|
|
Homology
BLAST of mRNA_Ecto-sp8_S_contig1040.649.1 vs. uniprot
Match: A0A6H5L805_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L805_9PHAE) HSP 1 Score: 862 bits (2228), Expect = 1.590e-304 Identity = 621/745 (83.36%), Postives = 630/745 (84.56%), Query Frame = 1
Query: 88 MALVDTQGFVMAVDRSLFGPQGRRWIERKLPNVATNIAFVAVSAFGACVLVFHITREYYKSGYWAILQTPKHILNAAVLHLVARALRWHIDRMLGVNFAAGDEALPDFFASTTLDGEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHNHSRAPQQPKQDRGDSVEESTTDQEQLGXXXXXXXXXXXXNHLRSRSADMTSXXXXXXXXXXXXXXXXXXXXXXXXDSLGRSASSLSLPESARPGWEQGRRSWRRSSSRLDSSSGLGGGLAGSDRERGENAAGAPEXXXXXXXXXXXXXXXXX--TFPDLFGACRPSHHERHRRRERSLSSPPSSPSATLEPTRPSSVGRNRXXXXXXXXXXXXXRRRLSLEVPRTAADRWVDEGGNYEAGEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKPSSLPQVGASAAAXXXXXMETGEEHVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSGRDAXXXXXXRSSSRRWRSIDKLSRALGSTRRRTSRQGGAARGEGGEGSEQQKMNFFTEKDLDELLHSTFFIKMCDDASWLYVEDHPFQPELNWLLSLWGGYKIAPRFQGEVKQNEAHRMLFQAENGRHRGHVRIRSRATNTFLFFLGIKQPLTWVAWDRDVVGGEWEDLKLEWVGKPQGPDGVLVGDERGRVVIRSRPMKGYVSWNGSRFTHVPGREGATVFMLQRMAPS 2316
MALVDTQGFVMAVDRSLFGPQGRRWIERKLPNVATN+AFVAVSAFGAC+LVFHITREYY SGYWAILQTPKHILNA VLHLVARALRWHIDRMLGVNFAAGDEALPDFF STTLDGEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX SR P QPKQ R DSVEEST DQEQ G XXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXDSLGRSASSLSLPESARPGWEQGRRSWRRSS+RLD S GL G AGSD+ERGENAAGA + XXXXXXXX TFPDLFGACRPSHHERHRRRERSLSSPPSSPSATLE TRPSSVGRNRXXXXXXXX RRRLSLEVPRTAADRWVDEGGNY AG+E XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX SLPQVGASAAA +E G+ VE XXXXXXXXXX GS RD XXXXXX S+ RWRSIDKLSRALGSTRRRTSRQGGAARGEGGEGSE QKMNFFTEKDLDELLHSTFFIKMCDDASWLYVEDHPFQPELNWLLSLWGGYKIAPRFQGEVKQNEAHRMLFQAENGRHR HVRIRSRATNTFLFFLGIKQPLTWVAWDRDVVGGEWEDLKLEWVGKPQGPDGVLVGDERGRVVIRSRPMKGYVSWNGSRFTHVPGREGATVFMLQRMAPS
Sbjct: 1 MALVDTQGFVMAVDRSLFGPQGRRWIERKLPNVATNLAFVAVSAFGACLLVFHITREYYTSGYWAILQTPKHILNAVVLHLVARALRWHIDRMLGVNFAAGDEALPDFFGSTTLDGEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRTPPQPKQGRRDSVEESTIDQEQFGWSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSLGRSASSLSLPESARPGWEQGRRSWRRSSNRLDGS-GLADGFAGSDKERGENAAGALDDXXXXXXXXNHSRGDREKHTFPDLFGACRPSHHERHRRRERSLSSPPSSPSATLESTRPSSVGRNRXXXXXXXXPSPR-RRRLSLEVPRTAADRWVDEGGNYGAGKEQRRAAGADGAARQSGCASDDGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------SLPQVGASAAAGAAGEVEAGKGDVEEKEGGGRNGAKTSVAXXXXXXXXXXTGLSGSWRDGXXXXXXXXSNSRWRSIDKLSRALGSTRRRTSRQGGAARGEGGEGSE-QKMNFFTEKDLDELLHSTFFIKMCDDASWLYVEDHPFQPELNWLLSLWGGYKIAPRFQGEVKQNEAHRMLFQAENGRHRDHVRIRSRATNTFLFFLGIKQPLTWVAWDRDVVGGEWEDLKLEWVGKPQGPDGVLVGDERGRVVIRSRPMKGYVSWNGSRFTHVPGREGATVFMLQRMAPS 735
