mRNA_Ecto-sp8_S_contig10417.673.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig10417.673.1 vs. uniprot
Match: A0A6H5KS33_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KS33_9PHAE) HSP 1 Score: 302 bits (774), Expect = 4.490e-98 Identity = 151/154 (98.05%), Postives = 152/154 (98.70%), Query Frame = 2
Query: 86 MSLLRRNTVECLQTLARGCKNPKKPQHSKRSQIGLYGGKDIGFGNTISFSHKKNRRTWKPNVQKKALYSETLDEWIKFNLTTHALRCVDRAGGIDKYLLKTPDEWLNSVQGSKAKRQIEEALAARGDSSGELHAGEEEGGADAGLRAEGGRQSS 547
MSLLRRNTV CLQTLARGCKNPKKPQHSKRSQIGLY GKDIGFGNTISFSHKKNRRTWKPNVQKKALYSETLDEWIKFNLTTHALRCVDRAGGIDKYLLKTPDEWLNSVQGSKAKR+IEEALAARGDSSGELHAGEEEGGADAGLRAEGGRQSS
Sbjct: 1 MSLLRRNTVGCLQTLARGCKNPKKPQHSKRSQIGLYAGKDIGFGNTISFSHKKNRRTWKPNVQKKALYSETLDEWIKFNLTTHALRCVDRAGGIDKYLLKTPDEWLNSVQGSKAKRKIEEALAARGDSSGELHAGEEEGGADAGLRAEGGRQSS 154
BLAST of mRNA_Ecto-sp8_S_contig10417.673.1 vs. uniprot
Match: A0A7S3ZX50_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZX50_9STRA) HSP 1 Score: 139 bits (351), Expect = 1.980e-35 Identity = 66/98 (67.35%), Postives = 79/98 (80.61%), Query Frame = 2
Query: 167 SKRSQIGLYGGKDIGFGNTISFSHKKNRRTWKPNVQKKALYSETLDEWIKFNLTTHALRCVDRAGGIDKYLLKTPDEWLNSVQGSKAKRQIEEALAAR 460
S RS+ G+Y GKDI FGN ISFSH+K RRT+KPN Q+K L+SETL W++FNLTTHALRC+DRAGGID YLLKTPD L S+ G+ A+R IE A A+R
Sbjct: 60 SNRSKRGIYAGKDIRFGNNISFSHRKTRRTFKPNAQRKRLWSETLGCWLRFNLTTHALRCIDRAGGIDAYLLKTPDAKLGSIAGANARRMIEAARASR 157
BLAST of mRNA_Ecto-sp8_S_contig10417.673.1 vs. uniprot
Match: A0A7S2C450_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C450_9STRA) HSP 1 Score: 132 bits (331), Expect = 7.790e-33 Identity = 61/99 (61.62%), Postives = 77/99 (77.78%), Query Frame = 2
Query: 167 SKRSQIGLYGGKDIGFGNTISFSHKKNRRTWKPNVQKKALYSETLDEWIKFNLTTHALRCVDRAGGIDKYLLKTPDEWLNSVQGSKAKRQIEEALAARG 463
S R+ GLYGGKD+GFGN +S S +K RR WKPNVQKK L+SE+L +W+KFN+TT A+RCVD+AGG+D YLL D + S+QG AKR+IE ALA +G
Sbjct: 42 SGRAARGLYGGKDVGFGNMVSHSERKTRRMWKPNVQKKRLWSESLGDWVKFNVTTQAMRCVDKAGGLDNYLLGLKDGKIGSIQGLAAKRRIEAALAEKG 140
BLAST of mRNA_Ecto-sp8_S_contig10417.673.1 vs. uniprot
Match: A0A7S2RZD4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RZD4_9STRA) HSP 1 Score: 124 bits (312), Expect = 3.750e-30 Identity = 66/127 (51.97%), Postives = 86/127 (67.72%), Query Frame = 2
Query: 167 SKRSQIGLYGGKDIGFGNTISFSHKKNRRTWKPNVQKKALYSETLDEWIKFNLTTHALRCVDRAGGIDKYLLKTPDEWLNSVQGSKAKRQIEEALAARGDSSGELHAGEEEGGADAGLRAEGGRQSS 547
S R+ GL+G KDI FGN +S S +K RR+WKPN Q K L+SETL+E++KF TT+ L+C+D+ GG+D YLL+TPD+ LNS+ G AKR+IEE L R G G E+ + A EGGR SS
