mRNA_Ecto-sp8_S_contig104323.693.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig104323.693.1 vs. uniprot
Match: UPI000C771D87 (voltage-dependent anion-selective channel-like n=1 Tax=Eurytemora affinis TaxID=88015 RepID=UPI000C771D87) HSP 1 Score: 208 bits (529), Expect = 7.750e-65 Identity = 97/152 (63.82%), Postives = 128/152 (84.21%), Query Frame = 1
Query: 1 NLASSPVVNISTSVGHGAYSLGYQTAFDSGKSALTKHNLALAYNAGDMILHATATDSKVFGGGIYLKNSPKLETGVTASSAVGGSSSFGIGCKYSLGPDASLRAKVNNASQVGLSYQQKLRDGVTVTMSANIDGNKLNEPGHKLGLCLEMEA 456
NLA++P +N++ SVGHGA+++GY T+FD+ KSA+TK++ A+ Y + +LH T D K FGGGIY + +P LETGV+ S+A+GGS++FG+GCKY LGPDAS+RAKV+N+S+VGLSYQQKLRDG+TVT+S+NIDG KLN PGHKLGL LEM A
Sbjct: 128 NLAANPAINLNASVGHGAWAVGYATSFDTAKSAITKNHFAVGYATKEAVLHCTCNDGKTFGGGIYHRINPSLETGVSISAALGGSAAFGVGCKYDLGPDASIRAKVDNSSKVGLSYQQKLRDGITVTLSSNIDGTKLNAPGHKLGLALEMSA 279
BLAST of mRNA_Ecto-sp8_S_contig104323.693.1 vs. uniprot
Match: A0A0U2VBK7_ACAPC (Mitochondrial porin n=1 Tax=Acartia pacifica TaxID=335913 RepID=A0A0U2VBK7_ACAPC) HSP 1 Score: 194 bits (493), Expect = 2.230e-59 Identity = 93/151 (61.59%), Postives = 122/151 (80.79%), Query Frame = 1
Query: 4 LASSPVVNISTSVGHGAYSLGYQTAFDSGKSALTKHNLALAYNAGDMILHATATDSKVFGGGIYLKNSPKLETGVTASSAVGGSSSFGIGCKYSLGPDASLRAKVNNASQVGLSYQQKLRDGVTVTMSANIDGNKLNEPGHKLGLCLEMEA 456
L +SPV+N+S SVGHG ++LGY TAFD+GK+A+ K++LAL Y+AGDM+ H TA D+K+FGGGIY K P LETGV+ +++ G++ FGIGCKY LG DAS+RAKV+N+S+VGLSYQQ LR G+T+T S +D KLN+PGHK G+ LEM A
Sbjct: 130 LTASPVINMSASVGHGPWALGYSTAFDTGKAAVVKNSLALGYSAGDMVCHVTANDAKMFGGGIYHKVRPGLETGVSVNTSAAGNTDFGIGCKYDLGSDASIRAKVDNSSKVGLSYQQVLRPGITMTASVLMDATKLNQPGHKFGMSLEMSA 280
BLAST of mRNA_Ecto-sp8_S_contig104323.693.1 vs. uniprot
Match: A0A7D9D2S2_9CUCU (Voltage-dependent anion-selective channel (Fragment) n=1 Tax=Bitoma cylindrica TaxID=1661817 RepID=A0A7D9D2S2_9CUCU) HSP 1 Score: 164 bits (415), Expect = 1.350e-47 Identity = 83/150 (55.33%), Postives = 106/150 (70.67%), Query Frame = 1
Query: 7 ASSPVVNISTSVGHGAYSLGYQTAFDSGKSALTKHNLALAYNAGDMILHATATDSKVFGGGIYLKNSPKLETGVT-ASSAVGGSSSFGIGCKYSLGPDASLRAKVNNASQVGLSYQQKLRDGVTVTMSANIDGNKLNEPGHKLGLCLEME 453
AS P++ S +GH + GYQTAFD+ KS LTK+N AL + GD +LH D + FGG IY K SPKLETG+ A SA ++ FGIG Y+L DASLRAK+NN+SQ+GL YQQ+LR+G+T+T+SA IDG N GHK+GL LE+E