BLAST of mRNA_Ecto-sp8_S_contig1040.649.1 vs. uniprot
Match: D8LSC8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSC8_ECTSI) HSP 1 Score: 494 bits (1271), Expect = 1.570e-164 Identity = 381/439 (86.79%), Postives = 384/439 (87.47%), Query Frame = 1
Query: 778 DSLGRSASSLSLPESARPGWEQGRRSWRRSSSRLDSSSGLGGGLAGSDRERGENAAGAPEXXXXXXXXXXXXXXXXXTFPDLFGACRPSHHERHRRRERSLSSPPSSPSATLEPTRPSSVGRNRXXXXXXXXXXXXXRRRLSLEVPRTAADRWVDEGGNYEAGEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKPSSLPQVGASAAAXXXXXMETGEEHVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-GSGRDAXXXXXXRSSSRRWRSIDKLSRALGSTRRRTSRQGGAARGEGGEGSEQQKMNFFTEKDLDELLHSTFFIKMCDDASWLYVEDHPFQPELNWLLSLWGGYKIAPRFQGEVKQNEAHRMLFQAENGRHRGHVRIRSRATNTFLFFLGIKQPLTWV 2091
DSLGRSASSLSLPESARPGWEQ RRS RRSSSRLDSS GL GGLAGSD+ERG+NAAGA +XXXXXXXXXXXXXXXXXTFPDLFGACRPSHHERHRRRERSLSSPPSSPSATLEPTRPSSVGRNRXXXXXXXXXXXX RRRLSLEVPRTAADRWVDEGGNY AGEE XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX KPSSLPQ GAS XXXXX ETGEEH XXXXXXXXXXXXXXXXXXXXXXXX GSGRD RSSSRRWRSIDKLSRALGSTRRRTSRQGGAARGEGGEGSE QKMNFFTEKDLDELLHSTFFIKMCDDASWLYVEDHPFQPELNWLLSLWGGYKIAPRFQGEVKQNEAHRMLFQAENGRHRGHVRIRSRATNTFLFFLGIKQPLTWV
Sbjct: 28 DSLGRSASSLSLPESARPGWEQRRRSCRRSSSRLDSS-GLDGGLAGSDKERGDNAAGALDXXXXXXXXXXXXXXXXXTFPDLFGACRPSHHERHRRRERSLSSPPSSPSATLEPTRPSSVGRNRXXXXXXXXXXXX-RRRLSLEVPRTAADRWVDEGGNYGAGEEQQRVAGAGGAARQIGCTSDDGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----KPSSLPQAGASXXXXXXXXXETGEEHXXXXXXXXXXXXXXXXXXXXXXXXXXSATELSGSGRDVGGSGGGRSSSRRWRSIDKLSRALGSTRRRTSRQGGAARGEGGEGSE-QKMNFFTEKDLDELLHSTFFIKMCDDASWLYVEDHPFQPELNWLLSLWGGYKIAPRFQGEVKQNEAHRMLFQAENGRHRGHVRIRSRATNTFLFFLGIKQPLTWV 459
BLAST of mRNA_Ecto-sp8_S_contig1040.649.1 vs. uniprot
Match: A0A835ZHV2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHV2_9STRA) HSP 1 Score: 164 bits (414), Expect = 1.680e-39 Identity = 91/205 (44.39%), Postives = 123/205 (60.00%), Query Frame = 1
Query: 1702 LGSTRRRTSRQGGAARGEGGEGSEQQKMNFFTEKDLDELLHSTFFIKMCDDASWLYVEDHPFQPE----LNWLLSLWG-GYKIAPRFQGEVKQNEAHRMLFQAENGRHRGHVRIRSRATNTFLFFLGIKQPLTWVAWDRDVVGGEWEDLKLEWVGKPQGPDGVLVGDERGRVVIRSRPMKGYVSWNGSRFTHVPGREGATVFMLQ 2301
L + RRR R GG RG EG + FT EL+ S FF+++ DD SW+YVE +QP+ L W ++L+ GYK+ R+ G+V ++A+RMLFQ E GR GHV +RSR TNT LF LG+++P T VAWDR+V GG+WED+++EW + G VVI + GY+ W G RF HV R+ A+ FMLQ
Sbjct: 318 LATARRRRRRHGGIERGRS-EGGLDLQPYLFTRATAHELMDSLFFMRVVDDDSWVYVEHDLYQPQEGAGLGWAMNLFHRGYKVGVRYAGDVDPHDANRMLFQCEPGRASGHVWLRSRGTNTLLFMLGLRKPRTLVAWDREVPGGDWEDMRIEWC-----------PEHNGHVVISCKRAGGYLQWTGDRFGHVDERDCASRFMLQ 510
BLAST of mRNA_Ecto-sp8_S_contig1040.649.1 vs. uniprot
