mRNA_Ecto-sp8_S_contig10422.678.1 (mRNA) Ectocarpus species8 EcLAC_412

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp8_S_contig10422.678.1
Unique NamemRNA_Ecto-sp8_S_contig10422.678.1
TypemRNA
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Homology
BLAST of mRNA_Ecto-sp8_S_contig10422.678.1 vs. uniprot
Match: D8LR65_ECTSI (N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR65_ECTSI)

HSP 1 Score: 1038 bits (2684), Expect = 0.000e+0
Identity = 550/619 (88.85%), Postives = 563/619 (90.95%), Query Frame = 1
Query:    1 MALVQMNATFSITSVSDEFVAKLVARKAAVGTSFVEMFKEEDRPRVRDALSQSANNGHHDGFVGAATLDGCAAGGGSAADSGVSSEAEELKDFFNKAPIALHWLSATGKILWANDRELEVLGYSREEYIGADIMSFCPDSRDEVLEIFKELGTGNTIRDVPIRFRTKAGKIKHLLIDSNVNYKSDGTINHTRCFIRDDTGRILKECRSEVAATAARQLAEGKERFSSKLLHALTALSGLVASVSKAMKFHDGYVVKPVPTSFSLSSLTGEYRNVETARHEVVVEEVGFDPSLVVIADAVMIRTVLNELVAHADGRSPVSARVVLSVRRIAGGKGGXXXXXXXKFEFRVTDSGKELDESRVEKVFHNYWLGDADVSGDGDGERADLPRLSEELSCYEEAPGLRLNVAFNYVECLDSILRVVSDGSSTTFKFVLDLETSSNGSQGPKREAEEKHHWNKITPSSLPSISPRTSTQSLAGSLYNSDSRHILIVEDNTICQKMCKRIVTGFGHTVDTADNGAIAVEKATAREINIYDLVLMDLRMPVMDGITAAKEIHEKFPELPIVALSAEEGESTKDAALAVMATFISKPTKADRVGKVIQEYARNPLGRTDAGKCLPNLGA 1857
            MALV+MNATFSITSVSDEFVAKLVARKAAVGTSFVEMF+EEDR R                                    G SSEAEELKDFFNKAPIALHWLSATGKILWANDRELEVLGYSREEYIGADIMSFCPDSRD VLEIFKELGTGNTIRDVPIRFRTK G IKHLLIDSNVNYKSDGT NHTRCFIRDDTGRILKECRSEVAATAAR+LAEGKERFSSKLLHALTALSGLVASV+KAMKF DGYVVKPVPTSFSLSSL GEYRN+ETARHEVVV+E+GFD SLVVIADA+MIRTVLNELVAHADGRSPVSARVVLSV RIAGGKGGXXXXXXXKFEFRVTDSG+ELDESRVEKVFHNYWLGDADV G GDGERADLPRLSEELSC EEAPGLRLNVAFNYV+CLDSILRV SDGSSTTF FVLDLETSSNGSQGPKREAEEKHHWNKITPSSLP ISPRTSTQS  GSLYNSDSRHILIVEDNTICQKMCK+IVTG GHTVDTADNGAIAVEKATAREINIYDLVLMDLRMPVMDGITAAKEIH+KFPELPIVALSAEEGESTKDAALAVMATF+SKPTKADRVGKVIQEYARNPLGRTDAGKCLP LGA
Sbjct:    1 MALVEMNATFSITSVSDEFVAKLVARKAAVGTSFVEMFEEEDRTRHXXXXXXXXXXXXXXXXXXXXXX-------------GASSEAEELKDFFNKAPIALHWLSATGKILWANDRELEVLGYSREEYIGADIMSFCPDSRDGVLEIFKELGTGNTIRDVPIRFRTKVGNIKHLLIDSNVNYKSDGTFNHTRCFIRDDTGRILKECRSEVAATAARKLAEGKERFSSKLLHALTALSGLVASVAKAMKFDDGYVVKPVPTSFSLSSLIGEYRNIETARHEVVVQEIGFDASLVVIADAIMIRTVLNELVAHADGRSPVSARVVLSVERIAGGKGGXXXXXXXKFEFRVTDSGEELDESRVEKVFHNYWLGDADVLGGGDGERADLPRLSEELSCDEEAPGLRLNVAFNYVQCLDSILRVASDGSSTTFNFVLDLETSSNGSQGPKREAEEKHHWNKITPSSLPPISPRTSTQSFVGSLYNSDSRHILIVEDNTICQKMCKKIVTGLGHTVDTADNGAIAVEKATAREINIYDLVLMDLRMPVMDGITAAKEIHKKFPELPIVALSAEEGESTKDAALAVMATFMSKPTKADRVGKVIQEYARNPLGRTDAGKCLPKLGA 606          
BLAST of mRNA_Ecto-sp8_S_contig10422.678.1 vs. uniprot
Match: A0A7S1IY81_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1IY81_9EUGL)

