mRNA_Ecto-sp8_S_contig10401.651.1 (mRNA) Ectocarpus species8 EcLAC_412

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp8_S_contig10401.651.1
Unique NamemRNA_Ecto-sp8_S_contig10401.651.1
TypemRNA
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Homology
BLAST of mRNA_Ecto-sp8_S_contig10401.651.1 vs. uniprot
Match: A0A6H5JG59_9PHAE (NADH-cytochrome b5 reductase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG59_9PHAE)

HSP 1 Score: 484 bits (1246), Expect = 8.310e-168
Identity = 240/248 (96.77%), Postives = 243/248 (97.98%), Query Frame = 3
Query:    3 EFRDFPLREIEEMTHNVRRFRIGLPSEEHVMGMKTASCIVVKGKGKDGSVAVRPYTPTTTNDTKGHFDLVIKVYPEGNVSSHLFSLKVGDMVTVKGPFPKFDYSPNVKKEIGMISGGTGITPMLQVLQELLLNPEDKTKVTLLFANVTAADIMLKAEIDKLAAEHDNFDVVYIVDKAEEGWTGPTGHVNASLIETHLPKPSEDSVIFVCGPPGMMNAISGPKNEDKSQGEIGGVLKGLGYTSDMVYKF 746
            EFRDFPLREIE+MTHNVRRFRIGLPSEEHVMGMKTASCIVVKGKGKDGSVAVRPYTPTTTNDTKGHFDLVIKVYPEGNVSSHLFSLKVGD V VKGPFPKFDYSPNVKKEIGMI+GGTGITPMLQVLQELLLNPEDKTKVTLLFANVTAADIMLKAEIDKLAAEHDNFDVVY+VDKAEEGWTG TGHVNASLIETHLPKPS DSVIFVCGPPGMMNAISGPKNEDKSQGEIGGVLK LGYTSDMVYKF
Sbjct:   64 EFRDFPLREIEDMTHNVRRFRIGLPSEEHVMGMKTASCIVVKGKGKDGSVAVRPYTPTTTNDTKGHFDLVIKVYPEGNVSSHLFSLKVGDTVAVKGPFPKFDYSPNVKKEIGMIAGGTGITPMLQVLQELLLNPEDKTKVTLLFANVTAADIMLKAEIDKLAAEHDNFDVVYVVDKAEEGWTGATGHVNASLIETHLPKPSGDSVIFVCGPPGMMNAISGPKNEDKSQGEIGGVLKALGYTSDMVYKF 311          
BLAST of mRNA_Ecto-sp8_S_contig10401.651.1 vs. uniprot
Match: A0A835ZLM4_9STRA (NADH-cytochrome b5 reductase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZLM4_9STRA)

HSP 1 Score: 294 bits (752), Expect = 2.360e-93
Identity = 139/248 (56.05%), Postives = 185/248 (74.60%), Query Frame = 3
Query:    3 EFRDFPLREIEEMTHNVRRFRIGLPSEEHVMGMKTASCIVVKGKGKDGSVAVRPYTPTTTNDTKGHFDLVIKVYPEGNVSSHLFSLKVGDMVTVKGPFPKFDYSPNVKKEIGMISGGTGITPMLQVLQELLLNPEDKTKVTLLFANVTAADIMLKAEIDKLAAEHDNFDVVYIVDKAEEGWTGPTGHVNASLIETHLPKPSEDSVIFVCGPPGMMNAISGPKNEDKSQGEIGGVLKGLGYTSDMVYKF 746
            E+R+FP+ E+  ++H+ + F+I LPS +H  G++TASC++V+G G DG   VRPYTPTT N T GHFDLVIK YPEGNVSS++  LK GD + VKGPFPK   +PN+K+ IGMI+GGTGITPM Q + ELL   +D T +TLLF N T +DI+LKAE+D LAA H  F +VYIVDK +  W G +G++ A+ I+ ++P PS D+++FVCGPP +M +ISG K +DKSQG + G LK  G+T +MVYKF
Sbjct:   46 EWREFPVSEVHTLSHDTKMFKIQLPSSKHETGLETASCLLVQGTGLDGKPTVRPYTPTTLNKTLGHFDLVIKRYPEGNVSSYMHGLKPGDKLMVKGPFPKLKVTPNMKRNIGMIAGGTGITPMYQCILELLDASDDATNITLLFGNRTPSDILLKAELDALAATHPRFKLVYIVDKPDSSWKGLSGYITANEIQKYMPPPSADNMVFVCGPPPLMKSISGDKAKDKSQGPLEGALKACGFTEEMVYKF 293          
BLAST of mRNA_Ecto-sp8_S_contig10401.651.1 vs. uniprot
Match: A0A7S2V2T1_9STRA (NADH-cytochrome b5 reductase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2T1_9STRA)

HSP 1 Score: 286 bits (732), Expect = 2.550e-90
Identity = 141/249 (56.63%), Postives = 177/249 (71.08%), Query Frame = 3