Sbjct: 132 ASGPIIQASGVIGHQGWLAGYQTAFDTSKSKLTKNNFALGFTTGDFVLHTNVDDGQEFGGSIYQKISPKLETGIQLAWSAGSNNTKFGIGAGYTLDQDASLRAKINNSSQIGLGYQQRLREGITLTLSALIDGKNFNNGGHKIGLALELE 281
BLAST of mRNA_Ecto-sp8_S_contig104323.693.1 vs. uniprot
Match: A0A7D9D3S5_9COLE (Voltage-dependent anion-selective channel (Fragment) n=1 Tax=Xylobiops basilaris TaxID=1661920 RepID=A0A7D9D3S5_9COLE) HSP 1 Score: 163 bits (412), Expect = 3.710e-47 Identity = 82/152 (53.95%), Postives = 110/152 (72.37%), Query Frame = 1
Query: 1 NLASSPVVNISTSVGHGAYSLGYQTAFDSGKSALTKHNLALAYNAGDMILHATATDSKVFGGGIYLKNSPKLETGVTASSAVGGSSS-FGIGCKYSLGPDASLRAKVNNASQVGLSYQQKLRDGVTVTMSANIDGNKLNEPGHKLGLCLEME 453
+LA+ P+++ S VG+ + GYQTAFD+ KS LTK+N AL ++ GD ILH D + FGG IY + SPKLETG+ + + G +++ FGIG KY L DAS+RAKVNN+SQ+GL YQQ+LRDG+ +T+SA IDG N GHK+GL LE+E
Sbjct: 129 DLANGPLISASAVVGYQGWLAGYQTAFDTQKSKLTKNNFALGFSTGDFILHTNVDDGQEFGGSIYQRVSPKLETGIQLAWSAGSNNTRFGIGAKYDLDKDASIRAKVNNSSQIGLGYQQRLRDGILLTLSALIDGKNFNNGGHKIGLALELE 280
BLAST of mRNA_Ecto-sp8_S_contig104323.693.1 vs. uniprot
Match: D6WWM0_TRICA (Voltage-dependent anion-selective channel-like Protein n=6 Tax=Tenebrionidae TaxID=7065 RepID=D6WWM0_TRICA) HSP 1 Score: 164 bits (415), Expect = 7.280e-47 Identity = 84/151 (55.63%), Postives = 108/151 (71.52%), Query Frame = 1
Query: 7 ASSPVVNISTSVGHGAYSLGYQTAFDSGKSALTKHNLALAYNAGDMILHATATDSKVFGGGIYLKNSPKLETGVT-ASSAVGGSSSFGIGCKYSLGPDASLRAKVNNASQVGLSYQQKLRDGVTVTMSANIDGNKLNEPGHKLGLCLEMEA 456
+S P++ + VGH + GYQTAFD+ KS LTK+N AL ++ GD ILH D + FGG IY K SPKLETG+ A SA ++ FGIG KY L DA++RAKVNN+SQ+GL YQQ+LR+GVT+T+SA IDG N GHK+GL +E+EA
Sbjct: 197 SSGPLIQAAAVVGHQGWLAGYQTAFDTQKSKLTKNNFALGFSTGDFILHTNVDDGQEFGGSIYQKLSPKLETGIQLAWSAGSNNTKFGIGAKYDLDQDAAIRAKVNNSSQIGLGYQQRLREGVTLTLSALIDGKNFNNGGHKIGLAVELEA 347
BLAST of mRNA_Ecto-sp8_S_contig104323.693.1 vs. uniprot
Match: A0A7J7A1I8_9COLE (Uncharacterized protein n=1 Tax=Lamprigera yunnana TaxID=370605 RepID=A0A7J7A1I8_9COLE) HSP 1 Score: 162 bits (410), Expect = 7.830e-47 Identity = 82/148 (55.41%), Postives = 106/148 (71.62%), Query Frame = 1
Query: 16 PVVNISTSVGHGAYSLGYQTAFDSGKSALTKHNLALAYNAGDMILHATATDSKVFGGGIYLKNSPKLETGVTASSAVGGSSS-FGIGCKYSLGPDASLRAKVNNASQVGLSYQQKLRDGVTVTMSANIDGNKLNEPGHKLGLCLEMEA 456
