mRNA_Ecto-sp8_S_contig10430.690.1 (mRNA) Ectocarpus species8 EcLAC_412

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp8_S_contig10430.690.1
Unique NamemRNA_Ecto-sp8_S_contig10430.690.1
TypemRNA
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Homology
[Close]
BLAST of mRNA_Ecto-sp8_S_contig10430.690.1 vs. uniprot
Match: A0A6H5K3T2_9PHAE (TPM_phosphatase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K3T2_9PHAE)

HSP 1 Score: 227 bits (579), Expect = 3.060e-73
Identity = 111/112 (99.11%), Postives = 111/112 (99.11%), Query Frame = 1 
Query:    1 LAVKDYWKVDDKTIVMVVDSGDDDRKSGAVNILNFNVGDGLRLGLPPQFWQRLQNKYGNRFFVRDNGVDGAIISAVDSITLCLRSETGFCVDPPDLKKVANDQTVLESIGRR 336
            LAVKDYWKVDDKTIVMVVDSGDDDRKSGAVNILNFNVGDGLRLGLPPQFWQRLQNKYGNRFFVRDNGVDGAIISAVDSITLCLRSETGFCVDPPDLKKVANDQ VLESIGRR
Sbjct:  159 LAVKDYWKVDDKTIVMVVDSGDDDRKSGAVNILNFNVGDGLRLGLPPQFWQRLQNKYGNRFFVRDNGVDGAIISAVDSITLCLRSETGFCVDPPDLKKVANDQAVLESIGRR 270
[Close]
BLAST of mRNA_Ecto-sp8_S_contig10430.690.1 vs. uniprot
Match: A0A7R9YCX5_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YCX5_9STRA)

HSP 1 Score: 128 bits (321), Expect = 3.240e-35
Identity = 64/106 (60.38%), Postives = 73/106 (68.87%), Query Frame = 1 
Query:    1 LAVKDYWKVDDKTIVMVVDSGDDDRKSGAVNILNFNVGDGLRLGLPPQFWQRLQNKYGNRFFVRDNGVDGAIISAVDSITLCLRSETGFCVDPPDLKKVANDQTVL 318
            LAVKDYW VD+ TIV+V D G   RK    N+LNFNVGD  RL LPPQFW RLQN YGN+F+V +NG D AI+ AVD I  CLR   G+CVDP D  KV  + T L
Sbjct:   83 LAVKDYWAVDENTIVIVADKGGFGRKGAVTNLLNFNVGDNFRLSLPPQFWTRLQNSYGNKFYVEENGDDKAILRAVDVINSCLRR--GYCVDPRDALKVNEEFTSL 186
[Close]
BLAST of mRNA_Ecto-sp8_S_contig10430.690.1 vs. uniprot
Match: A0A7S1UBQ0_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UBQ0_9STRA)

HSP 1 Score: 120 bits (302), Expect = 6.260e-32
Identity = 60/99 (60.61%), Postives = 70/99 (70.71%), Query Frame = 1 
Query:    1 LAVKDYWKVDDKTIVMVVDSGDDDRKSGAVNILNFNVGDGLRLGLPPQFWQRLQNKYGNRFFVRDNGVDGAIISAVDSITLCLRSETGFCVDPPDLKKV 297
            LA+KDYW VD+ TIV+V D G   RK  A N+LNFNVGD  RL LP  FWQRLQN YGN+F+V +NG D AI+ AVD+I  CL+   GFC DP D  KV
Sbjct:  121 LAIKDYWGVDENTIVIVADKGGFGRKGVATNLLNFNVGDAFRLSLPATFWQRLQNFYGNKFYVEENGDDKAILRAVDTINACLKR--GFCNDPKDALKV 217
[Close]
BLAST of mRNA_Ecto-sp8_S_contig10430.690.1 vs. uniprot
Match: A0A7S4JNH9_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4JNH9_9EUKA)