Query:    3 EFRDFPLREIEEMTHNVRRFRIGLPSEEHVMGMKTASCIVVKGKGKDGSVA-VRPYTPTTTNDTKGHFDLVIKVYPEGNVSSHLFSLKVGDMVTVKGPFPKFDYSPNVKKEIGMISGGTGITPMLQVLQELLLNPEDKTKVTLLFANVTAADIMLKAEIDKLAAEHDNFDVVYIVDKAEEGWTGPTGHVNASLIETHLPKPSEDSVIFVCGPPGMMNAISGPKNEDKSQGEIGGVLKGLGYTSDMVYKF 746
            E+R FPL +I E+T N   FR  LPS+EH MG+  ASCI VK   K+G    +RPYTPTT ND KG+FDL++K YP G VSS+  +LK+GD + VKGP+ K  Y PN+ K IGMI+GGTGITPMLQ+L+ +L NP+DKT+V L+FAN T  DIM K  +D++A E+ NF V Y+V K    W G  G V+   +E  +P P E +++FVCGPPGMM +ISG K EDKSQGE+ GVLK  GYTS MVYKF
Sbjct:   47 EWRSFPLVQIRELTPNTSLFRFNLPSQEHEMGLSVASCIEVKAPPKEGGKPMIRPYTPTTNNDVKGYFDLIVKDYPNGKVSSYFHNLKIGDSILVKGPYDKLQYKPNMFKRIGMIAGGTGITPMLQMLKVILSNPKDKTEVHLVFANNTEDDIMQKNVLDQMAVEYHNFHVHYVVAKPRPSWKGGVGFVDLDTVERKIPAPEEGTMVFVCGPPGMMESISGDKAEDKSQGEVSGVLKERGYTSGMVYKF 295          
BLAST of mRNA_Ecto-sp8_S_contig10401.651.1 vs. uniprot
Match: A0A836C9R3_9STRA (NADH-cytochrome b5 reductase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9R3_9STRA)

HSP 1 Score: 285 bits (728), Expect = 8.910e-90
Identity = 138/249 (55.42%), Postives = 180/249 (72.29%), Query Frame = 3
Query:    3 EFRDFPLREIEEMTHNVRRFRIGLPSEEHVMGMKTASCIVVKGKGKDGSVAV-RPYTPTTTNDTKGHFDLVIKVYPEGNVSSHLFSLKVGDMVTVKGPFPKFDYSPNVKKEIGMISGGTGITPMLQVLQELLLNPEDKTKVTLLFANVTAADIMLKAEIDKLAAEHDNFDVVYIVDKAEEGWTGPTGHVNASLIETHLPKPSEDSVIFVCGPPGMMNAISGPKNEDKSQGEIGGVLKGLGYTSDMVYKF 746
            E+R F ++EI  ++H+ ++F + LPSEEH +GM TASC++V+G G DG+  V RPYTPT+ N TKGHF+LVIK Y +G VSS++  L VGD + VKGPFPK    PN+KK IG+I+GGTGITPM Q +QELL    D T++ LL+ N T  DI+LK+E+D LA ++  F VVY V +A +GWTGP GH+     + +LP PS+D ++FVCGPP +M AISG K  DKSQG + GVLK LGYT   VYKF
Sbjct:   43 EWRQFTVKEITPLSHDTKKFTVALPSEEHELGMVTASCLMVEGTGLDGTSQVARPYTPTSLNGTKGHFELVIKKYDKGQVSSYMHGLSVGDAIKVKGPFPKIKLDPNMKKRIGLIAGGTGITPMYQCIQELLEADGDATEMVLLYGNKTPKDILLKSELDALATKYPRFSVVYKVGEATDGWTGPVGHIGLEDCKQYLPPPSDDHMVFVCGPPPLMKAISGDKGPDKSQGAVDGVLKELGYTETQVYKF 291          
BLAST of mRNA_Ecto-sp8_S_contig10401.651.1 vs. uniprot
Match: A0A1Y1Y340_9FUNG (NADH-cytochrome b5 reductase n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1Y340_9FUNG)

HSP 1 Score: 280 bits (715), Expect = 2.810e-87
Identity = 137/254 (53.94%), Postives = 182/254 (71.65%), Query Frame = 3
Query:    3 EFRDFPLREIEEMTHNVRRFRIGLPSEEHVMGMKTASCIVVK-----GKGKDGSVAVRPYTPTTTNDTKGHFDLVIKVYPEGNVSSHLFSLKVGDMVTVKGPFPKFDYSPNVKKEIGMISGGTGITPMLQVLQELLLNPEDKTKVTLLFANVTAADIMLKAEIDKLAAEH-DNFDVVYIVDKAEEGWTGPTGHVNASLIETHLPKPSEDSVIFVCGPPGMMNAISGPKNEDKSQGEIGGVLKGLGYTSDMVYKF 746
            +F DF L E+EE+ HN + FR  LP  E  +GM  ASC++ K     GKG    V +RPYTPT+ +DT GHFD++IK YP G +S H+ ++K GD + VKGPFPK+ Y PN    IGMI+GGTGITPMLQV++++  NPEDKTK+TL+FANV   DI+L+ E+DKLA EH + F + Y +D A +GWT   G VNA +++  +PKP+ED+++FVCGP  M+ ++SG KN DKSQG +GG+LK LGYT   VYKF
