mRNA_Ecto-sp8_S_contig10406.660.1 (mRNA) Ectocarpus species8 EcLAC_412
|
Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig10406.660.1 vs. uniprot
Match: D8LGJ4_ECTSI (Phospholipid-transporting ATPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGJ4_ECTSI) HSP 1 Score: 758 bits (1957), Expect = 3.510e-262 Identity = 382/384 (99.48%), Postives = 382/384 (99.48%), Query Frame = 1
Query: 1 SCRLLEPEMTLIKLKEKEGDPQSVANQLRALMTHFNRLVEDDGLVKRFWGHVKQSPLGLLRRSRRHGGGGGLSAPSSTGDRNRTGGVATMEEDGAATLPTPLLEQPQGAPPLSELTADSLALVLDGPSLAHVLGNPEAERMLLTLGSMCKSVIACRVSPAQKRLIVRLVKRGVVPTPVTLSIGDGANDVGMIQEAQIGVGISGKEGRQAVNNSDFAIAQFRFLKRLMLVHGHWDYRRVCKVILYSFYKNFVLTFCLFYFCFYTGFSGQSLFESLVYSGFNFFTAMPILLIGIFDKDVGNQTATECHKLYAVGRAGMDLNLRTMTKWVCQAILDSLTVFFLPLAAYRDATTVWAERGYGDGLYVFGTTVYAGLIMAMMMKVFNMT 1152
SCRLLEPEMTLIKLKEKEGDPQSV NQLRALMTHFNRLVEDDGLVKRFWGHVKQSPLGLLRRSRRHGGGGGLSAPSS GDRNRTGGVATMEEDGAATLPTPLLEQPQGAPPLSELTADSLALVLDGPSLAHVLGNPEAERMLLTLGSMCKSVIACRVSPAQKRLIVRLVKRGVVPTPVTLSIGDGANDVGMIQEAQIGVGISGKEGRQAVNNSDFAIAQFRFLKRLMLVHGHWDYRRVCKVILYSFYKNFVLTFCLFYFCFYTGFSGQSLFESLVYSGFNFFTAMPILLIGIFDKDVGNQTATECHKLYAVGRAGMDLNLRTMTKWVCQAILDSLTVFFLPLAAYRDATTVWAERGYGDGLYVFGTTVYAGLIMAMMMKVFNMT
Sbjct: 726 SCRLLEPEMTLIKLKEKEGDPQSVVNQLRALMTHFNRLVEDDGLVKRFWGHVKQSPLGLLRRSRRHGGGGGLSAPSSMGDRNRTGGVATMEEDGAATLPTPLLEQPQGAPPLSELTADSLALVLDGPSLAHVLGNPEAERMLLTLGSMCKSVIACRVSPAQKRLIVRLVKRGVVPTPVTLSIGDGANDVGMIQEAQIGVGISGKEGRQAVNNSDFAIAQFRFLKRLMLVHGHWDYRRVCKVILYSFYKNFVLTFCLFYFCFYTGFSGQSLFESLVYSGFNFFTAMPILLIGIFDKDVGNQTATECHKLYAVGRAGMDLNLRTMTKWVCQAILDSLTVFFLPLAAYRDATTVWAERGYGDGLYVFGTTVYAGLIMAMMMKVFNMT 1109
BLAST of mRNA_Ecto-sp8_S_contig10406.660.1 vs. uniprot
Match: A0A836CHZ9_9STRA (Phospholipid-transporting ATPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHZ9_9STRA) HSP 1 Score: 442 bits (1136), Expect = 1.150e-139 Identity = 230/393 (58.52%), Postives = 291/393 (74.05%), Query Frame = 1
Query: 1 SCRLLEPEMTLIKLKEKEGDPQSVANQLRALMTHFNRLVEDDGLVKRFWGHVKQS--PLGLLRRSRRHGGGGGLSAPSSTGDRNRTGGVATMEEDGAATLPTPLLEQPQG-------APPLSELTADSLALVLDGPSLAHVLGNPEAERMLLTLGSMCKSVIACRVSPAQKRLIVRLVKRGVVPTPVTLSIGDGANDVGMIQEAQIGVGISGKEGRQAVNNSDFAIAQFRFLKRLMLVHGHWDYRRVCKVILYSFYKNFVLTFCLFYFCFYTGFSGQSLFESLVYSGFNFFTAMPILLIGIFDKDVGNQTATECHKLYAVGRAGMDLNLRTMTKWVCQAILDSLTVFFLPLAAYRDATTVWAERGYGDGLYVFGTTVYAGLIMAMMMKVFNMT 1152