Match: A0A835YVS8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVS8_9STRA) HSP 1 Score: 161 bits (407), Expect = 4.840e-38 Identity = 78/178 (43.82%), Postives = 118/178 (66.29%), Query Frame = 1
Query: 1792 FTEKDLDELLHSTFFIKMCDD-ASWLYVEDHPFQPE----LNWLLSLWG-GYKIAPRFQGEVKQNEAHRMLFQAENGRHRGHVRIRSRATNTFLFFLGIKQPLTWVAWDRDVVGGEWEDLKLEWVGKPQGPDGVLVGDERGRVVIRSRPMKGYVSWNGSRFTHVPGREGATVFMLQRM 2307
FT + ELL S FFIK+ D+ +W++VED + L W +SL+ GY++ R+ G+V ++AHR++FQ E GR GHVRIRSR +NT+LF LG+++PLT VAWDR+V GG+WED+++ W+ + ++ GRV+IR + GY+ W G++F H P ++ A+ FMLQ +
Sbjct: 432 FTAETAHELLDSMFFIKLVDEEGAWMFVEDDLHESREGGGLGWAMSLFHRGYRVGARYAGDVGPHDAHRLVFQCEPGRAAGHVRIRSRGSNTYLFMLGLRRPLTLVAWDREVAGGDWEDMRIVWLPR---------AEDEGRVLIRCKTAGGYLQWTGTKFVHTPVKDSASRFMLQSL 600
BLAST of mRNA_Ecto-sp8_S_contig1040.649.1 vs. uniprot
Match: D8LSC9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSC9_ECTSI) HSP 1 Score: 105 bits (263), Expect = 1.580e-23 Identity = 49/52 (94.23%), Postives = 50/52 (96.15%), Query Frame = 1
Query: 247 ITREYYKSGYWAILQTPKHILNAAVLHLVARALRWHIDRMLGVNFAAGDEAL 402
ITREYYKSGYWAILQTPKHILNA VLHLVARALRWHIDRMLGVNFAAGDE +
Sbjct: 9 ITREYYKSGYWAILQTPKHILNAVVLHLVARALRWHIDRMLGVNFAAGDEGM 60
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Stop | 0 |
| Start | 1 |
| Model size | 2418 |
| Hectar predicted targeting category | signal anchor |
| Exons | 8 |
| Ec32 ortholog description | expressed unknown protein |
| Ec32 ortholog | Ec-21_003220.1 |
| Cds size | 2331 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1681143139.3957026-CDS-Ecto-sp8_S_contig1040:3101..3428 | 1681143139.3957026-CDS-Ecto-sp8_S_contig1040:3101..3428 | Ectocarpus species8 EcLAC_412 | CDS | Ecto-sp8_S_contig1040 3102..3428 - |
| 1681143139.4066272-CDS-Ecto-sp8_S_contig1040:4564..4699 | 1681143139.4066272-CDS-Ecto-sp8_S_contig1040:4564..4699 | Ectocarpus species8 EcLAC_412 | CDS | Ecto-sp8_S_contig1040 4565..4699 - |
| 1681143139.4172616-CDS-Ecto-sp8_S_contig1040:5368..5548 | 1681143139.4172616-CDS-Ecto-sp8_S_contig1040:5368..5548 | Ectocarpus species8 EcLAC_412 | CDS | Ecto-sp8_S_contig1040 5369..5548 - |
| 1681143139.4276483-CDS-Ecto-sp8_S_contig1040:6177..6707 | 1681143139.4276483-CDS-Ecto-sp8_S_contig1040:6177..6707 | Ectocarpus species8 EcLAC_412 | CDS | Ecto-sp8_S_contig1040 6178..6707 - |
| 1681143139.4379506-CDS-Ecto-sp8_S_contig1040:7229..7896 | 1681143139.4379506-CDS-Ecto-sp8_S_contig1040:7229..7896 | Ectocarpus species8 EcLAC_412 | CDS | Ecto-sp8_S_contig1040 7230..7896 - |
| 1681143139.4477248-CDS-Ecto-sp8_S_contig1040:8202..8385 | 1681143139.4477248-CDS-Ecto-sp8_S_contig1040:8202..8385 | Ectocarpus species8 EcLAC_412 | CDS | Ecto-sp8_S_contig1040 8203..8385 - |