Sbjct:   82 QFIDFKLLEVEEINHNTKLFRFELPEGE-TLGMSVASCVITKVPKAGGKG----VIIRPYTPTSDDDTVGHFDMIIKKYPNGPMSEHIHNMKPGDTLAVKGPFPKYTYKPNTLSHIGMIAGGTGITPMLQVIRKVFKNPEDKTKITLVFANVNEDDILLRDELDKLAMEHPEQFKLYYTLDNAPKGWTQGQGRVNAEVVKDFMPKPAEDTMVFVCGPDPMVASLSGAKNPDKSQGALGGILKELGYTESNVYKF 330          
BLAST of mRNA_Ecto-sp8_S_contig10401.651.1 vs. uniprot
Match: A0A6S9JGT0_HETAK (NADH-cytochrome b5 reductase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9JGT0_HETAK)

HSP 1 Score: 275 bits (702), Expect = 7.590e-86
Identity = 127/248 (51.21%), Postives = 183/248 (73.79%), Query Frame = 3
Query:    3 EFRDFPLREIEEMTHNVRRFRIGLPSEEHVMGMKTASCIVVKGKGKDGSVAVRPYTPTTTNDTKGHFDLVIKVYPEGNVSSHLFSLKVGDMVTVKGPFPKFDYSPNVKKEIGMISGGTGITPMLQVLQELLLNPEDKTKVTLLFANVTAADIMLKAEIDKLAAEHDNFDVVYIVDKAEEGWTGPTGHVNASLIETHLPKPSEDSVIFVCGPPGMMNAISGPKNEDKSQGEIGGVLKGLGYTSDMVYKF 746
            E+R F L ++ E+TH+   FR  LP+ +H MGMKT+SCI+V+G+ + GS+  RPYTPT+TN+ KG FDL++K YP GNVSS++  LK+GD + VKGP+ K +Y PN+ K IGMI+GG+GITPM+Q+ +E+L NP+D T+++L+FAN T  DIM KA +D++AA++ NF V Y V  A  GW    G  +A +IE  +P P   +++FVCGP GMM+A+ GPK ++ +QGE+ G+LK  G+T++ VYKF
Sbjct:   46 EWRSFKLIQVRELTHDTSLFRFALPTTQHEMGMKTSSCIMVQGETRTGSMVARPYTPTSTNEQKGFFDLIVKNYPNGNVSSYIHGLKIGDNLNVKGPYMKLEYKPNMFKRIGMIAGGSGITPMIQLCREILSNPDDTTEISLIFANNTEGDIMQKAWLDQMAAQYHNFRVYYTVRDAPAGWRQGQGVCDAEMIEKKMPAPEAGTMVFVCGPDGMMDAVCGPKGKNYTQGELQGLLKERGFTAEQVYKF 293          
BLAST of mRNA_Ecto-sp8_S_contig10401.651.1 vs. uniprot
Match: A9RJM3_PHYPA (NADH-cytochrome b5 reductase n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9RJM3_PHYPA)

HSP 1 Score: 271 bits (694), Expect = 4.500e-85
Identity = 131/253 (51.78%), Postives = 180/253 (71.15%), Query Frame = 3
Query:    3 EFRDFPLREIEEMTHNVRRFRIGLPSEEHVMGMKTASCIVVK---GKGKDGS--VAVRPYTPTTTNDTKGHFDLVIKVYPEGNVSSHLFSLKVGDMVTVKGPFPKFDYSPNVKKEIGMISGGTGITPMLQVLQELLLNPEDKTKVTLLFANVTAADIMLKAEIDKLAAEHDNFDVVYIVDKAEEGWTGPTGHVNASLIETHLPKPSEDSVIFVCGPPGMMNAISGPKNEDKSQGEIGGVLKGLGYTSDMVYKF 746
            EF  F + E+ ++ HN + +R    S+E  +G+  ASC++ K   GK KDGS    +RPYTP +  D+KG+FDL++K+YP G ++ HL  LK GD + VKGP PK  Y+PN+KK+IGMI+GGTGITPMLQV+  ++ NPED T+V+L+FAN T ADI+LK+++D L+  H NF V Y+VD     W G  G++N  ++   LP PS+D++I VCGPPG+MN ISG K  D+SQGE+ G+LK LGYTS+ VYKF
Sbjct:   12 EFVKFKVSEVRDVNHNTKLYRFTFDSQE-ALGLHVASCLITKAEIGKKKDGSPNYVIRPYTPISPPDSKGYFDLLVKIYPNGKMTQHLAQLKPGDTLDVKGPIPKLPYAPNMKKQIGMIAGGTGITPMLQVIDAIVSNPEDNTQVSLVFANTTPADILLKSKLDALSFAHPNFKVYYVVDSPTNDWKGGKGYINKDVLLKGLPSPSDDTLILVCGPPGLMNLISGDKAPDRSQGELVGLLKELGYTSEQVYKF 263          
BLAST of mRNA_Ecto-sp8_S_contig10401.651.1 vs. uniprot
Match: A0A137P6R8_CONC2 (Ferredoxin reductase-like protein (Fragment) n=1 Tax=Conidiobolus coronatus (strain ATCC 28846 / CBS 209.66 / NRRL 28638) TaxID=796925 RepID=A0A137P6R8_CONC2)

HSP 1 Score: 269 bits (688), Expect = 2.650e-84
Identity = 130/251 (51.79%), Postives = 179/251 (71.31%), Query Frame = 3