HSP 1 Score: 270 bits (690), Expect = 2.370e-77
Identity = 208/593 (35.08%), Postives = 284/593 (47.89%), Query Frame = 1
Query:  265 ELKDFFNKAPIALHWLSATGKILWANDRELEVLGYSREEYIGADIMSFCPDSRDEVLEIFKELGTGNTIRDVPIRFRTKAGKIKHLLIDSNVNYKSDGTINHTRCFIRDDTGRILKECRSEVAATAARQLAEGKERFSSK---------------------------------LLHALTA---LSGLVASVSKAMKFHDGYVVKPVPTSFSLSSLTGEYRNVETARHEVVVEEV--GFDPSLVVIADAVM-----IRTVLNELVAHADGRSPVSARVVLSVRRIAGGKGGXXXXXXXK---FEFRVTDSGKELDESRVEKVFHNYWLGDADVSGDGDGERADLPRLSEELSCYEEAPGLRLNVAFNYVECLDSILRVVSDGSSTTFKFVLDLETSSNGSQGPKREAEEKHHWNKITPSSLPS------------------------------------------ISPRTSTQSLAGSLYNSDSR----HILIVEDNTICQKMCKRIVTGFGHTVDTADNGAIAVEKATAREINIYDLVLMDLRMPVMDGITAAKEIHEKFPEL-PIVALSAEEGESTKDAAL-AVMATFISKP 1761
            E  DFFNKAPIALHWLS TG +LWAN+ EL VLGY+ EEYIG  IM FCPD  + VLEIFK+LG+GNTIRDVP+RFRTK+G IKHLLIDSNVNYK DG+ NHTRCFIRDDT R + E R+E      + + + K++F  K                                 LLHA++    +S L   VS AM F +G V K   T+F L     +  +   + H     +V  G D    V  D+V      +  +LN L+++    + V + V L V      +         +   F F V  +  E+ E ++ +++  YW G     G  D ++  L    + L       GL L+VAFN V+ +   L V S+   TTF F +      + +   + E ++    N+ T SS  +                                          ++  T  + +  SL     +    HIL+V+DNT+CQ + K          D A +GAIAV    A +  +YD VLMDLRMPVMDG  A K + EK     PI+AL+AE   + K+ AL A   + +SKP
Sbjct:  148 EFADFFNKAPIALHWLSDTGHVLWANETELNVLGYTAEEYIGQPIMKFCPDEEELVLEIFKQLGSGNTIRDVPVRFRTKSGDIKHLLIDSNVNYKVDGSFNHTRCFIRDDTARKVNEARAEAREKTYQDVMKQKDQFVQKTFHEVRTPCHMISMALENIRCHLPKDVPEAHEQLLHAVSQTFHISKLAEDVSWAMMFAEGKVPKLEQTNFDLQGAIQDTLSFVRSMHPEKKGKVTLGLDIPSDVPTDSVYGYKGALERILNHLLSNGLKFTQVGS-VTLYVAYSTASEPPADLPSGQEAGVFTFTVKSTSPEIPEDKIHQLWQKYWQG----GGKDDHQQTQLTDSIDGL-------GLGLHVAFNMVQLVGRQLEVRSNADMTTFWFEMPATVWRSTATDGELELDDLESTNRDTTSSSDALTLAKEAAAAVQRASINRRQPELEWIPMMDCLAAKQHVDAAVVANMTEAKQIPKSLRLGQRQGGRAHILVVDDNTVCQSVLKLAFQQMVIKCDVAWHGAIAVTMVEA-DPTLYDAVLMDLRMPVMDGYQATKLLREKVKYTRPIIALTAEHAPAVKEMALEAGCNSMLSKP 727          
BLAST of mRNA_Ecto-sp8_S_contig10422.678.1 vs. uniprot
Match: A0A6U6BI43_GUITH (Hypothetical protein n=3 Tax=Guillardia theta TaxID=55529 RepID=A0A6U6BI43_GUITH)

HSP 1 Score: 259 bits (662), Expect = 5.100e-73
Identity = 189/561 (33.69%), Postives = 279/561 (49.73%), Query Frame = 1
Query:  265 ELKDFFNKAPIALHWLSATGKILWANDRELEVLGYSREEYIGADIMSFCPDSRDEVLEIFKELGTGNTIRDVPIRFRTKAGKIKHLLIDSNVNYKSDGTINHTRCFIRDDTGRILKECRSEVAATAARQLAEGKERFSSKLLHALTA----LSGLVASVSKAMK----------------------------------FHDGYV----VKPVPTSFSLSSLTGEYRNVETARHEVV----------------VEEVGFDPSLV---VIADAVMIRTVLNELVAHADGRSPVSARVVLSVRRIAGGKGGXXXXXXXKFEFRVTDSGKELDESRVEKVFHNYWLGDADVSGDGDGERADLPRLSEELSCYEEAPGLRLNVAFNYVECLDSILRVVSD-GSSTTFKFVLDLETSSNGSQGPKRE----------AEEKHHWNKITPSS-----LPSISPRTSTQSL--AGSLYNSDSR--HILIVEDNTICQKMCKRIVTGFGHTVDTADNGAIAVEKATAREINIYDLVLMDLRMPVMDGITAAKEIHEKFP-ELPIVALSAE 1701
            EL DF NKAPIA+HWLS TG +LWAN+ EL +LGY+ EEYIG  IM+FCPD ++ VLEIFK LG+GNTI+DVP+RFR K GKI+ LLIDSNVN+  DGT  HTRCFIRDDTGR ++E R  V     +QLA+ K+ F  K  H +      L   VA + + MK                                  F  G V    V P     +++ +  E      ++  V                 V +  F P  +   V+ DA  ++ VL+ L+ ++  R      + L+V     G          ++ F VTD+G  ++E +V++ FH YW     V+ DG  ++       ++LS  +   GL LNV+F+ V+CL   L   S  G   TF+F +    +   +    +E          ++    W  +T S      + + +  T+  +L  A  + N   R  H+LIV+DN++C K+ +R+      T + A +G  A         + +D++LMDLRMPVMDG+ A ++I ++   ++PIVA +AE
Sbjct:  157 ELLDFLNKAPIAMHWLSGTGHVLWANETELNILGYTAEEYIGQPIMNFCPDEKELVLEIFKTLGSGNTIKDVPVRFRDKKGKIRDLLIDSNVNWNPDGTFKHTRCFIRDDTGRKIREERLRVTREKEQQLAKAKDIFVRKTFHEIRTPCHILWNHVAILEEQMKEMKLATSFTEAFGVAKLQTNRLLRIANDAADVTMFEMGKVPVLKVNPFSIKETIADICSELEEHGLSQDVVCSVVLGEKEGEAVPFSQVSKAAFKPDKIPDSVMGDARHLKRVLHHLLENSI-RVTSKGSIKLTV-----GFWPASQDMPNRYCFTVTDTGPGIEELKVQECFHKYWT---QVTLDGGAKKE-----FDDLSRDQHGLGLGLNVSFHLVQCLGGQLECSSSLGQGATFRFTVPFPAAQGSNMERSQEQFANLSVGDSSQSVPSWTDVTASGEAMRHIVAEARETAEVNLPPAVGISNELKRRPHVLIVDDNSVCLKVARRMFEDLKCTTEVASHGLQAF-MIVKENPSCFDMILMDLRMPVMDGVEATRKIRQELQSDIPIVAFTAE 702          
BLAST of mRNA_Ecto-sp8_S_contig10422.678.1 vs. uniprot
Match: A0A7S0HSS8_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0HSS8_9CRYP)