P+++ S +G+ + GYQ AFD+ ++ LTK+N AL ++ GD ILH D FGG IY K SP+LETG+ S + G + + FGIG KY+L PDAS+RAKVNNASQVGL YQQ+LRDGVT+T+S IDG N GHK+GL LE+EA
Sbjct: 135 PIISGSGVIGYQGWLAGYQAAFDTQRTELTKNNFALGFSTGDFILHTNVDDGHDFGGSIYQKISPQLETGIQLSWSAGSNDTKFGIGAKYNLDPDASIRAKVNNASQVGLGYQQRLRDGVTITLSTLIDGKNFNNGGHKIGLALELEA 282
BLAST of mRNA_Ecto-sp8_S_contig104323.693.1 vs. uniprot
Match: A0A7D9H544_9COLE (Voltage-dependent anion-selective channel (Fragment) n=1 Tax=Hydroscapha redfordi TaxID=931173 RepID=A0A7D9H544_9COLE) HSP 1 Score: 161 bits (408), Expect = 1.520e-46 Identity = 83/147 (56.46%), Postives = 104/147 (70.75%), Query Frame = 1
Query: 16 PVVNISTSVGHGAYSLGYQTAFDSGKSALTKHNLALAYNAGDMILHATATDSKVFGGGIYLKNSPKLETGVTAS-SAVGGSSSFGIGCKYSLGPDASLRAKVNNASQVGLSYQQKLRDGVTVTMSANIDGNKLNEPGHKLGLCLEME 453
P++ + VG+ + GYQTAFDS KS LTK+N AL ++ GD ILH D + FGG I+ K SP+LET V+ + S+ + FGIG KY L +AS+RAKVNNASQ+GL YQQKLRDG+T+T+SA IDG N GHKLGL LEME
Sbjct: 135 PLIEAAAVVGYEGWLAGYQTAFDSQKSKLTKNNFALGFSTGDFILHTNVDDGQEFGGSIFQKISPRLETAVSLNWSSASNDTKFGIGAKYELDKEASIRAKVNNASQIGLGYQQKLRDGITLTLSAMIDGKNFNAGGHKLGLALEME 281
BLAST of mRNA_Ecto-sp8_S_contig104323.693.1 vs. uniprot
Match: A0A7D9D4L1_9COLE (Voltage-dependent anion-selective channel (Fragment) n=1 Tax=Hydrochara caraboides TaxID=1208885 RepID=A0A7D9D4L1_9COLE) HSP 1 Score: 161 bits (408), Expect = 1.570e-46 Identity = 83/148 (56.08%), Postives = 106/148 (71.62%), Query Frame = 1
Query: 16 PVVNISTSVGHGAYSLGYQTAFDSGKSALTKHNLALAYNAGDMILHATATDSKVFGGGIYLKNSPKLETGVTASSAVGGSSS-FGIGCKYSLGPDASLRAKVNNASQVGLSYQQKLRDGVTVTMSANIDGNKLNEPGHKLGLCLEMEA 456
P++ S VG+ + GYQTAFDS KS LTK+N AL ++ GD ILH D + FGG IY + SP+LETG+ + + G +++ FGIG KY L DA +RAKVNNASQVGL YQQ+LRDG+T+T+SA IDG N GHK+GL LE+EA
Sbjct: 135 PLIGGSLVVGYQGWLAGYQTAFDSEKSKLTKNNFALGFSTGDFILHTNVDDGQEFGGSIYQRVSPRLETGIQLAWSAGSNNTRFGIGAKYDLDQDACVRAKVNNASQVGLGYQQRLRDGITLTLSALIDGKNFNNGGHKIGLALELEA 282
BLAST of mRNA_Ecto-sp8_S_contig104323.693.1 vs. uniprot
Match: A0A7D9D323_CETAU (Voltage-dependent anion-selective channel (Fragment) n=2 Tax=Scarabaeidae TaxID=7055 RepID=A0A7D9D323_CETAU) HSP 1 Score: 160 bits (406), Expect = 3.050e-46 Identity = 81/147 (55.10%), Postives = 106/147 (72.11%), Query Frame = 1
Query: 16 PVVNISTSVGHGAYSLGYQTAFDSGKSALTKHNLALAYNAGDMILHATATDSKVFGGGIYLKNSPKLETGVTASSAVGGSSS-FGIGCKYSLGPDASLRAKVNNASQVGLSYQQKLRDGVTVTMSANIDGNKLNEPGHKLGLCLEME 453