Query:    3 EFRDFPLREIEEMTHNVRRFRIGLPSEEHVMGMKTASCIVVKGKGKDGSVAVRPYTPTTTNDTKGHFDLVIKVYPEGNVSSHLFSLKVGDMVTVKGPFPKFDYSPNVKKEIGMISGGTGITPMLQVLQELLLNPEDKTKVTLLFANVTAADIMLKAEIDKLAAEH-DNFDVVYIVDKAEEGWTGPTGHVNASLIETHLPKPSED--SVIFVCGPPGMMNAISGPKNEDKSQGEIGGVLKGLGYTSDMVYKF 746
            EF+ F L+EI+ ++H+ + FR  LP + + +G+  ASC++ K  GKDG   +RPYTPT+    +G+FD +IK Y  G +S H+ SLKVGD + VKGPFPK+ Y+ N   EIG+I+GGTGITPMLQ+++++L NP+DKTK+  +FAN T  DI+LK E+DKLA +H D F + YI+   E GW+G  GHVN  +I+  L K S D  S++FVCGPPGM+  + GPK +D SQGE+ G+LK LGY+ D VYKF
Sbjct:    6 EFKAFKLKEIQSISHDTKLFRFELPPDSN-LGLPIASCVLTKAPGKDGKDVMRPYTPTSRETDRGYFDFIIKRYESGTMSKHIHSLKVGDTLEVKGPFPKYPYTANTHSEIGLIAGGTGITPMLQLIRKVLDNPQDKTKINFIFANRTTKDILLKDELDKLAKQHPDRFKIKYIISNKEPGWSGDVGHVNKDMIKNTL-KGSADKQSIVFVCGPPGMVELVCGPKAKDNSQGEVKGILKDLGYSGDNVYKF 254          
BLAST of mRNA_Ecto-sp8_S_contig10401.651.1 vs. uniprot
Match: A0A2K1KNZ2_PHYPA (FAD-binding FR-type domain-containing protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1KNZ2_PHYPA)

HSP 1 Score: 271 bits (694), Expect = 6.080e-84
Identity = 131/253 (51.78%), Postives = 180/253 (71.15%), Query Frame = 3
Query:    3 EFRDFPLREIEEMTHNVRRFRIGLPSEEHVMGMKTASCIVVK---GKGKDGS--VAVRPYTPTTTNDTKGHFDLVIKVYPEGNVSSHLFSLKVGDMVTVKGPFPKFDYSPNVKKEIGMISGGTGITPMLQVLQELLLNPEDKTKVTLLFANVTAADIMLKAEIDKLAAEHDNFDVVYIVDKAEEGWTGPTGHVNASLIETHLPKPSEDSVIFVCGPPGMMNAISGPKNEDKSQGEIGGVLKGLGYTSDMVYKF 746
            EF  F + E+ ++ HN + +R    S+E  +G+  ASC++ K   GK KDGS    +RPYTP +  D+KG+FDL++K+YP G ++ HL  LK GD + VKGP PK  Y+PN+KK+IGMI+GGTGITPMLQV+  ++ NPED T+V+L+FAN T ADI+LK+++D L+  H NF V Y+VD     W G  G++N  ++   LP PS+D++I VCGPPG+MN ISG K  D+SQGE+ G+LK LGYTS+ VYKF
Sbjct:   93 EFVKFKVSEVRDVNHNTKLYRFTFDSQE-ALGLHVASCLITKAEIGKKKDGSPNYVIRPYTPISPPDSKGYFDLLVKIYPNGKMTQHLAQLKPGDTLDVKGPIPKLPYAPNMKKQIGMIAGGTGITPMLQVIDAIVSNPEDNTQVSLVFANTTPADILLKSKLDALSFAHPNFKVYYVVDSPTNDWKGGKGYINKDVLLKGLPSPSDDTLILVCGPPGLMNLISGDKAPDRSQGELVGLLKELGYTSEQVYKF 344          
BLAST of mRNA_Ecto-sp8_S_contig10401.651.1 vs. uniprot
Match: A0A8H7EQF0_9FUNG (NADH-cytochrome b5 reductase n=1 Tax=Apophysomyces ossiformis TaxID=679940 RepID=A0A8H7EQF0_9FUNG)

HSP 1 Score: 270 bits (690), Expect = 2.270e-83
Identity = 132/256 (51.56%), Postives = 186/256 (72.66%), Query Frame = 3
Query:    3 EFRDFPLREIEEMTHNVRRFRIGLPSEEHVMGMKTASCIVVKGK--GKDGSVA--VRPYTPTTTNDTKGHFDLVIKVYPEGNVSSHLFSLKVGDMVTVKGPFPKFDYSPNVKKEIGMISGGTGITPMLQVLQELL--LNPEDKTKVTLLFANVTAADIMLKAEIDKLAAEH-DNFDVVYIVDKAEEGWTGPTGHVNASLIETHLPKPSED-SVIFVCGPPGMMNAISGPKNEDKSQGEIGGVLKGLGYTSDMVYKF 746
            +F+ F L+++E + HN   +R  L S+ HV G+  ASC++ +     KDGS    +RPYTPT+T DTKGH D +IKVYPEG +S H+ +LKVG+ + +KGPFPK+++  N  + +GMI+GGTGITPMLQ+++++    +P+DKTK+TL+FAN    DI+LK E+D +A ++ D F VVY ++K  + W+GPTG VNA LI++HLP P  D S++FVCGP  M+ A+SGPK +DKSQGE+ GVLK LGY  + VYKF
