct: 409 RQASLAIRNIVARSPEFQKDFLDEGIEAMLRGALDLSSCQSEAYGALRDLNCET 462
BLAST of mRNA_Ecto-sp8_S_contig10462.737.1 vs. uniprot
Match: A0A5D6Y9J7_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y9J7_9STRA) HSP 1 Score: 60.8 bits (146), Expect = 3.690e-9 Identity = 28/49 (57.14%), Postives = 36/49 (73.47%), Query Frame = 1
Query: 58 IRNIAARGPSLRPTMLDEGCETVLREAGKLRGCVDEAYGALRDLQCEVR 204
+RN+ AR +LRP +LDEG E +LR A + RGC DEAY ALRDL C ++
Sbjct: 429 LRNLGARSVALRPRILDEGVEPLLRAAVQRRGCGDEAYAALRDLGCAIQ 477
BLAST of mRNA_Ecto-sp8_S_contig10462.737.1 vs. uniprot
Match: A0A024GL17_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GL17_9STRA) HSP 1 Score: 60.1 bits (144), Expect = 6.890e-9 Identity = 29/54 (53.70%), Postives = 34/54 (62.96%), Query Frame = 1
Query: 40 RQACLCIRNIAARGPSLRPTMLDEGCETVLREAGKLRGCVDEAYGALRDLQCEV 201
RQA L IRNI +R P + LD+G E +LR+A C EAYGALRDL CE
Sbjct: 410 RQASLAIRNIVSRSPEFQKDFLDQGIEVLLRDALAQFSCQSEAYGALRDLNCET 463
BLAST of mRNA_Ecto-sp8_S_contig10462.737.1 vs. uniprot
Match: K3WSJ3_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WSJ3_GLOUD) HSP 1 Score: 53.1 bits (126), Expect = 1.930e-6 Identity = 24/41 (58.54%), Postives = 31/41 (75.61%), Query Frame = 1
Query: 88 LRPTMLDEGCETVLREAGKLRGCVDEAYGALRDLQCEVRQS 210
LRP +LDE E +LR+A + RGC DEAY ALRDL C+++ S
Sbjct: 440 LRPRILDEDIEPLLRDAQRYRGCGDEAYAALRDLGCDIQLS 480
BLAST of mRNA_Ecto-sp8_S_contig10462.737.1 vs. uniprot
Match: A0A1S3VLI6_VIGRR (armadillo repeat-containing protein 6 n=6 Tax=Vigna TaxID=3913 RepID=A0A1S3VLI6_VIGRR) HSP 1 Score: 50.8 bits (120), Expect = 1.250e-5 Identity = 28/63 (44.44%), Postives = 35/63 (55.56%), Query Frame = 1
Query: 4 AAPNFPHVTQSRRQACLCIRNIAARGPSLRPTMLDEGCETVLREAGKLRG-CVDEAYGALRDL 189
A FP Q +R +CL IRN+ AR P R T+L G E +R+A + C D A ALRDL
Sbjct: 386 AMKKFPAAHQMQRNSCLMIRNLVARNPENRTTLLLNGIEKYIRKAKQTHSNCKDAATDALRDL 448
BLAST of mRNA_Ecto-sp8_S_contig10462.737.1 vs. uniprot
Match: E1ZQY2_CHLVA (Uncharacterized protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZQY2_CHLVA) HSP 1 Score: 50.8 bits (120), Expect = 1.260e-5 Identity = 26/56 (46.43%), Postives = 33/56 (58.93%), Query Frame = 1
Query: 25 VTQSRRQACLCIRNIAARGPSLRPTMLDEGCETVLREA-GKLRGCVDEAYGALRDL 189
T +RQAC+ IRN AAR P +R +LD+G E +LR+ C D ALRDL
Sbjct: 428 ATAVQRQACMAIRNSAARNPDVRAVLLDKGAEGLLRQLKAAYPSCADAGSAALRDL 483 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig10462.737.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig10462.737.1 >prot_Ecto-sp8_S_contig10462.737.1 ID=prot_Ecto-sp8_S_contig10462.737.1|Name=mRNA_Ecto-sp8_S_contig10462.737.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=70bp SAAPNFPHVTQSRRQACLCIRNIAARGPSLRPTMLDEGCETVLREAGKLRback to top mRNA from alignment at Ecto-sp8_S_contig10462:338..547+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig10462.737.1 ID=mRNA_Ecto-sp8_S_contig10462.737.1|Name=mRNA_Ecto-sp8_S_contig10462.737.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=210bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10462:338..547+ (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig10462:338..547+ >mRNA_Ecto-sp8_S_contig10462.737.1 ID=mRNA_Ecto-sp8_S_contig10462.737.1|Name=mRNA_Ecto-sp8_S_contig10462.737.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=210bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10462:338..547+ (Ectocarpus species8 EcLAC_412)back to top |