mRNA_Ecto-sp8_S_contig10385.627.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig10385.627.1 vs. uniprot
Match: A0A6H5KRJ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRJ9_9PHAE) HSP 1 Score: 355 bits (912), Expect = 1.250e-120 Identity = 187/190 (98.42%), Postives = 187/190 (98.42%), Query Frame = 3
Query: 51 MEFLRVVEEELRGLAAEARRRHPVVQEAAERAILKLRNMREEYAVALRQQHEGNAPPLSMFRSQDLLRPFLLACNHADASPHLMIMAMGSIQYLINRDAILPSDAPNILRVLAIQSQSKDADVQKRVLQTMVMVVTWKSCDMTEDTVAQALGVCLGLHDAKNAMVRTAADMTVRQIISLLFGRVADELGV 620
MEFLRVVEEELRGLAAEARRRHPVVQEAAERAILKLRNMREEYAVALRQQHEGNAPPLSMFRSQDLLRPFLLACNHADASPHLM MAM SIQYLINRDAILPSDAPNILRVLAIQSQSKDADVQKRVLQTMVMVVTWKSCDMTEDTVAQALGVCLGLHDAKNAMVRTAADMTVRQIISLLF RVADELGV
Sbjct: 1 MEFLRVVEEELRGLAAEARRRHPVVQEAAERAILKLRNMREEYAVALRQQHEGNAPPLSMFRSQDLLRPFLLACNHADASPHLMTMAMDSIQYLINRDAILPSDAPNILRVLAIQSQSKDADVQKRVLQTMVMVVTWKSCDMTEDTVAQALGVCLGLHDAKNAMVRTAADMTVRQIISLLFDRVADELGV 190
BLAST of mRNA_Ecto-sp8_S_contig10385.627.1 vs. uniprot
Match: D8LQH8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQH8_ECTSI) HSP 1 Score: 360 bits (924), Expect = 1.410e-111 Identity = 189/190 (99.47%), Postives = 189/190 (99.47%), Query Frame = 3
Query: 51 MEFLRVVEEELRGLAAEARRRHPVVQEAAERAILKLRNMREEYAVALRQQHEGNAPPLSMFRSQDLLRPFLLACNHADASPHLMIMAMGSIQYLINRDAILPSDAPNILRVLAIQSQSKDADVQKRVLQTMVMVVTWKSCDMTEDTVAQALGVCLGLHDAKNAMVRTAADMTVRQIISLLFGRVADELGV 620
MEFLRVVEEELRGLAAEARRRHPVVQEAAERAILKLRNMREEYAVALRQQHEGNAPPLSMFRSQDLLRPFLLACNHADASPHLMIMAMGSIQYLINRDAILPSDAPNILRVLAIQSQSKDADVQKRVLQTMVMVVTWKSCDMTEDTVAQALGVCLGLHDAKNAMVRTAADMTVRQIISLLF RVADELGV
Sbjct: 1 MEFLRVVEEELRGLAAEARRRHPVVQEAAERAILKLRNMREEYAVALRQQHEGNAPPLSMFRSQDLLRPFLLACNHADASPHLMIMAMGSIQYLINRDAILPSDAPNILRVLAIQSQSKDADVQKRVLQTMVMVVTWKSCDMTEDTVAQALGVCLGLHDAKNAMVRTAADMTVRQIISLLFDRVADELGV 190
BLAST of mRNA_Ecto-sp8_S_contig10385.627.1 vs. uniprot
Match: A0A835YQS4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQS4_9STRA) HSP 1 Score: 230 bits (587), Expect = 2.830e-66 Identity = 130/230 (56.52%), Postives = 158/230 (68.70%), Query Frame = 3
Query: 51 MEFLRVVEEELRGLAAEARRRHPVVQEAAERAILKLRNMREEYAVALRQQHEGNAPPLSMFRSQDLLRPFLLACNHADASPHLMIMAMGSIQYLINRDAILPSDAPNILRVLAIQSQSKDADVQKRVLQTMVMVVTWKSCDMTEDTV------------------------------------------AQALGVCLGLHDAKNAMVRTAADMTVRQIISLLFGRVADEL 614
MEFLRV+E EL+GL+ EA+R++P V EA+ERAIL+LR MRE+YA ALR+ G APPLSMFRSQDLLRPFLLACNH+DA L+ MA+GS+Q+LINRDA+ P+DAPN++RVLAIQ+ S DVQ RVLQT+VMVVTW C+M+E+T AQALGVCL LH+AKN VR AA MTVRQI+SLLF RV D++