Sbjct:   87 QFKPFKLQKVEPINHNTSLYRFELDSDNHVAGLPIASCVITRYPITKKDGSTGYVIRPYTPTSTADTKGHVDFIIKVYPEGKMSQHIHNLKVGETLEIKGPFPKYNWEENPVENVGMIAGGTGITPMLQIIRKVFDAKSPDDKTKITLIFANEAEDDILLKDELDTIAKQNPDRFKVVYALNKPPKDWSGPTGFVNADLIKSHLPGPENDKSIVFVCGPDPMLAALSGPKAQDKSQGELAGVLKELGYAKERVYKF 342          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig10401.651.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JG59_9PHAE8.310e-16896.77NADH-cytochrome b5 reductase n=1 Tax=Ectocarpus sp... [more]
A0A835ZLM4_9STRA2.360e-9356.05NADH-cytochrome b5 reductase n=1 Tax=Tribonema min... [more]
A0A7S2V2T1_9STRA2.550e-9056.63NADH-cytochrome b5 reductase n=1 Tax=Fibrocapsa ja... [more]
A0A836C9R3_9STRA8.910e-9055.42NADH-cytochrome b5 reductase n=1 Tax=Tribonema min... [more]
A0A1Y1Y340_9FUNG2.810e-8753.94NADH-cytochrome b5 reductase n=1 Tax=Basidiobolus ... [more]
A0A6S9JGT0_HETAK7.590e-8651.21NADH-cytochrome b5 reductase n=1 Tax=Heterosigma a... [more]
A9RJM3_PHYPA4.500e-8551.78NADH-cytochrome b5 reductase n=1 Tax=Physcomitrium... [more]
A0A137P6R8_CONC22.650e-8451.79Ferredoxin reductase-like protein (Fragment) n=1 T... [more]
A0A2K1KNZ2_PHYPA6.080e-8451.78FAD-binding FR-type domain-containing protein n=1 ... [more]
A0A8H7EQF0_9FUNG2.270e-8351.56NADH-cytochrome b5 reductase n=1 Tax=Apophysomyces... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig10401contigEcto-sp8_S_contig10401:926..6031 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeViridiplantae
Stop1
Start1
Seed ortholog score262.7
Seed ortholog evalue1.7e-67
Seed eggNOG ortholog248742.XP_005645756.1
Model size1455
KEGG koko:K00326
KEGG ReactionR00100
KEGG Pathwayko00520,map00520
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004128,GO:0005488,GO:0005507,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005758,GO:0005794,GO:0006950,GO:0006970,GO:0008150,GO:0008152,GO:0009505,GO:0009628,GO:0009651,GO:0012505,GO:0016491,GO:0016651,GO:0016653,GO:0030312,GO:0031967,GO:0031970,GO:0031974,GO:0031975,GO:0043167,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046872,GO:0046914,GO:0050896,GO:0055114,GO:0070013,GO:0071944
Exons6
EggNOG free text desc.Belongs to the flavoprotein pyridine nucleotide cytochrome reductase family
EggNOG OGs34KKS@3041,37RUI@33090,COG0543@1,KOG0534@2759
EC1.6.2.2
Cds size711
COG Functional cat.C
Best tax levelChlorophyta
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig10401.651.1prot_Ecto-sp8_S_contig10401.651.1Ectocarpus species8 EcLAC_412polypeptideEcto-sp8_S_contig10401 964..5325 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681143139.624387-UTR-Ecto-sp8_S_contig10401:925..9631681143139.624387-UTR-Ecto-sp8_S_contig10401:925..963Ectocarpus species8 EcLAC_412UTREcto-sp8_S_contig10401 926..963 +