SCRLLEP MTLIKLKE++GDP SV QL+ L HF RL EDD L + WG V +S P G + + GG G+ G GGVA AATLP PLLE+P AP +S +D+LA+V+DG SL H+LG+ + + + L + MC+SV+ACRVSPAQKRL+VRLVK+ V P P+TL+IGDGANDVGMIQEAQ+GVG+SGKEGRQAVNN+DFAIAQFRFL+RL+LVHGHWDYRR+CKVILYSFYKN LTF LFY+CFY+G SGQSL+ESLVYSG+NFF A+PIL +G+FD+DV ++ A +LY VG +DLN+R W+ QA+LDS+ +FF+P+AAY + V++ G+ DGLYVFGTTVY+ L++ M++KV +T
Sbjct: 826 SCRLLEPHMTLIKLKERDGDPASVDRQLQGLCAHFGRLAEDDSLFQNQWGSVLRSVVPKGAKPAASK-GGKRGVGEGDVEGG---LGGVAA-----AATLPEPLLERPPARSGAESEAPMIS---SDALAMVVDGASLVHILGHDDKQALFLRVACMCRSVVACRVSPAQKRLLVRLVKKNVRPAPITLAIGDGANDVGMIQEAQVGVGMSGKEGRQAVNNADFAIAQFRFLRRLLLVHGHWDYRRLCKVILYSFYKNIALTFILFYYCFYSGLSGQSLYESLVYSGYNFFLALPILCVGLFDRDVNDRAAAAAPRLYRVGTHNLDLNVRVTVLWMAQAVLDSVLIFFIPVAAYGGSEAVFSAAGHHDGLYVFGTTVYSALVLCMLLKVVTIT 1206
BLAST of mRNA_Ecto-sp8_S_contig10406.660.1 vs. uniprot
Match: A0A7S4D8B9_HETAK (Phospholipid-transporting ATPase (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D8B9_HETAK) HSP 1 Score: 384 bits (985), Expect = 2.400e-125 Identity = 197/383 (51.44%), Postives = 252/383 (65.80%), Query Frame = 1
Query: 1 SCRLLEPEMTLIKLKEKEG----DPQSVANQLRALMTHFNRLVEDDGLVKRFWGHVKQSPLGLLRRSRRHGGGGGLSAPSSTGDRNRTGGVATMEEDGAATLPTPLLEQPQGAPPLSELTADSLALVLDGPSLAHVLGNPEAERMLLTLGSMCKSVIACRVSPAQKRLIVRLVKRGVVPTPVTLSIGDGANDVGMIQEAQIGVGISGKEGRQAVNNSDFAIAQFRFLKRLMLVHGHWDYRRVCKVILYSFYKNFVLTFCLFYFCFYTGFSGQSLFESLVYSGFNFFTAMPILLIGIFDKDVGNQTATECHKLYAVGRAGMDLNLRTMTKWVCQAILDSLTVFFLPLAAYRDATTVWAERGYGDGLYVFGTTVYAGLIMAMMMK 1137
SCRLL P+M +IKL EG DP++ A Q+R L HF RL ED +W V G R+R G M+ + +LP PLL P AP +LT+D LALV++G +L H++G E ER L + +C+SVIACRVSP QKRL+VRLVK GV P+TL++GDGANDVGMIQEAQ+GVGISGKEGRQAVN +DFAIAQFRFL+RL+ +HG WDYRR CKV+LYSFYKN VL F LFYF + G+SGQSL++S VY+G+NFF MPIL++G+FD+DV +TA LY GR MD++L+ M W+ Q +++S+ +FF+ +W GY DGL+VFGTTVY+ LI M+MK
Sbjct: 60 SCRLLHPDMVMIKLAGGEGGSGGDPEATARQVRLLYRHFARLTEDQASFGHWWQKVASRLPGAAARAR---------------------GETEMDGEALPSLPAPLLSAPPQAPAFEDLTSDHLALVVEGSALLHIMGRAELERKFLRVARLCRSVIACRVSPEQKRLLVRLVKLGVEGAPITLAVGDGANDVGMIQEAQVGVGISGKEGRQAVNTADFAIAQFRFLRRLLFLHGRWDYRRTCKVVLYSFYKNMVLAFILFYFTCFCGWSGQSLYDSWVYAGYNFFLGMPILIVGLFDRDVSEKTALGYPSLYMSGRENMDMSLKIMGGWLFQGLVESICLFFIAYGCAHIPVMIWGSDGYDDGLWVFGTTVYSCLIFGMLMK 421
BLAST of mRNA_Ecto-sp8_S_contig10406.660.1 vs. uniprot