Sbjct: 1 MEFLRVIEGELQGLSGEAKRKYPEVTEASERAILRLRGMREQYATALRRSG-GEAPPLSMFRSQDLLRPFLLACNHSDAPAKLIGMALGSVQHLINRDAVSPADAPNVMRVLAIQAASAQPDVQLRVLQTLVMVVTWHGCEMSEETXXXXXXXXXXXXXXXXXVAHCQLPQXXXXXXXXXXXXXXXXXXAQALGVCLALHEAKNTTVRRAAYMTVRQIVSLLFDRVDDQV 229
BLAST of mRNA_Ecto-sp8_S_contig10385.627.1 vs. uniprot
Match: A0A4D9CR02_9STRA (Protein MON2 homolog n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CR02_9STRA) HSP 1 Score: 207 bits (528), Expect = 2.430e-58 Identity = 104/189 (55.03%), Postives = 149/189 (78.84%), Query Frame = 3
Query: 51 MEFLRVVEEELRGLAAEARRRHPVVQEAAERAILKLRNMREEYAVALRQQHEGNAPPLSMFRSQDLLRPFLLACNHADASPHLMIMAMGSIQYLINRDAILPSDAPNILRVLAIQSQSKDA---DVQKRVLQTMVMVVTWKSCDMTEDTVAQALGVCLGLHDAKNAMVRTAADMTVRQIISLLFGRVAD 608
M+FLR VE++LR L+ EA+++HPV++EAAER I+KLR +RE+YA A+RQ G + P+S RSQ++LRPFLLACNH+D S +++ A+GSI +LIN+DAI PSDAPNILRVLAIQ+ S A +V +VLQT+++ +TW++CD+ ED +A AL +C+ L + +NA VR AA T+RQ++SL+F R+A+
Sbjct: 1 MDFLRSVEDDLRALSVEAKKKHPVIKEAAERGIVKLRTLREQYAAAVRQ--SGESMPVSRLRSQEVLRPFLLACNHSDCSKAIILHALGSITHLINKDAISPSDAPNILRVLAIQAVSPSAAAPEVHVKVLQTLLLTITWRACDLAEDMLASALIICIQLTEHRNATVRNAAQATLRQVVSLMFDRIAE 187
BLAST of mRNA_Ecto-sp8_S_contig10385.627.1 vs. uniprot
Match: A0A7S3XN40_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XN40_HETAK) HSP 1 Score: 138 bits (347), Expect = 2.090e-38 Identity = 74/130 (56.92%), Postives = 98/130 (75.38%), Query Frame = 3
Query: 51 MEFLRVVEEELRGLAAEARRRHPVVQEAAERAILKLRNMREEYAVALRQQHEGNAPPLSMFRSQDLLRPFLLACNHADASPHLMIMAMGSIQYLINRDAILPSDAPNILRVLAIQSQSKDADVQKRVLQT 440
MEFLR+VE+ELR L AE+++++P V+EA+ERA + LR +RE YA ALR APPLSMFRSQ +L PFLLACNHA A P L A+G+++ L+ RDA+ P+D N+LRVLAIQ +S D+ + +VLQT
Sbjct: 1 MEFLRLVEDELRHLCAESKKKYPEVKEASERATVALRGLRERYARALRASGGEAAPPLSMFRSQVVLAPFLLACNHAGAGPRLAGRALGAVRLLVGRDALDPADRGNVLRVLAIQVRSGDSTTELKVLQT 130
BLAST of mRNA_Ecto-sp8_S_contig10385.627.1 vs. uniprot
Match: D0NBH6_PHYIT (Uncharacterized protein n=12 Tax=Phytophthora TaxID=4783 RepID=D0NBH6_PHYIT) HSP 1 Score: 144 bits (362), Expect = 4.590e-36 Identity = 83/195 (42.56%), Postives = 129/195 (66.15%), Query Frame = 3
Query: 51 MEFLRVVEEELRGLAAEARRRHPVVQEAAERAILKLRNMREEYAVALRQQHEGNAPPLSMFRSQDLLRPFLLACNHADASPHLMIMAMGSIQYLINRDAILPSDAPNILRVLAIQSQSKD-ADVQKRVLQTMVMVVTW-------KSCDMTEDTVAQALGVCLGLH---DAKNAMVRTAADMTVRQIISLLFGRV 602
M+FLR + +L L AEA+R++PVV+EA +RA+ L ++++YA LR + P S+F+S+ +LRPFLLACNH +AS ++++A+ SIQ L++ DAI P+ +ILRVL IQ++ ADVQ ++LQT++ ++T K ED V QA+ +C+ LH + ++MV A MT+RQ++SL FG+V