1681143139.7023609-UTR-Ecto-sp8_S_contig10401:5325..60311681143139.7023609-UTR-Ecto-sp8_S_contig10401:5325..6031Ectocarpus species8 EcLAC_412UTREcto-sp8_S_contig10401 5326..6031 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681143139.6380515-CDS-Ecto-sp8_S_contig10401:963..11191681143139.6380515-CDS-Ecto-sp8_S_contig10401:963..1119Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig10401 964..1119 +
1681143139.6480436-CDS-Ecto-sp8_S_contig10401:1601..16881681143139.6480436-CDS-Ecto-sp8_S_contig10401:1601..1688Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig10401 1602..1688 +
1681143139.6561315-CDS-Ecto-sp8_S_contig10401:2489..25651681143139.6561315-CDS-Ecto-sp8_S_contig10401:2489..2565Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig10401 2490..2565 +
1681143139.665076-CDS-Ecto-sp8_S_contig10401:3286..34501681143139.665076-CDS-Ecto-sp8_S_contig10401:3286..3450Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig10401 3287..3450 +
1681143139.6762598-CDS-Ecto-sp8_S_contig10401:3994..41231681143139.6762598-CDS-Ecto-sp8_S_contig10401:3994..4123Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig10401 3995..4123 +
1681143139.6900048-CDS-Ecto-sp8_S_contig10401:5226..53251681143139.6900048-CDS-Ecto-sp8_S_contig10401:5226..5325Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig10401 5227..5325 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp8_S_contig10401.651.1

>prot_Ecto-sp8_S_contig10401.651.1 ID=prot_Ecto-sp8_S_contig10401.651.1|Name=mRNA_Ecto-sp8_S_contig10401.651.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=237bp
MTHNVRRFRIGLPSEEHVMGMKTASCIVVKGKGKDGSVAVRPYTPTTTND
TKGHFDLVIKVYPEGNVSSHLFSLKVGDMVTVKGPFPKFDYSPNVKKEIG
MISGGTGITPMLQVLQELLLNPEDKTKVTLLFANVTAADIMLKAEIDKLA
AEHDNFDVVYIVDKAEEGWTGPTGHVNASLIETHLPKPSEDSVIFVCGPP
GMMNAISGPKNEDKSQGEIGGVLKGLGYTSDMVYKF*
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mRNA from alignment at Ecto-sp8_S_contig10401:926..6031+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp8_S_contig10401.651.1 ID=mRNA_Ecto-sp8_S_contig10401.651.1|Name=mRNA_Ecto-sp8_S_contig10401.651.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=5106bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10401:926..6031+ (Ectocarpus species8 EcLAC_412)
AGGAGTTCCGGGACTTTCCCCTGCGGGAAATCGAGGAGATGACGCACAAC GTGAGGCGGTTCCGCATCGGCCTGCCCTCGGAGGAGCACGTGATGGGCAT GAAGACGGCCTCGTGCATCGTGGTCAAGGGGAAGGGCAAGGACGGGAGCG TGGCCGTACGGCCGTACACCCCGACCACTACCAACGACACCAAGGTCAGT GTCTGGAGAGAGGGAGAGGGAGGGAGGGGGGCCTCGCGGCAAGCCAGGTG GTCAGTTCAACACATCCCCTCCTGCAGGGATGAGAAGTTAATGATCCAAC GACTACGGCATGCGTTTACATGAGTACAACCCCTGCTGCAGTTGTCTTTC AACAAGTTTGTTTAGTTTTGCTTTTTTTTCGTTTTCCTCTGTAATAGTTT GGTGTTTCAAAGTGGGTGATTGCCGTTTTGGGGTACGTAGTTGGTCTGTG ATCACGGAAGGCGTCCGCGTGAGTTGGAAGGGACTAAGCAGAGGCCGGAA CGGCATATAAATGCAAAGACAACACAACAGAAACAGTAACAACAACGCCA GCCCTTTTTTGTTGAAGGATGACGCGAATTTTCCTGTTTCTCTACGTTAG CACTCTCTCAAGAACCCAACGCCATCCCCCCCACCCCACCCTTTGACTCC CATGCGGGCATGTTGCTTGTGATCAGGGCCACTTCGACTTGGTGATCAAG GTCTACCCCGAAGGCAACGTGTCCAGTCACTTGTTCAGCCTCAAGGTCGG