HSP 1 Score: 119 bits (299), Expect = 2.220e-31
Identity = 57/94 (60.64%), Postives = 69/94 (73.40%), Query Frame = 1 
Query:    1 LAVKDYWKVDDKTIVMVVDSGDDDRKSGAVNILNFNVGDGLRLGLPPQFWQRLQNKYGNRFFVRDNGVDGAIISAVDSITLCLRSETGFCVDPP 282
            LA+KDYW +DD++IV+VVD G   +  G  NILNFNV DG++L LP QFW RLQ+ +GN FFVRDNG D AI  AVD+I  CLR E  +CVD P
Sbjct:   96 LAIKDYWGLDDRSIVLVVDKGQS-KGGGVANILNFNVADGIKLSLPNQFWTRLQSTFGNNFFVRDNGEDIAITRAVDTIDYCLRDELAYCVDVP 188
[Close]
BLAST of mRNA_Ecto-sp8_S_contig10430.690.1 vs. uniprot
Match: L1J2R5_GUITC (TPM_phosphatase domain-containing protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1J2R5_GUITC)

HSP 1 Score: 120 bits (300), Expect = 3.770e-31
Identity = 60/102 (58.82%), Postives = 76/102 (74.51%), Query Frame = 1 
Query:    1 LAVKDYWKVDDKTIVMVVDSGDDDRKSGAVNILNFNVGDGLRLGLPPQFWQRLQNKYGNRFFVRDNGVDGAIISAVDSITLCLRSETGFCVD-PPDLKKVAN 303
            LA+KDYW VDDKTIVMVVD G    K+G  NILNFNVG G+ L LPP FW RL+N +G  F+V++NG D A+I+AVD++  CLR   GFC D P ++K++AN
Sbjct:  168 LAIKDYWGVDDKTIVMVVDRGSG--KAGQANILNFNVGQGVELALPPVFWTRLRNFFGTVFYVKENGEDAAVINAVDAVVGCLRQ--GFCTDVPKEMKEIAN 265
[Close]
BLAST of mRNA_Ecto-sp8_S_contig10430.690.1 vs. uniprot
Match: A0A7S3B305_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3B305_9EUKA)

HSP 1 Score: 117 bits (292), Expect = 3.820e-30
Identity = 55/94 (58.51%), Postives = 68/94 (72.34%), Query Frame = 1 
Query:    1 LAVKDYWKVDDKTIVMVVDSGDDDRKSGAVNILNFNVGDGLRLGLPPQFWQRLQNKYGNRFFVRDNGVDGAIISAVDSITLCLRSETGFCVDPP 282
            LA+KDYW +DD++IVM+VD G      G  NILNFNV DG++L LP QFW RLQ+ +GN FFV++NG D AI  AVD+I  CLR E  +CVD P
Sbjct:  117 LAIKDYWGLDDRSIVMIVDKG----TKGTANILNFNVADGIKLSLPNQFWTRLQSTFGNNFFVKENGEDIAITRAVDTIDYCLRDELAYCVDVP 206
[Close]
BLAST of mRNA_Ecto-sp8_S_contig10430.690.1 vs. uniprot
Match: A0A1E7FLC3_9STRA (TPM_phosphatase domain-containing protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FLC3_9STRA)

HSP 1 Score: 111 bits (277), Expect = 1.600e-28
Identity = 54/101 (53.47%), Postives = 68/101 (67.33%), Query Frame = 1 
Query:    1 LAVKDYWKV------DDKTIVMVVDSGDDDRKSGAVNILNFNVGDGLRLGLPPQFWQRLQNKYGNRFFVRDNGVDGAIISAVDSITLCLRSETGFCVDPPD 285
            LA++DYW +      DDK IV++VD     +  G  N+LNFNVGDG++  LP  FW RL  KYG  FFVRDNG+D AI +A+++I  CLRSE GFC  PPD
Sbjct:   85 LAIRDYWSLGKDDQKDDKYIVLIVD-----QFGGRGNVLNFNVGDGIKFALPNVFWTRLSGKYGTTFFVRDNGIDVAIETAIEAIVTCLRSEDGFCTSPPD 180
[Close]
BLAST of mRNA_Ecto-sp8_S_contig10430.690.1 vs. uniprot
Match: A0A836CHD3_9STRA (Thylakoid lumen 15.0 kDa protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHD3_9STRA)