Match: A0A6H5JDL8_9PHAE (PhoLip_ATPase_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDL8_9PHAE) HSP 1 Score: 372 bits (956), Expect = 5.020e-124 Identity = 182/186 (97.85%), Postives = 185/186 (99.46%), Query Frame = 1
Query: 595 VGISGKEGRQAVNNSDFAIAQFRFLKRLMLVHGHWDYRRVCKVILYSFYKNFVLTFCLFYFCFYTGFSGQSLFESLVYSGFNFFTAMPILLIGIFDKDVGNQTATECHKLYAVGRAGMDLNLRTMTKWVCQAILDSLTVFFLPLAAYRDATTVWAERGYGDGLYVFGTTVYAGLIMAMMMKVFNMT 1152
+GISGKEGRQAVNNSDFAIAQFRFLKRLMLVHGHWDYRRVCKVILYSFYKNFVLTFCLFYFCFYTGFSGQSLFESLVYSGFNFF AMPILLIGIFDKDVGNQTATECHKLYAVGRAGMDLNLRTMTKWVCQAILDSLT+FFLPLAAYRDA+TVWAERGYGDGLYVFGTTVYAGLIMAMMMKVFNMT
Sbjct: 1 MGISGKEGRQAVNNSDFAIAQFRFLKRLMLVHGHWDYRRVCKVILYSFYKNFVLTFCLFYFCFYTGFSGQSLFESLVYSGFNFFLAMPILLIGIFDKDVGNQTATECHKLYAVGRAGMDLNLRTMTKWVCQAILDSLTIFFLPLAAYRDASTVWAERGYGDGLYVFGTTVYAGLIMAMMMKVFNMT 186
BLAST of mRNA_Ecto-sp8_S_contig10406.660.1 vs. uniprot
Match: W7TGI1_9STRA (Phospholipid-transporting ATPase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TGI1_9STRA) HSP 1 Score: 365 bits (938), Expect = 1.000e-112 Identity = 207/389 (53.21%), Postives = 262/389 (67.35%), Query Frame = 1
Query: 1 SCRLLEPEMTLIKLKEKEGDPQSVANQLRALMTHFNRLVE-----DDGLVKRFWGHVKQSPLGLLRRSRRHGGGGGLSAPSSTGDRNRTGGVATMEEDGAATLPTPLLEQPQGAPPLSELTADSLALVLDGPSLAHVLGNPEAERMLLTLGSMCKSVIACRVSPAQKRLIVRLVKRGVVPTPVTLSIGDGANDVGMIQEAQIGVGISGKEGRQAVNNSDFAIAQFRFLKRLMLVHGHWDYRRVCKVILYSFYKNFVLTFCLFYFCFYTGFSGQSLFESLVYSGFNFFTAMPILLIGIFDKDVGNQTATECHKLYAVGRAGMDLNLRTMTKWVCQAILDSLTVFFLPLAAYRDATTVWAERGYGDGLYVFGTTVYAGLIMAMMMKVFNMT 1152
SCRLL MTL+KLK+ GDP ++ L+ L+ + LVE D L +R + Q RR G G + G+ + V +E++ P E AP ELT+D++ALV+DGP+LAHVLG+PE E M L L S+C+SV+ACRVSPAQKRL+VRLVK GV P P+TLSIGDGANDV MIQEAQIGVGISGKEG+QAVN++DFAIAQFR+L+RL+L+HG +DYRR+ KVILYSFYKN VLTF LFY+ F+TGFSGQSLF LVYS FNF AMPI+ +G FD D+ Q +Y GR MDLN+R M +W QA+LDS+ +F L A R A +W G GLY+FGTTVY+ +++A+ +KV +T
Sbjct: 716 SCRLLSSRMTLLKLKDT-GDPATIRRHLKKLLNALDWLVERERKLGDTLGRRIMERMTQ----CARR-----GPGDFRSSWQAGEED----VKILEDEDLKVCFRPQNE----APHFKELTSDTVALVVDGPALAHVLGDPEYEAMFLRLSSICRSVVACRVSPAQKRLVVRLVKAGVKPMPITLSIGDGANDVAMIQEAQIGVGISGKEGQQAVNSADFAIAQFRYLRRLLLIHGRYDYRRMSKVILYSFYKNMVLTFILFYYLFFTGFSGQSLFNDLVYSAFNFLCAMPIICVGFFDIDIFPQHVLAWKWVYMSGRDHMDLNIRLMVQWFVQALLDSVLIFCFSLFAARSAHEIWGWDGDVAGLYLFGTTVYSVMLLAVSLKVATIT 1086