CGACATGGTCACGGTGAGCGCAGCGGTCATCGTCCGCAGACAGACGAAAG GATTAGGTTAGGGTTCGGGTTGCCGTACGTCCGTCAACCAGTAACATTCG CAGCGTGTTTCGTTCAAGTAAACATGTTGGATAAAGTATGGAGTTTGGGG AAGTTGGGTTGGGGATAGGGTCTGCGTACCCCCCTCCCTGTTCCATTCCT TCGTAAACCTCATTTTTCGCGAAGGCGCGAAGGCGGTTCACGTCAAACCT ACCCCCCCCCCCCATGGCTATGTAACCTTCACTACCGTACAACATGCATT TGGTTTGGGGGCTGCTGGTGTTTTGCGTCTAGAGAAAGCGAGTCCCGCCA CGTGCGGTTTTTGTGCAAAGGGAGGGTCGAACGCGGGAAGGCGATGCGCG CTTCCTGGGGTGTTCCGTTTGGCCCCTCTTCCCGCAGGAAATTCGAGCTG GTAAACCGCGAAAACCTGCGCATAAATTTGGTACATTTTCCCGGGTGTTT GGCCCCCCCGTCGCTTTCCGAGTCGAGGCCCCTTGTTAATTGTCCAAGAG TTGTTGGGCTGGTATGTCACGGTTCGGGTTTGATGGTAACTCGCGTACGA TTTGAAGGGTTTGGTTCTCCTCACAATCACATCTCCTCACGCCAACTCTC GTCTTCTTTTGCAACAACTTGTCCTGTTTTTTGGTGCGATTGATGTGGTG AAAATATCCCCCTATGTTGCATGCGGCGGCAACGGCGGCGATGACGGTGT CGCTTTTTTCCGGTACCGGGGGGGGGGGTGCTTGACGGGCCGGGTGCGCT GCTGGGCTGCTCAGGTGAAGGGACCGTTCCCCAAGTTCGACTACTCGCCG AACGTTAAGAAAGAGATCGGAATGATCTCAGGCGGGACTGGTGAGTCGTC TAAGTTTGGGCATCGTACTTTTGGTGGTCATAATTGCCGTGTGCCACGGC TGCTTCCCCAGTTGATTTTTTACTTTGTTTTTGTGTCTCGGTAAGATGGC GTCACGAACGGATAGAAAGAAGGTACGGCTTGTGCTGCTGGAATATTCCA ATCCTCGCCAAATCCCAACGGCGAACAAGGAAGCGGTTTTTTCGCTCTGC GTAGATTCTGTTTTTCGAGGCAATCTTGGATTTGTCGTTGCCCCCTCTCT CCCATCCTTTTTTGTGGCCGTGCGATGGATGTATTTCTTTCCAGTAACCT CCGTTTAGGTTGGACCAACGCGCTCATTTTCATTCGAGCATTGCAAACTG TAGCATAGTAATTGTTTTCGTGATCTTGGTGTGGTTCTTATCGATCTACT TCATTATTTTTGTGCTTGTTATTGGCTTGTCTGTCGACGACACTTACCTC TCTCTCCCTAGGACTTGACACCCCCACACACACGCCACACGACGAACAAT TCACCACGGAAAGAAAACAGGCATCACACCAACGCTGCAGGTGCTACCTA GGTTTACGACGAACTCCCCGCCTGCGCTTTGCACGCGGCATACCATAAAT CAACACCAAAAAACAGGTTTTATTCCGATGCTGCACGTGCTGCCTAGGAT TCACCGCCAACTCCCACACACACTTCGCACGCGACATATTAATCAACGCC GAAAAATGCAGGCATCACACCGATGCTGCAGGTGCTGCAGGAGCTGCTGC TGAACCCTGAGGACAAGACGAAGGTGACCCTCCTCTTCGCCAACGTTACC GCGGCCGACATCATGCTCAAGGCTGAGATCGACAAGCTTGCCGCGGAGCA CGACAACTTCGACGTCGTCTACATCGTAAGTGGACATCGTCATGAGGGGG GGGGGGGGTACTCACAGCCGTGCATGCCGTAGACCTCGAATCCCTACAAG ACCCGGACGGAGCACGCCGGGTTCTCATCGGACCAGGCTCTCTCTTATAT CACCAAGCGCGTAAGTGCCGTGCGGTACCTGATGGGCGTGTTTTATTACG GGAACACATGAGGATGTTTTCGCCGCCGGTAGTGATGAGCGAGATGGTGG TGTCGGTGGTTGTCCCGCTGTGCGCTGCTTCTGCGTGACAACTTGCTCTT TCTCGATGGTGTACCCCCCTCTCTCCTCCTCGAAATGATATGCTTGTCGG CGTTCGGAGAGGGCCTCAGTATCTCGAGCAGTCCCACAAAAAACAAGGGA TCACGAGCAAACGTTGAGGGGACCACAAACGTTCACAACAAGTAGTGGGG ACCCGCAAAAGGTGAACGAATGACAAGAAGCAAGTGGAGAAAATTGGGGA TCATCCGTGGATGAGTCAAGTCTTGCATGCGCTCAAGACGTGACTTGTCC GGCGTTTCCCTGCGTGAAGGTGGACAAGGCGGAGGAGGGGTGGACGGGGC CGACGGGACACGTCAACGCCTCCCTGATCGAGACTCATCTACCCAAGCCC TCCGAAGACTCGGTCATCTTCGTGTGCGGACCACCGGGCATGATGAACGT GAGTGGCGAGATCGAGGGCAGCAGATGTAGTGTGCTGGTGGCGTGGCTGG AGGAGTAGTCATGTTTTGCATGCCTTAGCTGTTAGCCCATCGGGGTGCGG GGGGGGGGAGGGTCCGCGTTCGAGAAGTTTCGTGTGTCTCCGAATAATGT TAGCTTCGCTCGTTGGCGTTGGCATTTGGAGTGACGTCCGTCACGGTGGC GGACTGCTTTCACGGGGAGACCAGTCCGCGCTGCAGGCACTCGCAGTCAC CCGTGCAGTTCGACCTACACGCAAAACTGTAACCCCGAGTACCCTTATTG