HSP 1 Score: 260 bits (665), Expect = 9.460e-73
Identity = 191/561 (34.05%), Postives = 279/561 (49.73%), Query Frame = 1
Query:  265 ELKDFFNKAPIALHWLSATGKILWANDRELEVLGYSREEYIGADIMSFCPDSRDEVLEIFKELGTGNTIRDVPIRFRTKAGKIKHLLIDSNVNYKSDGTINHTRCFIRDDTGRILKECRSEVAATAARQLAEGKERFSSKLLHALTA----LSGLVASVSKAMK-------FHDGYVVKPVPT---------------------------SFSLSSLTG-------EYRNVETARHEVV-------------VEEVGFDPSLV---VIADAVMIRTVLNELVAHADGRSPVSARVVLSVRRIAGGKGGXXXXXXXKFEFRVTDSGKELDESRVEKVFHNYWLGDADVSGDGDGERADLPRLSEELSCYEEAPGLRLNVAFNYVECLDSILRVVSD-GSSTTFKFVLDLETSSNGSQGPKRE----------AEEKHHWNKITPSS-----LPSISPRTSTQSL--AGSLYNSDSR--HILIVEDNTICQKMCKRIVTGFGHTVDTADNGAIAVEKATAREINIYDLVLMDLRMPVMDGITAAKEIHEKFP-ELPIVALSAE 1701
            EL DF NKAPIA+HWLS TG +LWAN+ EL +LGY+ EEYIG  IM+FCPD  + VLEIFK LG+GNTI+DVP+RFR K G I+ LLIDSNVN+  DGT  HTRCFIRDDTGR ++E R  V     +QLA+ K+ F  K  H +      L   VA + + +K       F++ + V    T                           SFS+            E+   +   + VV             V +  F P  +   V+ DA  ++ VL  ++ +A  R      + L+V      +G        ++ F VTD+G  ++E + ++ FHNYW     V+ DG   + D   L+ +    +   GL LNV+F+ V+C+   L   S  G   +F F + L  +   S    +E          ++    W  +T S      + + +  T+   L  A  + N   R  H+LIV+DN++C K+ KR+      T + A +G  A  K      + +D++LMDLRMPVMDG+ A ++I ++   ++PIVA +AE
Sbjct:  159 ELLDFLNKAPIAMHWLSGTGHVLWANETELNILGYTAEEYIGQPIMNFCPDETELVLEIFKTLGSGNTIKDVPVRFRDKKGAIRDLLIDSNVNWNPDGTFKHTRCFIRDDTGRKIREERLRVTREKEQQLAKAKDVFVRKTFHEIRTPCHILWNHVAMLDEQIKEMKVPLGFNETFGVAKQQTNRLLRIANDAADVTMFEMGKVPVLKVNSFSIKETIADICVELEEHGLSQNVEYSVVLGEKEGQAVSFSQVSKANFKPDKIPDAVMGDARHLKRVLYHILENAI-RVTSKGSIKLTVGFWPASQG-----MPNRYSFTVTDTGPGIEELKAQECFHNYWT---KVTLDGAAAKNDFDDLARD----QHGLGLGLNVSFHLVQCMGGQLECSSSLGHGASFSFTVPLPAAEGNSSQQTQEQFASLSMDGSSQTVPSWTDVTHSHEAMRHIVAEARETAEVKLPPAVGISNELKRRPHVLIVDDNSVCLKVAKRMFEDLKCTTEVASHGLQAF-KIIEENPSCFDMILMDLRMPVMDGVEATRKIRQELQCDIPIVAFTAE 705          
BLAST of mRNA_Ecto-sp8_S_contig10422.678.1 vs. uniprot
Match: A0A7S3FI59_9EUKA (Hypothetical protein n=2 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3FI59_9EUKA)

HSP 1 Score: 249 bits (637), Expect = 1.440e-69
Identity = 201/633 (31.75%), Postives = 291/633 (45.97%), Query Frame = 1
Query:  265 ELKDFFNKAPIALHWLSATGKILWANDRELEVLGYSREEYIGADIMSFCPDSRDEVLEIFKELGTGNTIRDVPIRFRTKAGKIKHLLIDSNVNYKSDG----TINHTRCFIRDDTGRILKECRSEVAATAARQLAEGKERFSSKLLHA-----------------------------------------------LTALSGLVASVSKAMKFHDGYVVKPVPTSFSLS----SLTGEYRNVETARHEVVVEEVGFDPSLVVIADAVMIRTVLNELVAHADGRSPVSARVVLSVRRIAGGKGGXXXXXXXKFEFRVTDSGKELDESRVEKVFHNYWLGDADVSG-DGDGERAD---LPRLSEELSCY-----EEAPGLRL--NVAFNYVECLDSILRVVSDGSSTTFKFVLDLETSSN-----------------GSQG--PKREAEEKHHWNKITPSS--------------------------------LPSISPRTSTQSLAGS--LYNSDSRHILIVEDNTICQKMCKRIVTGFGHTVDTADNGAIAVEKATAREINIYDLVLMDLRMPVMDGITAAKEIHEKFP-ELPIVALSAEEGESTKDAALAVMAT-FISKPTKADRVGKVIQEY 1800
            EL DFF  APIALHWLS TG ++WAN  EL+VLGY+ EEYIG  IM FCPD  + VLEIFK LG+GN I+DVP+RFRTKAGKI  LLIDSNV YK D       NHTRCFIRDDTGR ++E R E      ++     + F S+ LH                                                L+ +S L+   S  M+F  G V++ VP S  L     S   E  ++  +   V ++ +G  PS++ + DA ++   L  L+ +A   +P    + LSV                +  F+V D+G  L  S    +F  Y+ G  + +  +G+ ++     + +  E L+        ++ GL    N+ ++ V  L   LR  S    T F FVL  + + N                 G  G  PKR     ++W+ I+  S                                +PS   +T   S   S  L   DS H+L+VED  +C  + + ++   G + D A+NGA AVE     +  +Y LV+MDLRMPVMDG  A + I E+   ++P+VAL+A+E    ++  +A     F +KP K D +  ++ ++
Sbjct:  134 ELIDFFQNAPIALHWLSGTGHVMWANQTELDVLGYTAEEYIGQPIMKFCPDEEELVLEIFKTLGSGNIIKDVPVRFRTKAGKIVPLLIDSNVAYKVDDKGEKAFNHTRCFIRDDTGRRIREARVEAMLKETKRSLTVLDAFVSRTLHLVKTPCHVVQTSMGLLSAHLSALVARMPNSEAQIASETRVLLEGSMAQLSEVSELINDASDVMRFEQGAVLQTVPVSLPLQVLGRSCVDEVLSLVKSGVSVRLD-IGAGPSILSL-DAKVLHRALRHLLRNAAQATPAGGSITLSVTHEEKSSS-WAGNATHRVRFQVADTGCGLPMS-ASNIFQRYYPGPLEATAPNGESKQVSEGAIDKAQENLASSLSFSSGKSTGLXXXXNLTYSLVRALGGELRFDSKFGDTRFWFVLPADGAQNHEPSVSYSAGAASLGGAGGTGAMPKRMPA-SYNWDSISSESDSERRGIASDTSDSEASGGTTRAISSPREFIDVPSSGEKTVLASCLASTGLKACDSPHVLVVEDTEMCATVVRMLLGKLGCSSDHAENGAEAVEMLKTADPGLYSLVIMDLRMPVMDGFDATRAIKEELLLDVPVVALTADETFDIREKCVAASFNDFATKPLKYDALAALLHKH 761          
BLAST of mRNA_Ecto-sp8_S_contig10422.678.1 vs. uniprot
Match: A0A6U6BCV4_GUITH (Hypothetical protein n=2 Tax=Guillardia theta TaxID=55529 RepID=A0A6U6BCV4_GUITH)

