mRNA_Ecto-sp8_S_contig104029.653.1 (mRNA) Ectocarpus species8 EcLAC_412

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp8_S_contig104029.653.1
Unique NamemRNA_Ecto-sp8_S_contig104029.653.1
TypemRNA
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Homology
BLAST of mRNA_Ecto-sp8_S_contig104029.653.1 vs. uniprot
Match: D7FWK0_ECTSI (AB hydrolase-1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWK0_ECTSI)

HSP 1 Score: 191 bits (485), Expect = 7.770e-57
Identity = 104/155 (67.10%), Postives = 105/155 (67.74%), Query Frame = 1
Query:    1 KVLAFINEVIGEPAYVAGNSLGGYIAANLAANYPRAVLGLALMNATPFWAFRKP------NGG-------------------------------------------SPVEGSGDWLGWDGTLPAPAGLFRFGAWYFDRMRDPRTVKSMLGAVYSN 318
            +VLAFINEVIGEPAYVAGNSLGGYIAANLAANYPRAVLGLALMNATPFWAFRKP      NGG                                           SPVEG GDWLGWDGTLPAPAGLFRFGAWYFDRMRDPRTVKSMLGAVYSN
Sbjct:  148 QVLAFINEVIGEPAYVAGNSLGGYIAANLAANYPRAVLGLALMNATPFWAFRKPSANAALNGGDVTDPYPSTDLSATRDIXXXXXXXXXXXXXXXXVPGSPATKGESPVEGRGDWLGWDGTLPAPAGLFRFGAWYFDRMRDPRTVKSMLGAVYSN 302          
BLAST of mRNA_Ecto-sp8_S_contig104029.653.1 vs. uniprot
Match: A0A6H5J6H3_9PHAE (AB hydrolase-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6H3_9PHAE)

HSP 1 Score: 191 bits (485), Expect = 8.550e-56
Identity = 104/155 (67.10%), Postives = 105/155 (67.74%), Query Frame = 1
Query:    1 KVLAFINEVIGEPAYVAGNSLGGYIAANLAANYPRAVLGLALMNATPFWAFRKP------NGG-------------------------------------------SPVEGSGDWLGWDGTLPAPAGLFRFGAWYFDRMRDPRTVKSMLGAVYSN 318
            +VLAFINEVIGEPAYVAGNSLGGYIAANLAANYPRAVLGLALMNATPFWAFRKP      NGG                                           SPVEGSGDWLGWDGTLPAPAGLFRFGAWYFDRMRDPRTVKSMLGAVY N
Sbjct:  278 QVLAFINEVIGEPAYVAGNSLGGYIAANLAANYPRAVLGLALMNATPFWAFRKPSANAASNGGDVTDPYPPTDLSATRDVSTGSATXXXXXXXSEIVPGNPATKGESPVEGSGDWLGWDGTLPAPAGLFRFGAWYFDRMRDPRTVKSMLGAVYHN 432          
BLAST of mRNA_Ecto-sp8_S_contig104029.653.1 vs. uniprot
Match: A0A7S2UZQ6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZQ6_9STRA)

HSP 1 Score: 102 bits (255), Expect = 1.410e-23
Identity = 55/106 (51.89%), Postives = 68/106 (64.15%), Query Frame = 1
Query:    1 KVLAFINEVIGEPAYVAGNSLGGYIAANLAANYPRAVLGLALMNATPFWAFRKPNGGSP--VEGSGDWLGWDGTLPAPAGLFRFGAWYFDRMRDPRTVKSMLGAVY 312
            +++ FI+EVI  P  + GNSLGG I   +AA  P  V  L L+NATPFWAF    G  P  VE     L WDG LPAP  L++FG++YFD +R  +TVKSMLG VY
Sbjct:  177 QIIDFIDEVIQSPVNLCGNSLGGLIGTIVAAKRPDLVQSLTLLNATPFWAFLPVKGSMPGWVE---KLLPWDGELPAPGPLYKFGSFYFDNLRSSKTVKSMLGLVY 279          
BLAST of mRNA_Ecto-sp8_S_contig104029.653.1 vs. uniprot
Match: A0A7S0S6Z6_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0S6Z6_9CHLO)