HSP 1 Score: 112 bits (279), Expect = 2.380e-28
Identity = 54/93 (58.06%), Postives = 66/93 (70.97%), Query Frame = 1 
Query:    4 AVKDYWKVDDKTIVMVVDSGDDDRKSGAVNILNFNVGDGLRLGLPPQFWQRLQNKYGNRFFVRDNGVDGAIISAVDSITLCLRSETGFCVDPP 282
            A+KDYW VDDK+IV++ D G      G  N+LNFNVG+GL+  LP  FW RLQ+KYG  FFVRDNG D AII A+D+I  CL+   G+CVD P
Sbjct:  143 AIKDYWNVDDKSIVLIADRG----AKGTANLLNFNVGEGLKFQLPNAFWTRLQSKYGTGFFVRDNGEDQAIILAIDTIAYCLKQ--GYCVDVP 229
[Close]
BLAST of mRNA_Ecto-sp8_S_contig10430.690.1 vs. uniprot
Match: A0A1Z5KJZ6_FISSO (TPM_phosphatase domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KJZ6_FISSO)

HSP 1 Score: 110 bits (274), Expect = 1.050e-27
Identity = 56/101 (55.45%), Postives = 72/101 (71.29%), Query Frame = 1 
Query:    1 LAVKDYWKV------DDKTIVMVVDSGDDDRKSGAVNILNFNVGDGLRLGLPPQFWQRLQNKYGNRFFVRDNGVDGAIISAVDSITLCLRSETGFCVDPPD 285
            LA++DYW +      DDK IV+VVD     +  G  N+LNFNVGDG++L LP  FW RLQ K+GN F+VRDNG+D AI +AV++IT CLRSE  +CV+ PD
Sbjct:  118 LAIRDYWDLGKEGQKDDKYIVLVVD-----QFGGKGNVLNFNVGDGVKLNLPNVFWTRLQAKFGNTFYVRDNGIDLAITNAVEAITTCLRSEDQYCVNVPD 213
[Close]
BLAST of mRNA_Ecto-sp8_S_contig10430.690.1 vs. uniprot
Match: A0A7S4RS03_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RS03_9STRA)