HSP 1 Score: 247 bits (630), Expect = 3.150e-69
Identity = 181/539 (33.58%), Postives = 264/539 (48.98%), Query Frame = 1
Query:  265 ELKDFFNKAPIALHWLSATGKILWANDRELEVLGYSREEYIGADIMSFCPDSRDEVLEIFKELGTGNTIRDVPIRFRTKAGKIKHLLIDSNVNYKSDGTINHTRCFIRDDTGRILKECRSEVAATAARQLAEGKERFSSKLLHALTA----LSGLVASVSKAMK----------------------------------FHDGYV----VKPVPTSFSLSSLTGEYRNVETARHEVV----------------VEEVGFDPSLV---VIADAVMIRTVLNELVAHADGRSPVSARVVLSVRRIAGGKGGXXXXXXXKFEFRVTDSGKELDESRVEKVFHNYWLGDADVSGDGDGERADLPRLSEELSCYEEAPGLRLNVAFNYVECLDSILRVVSD-GSSTTFKFVLDLETSSNGSQGPKRE----------AEEKHHWNKITPSS-----LPSISPRTSTQSL--AGSLYNSDSR--HILIVEDNTICQKMCKRIVTGFGHTVDTADNGAIAVEKATAREINIYDLVLMDLRMPVMDGI 1638
            EL DF NKAPIA+HWLS TG +LWAN+ EL +LGY+ EEYIG  IM+FCPD ++ VLEIFK LG+GNTI+DVP+RFR K GKI+ LLIDSNVN+  DGT  HTRCFIRDDTGR ++E R  V     +QLA+ K+ F  K  H +      L   VA + + MK                                  F  G V    V P     +++ +  E      ++  V                 V +  F P  +   V+ DA  ++ VL+ L+ ++  R      + L+V     G          ++ F VTD+G  ++E +V++ FH YW     V+ DG  ++       ++LS  +   GL LNV+F+ V+CL   L   S  G   TF+F +    +   +    +E          ++    W  +T S      + + +  T+  +L  A  + N   R  H+LIV+DN++C K+ +R+      T + A +G  A         + +D++LMDLRMPVMDG+
Sbjct:  157 ELLDFLNKAPIAMHWLSGTGHVLWANETELNILGYTAEEYIGQPIMNFCPDEKELVLEIFKTLGSGNTIKDVPVRFRDKKGKIRDLLIDSNVNWNPDGTFKHTRCFIRDDTGRKIREERLRVTREKEQQLAKAKDIFVRKTFHEIRTPCHILWNHVAILEEQMKEMKLATSFTEAFGVAKLQTNRLLRIANDAADVTMFEMGKVPVLKVNPFSIKETIADICSELEEHGLSQDVVCSVVLGEKEGEAVPFSQVSKAAFKPDKIPDSVMGDARHLKRVLHHLLENSI-RVTSKGSIKLTV-----GFWPASQDMPNRYCFTVTDTGPGIEELKVQECFHKYWT---QVTLDGGAKKE-----FDDLSRDQHGLGLGLNVSFHLVQCLGGQLECSSSLGQGATFRFTVPFPAAQGSNMERSQEQFANLSVGDSSQSVPSWTDVTASGEAMRHIVAEARETAEVNLPPAVGISNELKRRPHVLIVDDNSVCLKVARRMFEDLKCTTEVASHGLQAF-MIVKENPSCFDMILMDLRMPVMDGV 680          
BLAST of mRNA_Ecto-sp8_S_contig10422.678.1 vs. uniprot
Match: A0A7S0I051_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0I051_9EUKA)

HSP 1 Score: 241 bits (614), Expect = 4.200e-66
Identity = 218/737 (29.58%), Postives = 326/737 (44.23%), Query Frame = 1
Query:   19 NATFSITSVSDEFVAKLVARKAAVGTSFVEMFKEEDRPRVRDALSQSANNG-----HHDGFVGAATLDGCAAGGGSAADSGVSSEAE---ELKDFFNKAPIALHWLSATGKILWANDRELEVLGYSREEYIGADIMSFCPDSRDEVLEIFKELGTGNTIRDVPIRFRTKAGKIKHLLIDSNVNYKSDG----TINHTRCFIRDDTGRILKECRSEVAATAARQLAEGKERFSSKLLHA-----------------------------------------------LTALSGLVASVSKAMKFHDGYVVKPVPTSFSLSSLTGEY--RNVETARHEVVVE-EVGFDPSLVVIADAVMIRTVLNELVAHADGRSPVSARVVLSVRRIAG----GKGGXXXXXXXKFEFRVTDSGKELDESRVEKVFHNYWLGDADVSGDGDGERA-----------DLPRLSEELSCY----EEAPGLRLNVAFNYVECLDSILRVVSD--GSSTTFKFVLDLETSS------NGSQGPKREAE---------EKHHWNKI----------------TPSSLPS--ISPRTSTQSLAGSLYNS---------------------DSRHILIVEDNTICQKMCKRIVTGFGHTVDTADNGAIAVEKATAREINIYDLVLMDLRMPVMDGITAAKEIHEKFPELPIVALSAEEGESTKDAALAV-MATFISKPTKADRVGKVIQEYARNPL 1815
            N  F+  +  DE  A L A  +AV +         +R R  + L+ +  +G     H D F+GA+   G     G      +  + E   EL DFF  APIALHWLS TG ++WAN  EL+VLGY+ EEYIG  IM FCPD  + VLEIFK LG+GN I+DVP+RFRTK+GKI  LLIDSNV YK D       NHTRCFIRDDTGR ++E R+E     A +  +  + F S+ LH                                                L  ++ LV   S  M+F  G V++ VPT   L ++      R     +  V V  +    PS+V +   V+ R  L+ L+A+A   +P    + L V    G     +G        +  F V D+G+ L +     +F  Y  G + +S       A           +  RL  E S      ++  G+ LN+ +  V  L   LR  S   G  TTF F +    +S      +   G   EA+          + +W+ I                +PS++ S  +S R     L+   ++                      D  H+L+VED T+C  + + ++   G + D A++G  A+E+    E  ++ LVLMDLRM VMDG +AA  I +   ++PI+A++A+  + T+     +    F +KP  A+ +  +++++  + L
Sbjct:   69 NYEFAEAASKDEGKASLKAAISAVSSGA----SPRERLRNIEMLTLAGESGLPVKTHFDWFIGASEDAGEVTLYGDPCSDEILEQREKDAELIDFFQNAPIALHWLSGTGHVMWANQTELDVLGYTAEEYIGQPIMKFCPDEEELVLEIFKTLGSGNIIKDVPVRFRTKSGKIVPLLIDSNVAYKVDDKGEKAFNHTRCFIRDDTGRRVREARTEALLKEAERSLKMLDAFVSRTLHLIKTPCHIAQQSLGLINARVLELSARLPEAEQRWVDGTRMLLDGSMQQLAEVTDLVTDASDVMRFEQGAVMQTVPTELPLLAVGRAVCGRAATLCKKRVAVTFDFAAGPSVVKLDSRVLHRA-LSHLLANAAEATPAGGTITLRVTHATGYAAPTEGEVGGAPEPRVCFEVHDTGRGLPDGGSSAIFQRYSPGISPLSSPEQNSAATRTPEQEAMAVEKARLGLEASLSFTNAKKGLGIGLNLTYGLVRSLGGELRFRSKDGGGDTTFYFEVPAVDASAPVPAESAECGIAPEAKAAAPGWAQSRRCNWDSIAAAEPKPSANPPAVERSPSAVTSEDLSSRVEDLELSSRAFDEPTSWKKVIEASCVAGTGLKAMDKPHVLVVEDTTMCADVLRVMLKQLGCSSDHAEHGEQALEQLMFSEPGLHTLVLMDLRMNVMDGFSAAMAIKKMGMDVPIIAVTADGSQETRARCKEIGFDDFATKPLLAETMAALLEKHTGHKL 800          
BLAST of mRNA_Ecto-sp8_S_contig10422.678.1 vs. uniprot
Match: A0A8J5X0X6_DIALT (Uncharacterized protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5X0X6_DIALT)