HSP 1 Score: 101 bits (252), Expect = 5.590e-23
Identity = 55/107 (51.40%), Postives = 72/107 (67.29%), Query Frame = 1
Query:    1 KVLAFINEVIGEPAYVAGNSLGGYIAANLAANYPRAVLGLALMNATPFWAFRKPNGGSPVEGSGDWLGWDGTLPAPAGLFR-FGAWYFDRMRDPRTVKSMLGAVYSN 318
            ++  F+ +VI  PAYVAGNSLGGY+A NLAA Y  +V GL L+N+TPFW+F+ P   S  +G    LG DGT+P P GL R     ++DR+R   TV SMLG VY++
Sbjct:  212 QMAEFVRDVIRAPAYVAGNSLGGYVATNLAATYGGSVRGLVLINSTPFWSFKPP--ASRPQGVWGLLGLDGTVPVPQGLRRTIEVLWWDRLRSRDTVASMLGLVYAH 316          
BLAST of mRNA_Ecto-sp8_S_contig104029.653.1 vs. uniprot
Match: A0A836BNK1_9CHLO (AB hydrolase-1 domain-containing protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A836BNK1_9CHLO)

HSP 1 Score: 98.2 bits (243), Expect = 4.090e-22
Identity = 54/106 (50.94%), Postives = 69/106 (65.09%), Query Frame = 1
Query:   13 FINEVIGEPAYVAGNSLGGYIAANLAANYPRAVLGLALMNATPFWAFRKPNGGSPVEGSGDWLGWD----GTLPAPAGLFR-FGAWYFDRMRDPRTVKSMLGAVYS 315
            F+ +V+GEPAYVAGNSLGGY+A  LAA  P  V G+ L+NATPFWAFR P  G+P      W   D    G++P P GL R    +++D +RDP T+ SML  VY+
Sbjct:   62 FLEQVVGEPAYVAGNSLGGYLAVMLAARRPDLVRGVVLLNATPFWAFR-PARGTPGSEGALWRALDNAVDGSVPVPEGLKRTIERYWWDTLRDPTTISSMLKLVYA 166          
BLAST of mRNA_Ecto-sp8_S_contig104029.653.1 vs. uniprot
Match: A0A8J5XDH3_DIALT (AB hydrolase-1 domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XDH3_DIALT)

HSP 1 Score: 95.1 bits (235), Expect = 3.440e-21
Identity = 51/104 (49.04%), Postives = 66/104 (63.46%), Query Frame = 1
Query:   10 AFINEVI-GEPAYVAGNSLGGYIAANLAANYPRAVLGLALMNATPFWAFRKPNGGSPVEGSGDWLGWDGTLPAPAGLFRFGAWYFDRMRDPRTVKSMLGAVYSN 318
            AF++ V+ G PA + GNSLGGYIA  LA   P  V GL L+N TP W+F  P   +   G+    GWD TLPAP   F  G+ +F  +RDPRT+ +MLGAVY++
Sbjct:  145 AFLDSVLDGRPAILVGNSLGGYIAVQLALKRPELVRGLVLLNPTPIWSFAPP---ARDVGALRPFGWDATLPAPRVPFLIGSTWFHTLRDPRTIATMLGAVYAD 245          
BLAST of mRNA_Ecto-sp8_S_contig104029.653.1 vs. uniprot
Match: A0A836BCE3_9CHLO (AB hydrolase-1 domain-containing protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A836BCE3_9CHLO)

HSP 1 Score: 95.9 bits (237), Expect = 4.850e-21
Identity = 53/111 (47.75%), Postives = 69/111 (62.16%), Query Frame = 1
Query:   10 AFINEVIGEPAYVAGNSLGGYIAANLAANYPRAVLGLALMNATPFWAFRKPNGGSPVEGSGDWLGW-------DGTLPAPAGLFR-FGAWYFDRMRDPRTVKSMLGAVYSN 318
            AF+ +V+GEPAYVAGNSLGGY+A  LAA  P  V GL L+NATPFWAFR P   +       WL W       DG++P P  L R    +++D +R P T+ +ML  VY++
Sbjct:  119 AFLEQVVGEPAYVAGNSLGGYLAVMLAARRPDLVKGLTLLNATPFWAFRPPRTSAQAR---SWL-WRALDRAVDGSVPVPNSLKRVIERYWWDTLRSPSTISAMLQLVYAD 225          
BLAST of mRNA_Ecto-sp8_S_contig104029.653.1 vs. uniprot
Match: D8TNS6_VOLCA (AB hydrolase-1 domain-containing protein n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8TNS6_VOLCA)