BLAST of mRNA_Ecto-sp8_S_contig10406.660.1 vs. uniprot
Match: A0A6H5JI04_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI04_9PHAE) HSP 1 Score: 311 bits (798), Expect = 3.330e-103 Identity = 166/190 (87.37%), Postives = 171/190 (90.00%), Query Frame = 1
Query: 25 MTLIKLKEKEGDPQSVANQLRALMTHFNRLVEDDGLVKRFWGHVKQSPLGLLRRSRRHGGGGG--LSAPSSTGDRNRTGGVATMEEDGAATLPTPLLEQPQGAPPLSELTADSLALVLDGPSLAHVLGNPEAERMLLTLGSMCKSVIACRVSPAQKRLIVRLVKRGVVPTPVTLSIGDGANDVGMIQEAQ 588
MTLIKLKE+EGDPQSV NQLRALM +F RLVED+GLVKRFWGHVKQ+PLGLLRRSR LSAPSS DRNRT GVATMEEDGAATLPTPLLEQPQGAP +SELTADSLALVLDGPSLAHVLGN EAERMLLTLGSMC SVIACRVSPAQKRLIVRLVKRGVVP PVTLSIGDGANDVGMIQEAQ
Sbjct: 1 MTLIKLKEQEGDPQSVVNQLRALMEYFKRLVEDEGLVKRFWGHVKQNPLGLLRRSRXXXXXXXXXLSAPSSMRDRNRTEGVATMEEDGAATLPTPLLEQPQGAPQISELTADSLALVLDGPSLAHVLGNAEAERMLLTLGSMCTSVIACRVSPAQKRLIVRLVKRGVVPKPVTLSIGDGANDVGMIQEAQ 190
BLAST of mRNA_Ecto-sp8_S_contig10406.660.1 vs. uniprot
Match: A0A7S2CW43_9STRA (Phospholipid-transporting ATPase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CW43_9STRA) HSP 1 Score: 289 bits (739), Expect = 4.140e-88 Identity = 148/262 (56.49%), Postives = 191/262 (72.90%), Query Frame = 1
Query: 358 LALVLDGPSLAHVLGNPEAERMLLTLGSMCKSVIACRVSPAQKRLIVRLVKRGVVPTPVTLSIGDGANDVGMIQEAQIGVGISGKEGRQAVNNSDFAIAQFRFLKRLMLVHGHWDYRRVCKVILYSFYKNFVLTFCLFYFCFYTGFSGQSLF--ESLVYSGFNFFTAMPILLIGIFDKDVGNQTATECHKLYAVGRAGMDLNLRTMTKWVCQAILDSLTVFFLPLAAYRDATTVWAERGYGDGLYVFGTTVYAGLIMAMMMK 1137
LAL++DGPSL ++ + + LL L C++VIACRVSPAQK+LIV++VK G+ P+P+TLSIGDGANDV MIQEAQIGVGISGKEG QAVN+SDFAIAQFRFLK L+LVHG W+YRR+ VI+YSFYKN VL LF + Y+GFSGQSL+ +S YSG+NFF +P +G FDKDV +T+ + HKLY VG DLN+ + K Q+I D+L +F++P AAY +T W G GL +FG V+ +++ MM+K
Sbjct: 304 LALIVDGPSLTVIMAKEDTKEKLLKLACCCRAVIACRVSPAQKQLIVKMVKTGLSPSPITLSIGDGANDVPMIQEAQIGVGISGKEGLQAVNSSDFAIAQFRFLKPLLLVHGRWNYRRISSVIIYSFYKNTVLVCVLFLYTCYSGFSGQSLYGGDSWCYSGYNFFLGLPPFFLGFFDKDVQRETSLQYHKLYEVGLLKQDLNITMLAKAFLQSIFDALVIFYIPYAAY---STFWEADGTLSGLDIFGNAVFLIMVLCMMVK 562
BLAST of mRNA_Ecto-sp8_S_contig10406.660.1 vs. uniprot
Match: A0A7S2CMU9_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CMU9_9STRA) HSP 1 Score: 283 bits (724), Expect = 7.540e-88 Identity = 149/272 (54.78%), Postives = 194/272 (71.32%), Query Frame = 1