| 1681143139.4572136-CDS-Ecto-sp8_S_contig1040:8914..9064 | 1681143139.4572136-CDS-Ecto-sp8_S_contig1040:8914..9064 | Ectocarpus species8 EcLAC_412 | CDS | Ecto-sp8_S_contig1040 8915..9064 - |
| 1681143139.4672184-CDS-Ecto-sp8_S_contig1040:10819..10978 | 1681143139.4672184-CDS-Ecto-sp8_S_contig1040:10819..10978 | Ectocarpus species8 EcLAC_412 | CDS | Ecto-sp8_S_contig1040 10820..10978 - |
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1681143139.4774613-UTR-Ecto-sp8_S_contig1040:10978..11065 | 1681143139.4774613-UTR-Ecto-sp8_S_contig1040:10978..11065 | Ectocarpus species8 EcLAC_412 | UTR | Ecto-sp8_S_contig1040 10979..11065 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig1040.649.1 >prot_Ecto-sp8_S_contig1040.649.1 ID=prot_Ecto-sp8_S_contig1040.649.1|Name=mRNA_Ecto-sp8_S_contig1040.649.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=777bp
MALVDTQGFVMAVDRSLFGPQGRRWIERKLPNVATNIAFVAVSAFGACVL VFHITREYYKSGYWAILQTPKHILNAAVLHLVARALRWHIDRMLGVNFAA GDEALPDFFASTTLDGEGGGGGPDNNGNGSNSNRGSSNSNSKPAVLWPWQ SSSHNHSRAPQQPKQDRGDSVEESTTDQEQLGWWGGGGDGRRGSNHLRSR SADMTSAETAAAAGEAAIQEDDDDDDGGGGDSLGRSASSLSLPESARPGW EQGRRSWRRSSSRLDSSSGLGGGLAGSDRERGENAAGAPEDDDDDDHSRG GRENHHHTFPDLFGACRPSHHERHRRRERSLSSPPSSPSATLEPTRPSSV GRNRNRGRDRQPPRPPPRRRLSLEVPRTAADRWVDEGGNYEAGEEQRRAA GAGGAARQSGCTSDDGGAGGHGAGSRGSRRRLRRLTGNNNNNNNNNNNNN NNNKPSSLPQVGASAAAGAAGGMETGEEHVEEKEGEGRKGAKASVAAAVV AATASATGLSGSGRDAGGSGGGRSSSRRWRSIDKLSRALGSTRRRTSRQG GAARGEGGEGSEQQKMNFFTEKDLDELLHSTFFIKMCDDASWLYVEDHPF QPELNWLLSLWGGYKIAPRFQGEVKQNEAHRMLFQAENGRHRGHVRIRSR ATNTFLFFLGIKQPLTWVAWDRDVVGGEWEDLKLEWVGKPQGPDGVLVGD ERGRVVIRSRPMKGYVSWNGSRFTHVPGREGATVFMLQRMAPSSSSSSGA TRSSSSSRRTRRGGGDGGGGGGSRGGG back to topmRNA from alignment at Ecto-sp8_S_contig1040:3102..11065- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_Ecto-sp8_S_contig1040.649.1 ID=mRNA_Ecto-sp8_S_contig1040.649.1|Name=mRNA_Ecto-sp8_S_contig1040.649.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=7964bp|location=Sequence derived from alignment at Ecto-sp8_S_contig1040:3102..11065- (Ectocarpus species8 EcLAC_412) GCCGACAGCAAAGAGGGACTTGGCCGTGGGCATCTCTCTCCAGCAAGACC
GCGTCGAGCACAGCAGTGACAGCGGAGCCGAGCCAAGATGGCGTTGGTCG
ATACGCAAGGGTTCGTCATGGCGGTGGACCGGTCGCTGTTCGGCCCGCAG
GGCAGGCGGTGGATAGAGCGAAAGCTACCCAACGTCGCGACCAACATCGC
TTTCGTCGCGGTGTCGGCGTTTGGGGCATGTGTGCTGGTCTTCCACGTGA
GTAGGGGGGGGGGGGGGGGGGGGGGGGGTTTTTAGAATAAGGGGGGGAGG
GGGGGGGGAGGAAGAGGGGGGGGGGAAAAAAGGGGAGCGGGGGGGTGGCC
CGCGNNNNNNNNNNTTGCTTGGCGTGCTGTGGGCGTGGGTGGTGGTTGGG
GGGTGGTGTGTTGGTGGGTTGTTTCCGGGGGGTGAGGGGGGGGGGGGGGG
GGGGGGGGGGGGGGGGGCGTGTTATAGATGATTAGAGGGTAAGGAGGGGT
