mRNA_Ecto-sp8_S_contig104069.663.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig104069.663.1 vs. uniprot
Match: UPI0015937923 (hypothetical protein n=1 Tax=Parasphingorhabdus flavimaris TaxID=266812 RepID=UPI0015937923) HSP 1 Score: 92.8 bits (229), Expect = 1.610e-22 Identity = 51/54 (94.44%), Postives = 53/54 (98.15%), Query Frame = 1
Query: 1 MRYAIALSSLIISSLAIPAAFAQSSGTTVAKDGSCPTGFKSSGSSCKSSSGKVA 162
MRYAIALSSLIISSLA+PAAFAQSSGTTVAKDGSCPTGFKSSGS+CKS SGKVA
Sbjct: 1 MRYAIALSSLIISSLAVPAAFAQSSGTTVAKDGSCPTGFKSSGSACKSGSGKVA 54
BLAST of mRNA_Ecto-sp8_S_contig104069.663.1 vs. uniprot
Match: A0A127MCQ0_9SPHN (Uncharacterized protein n=1 Tax=Sphingorhabdus sp. M41 TaxID=1806885 RepID=A0A127MCQ0_9SPHN) HSP 1 Score: 84.7 bits (208), Expect = 2.470e-19 Identity = 47/54 (87.04%), Postives = 50/54 (92.59%), Query Frame = 1
Query: 1 MRYAIALSSLIISSLAIPAAFAQSSGTTVAKDGSCPTGFKSSGSSCKSSSGKVA 162
MRYAIALSSL+ISS IP AFAQSS TTVAK+GSCP+GFKSSGSSCKSSSGKVA
Sbjct: 1 MRYAIALSSLVISSFVIPTAFAQSSDTTVAKNGSCPSGFKSSGSSCKSSSGKVA 54
BLAST of mRNA_Ecto-sp8_S_contig104069.663.1 vs. uniprot
Match: A0A2G2D6X7_9SPHN (Uncharacterized protein n=1 Tax=Sphingopyxis sp. TaxID=1908224 RepID=A0A2G2D6X7_9SPHN) HSP 1 Score: 78.6 bits (192), Expect = 6.590e-17 Identity = 45/53 (84.91%), Postives = 47/53 (88.68%), Query Frame = 1
Query: 1 MRYAIALSSLIISSLAIPAAFAQSSGTTVAKDGSCPTGFKSSGSSCKSSSGKV 159
MR IALSSLI+SSLAIP AFAQSS TVAKDGSCPTGFKSSGSSC+SSSG V
Sbjct: 1 MRAVIALSSLILSSLAIPVAFAQSSSMTVAKDGSCPTGFKSSGSSCQSSSGAV 53
BLAST of mRNA_Ecto-sp8_S_contig104069.663.1 vs. uniprot
Match: UPI000225EE18 (hypothetical protein n=1 Tax=Citromicrobium sp. JLT1363 TaxID=517722 RepID=UPI000225EE18) HSP 1 Score: 61.2 bits (147), Expect = 4.250e-10 Identity = 34/54 (62.96%), Postives = 42/54 (77.78%), Query Frame = 1
Query: 1 MRYAIALSSLIISSLAIPAAFAQSSGTTVAKDGSCPTGFKSSGSSCKSSSGKVA 162
MR I S+ +++ PAA+AQSSGT VAKDG+CPTGF++SGS C SSSGKVA
Sbjct: 1 MRIFIVASAALLAFGTAPAAYAQSSGTEVAKDGACPTGFRASGSKCVSSSGKVA 54
BLAST of mRNA_Ecto-sp8_S_contig104069.663.1 vs. uniprot
Match: UPI001AA07C36 (hypothetical protein n=1 Tax=Parasphingorhabdus sp. JHSY0214 TaxID=2806553 RepID=UPI001AA07C36) HSP 1 Score: 60.5 bits (145), Expect = 8.710e-10 Identity = 33/49 (67.35%), Postives = 39/49 (79.59%), Query Frame = 1
Query: 13 IALSSLIISSLAIPAAFAQSSGTTVAKDGSCPTGFKSSGSSCKSSSGKV 159
IA +++ S L P AFAQSS T+V KDGSCPTGFK+SG +CKSSSGKV
Sbjct: 7 IAAAAIATSGLYAPLAFAQSSSTSVTKDGSCPTGFKASGGNCKSSSGKV 55