HSP 1 Score: 95.1 bits (235), Expect = 5.400e-21
Identity = 50/104 (48.08%), Postives = 67/104 (64.42%), Query Frame = 1
Query:   13 FINEVIGEPAYVAGNSLGGYIAANLAANYPRAVLGLALMNATPFWAFRKPNGGSPVEGSGDWLGW-DGTLPAPAGLFR-FGAWYFDRMRDPRTVKSMLGAVYSN 318
            F+ + +GEP YVAGNSLGGY+A  LAA  P  V GL L+NATPFWAFR P G +   G   W    DG++P P  L R    +++D++R P T+ +ML  VY++
Sbjct:   84 FLEQCVGEPVYVAGNSLGGYLAVMLAARRPDLVRGLVLLNATPFWAFRPPRGSAAARGP-IWSALADGSVPVPESLKRVIERYWWDKLRAPTTISAMLRLVYAD 186          
BLAST of mRNA_Ecto-sp8_S_contig104029.653.1 vs. uniprot
Match: A0A8J4DFR3_9CHLO (AB hydrolase-1 domain-containing protein n=3 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4DFR3_9CHLO)

HSP 1 Score: 93.6 bits (231), Expect = 3.380e-20
Identity = 48/107 (44.86%), Postives = 70/107 (65.42%), Query Frame = 1
Query:   13 FINEVIGEPAYVAGNSLGGYIAANLAANYPRAVLGLALMNATPFWAFRKPNGGSPVEG----SGDWLGWDGTLPAPAGLFRF-GAWYFDRMRDPRTVKSMLGAVYSN 318
            F+ + +GEPAYV GNSLGGY+A  LAA  P  V GL L+NATPFWAFR P+G +   G    + +W G DG++P P  +      ++++++R P T+ +ML  VY++
Sbjct:  155 FLEQCVGEPAYVVGNSLGGYLAVMLAARRPDLVRGLVLLNATPFWAFRPPSGSAAARGLLWSALNWAG-DGSVPVPESVRHLVEKYWWNQLRSPDTISAMLRLVYAD 260          
BLAST of mRNA_Ecto-sp8_S_contig104029.653.1 vs. uniprot
Match: A0A8J4AT54_9CHLO (AB hydrolase-1 domain-containing protein n=2 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4AT54_9CHLO)

HSP 1 Score: 93.6 bits (231), Expect = 3.380e-20
Identity = 48/107 (44.86%), Postives = 69/107 (64.49%), Query Frame = 1
Query:   13 FINEVIGEPAYVAGNSLGGYIAANLAANYPRAVLGLALMNATPFWAFRKPNGGSPVEG----SGDWLGWDGTLPAPAGLFRF-GAWYFDRMRDPRTVKSMLGAVYSN 318
            F+ + +GEPAYV GNSLGGY+A  LAA  P  V GL L+NATPFWAFR P G +   G    + +W G DG++P P  +      ++++++R P T+ +ML  VY++
Sbjct:  155 FLEQCVGEPAYVVGNSLGGYLAVMLAARRPDLVRGLVLLNATPFWAFRPPRGSAAARGLLWSALNWAG-DGSVPVPESVKHLVEKYWWNQLRSPATISAMLRLVYAD 260          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig104029.653.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FWK0_ECTSI7.770e-5767.10AB hydrolase-1 domain-containing protein n=1 Tax=E... [more]
A0A6H5J6H3_9PHAE8.550e-5667.10AB hydrolase-1 domain-containing protein n=1 Tax=E... [more]
A0A7S2UZQ6_9STRA1.410e-2351.89Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S0S6Z6_9CHLO5.590e-2351.40Hypothetical protein n=1 Tax=Chlamydomonas leiostr... [more]
A0A836BNK1_9CHLO4.090e-2250.94AB hydrolase-1 domain-containing protein n=1 Tax=E... [more]
A0A8J5XDH3_DIALT3.440e-2149.04AB hydrolase-1 domain-containing protein n=1 Tax=D... [more]
A0A836BCE3_9CHLO4.850e-2147.75AB hydrolase-1 domain-containing protein n=1 Tax=C... [more]
D8TNS6_VOLCA5.400e-2148.08AB hydrolase-1 domain-containing protein n=1 Tax=V... [more]
A0A8J4DFR3_9CHLO3.380e-2044.86AB hydrolase-1 domain-containing protein n=3 Tax=V... [more]
A0A8J4AT54_9CHLO3.380e-2044.86AB hydrolase-1 domain-containing protein n=2 Tax=V... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig104029contigEcto-sp8_S_contig104029:59..523 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score193.0
Seed ortholog evalue7.2e-47
Seed eggNOG ortholog2880.D7FWK0
Model size318
Hectar predicted targeting categoryother localisation
Exons2
EggNOG free text desc.regulation of endocannabinoid signaling pathway
EggNOG OGsCOG0596@1,KOG1454@2759
Cds size318
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681143139.7900712-CDS-Ecto-sp8_S_contig104029:58..2111681143139.7900712-CDS-Ecto-sp8_S_contig104029:58..211Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig104029 59..211 -
1681143139.801317-CDS-Ecto-sp8_S_contig104029:358..5231681143139.801317-CDS-Ecto-sp8_S_contig104029:358..523Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig104029 359..523 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig104029.653.1prot_Ecto-sp8_S_contig104029.653.1Ectocarpus species8 EcLAC_412polypeptideEcto-sp8_S_contig104029 59..523 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp8_S_contig104029.653.1