Query: 328 PPLSELTADSLALVLDGPSLAHVLGNPEAERMLLTLGSMCKSVIACRVSPAQKRLIVRLVKRGVVPTPVTLSIGDGANDVGMIQEAQIGVGISGKEGRQAVNNSDFAIAQFRFLKRLMLVHGHWDYRRVCKVILYSFYKNFVLTFCLFYFCFYTGFSGQSLF--ESLVYSGFNFFTAMPILLIGIFDKDVGNQTATECHKLYAVGRAGMDLNLRTMTKWVCQAILDSLTVFFLPLAAYRDATTVWAERGYGDGLYVFGTTVYAGLIMAMMMK 1137
P LSE++ + LALV+DGP+L ++ + EA LL LG CK+V+ACRVSPAQK+LIV++VK G+ P+TLSIGDGANDV MIQEAQIGVGISGKEGRQAVN+SDFAIAQFRFLKRL+LVHG W+Y R KVI+YSFYKN VL + LF+F +GFSGQSL+ +S YSGFNFF +P L+GIF+ DV TA + HKLY G G +LN++ + + A +D+ ++F Y + + G GL +G +A L+MAM+++
Sbjct: 27 PVLSEMSTEHLALVVDGPALLEIMDDEEARHQLLQLGCFCKAVLACRVSPAQKQLIVKMVKDGLPTKPITLSIGDGANDVPMIQEAQIGVGISGKEGRQAVNSSDFAIAQFRFLKRLLLVHGRWNYLRTAKVIIYSFYKNTVLVWLLFFFACESGFSGQSLYGGDSWCYSGFNFFLGLPPFLVGIFETDVKADTAMKYHKLYLSGLQGKELNIKKIIVAMFWATMDACMIYFSVRNYYGSTISSQNKDGLMVGLQTYGNVCFAALVMAMLIR 298
BLAST of mRNA_Ecto-sp8_S_contig10406.660.1 vs. uniprot
Match: A0A812HXA9_9DINO (ALA10 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812HXA9_9DINO) HSP 1 Score: 291 bits (745), Expect = 1.030e-87 Identity = 147/276 (53.26%), Postives = 195/276 (70.65%), Query Frame = 1
Query: 331 PLSELTAD------SLALVLDGPSLAHVLGNPEAERMLLTLGSMCKSVIACRVSPAQKRLIVRLVKRGVVPTPVTLSIGDGANDVGMIQEAQIGVGISGKEGRQAVNNSDFAIAQFRFLKRLMLVHGHWDYRRVCKVILYSFYKNFVLTFCLFYFCFYTGFSGQSLFESLVYSGFNFFTAMPILLIGIFDKDVGNQTATECHKLYAVGRAGMDLNLRTMTKWVCQAILDSLTVFFLPLAAYRDATTVWAERGYGDGLYVFGTTVYAGLIMAMMMKV 1140
PLS L A ++A+V+ G +L H++G+PE E+ L ++CK+VIACRVSP QK ++ +VK G+ P P+TL+IGDGANDV MIQEA++GVGISGKEG QAVN SDFAIAQFRFLK L+LVHG W Y R+CKV+LYSFYKN V+T LF F + GFSG S FESLVYSG+NFF +PI+++G+FD+D+ +T ++Y G M+LN+++M W+ A ++ VFFLP A Y A W+ G DGL V G T + L++AM +KV
Sbjct: 407 PLSPLVAPDVQVRTNMAVVVTGAALYHIIGHPEREKKFLITATLCKAVIACRVSPGQKANVIGMVKDGIKPRPMTLAIGDGANDVNMIQEAEVGVGISGKEGLQAVNASDFAIAQFRFLKPLLLVHGRWSYVRMCKVVLYSFYKNVVITLTLFCFNSFAGFSGTSFFESLVYSGYNFFLGLPIIMVGLFDRDLSKRTVLSRPEVYMSGLYHMNLNIKSMIGWLMHAFAYAMIVFFLPWATYAPAGPSWSPDGVVDGLSVAGQTTFTCLVLAMQLKV 682
BLAST of mRNA_Ecto-sp8_S_contig10406.660.1 vs. uniprot
Match: W7TQX5_9STRA (Phospholipid-transporting ATPase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TQX5_9STRA) HSP 1 Score: 294 bits (752), Expect = 1.060e-85 Identity = 191/473 (40.38%), Postives = 250/473 (52.85%), Query Frame = 1