Sbjct: 18 SGRALRGLFGNKDIRFGNKVSHSERKTRRSWKPNAQNKRLWSETLEEFLKFKTTTYVLKCIDKVGGLDNYLLRTPDKKLNSITGLAAKRRIEEVLQQRQTLEGR---GLEDASSTAASSNEGGRISS 141
BLAST of mRNA_Ecto-sp8_S_contig10417.673.1 vs. uniprot
Match: A0A7S2HHC9_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HHC9_9STRA) HSP 1 Score: 119 bits (299), Expect = 1.160e-28 Identity = 56/98 (57.14%), Postives = 74/98 (75.51%), Query Frame = 2
Query: 167 SKRSQIGLYGGKDIGFGNTISFSHKKNRRTWKPNVQKKALYSETLDEWIKFNLTTHALRCVDRAGGIDKYLLKTPDEWLNSVQGSKAKRQIEEALAAR 460
S R+ GL+GGKD+ FGN +S S +K RR WKPNVQ+K L+SETL ++++FN+T HA+RCVD+AGG+D YLL PD+ L S QG AK +I E L A+
Sbjct: 16 SGRALRGLFGGKDVRFGNKVSHSERKTRRMWKPNVQRKKLWSETLQDYLRFNMTVHAMRCVDKAGGVDNYLLAIPDKDLKSDQGLAAKCKIIEKLQAK 113
BLAST of mRNA_Ecto-sp8_S_contig10417.673.1 vs. uniprot
Match: A0A835YSL8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSL8_9STRA) HSP 1 Score: 113 bits (282), Expect = 9.490e-26 Identity = 68/146 (46.58%), Postives = 86/146 (58.90%), Query Frame = 2
Query: 95 LRRNTVECLQTLARGCKNPKKPQHSKRSQIGLYGGKDIGFGNTISFSHKKNRRTWKPNVQKKALYSETLDEWIKFNLTTHALRCVDRAGGIDKYLLKTPDEWLNSVQGSKAKRQIEEALAARGDSSGELHAGEEEGGADAGLRAEG 532
+R++ V+ L+ R P +S RSQ G+Y GKD+ FGN FS KK+RR W PNVQ K L+SE L E I +TT ALR VD+AGG+D YLL T D+ L S Q S ++ EA+ GD E E GADAGL +G
Sbjct: 5 VRQSAVKFLEGFTRASSKPNL--YSNRSQRGMYAGKDVRFGNKTCFSAKKSRRKWLPNVQSKRLWSELLREHIPLKVTTAALRGVDKAGGLDNYLLYTTDDRLRSSQVSAINGRVVEAIEEAGDEDDEGGREGEGEGADAGLHVQG 148
BLAST of mRNA_Ecto-sp8_S_contig10417.673.1 vs. uniprot
Match: A0A7S3K4M7_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K4M7_9STRA) HSP 1 Score: 112 bits (280), Expect = 9.590e-26 Identity = 49/95 (51.58%), Postives = 70/95 (73.68%), Query Frame = 2
Query: 155 KPQHSKRSQIGLYGGKDIGFGNTISFSHKKNRRTWKPNVQKKALYSETLDEWIKFNLTTHALRCVDRAGGIDKYLLKTPDEWLNSVQGSKAKRQI 439
K S R++ GLY KD+ GN++SFS +K RR WKPNVQ K +S+ L W++F +TTHA++C+D+ GGIDKY+L+TP+ LNS+ G+ AKR +
Sbjct: 33 KRHGSNRAKRGLYHLKDVRSGNSVSFSERKTRRKWKPNVQTKKFWSQILCCWLRFKVTTHAIKCIDKKGGIDKYILETPESKLNSIAGNNAKRML 127
BLAST of mRNA_Ecto-sp8_S_contig10417.673.1 vs. uniprot
Match: G4YF32_PHYSP (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=G4YF32_PHYSP) HSP 1 Score: 110 bits (275), Expect = 4.340e-25 Identity = 58/119 (48.74%), Postives = 76/119 (63.87%), Query Frame = 2
Query: 104 NTVECLQTLARGCKNPKKPQH-SKRSQIGLYGGKDIGFGNTISFSHKKNRRTWKPNVQKKALYSETLDEWIKFNLTTHALRCVDRAGGIDKYLLKTPDEWLNSVQGSKAKRQIEEALAA 457
N++ L+ R K+ QH S R+Q GL+ G+D FGN +SFS ++ RR WK N Q K LYSE LDE + N+TTH LRCVD+ GG+D YLL DE V+G K + ++ EALAA