GCAGAGAATCGGCAGGGTGCAAAACCGTGCAGCGGTGCTGTCGCCTGCGG
AAGATAGCCCAACGCCCAACACAAAAGTAGCAAACACACAGATGCCAACA
TAGAAGTATGAATGTACAACCATCGGGGCACGCAACATCAACGTCGTACC
CCCGCGAGAATTCCTCAACGGGATGCTTTGAATCTTCCCCATTGCGTGGA
AAGTGGTTGACGTCGGTCGTAGGTTGGACTAAGCGGGGTGCGCCCTCGTG
TAGGTGCCTTAGTTCGGAAGAAGACTACATACTACCTGAGAGATTATGCA
TACAATGTATGTAGACTTATGCATACAATCATGTCTGCTGTTGTACGTAT
GCATGTGTATACAATATGTAGCATCAGGCGTTAGGTTCTCGGCAAGAGGT
TGCAGTATCCAGTTATATCCAGGGTTGGTTATAAGAGGAACACCGGTACC
GTCGCGCCCCACCACACCCGCACTGGCCCAAACTGACACTGATGCCTTCT
ACGGTCAAACGACGAACGACCTAAGAAGATACGTAAAAGACAAGAAGGGC
GAGGACCCAGAAACATTCCTGACCTACAGCAGTACCAATCGGAAGAATCT
TGTTGGTACGAGTAGCCATCAACGAGCAATCAACTAGGGAGCCACTAGTT
TCGACGTTGTCCCTTAGTTAGACTCCACTCTCCGCCGGGTACGCCGTATT
CAGATTTTCAAACCAGTTCATGCAAGGGTGAAGGTTGTGTAGCATTGTAC
GTGGAGGAGCTCTGGAATTTCGCAGCATTCTCAGACTAAACAGACGGTCT
CTTACACTGCTGTACATTCAGAAATTGGCGTAGTTCCCGAAATGGGAAAA
AAACACAGAGGCGTCGACGAACCTCGGCGCGTTCACATGGCCGACGCCTC
GTGCCGTGTTAAGCAGAGCACGCAGCTACGCCACCATCATCGTGCAAATC
GTCGCAGCAGTTGTCGGTGGGGGAACTGTGAGAGAGGGAACGCTGTCCGT
CCTCTCAACCAGCCAACAAACACGCATGCCACGGGGAGACAAAAGCAATC
AATCCAACGAGAAGAGCGGGCAGGGCTCATTGGCGGCAGTAGCCTTCACG
CAAGGTTTTTCATTTTTCGTGTTATGTAAACATGTTGGATAAAGCATACA
ATCGGGGAAGTTGGGTTAGGGTTTGTGTTAGGGCATAGGGTCTGCGTCCC
CCCTCCCTGGTCTATTTCCTCATATGCGTATCTATCGCGCGAAGGCGGTC
CGTTGGCGGTCTGCACCCTACACCGGTAGTCTTGAGGTTTTAAGGAAAAA
TAAACATTTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCACGCACGCA
CGCTTGTTCACCAGGCGATTTCCTGCTTGGAAGGTTGGAACTCGATTATG
TTACTTGCGCGTACATTACATTTCCTTCGAAAGAATATCATCCCGACGAA
TGTCCTCGTCACTCCCGAGGTAATTGTATGCCATCCATTGCTTCTTTGCA
GATCACCCGCGAGTACTACAAGTCCGGCTACTGGGCCATCCTCCAGACCC
CGAAGCACATTCTCAACGCCGCGGTTCTGCACCTAGTGGCTCGGGCCCTG
CGGTGGCACATCGACCGAATGCTCGGGGTCAACTTCGCGGCAGGAGACGA
GGTATAATAGCCGTTTTTCGCCTGTGCCGTGCGGTGCTATTTATTGCCGT
GGAGACCCCTTCGATGACCCTCAGTAGTTTACAGGAATGCTGCTGATTAT
TGGTGTTGTCGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTGTTTG
TCGTTGCCAAAATCTGAGCTTGACCGCAGTCGCTCGTACTCGGAGTCTGG
CGTTGACGCTCTGCGAACGGTTTCGCCCTGCGGGGGATGAACAGCTGGCG
AGTTGAGTACGGAATGCTGGGCCCTAGTCTTGGTCATGGCATCTTAGCGC
ATTCCCGCATTAGCCGCCTACCGAGAGCAAGCATGCGCTCAATCGAACCC
AGCTCCAAAACGCCATGACACAACAGAGACTCCCCGTGCCATCAGCAAAC
CATTTCTTACTAACGGCGAACACGTTCAAGGATGTGCAACCAACCGTGGT
CCGATTCGATGGTGTTGCTGCTGTTGCCCCTCCACCCCGCCGGTCTTCAT
ATTTTTACACCCACGCGCGCACCCTTAAAGGCCCTGCCCGACTTCTTCGC
ATCAACGACCCTGGATGGAGAGGGCGGAGGAGGCGGCCCCGACAACAATG
GCAACGGCAGCAACAGCAACAGGGGTAGCAGCAACAGCAACAGCAAGCCG
GCGGTCTTGTGGCCGTGGCAATCGTCGTCGCACAATCACTCCCGCGCTCC
GCAGCAGCCGAAGGTAGGAGAAAAGGTCGTTGTACATGTCGGGATGAAAC
AGGAGAGCTAGCTTTTTTGTACGAGCAGCGTTCTGGTATGTGTTAGCAAG
CACACGGGTGCGAGGAGCACGACTTGGAACGCTTGCTCGCCCCGAAGGCC