HSP 1 Score: 110 bits (275), Expect = 1.130e-27
Identity = 56/101 (55.45%), Postives = 68/101 (67.33%), Query Frame = 1 
Query:    1 LAVKDYWKV------DDKTIVMVVDSGDDDRKSGAVNILNFNVGDGLRLGLPPQFWQRLQNKYGNRFFVRDNGVDGAIISAVDSITLCLRSETGFCVDPPD 285
            LA++DYW +      DDK IV+VVD     +  G  NILNFNVGDG++  LP  FW RL  KYG  FFV+DNGVD A+ +AV++I  CLRSE GFC  PPD
Sbjct:  136 LAIRDYWSLGKEDQKDDKYIVLVVD-----QFGGRGNILNFNVGDGVKFALPNVFWTRLSGKYGTTFFVKDNGVDVAVENAVEAIVSCLRSEDGFCTSPPD 231
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig10430.690.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K3T2_9PHAE3.060e-7399.11TPM_phosphatase domain-containing protein n=2 Tax=... [more]
A0A7R9YCX5_9STRA3.240e-3560.38Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S1UBQ0_9STRA6.260e-3260.61Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S4JNH9_9EUKA2.220e-3160.64Hypothetical protein n=1 Tax=Prymnesium polylepis ... [more]
L1J2R5_GUITC3.770e-3158.82TPM_phosphatase domain-containing protein n=2 Tax=... [more]
A0A7S3B305_9EUKA3.820e-3058.51Hypothetical protein n=1 Tax=Haptolina ericina Tax... [more]
A0A1E7FLC3_9STRA1.600e-2853.47TPM_phosphatase domain-containing protein (Fragmen... [more]
A0A836CHD3_9STRA2.380e-2858.06Thylakoid lumen 15.0 kDa protein n=1 Tax=Tribonema... [more]
A0A1Z5KJZ6_FISSO1.050e-2755.45TPM_phosphatase domain-containing protein n=2 Tax=... [more]
A0A7S4RS03_9STRA1.130e-2755.45Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig10430contigEcto-sp8_S_contig10430:1..3224 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score229.9
Seed ortholog evalue5.7e-58
Seed eggNOG ortholog2880.D8LD75
Model size339
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0009507,GO:0009536,GO:0009579,GO:0031977,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044436,GO:0044444,GO:0044464
Exons5
EggNOG OGs28NXC@1,2QVHQ@2759
Cds size339
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681143141.751133-CDS-Ecto-sp8_S_contig10430:0..241681143141.751133-CDS-Ecto-sp8_S_contig10430:0..24Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig10430 1..24 +
1681143141.7609756-CDS-Ecto-sp8_S_contig10430:594..6581681143141.7609756-CDS-Ecto-sp8_S_contig10430:594..658Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig10430 595..658 +
1681143141.76981-CDS-Ecto-sp8_S_contig10430:1242..12971681143141.76981-CDS-Ecto-sp8_S_contig10430:1242..1297Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig10430 1243..1297 +
1681143141.778413-CDS-Ecto-sp8_S_contig10430:1887..19951681143141.778413-CDS-Ecto-sp8_S_contig10430:1887..1995Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig10430 1888..1995 +
1681143141.786759-CDS-Ecto-sp8_S_contig10430:3136..32241681143141.786759-CDS-Ecto-sp8_S_contig10430:3136..3224Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig10430 3137..3224 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig10430.690.1prot_Ecto-sp8_S_contig10430.690.1Ectocarpus species8 EcLAC_412polypeptideEcto-sp8_S_contig10430 1..3224 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp8_S_contig10430.690.1

>prot_Ecto-sp8_S_contig10430.690.1 ID=prot_Ecto-sp8_S_contig10430.690.1|Name=mRNA_Ecto-sp8_S_contig10430.690.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=113bp
LAVKDYWKVDDKTIVMVVDSGDDDRKSGAVNILNFNVGDGLRLGLPPQFW
QRLQNKYGNRFFVRDNGVDGAIISAVDSITLCLRSETGFCVDPPDLKKVA
NDQTVLESIGRR*
back to top