HSP 1 Score: 238 bits (606), Expect = 1.720e-65
Identity = 189/543 (34.81%), Postives = 258/543 (47.51%), Query Frame = 1
Query:  265 ELKDFFNKAPIALHWLSATGKILWANDRELEVLGYSREEYIGADIMSFCPDSRDEVLEIFKELGTGNTIRDVPIRFRTKAGKIKHLLIDSNVNYKSDGTINHTRCFIRDDTGRILKECRSEVAATAARQLAEGKERFSSKLLHALTALSGLVA---------SVSKAMKFHDGYVVKPVPTSFSLSSLTGEY-RNVETARHEVVVEEVGFDPSLVVIADAV------MIRTVLNE------------LVAHADGR-------SPVSARVVLSVRR------IAGGKGGXXXXXXXKFEFRVTDSGKELDESRVEKVFHNYWLGDADVSGDGDGERADLPR--LSEELSCYE--EAPGLRLNVAFNYVECLDSILRVVSDGSSTTFKFVLDLETSSNGSQGPKRE----------------AEEKHHWNKITPSSLPSISPRTSTQSLAGSLYNSDSRHILIVEDNTICQKMCKRIVTGFGHTVDTADNGAIAVEKATAREINIYDLVLMDLRMPVMDGITAAKEIHEKF-PELPIVALSAEEG 1707
            E +DF  +APIA+HWLS TG +LWAND EL +LGYSREEYIG  IM+FCPD  + VLEIFK+LG+GN I+DVP+RFR K G+I  LLIDSNVNY   G  NHTRCFIRDDTGR ++E + E+  + AR+ A+  ++F S+ LH +     L+          S  +A    +G           LSS T    R VE  R     + + FD    ++          + R  +++            L AH D         S V  RV+  + R       AG              F V D+GK L+   V  +F  Y         + DG   D  R  L+++LS     E  G+ L++ ++    L + LR  S   +T F F L    +   + G   E                A     W    P++L    P+ +  +  G         +L+V+D+  C KM    +  FG T DTA++G+ AVE         Y LVLMDLRMPVMDG  A +    +    +PIVA+SAEEG
Sbjct:  128 EFQDFLQRAPIAMHWLSGTGHVLWANDTELRILGYSREEYIGKPIMNFCPDEEEIVLEIFKQLGSGNAIKDVPVRFRAKDGRIVPLLIDSNVNYTDAGDFNHTRCFIRDDTGRRVREAQVEMQLSEARRTAQLFDQFVSRTLHLIRTPCHLLLHNLEELGERSRERAAGGGEGGEGGTPTVGALLSSSTRLVTRIVEMTRD--FTDSLRFDECATLVLHTAPHDVRQLARAAIDDAARLGLCRQGVALSAHVDAGGASVKTDSAVLGRVLRHLLRNAAHATSAGRVTLRVTHGPDGVTFAVVDTGKGLESDDV-NIFQRYRQPAHAALAEADGATLDQHRASLAKDLSLDSGHEGIGIGLSLCYSLCNALGAELRYASRPGATRFWFELPRTRAEADASGAAPELVYNAPEVDTPLEAPTAGSSATWE---PATLARAEPKAAAVAERGIFDARAPMRVLVVDDSPFCLKMVCTRLKRFGFTYDTAEDGSKAVEALRDPPPGGYALVLMDLRMPVMDGYEATRIARTELGATMPIVAVSAEEG 664          
BLAST of mRNA_Ecto-sp8_S_contig10422.678.1 vs. uniprot
Match: A0A7S1VGS2_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VGS2_9STRA)

HSP 1 Score: 213 bits (543), Expect = 1.400e-56
Identity = 182/595 (30.59%), Postives = 270/595 (45.38%), Query Frame = 1
Query:  265 ELKDFFNKAPIALHWLSATGKILWANDRELEVLGYSREEYIGADIMSFCPDSRDEVLEIFKELGTGNTIRDVPIRFRTKAGKIKHLLIDSNVNYKSDGTINHTRCFIRDDTGRILKECRSEVAATAARQLAEGKERFSSKLLH---------------------------------ALTALSG------------------LVASVSKAMKFHDGYVVKPVPTSFSLSSL-TGEYRNVETARH-EVVVEEVGFDPSLVVIADAVMIRTVLNELVAHADGRSPVSARVVLSVRRIAGGKGGXXXXXXXKFEFRVTDSGKEL--------------DESRVEKVFHNYWLGDADVSGDGDGERADLPRLS----EELSCYEEAPGLRLNVAFNY--VECLDSILRVVSDGSSTTFKFVL-----DLETS----SNGSQGPKREAEEKHHWNKITPSSLPSISPRTSTQSLAGSLYNSDSRHILIVEDNTICQKMCKRIVTGFGHTVDTADNGAIAVE--KATAREINIYDLVLMDLRMPVMDGITAAKEIHEKFP-ELPIVALSAEEGESTKDAALAV-MATFISKPTKADRVGKVI 1791
            EL DFF  APIALHWLS  G +LWAN  E++VLGY+ EEYIG  IM FCPD    VLEIFK+LG+GNTIRDVP+RFRTKAGKI H LIDSNV Y ++G   HTRCFIRDDT R +++ ++++     ++  +  + F S+ +H                                 +L  L+                   L+  +S   +   G+ +K       L  L    + N+    H E  +E +G  P  +   D  ++  V+   + H    SP     V +V  + G           K  F +  S + +              DE  +  +F  Y       + D      D+   +    E+         L + +  ++  V  L   LR  +    TTF++ L      LET     S+    P+R +      ++  P++LP         ++       DS  +L+V+D  +C KM   I+     T +TA+NG  AV+  K+ A +   YDLVLMDLRMPVMDG+TA K I +     +P+VAL+ + G   K+   A+    F +KP K + + K++
Sbjct:  150 ELVDFFQNAPIALHWLSGEGIVLWANKTEMDVLGYTPEEYIGQPIMKFCPDEEALVLEIFKQLGSGNTIRDVPVRFRTKAGKIVHFLIDSNVKYDANGQFAHTRCFIRDDTKRKIRDAQAQLLHEETKRSLKMLDNFMSRSMHHVRTPMHILQTTVDIVSHNLIHVQKRAIVANDESLRLLANESLEVLQQARNCVSQSVDLINDISDLARLDQGHELKLNREPVELKELGKTAFANIPIPSHIEASIELLGGGPRYLQ-TDGNLLHKVIRSALDHIT-HSPDEVENVKTVSLVIG-----HNEESNKCVFAIIGSDRRMSSFDLLTHCMSHSDDERGLPSIFQRYTQRFTPGAEDDTVRPYDVASTTRQSVEDAINSHRVSSLHIGLPLSHHLVRALGGDLRYSNRPGLTTFRWALPYKDESLETERIIISSAKAEPQRASSFVLSRDEAKPAALPEAVASCGLDAM-------DSPCVLVVDDVPMCLKMVCNILGKLNCTHETAENGQKAVDLLKSGAGK---YDLVLMDLRMPVMDGLTATKIIKKDLKLGVPVVALTGDAGLDIKEQCDAIGFDEFCNKPMKKNAIKKLV 727          
BLAST of mRNA_Ecto-sp8_S_contig10422.678.1 vs. uniprot
Match: A0A7S2LLX6_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LLX6_9STRA)