TTGTGTTTCAAGGGAGGATTTGCCGGGAGACTTTGGGGGTGACGTTGCGG
AAAACATGTGGGTGTGTACATCCGACCCCATCGCTCTTGACGCTCTCAGA
ATACCCCCCCCCCCCGGTACGAACGTTTTTCAAGCGCGTGTCCCCCCCTC
CCCGCCGCCTTGTGTGCAGCAAGACCGTGGGGACTCGGTGGAGGAGTCTA
CCACCGACCAGGAGCAGCTCGGCTGGTGGGGCGGCGGCGGCGACGGCCGC
CGCGGCAGCAACCACCTGAGATCGCGCAGCGCGGACATGACGTCTGCGGA
GACAGCGGCAGCGGCCGGCGAAGCAGCCATCCAAGAGGACGACGACGACG
ATGACGGCGGCGGCGGCGACAGCCTGGGCAGGTCGGCCTCGTCCTTGTCC
CTGCCGGAGTCGGCGCGGCCGGGGTGGGAGCAGGGACGGAGATCGTGGCG
GAGAAGCAGCAGCCGGCTGGACAGCAGTAGTGGTCTCGGTGGCGGCCTCG
CCGGCAGCGACAGGGAGAGGGGCGAGAACGCCGCCGGCGCCCCCGAAGAC
GACGACGACGACGATCACAGCCGCGGCGGCCGTGAGAACCACCACCACAC
CTTTCCGGACCTGTTCGGGGCCTGCCGCCCCAGCCACCACGAACGCCACC
GCCGCCGCGAGAGGTCGCTCTCGTCCCCGCCGTCTTCGCCGTCGGCGACG
CTGGAGCCGACCAGGCCGTCCTCGGTCGGCCGAAACCGCAACCGCGGCCG
TGACAGACAGCCCCCCCGCCCCCCCCCCCGCCGCCGCCTCTCGCTCGAGG
TCCCTCGCACCGCCGCCGACCGTTGGGTCGACGAAGGTACAGACAGCGTG
CCGTTTTTCGCTGTGTCTTTTTTTAGTTGCTCTTGGTTTCTGCAACTGCC
GTGAAGTACGCGCAGCAAAGAGGGAAGGAACGGCTGAGCCCTTTCCCGGG
GTTGAAGGCAAGCACCGCAGGAGAAACAGCGGGGGGGGGGTGTCTCCTGC
GTTACCCCGGCTGGTGCGCCAAACATGCGCACCGAGACGTAGACTGGCGC
CCAGAATACGTTGGGCGGGGAAAAACAAACGGAGCGGTGGGATTTCGTCT
GCCATGTTTCGTTGTACGTTCGTTTGTATAGGTTCAGCTTGTGTCCGCGG
GAGCTCGCCTGCTTGGCCTTTACACGAGACCCCCTGATTACCCCTCTTTG
AACCATTATGTTGAGCAATCGTGTGATCACTCCGTGCTCCTACGTTAAGG
ATGATTTATCGTGTTTTTTTGCGATCGCGCGATCGTCACGTACGCTTACG
CTTTTACCCCTGCGTTTTGAATCCCGAAAAAAAATAAACGTATATCGGGG
GAAAAAAGGTGGCAACTACGAAGCCGGGGAGGAGCAGCGAAGAGCCGCGG
GGGCAGGCGGGGCCGCGAGGCAGAGCGGCTGTACATCGGACGACGGGGGC
GCCGGCGGGCACGGGGCGGGCTCGCGCGGGAGCCGCCGGCGCTTGCGGAG
GCTCACCGGCAACAACAACAACAACAACAACAACAACAACAACAACAACA
ACAACAACAAGCCCTCGTCCTTGCCCCAAGTCGGGGCGTCTGCCGCCGCA
GGAGCGGCCGGGGGGATGGAGACGGGGGAGGAGCACGTGGAGGAGAAGGA
GGGGGAGGGTAGGAAGGGAGCGAAAGCTTCGGTGGCGGCGGCGGTCGTGG
CGGCGACGGCCTCAGCGACAGGGCTCTCGGGGAGCGGACGCGATGCGGGC
GGGAGCGGCGGGGGGAGGAGCAGCAGCAGGCGGTGGAGGTCCATCGACAA
GCTGTCGCGGGCGCTCGGTTCCACCCGCCGGCGCACGTCGCGCCAGGGCG
GGGCCGCCAGGGGAGAGGGGGGAGAAGGGAGTGAGCAGGTAGTTTCTGCT
TTGGTTTTGGATTTTTTGTGAATCATTTTTCGTCTCTGTGGTTGCCGTTT
GTGTGTCGCTACATAGTTCGAGAGGGTTTTACCGCCAAGCTGGAGGTGCG
CCTGAGGGTACAGGTGGCAATGGCGACATCTGCGGCGAGAAGATGTTTTG
TTGTGTTTAAATTTTTTGCCGTGTTGTTGCTCCTCGCACCTTTCTCCTGT
TTACGTCCGTCACCAAACGTATGCCGTAGCTCGTATCTGCGTATCTGTCG
GGGGTTGCGCGATGGAGGTGGGTCTTGTTGCCGCCCATGGTGCCGCTAAA
ACGACTGATGATGCTGTCGATGCCGTCGACGCGAATTTGTCCCAGGCTTA
GGCGTTGACTTCGAGATCACACGTTTCAATCCCCTGAAAAATGTTTATCT
CACCATGTGTGTTTGGACATCCCGGCGATAAATGATTTCCACATGACACT
ATTCGAATTCATCAAGCACCCGCTCGATTCTCTCACCACCATGTGTGATT
AATTTGGACATCCCAGCAAGTTTTTTTCTATCAAGCGTATGACCGCTCTT
CTTGCACCGCACCAAGAGGTTCAGCGTGCCGTACCCCCCCCCCCTTCCCT
CCCTCCCAACCCATGAGCAGAAGATGAACTTTTTCACCGAGAAGGACCTC