mRNA from alignment at Ecto-sp8_S_contig10430:1..3224+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp8_S_contig10430.690.1 ID=mRNA_Ecto-sp8_S_contig10430.690.1|Name=mRNA_Ecto-sp8_S_contig10430.690.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=3224bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10430:1..3224+ (Ectocarpus species8 EcLAC_412)
CTCGCCGTAAAGGACTACTGGAAGGTGGGTGCGGGAGAAGTTGATGTGCG
GAAGAATAGTCGCAATGTGCGGCAGAATGTATGTGGTCAACAGTGTGCGG
AAGAGTAGTCGCAATATGCGGCGGAAAAAAATATGGTCCAAGCTTGGGGA
AGATTAGTCGCCATGTGCGGCAGAATAACATGTGGCCGAAGTGTGCGGAT
GAATAGTCGCAACGTGCGACAGAATATGTGTAGCCAAGGTGTGCGGAAGA
ATAGGCGCGATGTGCGGAAGAATATGTGTTGAGTCAAAATTGTGCAGAAG
AATAGTCGCAGTGTACAGCAAAATATATGTGGCCGAAGTGTGCTGCGGCA
GACGATATAGGAGGGTAAAGGTATGTGTTTCATGCGCAGAGAAGGTTTTT
TTTTTTTGTCTTCTTGGCGTCCACCACACACAATTTTTGCATCGCTGCCG
CTGCTTTAGAGTAGTGTTAGCGCAGAGGTGTTTGTGCGGTGAAAGCGAAG
GAACGGCCATCTAAAACCAAACGATATATATCCCTGATGCTATCACAAGC
AACGAAAATTACTAAAAAACAAACGACGACGGCAACGATAACAGGTGGAT
GACAAGACGATCGTTATGGTCGTCGACAGCGGCGATGACGACAGGAAATC
AGGGGCAGGTGAGAGCCTTTGTCTAACCCTTGAAAGTGCTAGAAGGGTGT
TTATGGCCAAAGTCGTCGCCGAAGACATGACGGAACGTTCCACCCCGATC
CCGGTGCTTCATGAATTGTTCTGTGAATACTCTGATTTCTGCCGATTTTT
TTTTTCTTCTTTTTGCCCCAAGGGTCAAGGTACAGCAGCATATCAACTAC
CACAGTGTAGCCTCCCTCACTTTTTTCCCGTGTTTTTTTTTTTTGTACCA
CATCCTCCGCGCGCATGACTGTGTACGGGGAGAAGGTGCGTCTTGCGCCG
TGCCATTGCGAACCAAGCTCCGGATTTCAAAAACACATGCCAAAGCCCGC
CATTTCATCCCTCGGTCTCATTTCTGTTTATTGAAGCATTTATTTTCATC
GTTTTTTATGATTTGTCGGCTTGGACACGAAAATAAACGTTTACCAGCTT
TAAGCTCGATGAATTTAATTTTATTTATTTTTATTTATTTATTTTTATTT
TTTTCGAGCGAGACGCGAATGACGCCCACCCTTTTCCCTGCCCTTCTTCC
CCTCTGGCCGTGCGTCTGCTGTGCGGGCGAATTAAATCGCAGTGAACATC
CTCAACTTCAACGTGGGAGACGGCTTGCGCCTGGGCCTGCCTCCCCAGTG
AGTCCCGTGGGATGAACTACCAGCACAAGTTTTTCGTTAGTTCTGTAGAT
GCAACCTTGGGCCTTGCGAAAAAGTAGTAAACGAGGTTTAGATGGAGAAG
GATCGGTGGGCGAACCCCTTGGTAGGGACAATCTTGCACCTTGCGAACAT
GAAAAAATAGTTTTAGGTGGAGAAGGATCGGTGGCCGAATCCCTTGGTAG
GGACAATCTTGCGCCTTGCGAATATGAAAAAAGATGGACAAGGATCAGTG
GGGCAATCCCTTTGTAGATACAGCCTTGGGCCATGCAAAAATGAAAAAAT
AGTTTCTGATGGACAAGGATCGGTGGCGCAACCCCTATCGTGTGAATATG
CCTTTTTTGTGTCTCGAGCAGGTTTTGGCAGAGGGTGCAGAACTTACAGC
AGTAGTTCTGTAGATACAACCTTGGGCCTTGCGAAAAAAACAAAAAAAAG
AGCTTTAGTTGGAGAAGGATCGGCGGGCCAATCCCTTTGTAGATACACCC