HSP 1 Score: 205 bits (522), Expect = 2.630e-53
Identity = 185/638 (29.00%), Postives = 275/638 (43.10%), Query Frame = 1
Query:  265 ELKDFFNKAPIALHWLSATGKILWANDRELEVLGYSREEYIGADIMSFCPDSRDEVLEIFKELGTGNTIRDVPIRFRTKAGKIKHLLIDSNVNYKSDGTINHTRCFIRDDTGRILKECRSEVAATAARQLAEGKERFSSKLLH---------------------------------------ALTALSG---LVASVSKAMKFHDGYVVKPVPTSFSLSSLTGE------YRNVETARHE----VVVEEVGFDPSLVVIADAVMIRTVLNELVAHA----DGRSPVSARVVLSVRRIAGGKGGXXXXXXXKFEFRVTDSGKELD-----ESRVEKV------FHNYWL-GDADVSGDGDGERADLPRLSEEL-SCYEEAPGLRLNVAFNYVECLDSILR-----------------VVSDGSSTTFKFVLDLETSSNGSQGP--------------KREAEEKHHWNKITPSSLPSISPRTSTQSLAGSLYNSDSR-----------------------HILIVEDNTICQKMCKRIVTGFGHTVDTADNGAIAVEKATAREINIYDLVLMDLRMPVMDGITAAKEIHE--KFPELPIVALSAEEGESTKDAALAVMAT-FISKPTKADRVGKVIQEY 1800
            EL DFF  APIA+HWL++ G +LWAN  EL VLGY+ EEYIG  IM+FCPD ++ VLEIF++LG+GN I DVP+RFRTK GKI HLLIDSNV YK DG+  HTRCFIRDDT R +++ R ++      +     + F S+ LH                                       A   +SG   ++A VS   +F +G +++   T F+L ++  E      +R++     +    V V  VG   S  +  D  ++  VL  L+ +A    +    V+ ++  S       +G             + D GK L      E+ +  +       H Y + G+     D D  +     + E L +  +   G+ L V+++ V  L   LR                  + DG       VL  ET       P              KR+ EE   +     S     S  TS      ++  S  +                        +LIVED  IC ++    +     +   A+NG +A++         +DL+LMDLRMPVMDG+ A K I E  K  ++PI+AL+ E+ +  +     +  T F SKP    ++ + I +Y
Sbjct:  172 ELIDFFQNAPIAMHWLNSDGTVLWANQTELNVLGYTAEEYIGQPIMNFCPDEKELVLEIFQQLGSGNAIADVPVRFRTKEGKIVHLLIDSNVAYKKDGSFGHTRCFIRDDTARKIRDARVQLLLDENERSLRMLDNFLSRTLHHIMGPLHALKATCDVVSDRLQTQKFDETERQNSVELLERASETISGSARMIADVSDLARFDEGALLRTKFTPFNLRNVGIEAIEKIQFRDLRMNGGDDGISVSVNLVGGGGSTALNTDRQVLLRVLQHLLENAVREVNPGGSVTLQITSSPPSATNSEGSVLV--------EIMDDGKGLPPGTCLEATISGIGEVNGGSHRYAIIGNRGSQDDPDELQKARAEMEEGLRNLKQNGVGVGLPVSYHLVRMLGGDLRHDAEFSGGTRIWFTLPNKIEDGDEDDQYEVLKTETIPKKGLPPTQISFVQSGQPDIKKRKREEDAEFGNFVSSDS---SAATSNDCDDSTMVTSTPKGKYVDSVPPAAVAKCGVKASMPFSVLIVEDTDICARLLGMQLKKMKCSTQRAENGQVAIDILQKSMPGQFDLILMDLRMPVMDGLEATKLIREELKMGDIPILALTGEKRDDIQSECEGIGFTDFFSKPLPKKKLEETIAKY 798          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig10422.678.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LR65_ECTSI0.000e+088.85N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepI... [more]
A0A7S1IY81_9EUGL2.370e-7735.08Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
A0A6U6BI43_GUITH5.100e-7333.69Hypothetical protein n=3 Tax=Guillardia theta TaxI... [more]
A0A7S0HSS8_9CRYP9.460e-7334.05Hypothetical protein n=1 Tax=Hanusia phi TaxID=303... [more]
A0A7S3FI59_9EUKA1.440e-6931.75Hypothetical protein n=2 Tax=Haptolina ericina Tax... [more]
A0A6U6BCV4_GUITH3.150e-6933.58Hypothetical protein n=2 Tax=Guillardia theta TaxI... [more]
A0A7S0I051_9EUKA4.200e-6629.58Hypothetical protein n=1 Tax=Phaeocystis antarctic... [more]
A0A8J5X0X6_DIALT1.720e-6534.81Uncharacterized protein n=2 Tax=Diacronema lutheri... [more]
A0A7S1VGS2_9STRA1.400e-5630.59Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A7S2LLX6_9STRA2.630e-5329.00Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig10422contigEcto-sp8_S_contig10422:2246..4699 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score1049.3
Seed ortholog evalue7.2e-304
Seed eggNOG ortholog2880.D8LR65
Model size1860
Hectar predicted targeting categoryother localisation
Exons4
EggNOG free text desc.phosphorelay sensor kinase activity
EggNOG OGsCOG0642@1,KOG0519@2759
Cds size1860
COG Functional cat.T
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681143141.0861084-CDS-Ecto-sp8_S_contig10422:2245..24151681143141.0861084-CDS-Ecto-sp8_S_contig10422:2245..2415Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig10422 2246..2415 +
1681143141.1024625-CDS-Ecto-sp8_S_contig10422:2511..30371681143141.1024625-CDS-Ecto-sp8_S_contig10422:2511..3037Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig10422 2512..3037 +
1681143141.1148565-CDS-Ecto-sp8_S_contig10422:3118..42371681143141.1148565-CDS-Ecto-sp8_S_contig10422:3118..4237Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig10422 3119..4237 +
1681143141.12333-CDS-Ecto-sp8_S_contig10422:4654..46991681143141.12333-CDS-Ecto-sp8_S_contig10422:4654..4699Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig10422 4655..4699 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig10422.678.1prot_Ecto-sp8_S_contig10422.678.1Ectocarpus species8 EcLAC_412polypeptideEcto-sp8_S_contig10422 2246..4699 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp8_S_contig10422.678.1