Sbjct: 1 MDFLRQLAADLHALRAEAKRKYPVVKEAVDRALEALPALQQQYAALLRVEGRAPGPGHSLFQSESVLRPFLLACNHTNASHKILVLALSSIQRLVSWDAIEPASVGSILRVLQIQAEKNTHADVQVKLLQTLLQLMTLAYEEKAKKQLVGNEDMVMQAVWICIHLHASSSSASSMVGNTAAMTIRQLVSLAFGKV 195
BLAST of mRNA_Ecto-sp8_S_contig10385.627.1 vs. uniprot
Match: H3H299_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H299_PHYRM) HSP 1 Score: 135 bits (340), Expect = 4.100e-33 Identity = 83/210 (39.52%), Postives = 130/210 (61.90%), Query Frame = 3
Query: 51 MEFLRVVEEELRGLAAEARRRHPVVQEAAERAILKLRNMREEYAVALRQQHEGNAPPLSMFRSQDLLRPFLLACNHADASPHLMIMAMGSIQYLINRDAILPSDAPNILRVLAIQSQSKD-ADVQKRVLQTMVMVVTWK------------SCDMT----------EDTVAQALGVCLGLH---DAKNAMVRTAADMTVRQIISLLFGRV 602
M+FLR + +L L EA+R++PVV+EA +RA+ L ++++YA LR + P S+F+S+ +LRPFLLACNH +AS ++++A+ SIQ L++ DAI P+ +ILRVL IQ++ ADVQ ++LQT++ ++T + D T ED V QA+ +C+ LH + ++MV A MT+RQ++SL FG+V
Sbjct: 1 MDFLRQLAADLHALRTEAKRKYPVVKEAVDRALETLPALQQQYAALLRVEGRAPGPGHSLFQSESVLRPFLLACNHTNASHKILVLALASIQRLVSWDAIEPASVGSILRVLQIQAEKNTHADVQIKLLQTLLQLMTLAYEEKKGKEQVRTAPDRTQTTESELVGNEDMVMQAVWICIHLHASSSSASSMVGNTAAMTIRQLVSLAFGKV 210
BLAST of mRNA_Ecto-sp8_S_contig10385.627.1 vs. uniprot
Match: G5A5B2_PHYSP (Protein MON2 homolog n=5 Tax=Phytophthora TaxID=4783 RepID=G5A5B2_PHYSP) HSP 1 Score: 133 bits (335), Expect = 1.910e-32 Identity = 81/215 (37.67%), Postives = 128/215 (59.53%), Query Frame = 3
Query: 51 MEFLRVVEEELRGLAAEARRRHPVVQEAAERAILKLRNMREEYAVALRQQHEGNAPPLSMFRSQDLLRPFLLACNHADASPHLMIMAMGSIQYLINRDAILPSDAPNILRVLAIQSQSK-DADVQKRVLQTMVMVVTWKSCDM---------------------------TEDTVAQALGVCLGLH---DAKNAMVRTAADMTVRQIISLLFGRV 602
M+FLR + +L L EA+R++PVV+EA +RA+ L ++++YA LR + P ++F+S+ +LRPFLLACNH +AS ++++A+ SIQ L++ DAI P+ +ILRVL IQ++ ADVQ ++LQT++ ++T D ED V QA+ +C+ LH + ++MV A MT+RQ++SL FG+V
Sbjct: 1 MDFLRQLAADLHALRGEAKRKYPVVKEAVDRALETLPALQQQYAALLRVEGRAPGPGHALFQSESVLRPFLLACNHTNASHKILVLALSSIQRLVSWDAIEPASVGSILRVLQIQAEKNAHADVQVKLLQTLLQLMTLAYEDKKGPARPAHKPRTPAQDGQPGPDSELVGNEDMVMQAVWICMHLHASSSSASSMVGNTAAMTIRQLVSLAFGKV 215
BLAST of mRNA_Ecto-sp8_S_contig10385.627.1 vs. uniprot
Match: A0A0N7L513_PLAHL (Uncharacterized conserved protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L513_PLAHL) HSP 1 Score: 133 bits (335), Expect = 1.920e-32 Identity = 81/216 (37.50%), Postives = 130/216 (60.19%), Query Frame = 3
Query: 51 MEFLRVVEEELRGLAAEARRRHPVVQEAAERAILKLRNMREEYAVALRQQHEGNAPPLSMFRSQDLLRPFLLACNHADASPHLMIMAMGSIQYLINRDAILPSDAPNILRVLAIQSQSKD-ADVQKRVLQTMVMVVT---------------------WKSCDM-------TEDTVAQALGVCLGLH---DAKNAMVRTAADMTVRQIISLLFGRV 602