>prot_Ecto-sp8_S_contig104029.653.1 ID=prot_Ecto-sp8_S_contig104029.653.1|Name=mRNA_Ecto-sp8_S_contig104029.653.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=106bp
KVLAFINEVIGEPAYVAGNSLGGYIAANLAANYPRAVLGLALMNATPFWA
FRKPNGGSPVEGSGDWLGWDGTLPAPAGLFRFGAWYFDRMRDPRTVKSML
GAVYSN
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mRNA from alignment at Ecto-sp8_S_contig104029:59..523-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp8_S_contig104029.653.1 ID=mRNA_Ecto-sp8_S_contig104029.653.1|Name=mRNA_Ecto-sp8_S_contig104029.653.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=465bp|location=Sequence derived from alignment at Ecto-sp8_S_contig104029:59..523- (Ectocarpus species8 EcLAC_412)
AAGGTCCTTGCTTTCATCAACGAAGTCATTGGAGAGCCGGCCTACGTCGC CGGGAACTCCCTGGGAGGATACATCGCCGCCAACCTCGCCGCGAACTACC CCCGCGCCGTTCTAGGACTGGCGCTCATGAATGCCACACCCTTTTGGGCT TTTCGGAAGCCTAACGTCAACGCCGCCTTAAATGGGGGGGACGTTATGGA TCTCTCCCCCCGCACGGATATTTCCGCGACCAGAGATGGTTCGACTGGGT CCACTACGAGTAAGGGGATCCCCACGGATTCTGAGATTGTTCCGGGAAAC CCCGCGATAAAGGGGGGGTCCCCGGTAGAAGGAAGCGGGGATTGGTTAGG CTGGGACGGGACTTTGCCTGCCCCGGCGGGTTTGTTCCGCTTCGGGGCGT GGTACTTCGACCGCATGAGGGACCCTCGGACCGTAAAGAGCATGCTAGGC GCGGTCTACAGCAAC
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Coding sequence (CDS) from alignment at Ecto-sp8_S_contig104029:59..523-

>mRNA_Ecto-sp8_S_contig104029.653.1 ID=mRNA_Ecto-sp8_S_contig104029.653.1|Name=mRNA_Ecto-sp8_S_contig104029.653.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=318bp|location=Sequence derived from alignment at Ecto-sp8_S_contig104029:59..523- (Ectocarpus species8 EcLAC_412)
AAGGTCCTTGCTTTCATCAACGAAGTCATTGGAGAGCCGGCCTACGTCGC
CGGGAACTCCCTGGGAGGATACATCGCCGCCAACCTCGCCGCGAACTACC
CCCGCGCCGTTCTAGGACTGGCGCTCATGAATGCCACACCCTTTTGGGCT
TTTCGGAAGCCTAACGGGGGGTCCCCGGTAGAAGGAAGCGGGGATTGGTT
AGGCTGGGACGGGACTTTGCCTGCCCCGGCGGGTTTGTTCCGCTTCGGGG
CGTGGTACTTCGACCGCATGAGGGACCCTCGGACCGTAAAGAGCATGCTA
GGCGCGGTCTACAGCAAC
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