>prot_Ecto-sp8_S_contig10422.678.1 ID=prot_Ecto-sp8_S_contig10422.678.1|Name=mRNA_Ecto-sp8_S_contig10422.678.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=620bp
MALVQMNATFSITSVSDEFVAKLVARKAAVGTSFVEMFKEEDRPRVRDAL
SQSANNGHHDGFVGAATLDGCAAGGGSAADSGVSSEAEELKDFFNKAPIA
LHWLSATGKILWANDRELEVLGYSREEYIGADIMSFCPDSRDEVLEIFKE
LGTGNTIRDVPIRFRTKAGKIKHLLIDSNVNYKSDGTINHTRCFIRDDTG
RILKECRSEVAATAARQLAEGKERFSSKLLHALTALSGLVASVSKAMKFH
DGYVVKPVPTSFSLSSLTGEYRNVETARHEVVVEEVGFDPSLVVIADAVM
IRTVLNELVAHADGRSPVSARVVLSVRRIAGGKGGGGEGGGGKFEFRVTD
SGKELDESRVEKVFHNYWLGDADVSGDGDGERADLPRLSEELSCYEEAPG
LRLNVAFNYVECLDSILRVVSDGSSTTFKFVLDLETSSNGSQGPKREAEE
KHHWNKITPSSLPSISPRTSTQSLAGSLYNSDSRHILIVEDNTICQKMCK
RIVTGFGHTVDTADNGAIAVEKATAREINIYDLVLMDLRMPVMDGITAAK
EIHEKFPELPIVALSAEEGESTKDAALAVMATFISKPTKADRVGKVIQEY
ARNPLGRTDAGKCLPNLGA*
back to top

mRNA from alignment at Ecto-sp8_S_contig10422:2246..4699+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp8_S_contig10422.678.1 ID=mRNA_Ecto-sp8_S_contig10422.678.1|Name=mRNA_Ecto-sp8_S_contig10422.678.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=2454bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10422:2246..4699+ (Ectocarpus species8 EcLAC_412)
ATGGCTTTGGTCCAGATGAACGCGACGTTTTCGATAACGTCGGTGAGCGA TGAGTTCGTGGCGAAGCTGGTGGCCAGAAAGGCCGCGGTGGGGACGAGCT TCGTGGAGATGTTCAAGGAGGAGGACAGGCCAAGGGTGAGAGACGCCCTC TCTCAATCGGCGAACAACGGGTCCATGGGGGCGGTCAACGGGGCGCGGAT GACGGCTTGCGGGTCGGGCCCGAACGGCTTTCCCCGCACCGTCACGTGCA ACTGGACTCTGCTCAGGCACCACGACGGGTTCGTCGGTGCCGCTACTCTG GACGGGTGCGCAGCCGGCGGCGGTTCTGCCGCTGACAGCGGCGTCTCGTC GGAGGCCGAAGAGCTCAAGGACTTCTTCAACAAGGCTCCCATCGCGCTGC ACTGGCTGTCCGCGACCGGCAAGATTCTCTGGGCGAACGACCGCGAGCTC GAGGTCCTCGGCTACTCCAGGGAGGAGTACATCGGGGCGGACATCATGAG CTTCTGCCCGGACTCCCGCGACGAGGTTTTGGAGATCTTCAAGGAGCTGG GGACGGGCAACACCATCCGCGACGTGCCAATTCGGTTCCGCACGAAGGCC GGAAAGATCAAGCACCTGCTGATCGACTCGAACGTGAACTACAAGTCGGA CGGGACAATCAACCACACGCGGTGCTTCATCCGGGACGACACGGGCCGCA TCCTGAAGGAGTGCCGCTCCGAGGTGGCAGCGACTGCCGCCAGGCAGCTC GCGGAGGGAAAGGAGCGGTTCTCGTCCAAGCTCCTCCACGCGGTGAGGAC CCCGCTCCACGTCTTGTCCATGTGCCTCTCCGACGGCGGCGCCACCTCGC TCGACGCCATTGTGGCCAGCCAGCTGACCGCGCTCTCGGGGCTGGTAGCC AGCGTCTCCAAGGCCATGAAGTTCCACGACGGGTACGTGGTCAAGCCCGT TCCGACCTCTTTCAGCCTGTCTTCCCTGACTGGGGAGTACAGGAACGTCG AGACCGCGAGGCACGAGGTCGTCGTCGAAGAGGTCGGCTTCGATCCGTCT CTGGTCGTGATCGCCGACGCGGTCATGATCAGGACGGTGCTCAACGAGCT CGTCGCGCACGCCGACGGCAGGAGCCCTGTCTCCGCGAGGGTCGTCCTGT CCGTCCGGCGCATCGCGGGGGGCAAAGGGGGCGGCGGGGAAGGAGGAGGA GGAAAATTCGAGTTCAGGGTGACAGACAGCGGAAAGGAACTCGACGAGTC CCGTGTCGAAAAGGTTTTCCACAACTACTGGCTGGGAGACGCGGACGTGT CAGGGGATGGCGACGGCGAACGTGCCGATCTTCCGAGGCTGAGCGAGGAG CTATCCTGTTACGAAGAAGCACCGGGTCTGAGACTGAACGTAGCCTTCAA CTATGTGGAGTGCCTGGACTCCATCTTGCGGGTCGTTTCCGACGGCTCGT CGACCACGTTCAAGTTCGTTCTTGACCTCGAGACCAGCTCCAACGGTTCT CAGGGCCCCAAGAGGGAAGCGGAGGAGAAACACCACTGGAACAAGATCAC CCCCTCAAGTCTCCCTTCCATCTCACCGAGGACTTCCACGCAGAGCTTGG CGGGAAGCCTCTACAACTCAGACAGCAGGCACATCCTGATCGTCGAGGAC AACACGATCTGCCAGAAGATGTGCAAGAGAATCGTCACGGGCTTCGGTCA CACCGTAGACACGGCCGACAACGGCGCGATCGCGGTGGAGAAGGCGACGG CGAGGGAGATCAACATCTACGACTTGGTCCTCATGGATCTCCGCATGCCC GTGATGGACGGCATAACTGCCGCGAAGGAGATTCACGAGAAGTTCCCCGA GCTTCCCATAGTCGCGCTCTCGGCTGAGGAGGGCGAGTCGACGAAAGACG CCGCCCTAGCCGTTATGGCCACATTCATAAGCAAGCCCACGAAAGCAGAC CGGGTAGGGAAGGTCATCCAAGAGTACGCTAGGAATCCGCTGGTGAGGCT GCTGGCTGTACTTTAGCAACCCCAATGCATCGTCTTAGACGGCGTCGTCA GTGAACATGTTTCTGGCCGGTGGCAAGCTTGAAAGATGTTTGTGTAGTCA CGTTGAAACTATCGCAGGACAAGAGTACAAGAGGAAATGACATGCGTTCA ATCATACTGGGGGGTGGAACCGAAAATTTAGAGTAAACTCGTGTTCTCTT TAGTCGCGATCTTGAAGGATGTCTGCGCCGTCGTGCTGAAAACCACCACG AAAAGGTGCACGAGAAGAAGTGACAGTTCAAACATTCCCCCGTTGGGGAG AACGCACCGAAAATTGGCCTTGACTCTGAGTAAAATTCATGCTTGCTTGT GGTGCGTCGTGGACTGAACGTCGCCTTATGTCGCTCGCGTGGGATGCGTT GGACCACAGGGACGCACGGATGCTGGAAAATGTCTACCGAACCTTGGTGC GTGA
back to top