BLAST of mRNA_Ecto-sp8_S_contig104069.663.1 vs. uniprot
Match: A0A6I4V2W0_9SPHN (Uncharacterized protein n=1 Tax=Pontixanthobacter luteolus TaxID=295089 RepID=A0A6I4V2W0_9SPHN) HSP 1 Score: 54.3 bits (129), Expect = 2.060e-7 Identity = 30/50 (60.00%), Postives = 37/50 (74.00%), Query Frame = 1
Query: 1 MRYAIALSSLIISSLAIPAAFAQSSGTTVAKDGSCPTGFKSSGSSCKSSS 150
MR+ L ++ +S PAA+AQSS + V KDGSCP GFK+SGSSCKSSS
Sbjct: 1 MRFTAILGAIALSVGTAPAAYAQSSSSEVTKDGSCPKGFKASGSSCKSSS 50
BLAST of mRNA_Ecto-sp8_S_contig104069.663.1 vs. uniprot
Match: A0A845AXK2_9SPHN (Uncharacterized protein n=1 Tax=Parerythrobacter jejuensis TaxID=795812 RepID=A0A845AXK2_9SPHN) HSP 1 Score: 52.0 bits (123), Expect = 1.670e-6 Identity = 36/55 (65.45%), Postives = 40/55 (72.73%), Query Frame = 1
Query: 1 MRYAIALSSLIISSLAIPA-AFAQSSGTTVAKDGSCPTGFKSSGSSCKSSSGKVA 162
MR A S ++ A PA AFAQSS + V +DGSCPTGFKSSGSSCKSS GKVA
Sbjct: 1 MRIAFLTLSAALALSAGPAPAFAQSSSSEVERDGSCPTGFKSSGSSCKSS-GKVA 54
BLAST of mRNA_Ecto-sp8_S_contig104069.663.1 vs. uniprot
Match: A0A1C7DB99_9SPHN (Uncharacterized protein n=1 Tax=Paraurantiacibacter namhicola TaxID=645517 RepID=A0A1C7DB99_9SPHN) HSP 1 Score: 49.3 bits (116), Expect = 1.850e-5 Identity = 25/37 (67.57%), Postives = 29/37 (78.38%), Query Frame = 1
Query: 52 PAAFAQSSGTTVAKDGSCPTGFKSSGSSCKSSSGKVA 162
P A AQSS T V +DGSCPTGFK+SGS C S++G VA
Sbjct: 18 PVAMAQSSSTEVPRDGSCPTGFKASGSDCVSNNGSVA 54 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig104069.663.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig104069.663.1 >prot_Ecto-sp8_S_contig104069.663.1 ID=prot_Ecto-sp8_S_contig104069.663.1|Name=mRNA_Ecto-sp8_S_contig104069.663.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=101bp MRYAIALSSLIISSLAIPAAFAQSSGTTVAKDGSCPTGFKSSGSSCKSSSback to top mRNA from alignment at Ecto-sp8_S_contig104069:159..461+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig104069.663.1 ID=mRNA_Ecto-sp8_S_contig104069.663.1|Name=mRNA_Ecto-sp8_S_contig104069.663.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=303bp|location=Sequence derived from alignment at Ecto-sp8_S_contig104069:159..461+ (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig104069:159..461+ >mRNA_Ecto-sp8_S_contig104069.663.1 ID=mRNA_Ecto-sp8_S_contig104069.663.1|Name=mRNA_Ecto-sp8_S_contig104069.663.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=303bp|location=Sequence derived from alignment at Ecto-sp8_S_contig104069:159..461+ (Ectocarpus species8 EcLAC_412)back to top |