GACGAGCTGCTGCACAGCACGTTCTTCATCAAGATGTGCGACGACGCGTC
TTGGCTGTACGTGGAGGACCACCCCTTCCAGCCGGAGCTGAACTGGCTGC
TTTCGTTGTGGGGAGGTTACAAGATCGCTCCGAGGTTCCAGGGGGAGGTG
CGGCAGATATATGTGTGGTATGGTAAAGACAAAGGGGTGGACGTGGCCAA
GAGAGAGAGGTAGACCTCGCCAAGAGAGAGAGGTAGACCTGGCCAAGAGA
GAGAGGCAGGCATGGCAAAGAGAGAGAGGTAGACCTGGCCAAGAGAGAGA
GGCAGGCATGGCAAAGAGAGAGAGGTAGACCTGGCCAAGAGAGAGAGGTA
GACCTGGCCAAGAGAGAGAGGCAAGCATGGCAAAGAGAGAGAGGTAGACC
TGGCCAAGAGAGAGAGGCAGGCATGGCAAAGAGAGAGAGGTAGATGTGGT
AGAGACAGAGAGAGGCAGGCATGGCAACGAGATAGAGGTAGGCAGGCAAG
ACAGGTTGTTCATGAAACATATCCGTGCCAAATAGAAGCGCTCATGAAAA
TCACACCTCCTTGTGTGCAAATAGTGTGCGACAACCCCATCGGTAAGGGA
CACGTCGAGTGAAGTCCGATTGTGGGACGTGGAAAGTCGGTTGACAGAGT
CACCGTGATTCGTGCCCCTACGCACATGAGATCAAAGCAGTGTTCACTTT
GCCCGACTCACCCTCACCCTCTCGCGGTGAGGGTTGAAAGCGACCTCTAC
ACGAGCACTACACGCAGGGTTTGAGAGGAGAAACCGCAAACAATTTTTCT
CCCAAAAACGGAACAGGTGAAGCAGAACGAGGCCCACAGGATGCTCTTTC
AGGCCGAGAACGGGCGGCATCGAGGCCACGTCCGCATCCGGTCAAGAGCG
ACCAACACCTTTCTCTTCTTCCTCGGCATCAAGCAGCCTCTCACATGGGT
GGTGAGCTCTTTGCTAGTTGTAGTCGGTAGTCGTGGTGTTGGTGGTCGAC
TGGGTTTTGGTAGCTCGTCGAGGGGGCTGGCTGTTCGAGTGCGGTGCACC
GAGCAGCCTTTGTTCCCTCTTGTCGCTGGTTCCCCTCGGCTGTACCGTTC
ACCCCAACAGCAATCCCTAGACCCGGCCATGCGCGTGTGAGTCACCCGCG
TTTTCAGCTCCCCCTGGAACCGCAGCAGCAGCTGCCGCTAGCAGCACCGG
CACAGGCGGTAGGCGAAGCAGCAGATGTAGCCGTGGCCTTTTCTGCGTCC
TCTCTGGCGGGGTGTCCGACTTGGTATTACCTACACAGCTGGCTTGGAAT
CCGGGCCTGCATTTTTCTTCCTACAAGACCTCGATTGGTAGCCTGTGCAT
TTTCTTGAGTGGCATGTAGTTACAGTGCTCCCTTCTCCTGGCCTTCTTTT
CTATCTAGATTTTGTCACAGCCTAGAATACATGATATCATAAGAGAGCGA
ACGCGTTCGACTTCCCCAAGAACTTTCTTCGCGAGTTGGTCATGGGCAAC
ACGCAACGGTTGGTTAGGCCTCCAATGTCCAACTATCCCCTAGCTTGACG
GGTTCGTATGACAGCAACGGGGGAGGCGGCGGCTGAGGCCTCTACCCCCA
CCCACCCATCCGTTCGAGGTGACTGTAAGACCCACTTTTCCGTCCACCCG
TTGGATCCGGTTTCCGCCAGCCTCGCTTGCTGTTTCGCGTGAGAAGAGGT
ACGGGGGCACCGTCATGTGGTCTACGGAGGGTGGAGAATCACTCCGTCCC
CCGTCCCCGCCCGTCTCGACTATAGCAACGTACCCCTTTGAGAAAACGTT
GCTGTTATTCCCCTTCTTGGCTCCCGACAGTGTTCGTCCTAAGTAACCGG
TAAGGCGTTCGAATCCCCGAAAACTTGCAAAGTTTGTCCCTTGCCGCCGT
ACCGCCGTCCGCCGTTGCCGGGCACCGCCAAGACCCACGTACATGTACAC
GGCCACGAAACACACCCAAACAAGTGCCAAACTGTTTATGCCCCCACGGA
AGGTTGGTTTCGCGAAGAACGCTGTTTACAACGCCGCAAAACATGCTCGG
AAATCTAAAAGAATGAACAATAAAACGTTACATGTAGGCCTGGGACCGCG
ACGTGGTCGGAGGAGAATGGGAAGACCTCAAGCTGGAGTGGGTCGGTAAG
CCGCAGGGCCCGGATGGCGTCCTCGTCGGGGACGAGAGGGGCCGGGTCGT
GATCCGCTCCCGCCCCATGAAGGGCTACGTCTCGTGGAACGGGTCGCGGT
TCACCCACGTCCCGGGACGGGAGGGGGCCACGGTCTTCATGCTCCAGCGC
ATGGCCCCTTCATCTTCCTCCTCCTCGGGGGCGACGAGATCGTCGTCTTC
TTCTCGCCGGACGAGGCGAGGTGGGGGGGACGGTGGAGGCGGCGGCGGGA