Coding sequence (CDS) from alignment at Ecto-sp8_S_contig10422:2246..4699+

>mRNA_Ecto-sp8_S_contig10422.678.1 ID=mRNA_Ecto-sp8_S_contig10422.678.1|Name=mRNA_Ecto-sp8_S_contig10422.678.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=1860bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10422:2246..4699+ (Ectocarpus species8 EcLAC_412)
ATGGCTTTGGTCCAGATGAACGCGACGTTTTCGATAACGTCGGTGAGCGA
TGAGTTCGTGGCGAAGCTGGTGGCCAGAAAGGCCGCGGTGGGGACGAGCT
TCGTGGAGATGTTCAAGGAGGAGGACAGGCCAAGGGTGAGAGACGCCCTC
TCTCAATCGGCGAACAACGGGCACCACGACGGGTTCGTCGGTGCCGCTAC
TCTGGACGGGTGCGCAGCCGGCGGCGGTTCTGCCGCTGACAGCGGCGTCT
CGTCGGAGGCCGAAGAGCTCAAGGACTTCTTCAACAAGGCTCCCATCGCG
CTGCACTGGCTGTCCGCGACCGGCAAGATTCTCTGGGCGAACGACCGCGA
GCTCGAGGTCCTCGGCTACTCCAGGGAGGAGTACATCGGGGCGGACATCA
TGAGCTTCTGCCCGGACTCCCGCGACGAGGTTTTGGAGATCTTCAAGGAG
CTGGGGACGGGCAACACCATCCGCGACGTGCCAATTCGGTTCCGCACGAA
GGCCGGAAAGATCAAGCACCTGCTGATCGACTCGAACGTGAACTACAAGT
CGGACGGGACAATCAACCACACGCGGTGCTTCATCCGGGACGACACGGGC
CGCATCCTGAAGGAGTGCCGCTCCGAGGTGGCAGCGACTGCCGCCAGGCA
GCTCGCGGAGGGAAAGGAGCGGTTCTCGTCCAAGCTCCTCCACGCGCTGA
CCGCGCTCTCGGGGCTGGTAGCCAGCGTCTCCAAGGCCATGAAGTTCCAC
GACGGGTACGTGGTCAAGCCCGTTCCGACCTCTTTCAGCCTGTCTTCCCT
GACTGGGGAGTACAGGAACGTCGAGACCGCGAGGCACGAGGTCGTCGTCG
AAGAGGTCGGCTTCGATCCGTCTCTGGTCGTGATCGCCGACGCGGTCATG
ATCAGGACGGTGCTCAACGAGCTCGTCGCGCACGCCGACGGCAGGAGCCC
TGTCTCCGCGAGGGTCGTCCTGTCCGTCCGGCGCATCGCGGGGGGCAAAG
GGGGCGGCGGGGAAGGAGGAGGAGGAAAATTCGAGTTCAGGGTGACAGAC
AGCGGAAAGGAACTCGACGAGTCCCGTGTCGAAAAGGTTTTCCACAACTA
CTGGCTGGGAGACGCGGACGTGTCAGGGGATGGCGACGGCGAACGTGCCG
ATCTTCCGAGGCTGAGCGAGGAGCTATCCTGTTACGAAGAAGCACCGGGT
CTGAGACTGAACGTAGCCTTCAACTATGTGGAGTGCCTGGACTCCATCTT
GCGGGTCGTTTCCGACGGCTCGTCGACCACGTTCAAGTTCGTTCTTGACC
TCGAGACCAGCTCCAACGGTTCTCAGGGCCCCAAGAGGGAAGCGGAGGAG
AAACACCACTGGAACAAGATCACCCCCTCAAGTCTCCCTTCCATCTCACC
GAGGACTTCCACGCAGAGCTTGGCGGGAAGCCTCTACAACTCAGACAGCA
GGCACATCCTGATCGTCGAGGACAACACGATCTGCCAGAAGATGTGCAAG
AGAATCGTCACGGGCTTCGGTCACACCGTAGACACGGCCGACAACGGCGC
GATCGCGGTGGAGAAGGCGACGGCGAGGGAGATCAACATCTACGACTTGG
TCCTCATGGATCTCCGCATGCCCGTGATGGACGGCATAACTGCCGCGAAG
GAGATTCACGAGAAGTTCCCCGAGCTTCCCATAGTCGCGCTCTCGGCTGA
GGAGGGCGAGTCGACGAAAGACGCCGCCCTAGCCGTTATGGCCACATTCA
TAAGCAAGCCCACGAAAGCAGACCGGGTAGGGAAGGTCATCCAAGAGTAC
GCTAGGAATCCGCTGGGACGCACGGATGCTGGAAAATGTCTACCGAACCT
TGGTGCGTGA
back to top