PV++ S +G+ + GYQTAFD+ LTK+N AL ++ GD+ILH+ D + FGG IY + SPKLETGV + + G S++ FGIG KY L DAS+RAKVNN SQ+GL YQQ+LRDG+T+T+SA IDG N GHK+GL LE+E
Sbjct: 135 PVIHASAVIGYQGWLAGYQTAFDTQNKKLTKNNFALGFSTGDLILHSNVDDGQEFGGSIYQRISPKLETGVQLAWSSGSSNTRFGIGAKYDLDRDASIRAKVNNTSQIGLGYQQRLRDGITLTLSALIDGKNFNSGGHKIGLALELE 281
BLAST of mRNA_Ecto-sp8_S_contig104323.693.1 vs. uniprot
Match: A0A6M2DKK1_9NEOP (Putative voltage-dependent anion-selective channel isoform x1 (Fragment) n=2 Tax=Pulicidae TaxID=7511 RepID=A0A6M2DKK1_9NEOP) HSP 1 Score: 160 bits (406), Expect = 3.210e-46 Identity = 81/150 (54.00%), Postives = 105/150 (70.00%), Query Frame = 1
Query: 10 SSPVVNISTSVGHGAYSLGYQTAFDSGKSALTKHNLALAYNAGDMILHATATDSKVFGGGIYLKNSPKLETGVTASSAVGGSSS-FGIGCKYSLGPDASLRAKVNNASQVGLSYQQKLRDGVTVTMSANIDGNKLNEPGHKLGLCLEMEA 456
S P++N S VG+ + GYQT FDS S +TK+N AL ++ GD ILH D + FGG IY K S KL+TG+ + + G +++ FGIGCKY+L DA +RAKVNN SQ+GL YQQKLRDG+T+T+SA IDG N GHK+G LE+EA
Sbjct: 134 SGPLINASAVVGYQGWLAGYQTGFDSENSKVTKNNFALGFSTGDFILHTNVDDGQEFGGSIYQKVSSKLDTGIQLNWSAGANNTRFGIGCKYNLDNDAVVRAKVNNVSQIGLGYQQKLRDGITLTLSAQIDGKNFNSGGHKVGAALELEA 283 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig104323.693.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig104323.693.1 >prot_Ecto-sp8_S_contig104323.693.1 ID=prot_Ecto-sp8_S_contig104323.693.1|Name=mRNA_Ecto-sp8_S_contig104323.693.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=153bp NLASSPVVNISTSVGHGAYSLGYQTAFDSGKSALTKHNLALAYNAGDMILback to top mRNA from alignment at Ecto-sp8_S_contig104323:63..521- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig104323.693.1 ID=mRNA_Ecto-sp8_S_contig104323.693.1|Name=mRNA_Ecto-sp8_S_contig104323.693.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=459bp|location=Sequence derived from alignment at Ecto-sp8_S_contig104323:63..521- (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig104323:63..521- >mRNA_Ecto-sp8_S_contig104323.693.1 ID=mRNA_Ecto-sp8_S_contig104323.693.1|Name=mRNA_Ecto-sp8_S_contig104323.693.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=459bp|location=Sequence derived from alignment at Ecto-sp8_S_contig104323:63..521- (Ectocarpus species8 EcLAC_412)back to top |