Sbjct: 4 NSMRFLEAFTRAAKH----QHVSGRAQRGLFAGRDKAFGNNVSFSKRRTRRAWKVNHQWKTLYSEALDEKVGLNVTTHTLRCVDKCGGLDNYLLSIKDERELGVKGLKTRDRVREALAA 118
BLAST of mRNA_Ecto-sp8_S_contig10417.673.1 vs. uniprot
Match: F0WX23_9STRA (Uncharacterized protein AlNc14C340G10780 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WX23_9STRA) HSP 1 Score: 110 bits (274), Expect = 7.300e-25 Identity = 57/116 (49.14%), Postives = 76/116 (65.52%), Query Frame = 2
Query: 116 CLQTLARGCKNPKKPQH-SKRSQIGLYGGKDIGFGNTISFSHKKNRRTWKPNVQKKALYSETLDEWIKFNLTTHALRCVDRAGGIDKYLLKTPDEWLNSVQGSKAKRQIEEALAAR 460
C++ L + KK +H S R++ GL+ G+D GFGN +S S ++ RR+WK N Q K LYSE LDE I N+TTH LRC+D+ GG+D YL DE V+G KAK +I EAL A+
Sbjct: 9 CMRFLQAFTRGSKKHEHISGRARRGLFAGRDKGFGNNVSHSKRRTRRSWKVNHQWKHLYSEALDEMIGLNVTTHTLRCIDKIGGLDNYLQSISDEQELGVKGLKAKNRIVEALKAQ 124
BLAST of mRNA_Ecto-sp8_S_contig10417.673.1 vs. uniprot
Match: D3BM00_POLPP (Uncharacterized protein n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3BM00_POLPP) HSP 1 Score: 108 bits (271), Expect = 2.010e-24 Identity = 55/122 (45.08%), Postives = 79/122 (64.75%), Query Frame = 2
Query: 86 MSLLRRNTVECLQTLARGCKNPKKPQHSKRSQIGLYGGKDIGFGNTISFSHKKNRRTWKPNVQKKALYSETLDEWIKFNLTTHALRCVDRAGGIDKYLLKTPDEWLNSVQGSKAKRQIEEAL 451
MS++ N + + T R NP KR+Q LYGG+ I +GN+ISFSHKK RRTWKPNVQ K +S+ L++ IK ++TT+ +RC+D+AG D Y++ T D+ L+S GS K ++ L
Sbjct: 1 MSMMN-NVINSMFT--RASNNPHSANILKRAQRALYGGRTIQYGNSISFSHKKTRRTWKPNVQSKTYHSDILNQDIKVDVTTYTMRCIDKAGNFDNYIINTKDKDLDSKLGSDLKVLLKSTL 119 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig10417.673.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig10417.673.1 >prot_Ecto-sp8_S_contig10417.673.1 ID=prot_Ecto-sp8_S_contig10417.673.1|Name=mRNA_Ecto-sp8_S_contig10417.673.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=155bp MSLLRRNTVECLQTLARGCKNPKKPQHSKRSQIGLYGGKDIGFGNTISFSback to top mRNA from alignment at Ecto-sp8_S_contig10417:971..4596+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig10417.673.1 ID=mRNA_Ecto-sp8_S_contig10417.673.1|Name=mRNA_Ecto-sp8_S_contig10417.673.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=3626bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10417:971..4596+ (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig10417:971..4596+ >mRNA_Ecto-sp8_S_contig10417.673.1 ID=mRNA_Ecto-sp8_S_contig10417.673.1|Name=mRNA_Ecto-sp8_S_contig10417.673.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=465bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10417:971..4596+ (Ectocarpus species8 EcLAC_412)back to top |