M+FLR + +L L EA+R++PVV+EA +RA+ L ++++YA +LR + P +F+S+ +LRPFLLACNH +AS ++++A+ SIQ L++ DAI P+ +ILRVL IQ++ ADVQ ++LQT++ ++T +SC ED V QA+ +C+ LH + +++V A MT+RQ++SL FG+V
Sbjct: 1 MDFLRQLAVDLHALRVEAKRKYPVVKEAVDRALETLPALQQQYAASLRVEGRAPGPGHCLFQSESVLRPFLLACNHTNASHKILVLALSSIQRLVSWDAIEPASVGSILRVLQIQAEKNTHADVQVKLLQTLLQLMTLAYEERQKESRKAIEPIQDSQMQSCPSDNNTLVGNEDMVMQAVWICIHLHATSSSASSLVGNTAAMTIRQVVSLAFGKV 216
BLAST of mRNA_Ecto-sp8_S_contig10385.627.1 vs. uniprot
Match: A0A3F2RRM7_9STRA (Protein MON2 homolog n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RRM7_9STRA) HSP 1 Score: 132 bits (333), Expect = 3.490e-32 Identity = 82/215 (38.14%), Postives = 130/215 (60.47%), Query Frame = 3
Query: 51 MEFLRVVEEELRGLAAEARRRHPVVQEAAERAILKLRNMREEYAVALRQQHEGNAPPLSMFRSQDLLRPFLLACNHADASPHLMIMAMGSIQYLINRDAILPSDAPNILRVLAIQSQSKD-ADVQKRVLQTMVMVVTW--------------KSCDMTEDT-------------VAQALGVCLGLHDAKNA---MVRTAADMTVRQIISLLFGRV 602
M+FLR + +L L AEA+R++PVV+EA +RA+ L ++++YA LR + P +F+S+ +LRPFLLACNH +AS ++++A+ SIQ L++ DAI P+ +ILRVL IQ++ ADVQ ++LQT++ ++T K + +DT V QA+ +C+ LH A ++ +V A MT+RQ++SL FG+V
Sbjct: 32 MDFLRQLAADLHSLRAEAKRKYPVVKEAVDRALEALPALQQQYAALLRVEGRAPGPGHPLFQSESVLRPFLLACNHTNASHKILVLALASIQRLVSWDAIEPTSVGSILRVLQIQAEKNTHADVQVKLLQTLLQLMTLAYEEKKDTGQQDRTKKQSVVQDTGQQDSELVGNEDMVMQAVWICMHLHAASSSASSLVGNTAAMTIRQLVSLAFGKV 246 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig10385.627.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig10385.627.1 >prot_Ecto-sp8_S_contig10385.627.1 ID=prot_Ecto-sp8_S_contig10385.627.1|Name=mRNA_Ecto-sp8_S_contig10385.627.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=190bp MEFLRVVEEELRGLAAEARRRHPVVQEAAERAILKLRNMREEYAVALRQQback to top mRNA from alignment at Ecto-sp8_S_contig10385:2366..5619- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig10385.627.1 ID=mRNA_Ecto-sp8_S_contig10385.627.1|Name=mRNA_Ecto-sp8_S_contig10385.627.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=3254bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10385:2366..5619- (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig10385:2366..5619- >mRNA_Ecto-sp8_S_contig10385.627.1 ID=mRNA_Ecto-sp8_S_contig10385.627.1|Name=mRNA_Ecto-sp8_S_contig10385.627.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=570bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10385:2366..5619- (Ectocarpus species8 EcLAC_412)back to top |