GCAGGGGGGGGGGG back to topCoding sequence (CDS) from alignment at Ecto-sp8_S_contig1040:3102..11065- >mRNA_Ecto-sp8_S_contig1040.649.1 ID=mRNA_Ecto-sp8_S_contig1040.649.1|Name=mRNA_Ecto-sp8_S_contig1040.649.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=2331bp|location=Sequence derived from alignment at Ecto-sp8_S_contig1040:3102..11065- (Ectocarpus species8 EcLAC_412) ATGGCGTTGGTCGATACGCAAGGGTTCGTCATGGCGGTGGACCGGTCGCT GTTCGGCCCGCAGGGCAGGCGGTGGATAGAGCGAAAGCTACCCAACGTCG CGACCAACATCGCTTTCGTCGCGGTGTCGGCGTTTGGGGCATGTGTGCTG GTCTTCCACATCACCCGCGAGTACTACAAGTCCGGCTACTGGGCCATCCT CCAGACCCCGAAGCACATTCTCAACGCCGCGGTTCTGCACCTAGTGGCTC GGGCCCTGCGGTGGCACATCGACCGAATGCTCGGGGTCAACTTCGCGGCA GGAGACGAGGCCCTGCCCGACTTCTTCGCATCAACGACCCTGGATGGAGA GGGCGGAGGAGGCGGCCCCGACAACAATGGCAACGGCAGCAACAGCAACA GGGGTAGCAGCAACAGCAACAGCAAGCCGGCGGTCTTGTGGCCGTGGCAA TCGTCGTCGCACAATCACTCCCGCGCTCCGCAGCAGCCGAAGCAAGACCG TGGGGACTCGGTGGAGGAGTCTACCACCGACCAGGAGCAGCTCGGCTGGT GGGGCGGCGGCGGCGACGGCCGCCGCGGCAGCAACCACCTGAGATCGCGC AGCGCGGACATGACGTCTGCGGAGACAGCGGCAGCGGCCGGCGAAGCAGC CATCCAAGAGGACGACGACGACGATGACGGCGGCGGCGGCGACAGCCTGG GCAGGTCGGCCTCGTCCTTGTCCCTGCCGGAGTCGGCGCGGCCGGGGTGG GAGCAGGGACGGAGATCGTGGCGGAGAAGCAGCAGCCGGCTGGACAGCAG TAGTGGTCTCGGTGGCGGCCTCGCCGGCAGCGACAGGGAGAGGGGCGAGA ACGCCGCCGGCGCCCCCGAAGACGACGACGACGACGATCACAGCCGCGGC GGCCGTGAGAACCACCACCACACCTTTCCGGACCTGTTCGGGGCCTGCCG CCCCAGCCACCACGAACGCCACCGCCGCCGCGAGAGGTCGCTCTCGTCCC CGCCGTCTTCGCCGTCGGCGACGCTGGAGCCGACCAGGCCGTCCTCGGTC GGCCGAAACCGCAACCGCGGCCGTGACAGACAGCCCCCCCGCCCCCCCCC CCGCCGCCGCCTCTCGCTCGAGGTCCCTCGCACCGCCGCCGACCGTTGGG TCGACGAAGGTGGCAACTACGAAGCCGGGGAGGAGCAGCGAAGAGCCGCG GGGGCAGGCGGGGCCGCGAGGCAGAGCGGCTGTACATCGGACGACGGGGG CGCCGGCGGGCACGGGGCGGGCTCGCGCGGGAGCCGCCGGCGCTTGCGGA GGCTCACCGGCAACAACAACAACAACAACAACAACAACAACAACAACAAC AACAACAACAAGCCCTCGTCCTTGCCCCAAGTCGGGGCGTCTGCCGCCGC AGGAGCGGCCGGGGGGATGGAGACGGGGGAGGAGCACGTGGAGGAGAAGG AGGGGGAGGGTAGGAAGGGAGCGAAAGCTTCGGTGGCGGCGGCGGTCGTG GCGGCGACGGCCTCAGCGACAGGGCTCTCGGGGAGCGGACGCGATGCGGG CGGGAGCGGCGGGGGGAGGAGCAGCAGCAGGCGGTGGAGGTCCATCGACA AGCTGTCGCGGGCGCTCGGTTCCACCCGCCGGCGCACGTCGCGCCAGGGC GGGGCCGCCAGGGGAGAGGGGGGAGAAGGGAGTGAGCAGCAGAAGATGAA CTTTTTCACCGAGAAGGACCTCGACGAGCTGCTGCACAGCACGTTCTTCA TCAAGATGTGCGACGACGCGTCTTGGCTGTACGTGGAGGACCACCCCTTC CAGCCGGAGCTGAACTGGCTGCTTTCGTTGTGGGGAGGTTACAAGATCGC TCCGAGGTTCCAGGGGGAGGTGAAGCAGAACGAGGCCCACAGGATGCTCT TTCAGGCCGAGAACGGGCGGCATCGAGGCCACGTCCGCATCCGGTCAAGA GCGACCAACACCTTTCTCTTCTTCCTCGGCATCAAGCAGCCTCTCACATG GGTGGCCTGGGACCGCGACGTGGTCGGAGGAGAATGGGAAGACCTCAAGC TGGAGTGGGTCGGTAAGCCGCAGGGCCCGGATGGCGTCCTCGTCGGGGAC GAGAGGGGCCGGGTCGTGATCCGCTCCCGCCCCATGAAGGGCTACGTCTC GTGGAACGGGTCGCGGTTCACCCACGTCCCGGGACGGGAGGGGGCCACGG TCTTCATGCTCCAGCGCATGGCCCCTTCATCTTCCTCCTCCTCGGGGGCG ACGAGATCGTCGTCTTCTTCTCGCCGGACGAGGCGAGGTGGGGGGGACGG TGGAGGCGGCGGCGGGAGCAGGGGGGGGGGG back to top
|