TAAGAGTAAGGAATTAGTATTTTTAGATGGATATAATTGGTGGCCCAATC
CCTTCGTTTCATGGTTTTTGTTTTGTTTCTCGAGCAGGTTTTGGCAGAGG
TTGCAGAACAAGTACGGCAACAGGTTCTTCGTGAGGGACAACGGAGTCGA
CGGGGCCATCATCAGCGCGGTGGATAGCATCACCCTGTGCCTCAGGTTTG
ACGAACGATCCATGTATCTGATCCGAAATCGCAACCGACCCAGCCATGTC
AATACCTTTCGTTATCGCCTTGGGTGTGCACCATGCCCCAGCCTTTGGTA
AAAGTGAGAGTGCTTGGGCGCAGGGAGGGAAAGCGTGCGACCCGGTTCGA
TTTTGGGAGGCGGCACTGCTGCCCTCCTTTTTCGTACCCGATACACACGC
ATTTTTCGCTTGCTGCCCTTGACGCAACAGTGTGTTTGCTATAGGCATGG
GAAACTTGGCGTGTTTCTGTGTACGGTAGCCCTCGAATCCCGAAGGAGGT
AATGTCGTCGTCGTCGCTGTTGTTGCTGCTGCTGCTGCTGCTGCTGCTGC
TGTTGCTGCTGCCGCTGCTGCTGCGGCTGCTGTTGTTGTTGTTGTTGTTG
TTGTTGTTGTTGTTGTTGTTGTTGTTGTTGCTGCTGCTGCTGCTGCTGCT
GCTGCTACTGCTGTTGCTGTTGGTGTTGGTGATGATGTTGTTGTTGTTGC
TCCTGCTGCTGCTGCTGCTGCTGCTGTTGTTGTTGTTGTTGTTGTCACAC
GATAAGAGCCTCCGCTCAGTGCCTTCTAACCTGACGCGAAACGGCACCTA
CCTGCCGCTGGCGCAGACCAACTGCAGATTTACGGCCGCACGCACTACTA
AAGAACTTGCCAGTTCACAACTTCATGCTCAACATTGTACCGCTTACGAG
CCCGGTTAAGAACCCCAAAACCGATATGGATGCCGTTTGTAGCCCACGAG
AGGAACTACCGCAAAAGTCGGAGAGATGGCGCCGGTCGGAGAGATCGCAC
CGGGATGCCTTAAAAAAACTAGTAAACGACATGATGTAATTGCATTTCCG
CACCGGGGTCGGACAGATGGCACCGGTCAGGGAGTTGACACCGGGGTGCG
ACAACAAGCCCGAGGAATTTGTTTTTACACAAACGATCGCACCGGTGCTA
TTTGTAGCCCACGAGAGGAACTAGGAATAATCCCAGCAGCCCTCAGCTGA
CACTAAAGGTTGTTTAGATGCTGGTACGATGTGTCCGTATGGCGACTTAA
AAAAACACAAATATGTGCGGTTGTGCCCTCCCCTAAGTGACCCCATTCGT
ACCGCCGCCTCCACTACCCCCCCTACCGTTTGACAGGTCTGAAACAGGAT
TCTGCGTGGACCCTCCGGACCTGAAGAAGGTGGCGAACGACCAGACTGTC
TTGGAGAGCATCGGGAGGAGATGA
back to top

Coding sequence (CDS) from alignment at Ecto-sp8_S_contig10430:1..3224+

>mRNA_Ecto-sp8_S_contig10430.690.1 ID=mRNA_Ecto-sp8_S_contig10430.690.1|Name=mRNA_Ecto-sp8_S_contig10430.690.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=339bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10430:1..3224+ (Ectocarpus species8 EcLAC_412)
CTCGCCGTAAAGGACTACTGGAAGGTGGATGACAAGACGATCGTTATGGT
CGTCGACAGCGGCGATGACGACAGGAAATCAGGGGCAGTGAACATCCTCA
ACTTCAACGTGGGAGACGGCTTGCGCCTGGGCCTGCCTCCCCAGTTTTGG
CAGAGGTTGCAGAACAAGTACGGCAACAGGTTCTTCGTGAGGGACAACGG
AGTCGACGGGGCCATCATCAGCGCGGTGGATAGCATCACCCTGTGCCTCA
GGTCTGAAACAGGATTCTGCGTGGACCCTCCGGACCTGAAGAAGGTGGCG
AACGACCAGACTGTCTTGGAGAGCATCGGGAGGAGATGA
back to top