TGTGAATGCGAAAGTCGTGGTGCGTGGGAAAGCACTACGATGTAGCACGG GGCCCGTCGAACGAGGGCAGCATGAAAGCTCGGGAGAGTGTTAAGCATCA ACTGCTGCCCTCGTCGGACGGGCCTCGTGCTACAACGTCGTAATGCTTTC CCGCACACCACGAAAAAAACACCCCATGACGATTCGAACGGTTTCGATAA ATGTGGGTTTGTATTTTGTCTACGCCTACAACAAGCCTGCCCCTCTCTTG CATCCCGCTAACTCTACGCTCGACCGAGGAAATGCCAAGTATTTTTGTGG ATCGTGACTGACGGAGCAGACGTCCCTAGCAGTTGTGTGACAAATCTCAT CTACGGGGCGAGAGCTGTTGTGAACACCCCGGGCCATGAAGTCCCGGGAA GAAGGGAAGTTTGTGGTCCGCCCTTACCCTGAGAGCCCCCCCTAGCCCCC GATGCACACACGTAGTGGCCTCTAGAAGTGTCTCCCGTTGTCGGCCGCGC TGAGACTGACGTATTTTCGTTGGTCAGCCGGTTTTGAGCGGCCGGTGTTG GGCGCAAGTACAGATACACACATTGTGTCCCGTTTTTGAGACTGACGAAA TTTCATGGGTCAGCTCCGTACAGCGTCATCGATGCTACTGTAGCTAGTAA GCACACACATTTTGGTTGGAAGGCGTGTTCACACGTTTCTATCCCGCTTG TCATTGGTCAGCCGGTTAGCGAGGTCAACGCTAATTGAAAAAAAATGCAC ACAACCGAACATGCCTCCGCTTGGTATTTCCCGATTCCCACACCTGCACA GGCCATTTCCGGGCCCAAGAACGAAGACAAGAGCCAAGGCGAAATCGGCG GGGTGCTTAAGGGGCTAGGCTACACCTCCGACATGGTCTACAAGTTCTGA GATTCAGGGATTTTTATTTGTTTCACCGTCTCTTGCATACTGATATGTGT CTCGTGAGCCCCAAGGTGTTTCCTCCGACAGCATGGTCTGTCACGAGATT TTTTAGGTTTTAGGATATGGATTTGCCACAATCCATCTGGGCGGTGCTGC GCATTCTCCGCCGGCGCTGAAAAGGCCGCGGTAGCTATAGCCTCAGCGTC CAAGTTTCCAATTTTGATCCGATATGCAAATTTTTTGGCGTTGGGACGTA TGTATGTATCCCACGAGTAATGATACAGGCCAACGGCACTGCTGTATTCG CGTCATGTATGCGGATGCTTGGCGATGCGAGTGCCGGCACGTGGTCTTAA CGCTTGGGTATTTGCGCCCCGTGATTTGCTGGGGGCCCTCAAGACCGGAA CGGAACGACGTGCCGTGGGTACCCACCCTGCAGGCAATCATTCGTGCCCC CCGACGCGAGATGAAACTCCCTCAAAGAGTTGCTGTGTCAGAAACCGCAG CATCAGGATTGTCAGGGGCGGTCAAAGAAAAAGACCGAGGACCGGCGGCG ATTAATCTTGGAGGAACCAAAAGCAGTCGACCTGCTCAAAGGAACAAAAA AAACTGGTGCTATTTACTGCCACACAGTAACTGGCTCAGATTTACACGTT CAAGAAGATCAATAAAACAATTCCCCAAAAAATCGCCAACTACAACATAC AAGGTG
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Coding sequence (CDS) from alignment at Ecto-sp8_S_contig10401:926..6031+

>mRNA_Ecto-sp8_S_contig10401.651.1 ID=mRNA_Ecto-sp8_S_contig10401.651.1|Name=mRNA_Ecto-sp8_S_contig10401.651.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=711bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10401:926..6031+ (Ectocarpus species8 EcLAC_412)
ATGACGCACAACGTGAGGCGGTTCCGCATCGGCCTGCCCTCGGAGGAGCA
CGTGATGGGCATGAAGACGGCCTCGTGCATCGTGGTCAAGGGGAAGGGCA
AGGACGGGAGCGTGGCCGTACGGCCGTACACCCCGACCACTACCAACGAC
ACCAAGGGCCACTTCGACTTGGTGATCAAGGTCTACCCCGAAGGCAACGT
GTCCAGTCACTTGTTCAGCCTCAAGGTCGGCGACATGGTCACGGTGAAGG
GACCGTTCCCCAAGTTCGACTACTCGCCGAACGTTAAGAAAGAGATCGGA
ATGATCTCAGGCGGGACTGGCATCACACCGATGCTGCAGGTGCTGCAGGA
GCTGCTGCTGAACCCTGAGGACAAGACGAAGGTGACCCTCCTCTTCGCCA
ACGTTACCGCGGCCGACATCATGCTCAAGGCTGAGATCGACAAGCTTGCC
GCGGAGCACGACAACTTCGACGTCGTCTACATCGTGGACAAGGCGGAGGA
GGGGTGGACGGGGCCGACGGGACACGTCAACGCCTCCCTGATCGAGACTC
ATCTACCCAAGCCCTCCGAAGACTCGGTCATCTTCGTGTGCGGACCACCG
GGCATGATGAACGCCATTTCCGGGCCCAAGAACGAAGACAAGAGCCAAGG
CGAAATCGGCGGGGTGCTTAAGGGGCTAGGCTACACCTCCGACATGGTCT
ACAAGTTCTGA
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