Query: 1 SCRLLEPEMTLIKLKEKEGD-----PQSVAN-------QLRALMTHFNRLVEDDGLVKRFWG-------HVKQSPLGLL------RRSRR-----------HGGGGGLSAPSSTGDRNRTGGVATMEEDGAATLPTPLLEQP------QGAPPLSELTADSLALVLDGPSLAHVLGNPEAERMLLTLGSMCKSVIACRVSPAQKRLIVRLVKRGVV-PTPVTLSIGDGANDVGMIQEAQIGVGISGKEGRQAVNNSDFAIAQFRFLKRLMLVHGHWDYRRVCKVILYSFYKNFVLTFCLFYFCFYTGFSGQSLFESLVYSGFNFFTAMPILLIGIFDKDVGNQT---------------------------------------------------ATECHKLYAVGRAGMDLNLRTMTKWVCQAILDSLTVFFLPLAAYRDATTVWAERGYGDGLYVFGTTVYAGLIMAMMMK 1137
SCRLL EM LIK+ + +G+ P++ A QLR L+THF L+EDD LV G +V PL + RSRR + G G A + D V EEDG E+ + PL ++ D LAL++DGPSL + G+ E ER+LL + +CKSV+ACRVSPAQKR+++RLVK+GV P P+TL+IGDGANDV MIQEAQ+GVGISG+EGRQAVN++DFAI+QFRF++ L+L HG W YRR KVILYSFYKN VLTF LF + + TGFSGQSLFE VY+ +NF AMP + G+FD+D+ +T +Y GR +DLN+ M W+ QAILDS+ +F A V + G D LY G + G+++ M+ K
Sbjct: 871 SCRLLHSEMVLIKVVDHKGEGSEKTPRTEAESTAALRQQLRKLVTHFECLIEDDTLVDGLTGSSRGGHGNVGVKPLWRMWQKRRVERSRRRQRPSFYTKLFNSGAGVEEAGTGVNDMLLEPLVEDGEEDGGEEYHVGGWEENFVRHSVTSSNPLQDVQTDHLALIVDGPSLGRIFGDWEMERLLLRVARLCKSVVACRVSPAQKRMLIRLVKKGVKHPKPITLAIGDGANDVAMIQEAQVGVGISGREGRQAVNSADFAISQFRFIEPLLLKHGRWSYRRTSKVILYSFYKNIVLTFVLFAYTWLTGFSGQSLFEDYVYTSYNFMLAMPPICFGLFDRDISVETIKGGAREDAGRGPDKSDDNISEEPSLNDENLHTTLGFATSQKSFPTTSVRTGNSFRWVYMSGRENLDLNMGQMALWLVQAILDSVLIFGFSFGAMNTPHQVLSASGGVDDLYTLGLITFTGMLLGMLGK 1343 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig10406.660.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig10406.660.1 >prot_Ecto-sp8_S_contig10406.660.1 ID=prot_Ecto-sp8_S_contig10406.660.1|Name=mRNA_Ecto-sp8_S_contig10406.660.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=376bp MTLIKLKEKEGDPQSVANQLRALMTHFNRLVEDDGLVKRFWGHVKQSPLGback to top mRNA from alignment at Ecto-sp8_S_contig10406:1245..6856+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig10406.660.1 ID=mRNA_Ecto-sp8_S_contig10406.660.1|Name=mRNA_Ecto-sp8_S_contig10406.660.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=5612bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10406:1245..6856+ (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig10406:1245..6856+ >mRNA_Ecto-sp8_S_contig10406.660.1 ID=mRNA_Ecto-sp8_S_contig10406.660.1|Name=mRNA_Ecto-sp8_S_contig10406.660.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=1128bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10406:1245..6856+ (Ectocarpus species8 EcLAC_412)back to top |