mRNA_Ecto-sp8_S_contig10375.613.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig10375.613.1 vs. uniprot
Match: A0A6H5KEW6_9PHAE (Isochorismatase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KEW6_9PHAE) HSP 1 Score: 292 bits (747), Expect = 2.250e-97 Identity = 147/152 (96.71%), Postives = 148/152 (97.37%), Query Frame = 1
Query: 10 RHKLMQSPEGKRIGDLGPMGRILVRGERGHDIIPELYPLPMEPCIDKPGKGAFFSTDLETILRSRGIATLIVCGVTTEVCVHTTVREANDRGFACVVVDEACSSFFPEFHRVGLSMVKAQGGIFGRVASVASVVRAVRELAVAGAGAADSSS 465
RHKLMQSPEGKRIGDLGPMGRILVRGERGHDIIPELYPLPMEPC+DKPGKGAFFSTDLETILRSRGI TLIVCGVTTEVCVHTTVREANDRGFACVVVDEACSSFFPEFHRVGLSMV AQGGIFGRVASVASVVRAVRELA AGAGAAD SS
Sbjct: 89 RHKLMQSPEGKRIGDLGPMGRILVRGERGHDIIPELYPLPMEPCVDKPGKGAFFSTDLETILRSRGIETLIVCGVTTEVCVHTTVREANDRGFACVVVDEACSSFFPEFHRVGLSMVMAQGGIFGRVASVASVVRAVRELAGAGAGAADPSS 240
BLAST of mRNA_Ecto-sp8_S_contig10375.613.1 vs. uniprot
Match: UPI0015D51A60 (cysteine hydrolase n=1 Tax=Azospirillum oleiclasticum TaxID=2735135 RepID=UPI0015D51A60) HSP 1 Score: 196 bits (499), Expect = 7.180e-60 Identity = 95/143 (66.43%), Postives = 111/143 (77.62%), Query Frame = 1
Query: 16 KLMQSPEGKRIGDLGPMGRILVRGERGHDIIPELYPLPMEPCIDKPGKGAFFSTDLETILRSRGIATLIVCGVTTEVCVHTTVREANDRGFACVVVDEACSSFFPEFHRVGLSMVKAQGGIFGRVASVASVVRAVRELAVAGA 444
K+ + RIGD GPMGRIL+RGE GHDIIPEL P EP +DKPGKGAFF+TDL+ ILR+RGIATL+VCGVTTEVCVHTT+REANDRG+ CV V +AC S+FPEFHRVGL+M+ AQGGIFG V A+ A+ V A
Sbjct: 87 KVSRGKPSARIGDPGPMGRILIRGEPGHDIIPELAPAAGEPVVDKPGKGAFFATDLDLILRTRGIATLLVCGVTTEVCVHTTIREANDRGYRCVAVGDACGSYFPEFHRVGLAMISAQGGIFGWVTDSAAAAGALASAGVRAA 229
BLAST of mRNA_Ecto-sp8_S_contig10375.613.1 vs. uniprot
Match: UPI001BCC76C6 (cysteine hydrolase n=1 Tax=Roseococcus sp. SDR TaxID=2835532 RepID=UPI001BCC76C6) HSP 1 Score: 195 bits (495), Expect = 2.400e-59 Identity = 96/137 (70.07%), Postives = 110/137 (80.29%), Query Frame = 1
Query: 16 KLMQSPEGKRIGDLGPMGRILVRGERGHDIIPELYPLPMEPCIDKPGKGAFFSTDLETILRSRGIATLIVCGVTTEVCVHTTVREANDRGFACVVVDEACSSFFPEFHRVGLSMVKAQGGIFGRVASVASVVRAVRE 426
KL +SP G RIGD GPMGRILVRGE GHDIIPEL PLP E +DKPGKGAF++TDLE ILR+RGI L+V GVTTEVCV TTVREANDRGF C V+ +AC+S+FP FH L+M+ AQGGIFG VAS A+ A+RE
Sbjct: 86 KLTRSPPGMRIGDPGPMGRILVRGEAGHDIIPELAPLPGEVVLDKPGKGAFWATDLENILRNRGIEALLVAGVTTEVCVSTTVREANDRGFRCAVISDACASYFPAFHTAALAMIHAQGGIFGWVASSAAATTALRE 222
BLAST of mRNA_Ecto-sp8_S_contig10375.613.1 vs. uniprot
Match: A0A1Q3KCY5_9PROT (Cysteine hydrolase n=1 Tax=Alphaproteobacteria bacterium 65-37 TaxID=1895711 RepID=A0A1Q3KCY5_9PROT) HSP 1 Score: 194 bits (493), Expect = 4.260e-59 Identity = 92/125 (73.60%), Postives = 108/125 (86.40%), Query Frame = 1
Query: 46 IGDLGPMGRILVRGERGHDIIPELYPLPMEPCIDKPGKGAFFSTDLETILRSRGIATLIVCGVTTEVCVHTTVREANDRGFACVVVDEACSSFFPEFHRVGLSMVKAQGGIFGRVASVASVVRAV 420
IGD GPMGR+L+RGE+GHDIIPELYP P EP IDKPGKGAFF+TDLE +LR+RGI TLIVCGVTTEVCV+TTVREANDRGF C+VV +A S+FPEF+R L M+KAQGGIFG VA+ +V+ A+
Sbjct: 96 IGDEGPMGRVLIRGEKGHDIIPELYPAPNEPVIDKPGKGAFFATDLELMLRNRGIRTLIVCGVTTEVCVNTTVREANDRGFECLVVSDAVGSYFPEFNRSALEMIKAQGGIFGWVAASTAVIDAI 220
BLAST of mRNA_Ecto-sp8_S_contig10375.613.1 vs. uniprot
Match: A0A370L3T7_9HYPH (Cysteine hydrolase n=2 Tax=Bosea caraganae TaxID=2763117 RepID=A0A370L3T7_9HYPH) HSP 1 Score: 193 bits (490), Expect = 5.700e-59 Identity = 93/135 (68.89%), Postives = 109/135 (80.74%), Query Frame = 1
Query: 16 KLMQSPEGKRIGDLGPMGRILVRGERGHDIIPELYPLPMEPCIDKPGKGAFFSTDLETILRSRGIATLIVCGVTTEVCVHTTVREANDRGFACVVVDEACSSFFPEFHRVGLSMVKAQGGIFGRVASVASVVRAV 420
K+ + KRIG GPMGRIL+RGE GHDIIPEL PLP EP IDKPGKGAF+ TDLE +LR+ GI TL+VCGVTTEVCVHTTVREANDRG+ C+V+ +AC S+FPEFH VGL M+ AQGGIFG V+S V+ A+
Sbjct: 61 KVSRGAPDKRIGAEGPMGRILIRGEAGHDIIPELAPLPDEPVIDKPGKGAFYQTDLELMLRNSGIETLLVCGVTTEVCVHTTVREANDRGYRCLVLGDACGSYFPEFHEVGLRMIAAQGGIFGWVSSTDEVLAAL 195
BLAST of mRNA_Ecto-sp8_S_contig10375.613.1 vs. uniprot
Match: UPI0010C143FB (cysteine hydrolase n=1 Tax=Roseomonas sp. AR75 TaxID=2562311 RepID=UPI0010C143FB) HSP 1 Score: 194 bits (492), Expect = 7.260e-59 Identity = 94/139 (67.63%), Postives = 112/139 (80.58%), Query Frame = 1
Query: 10 RHKLMQSPEGKRIGDLGPMGRILVRGERGHDIIPELYPLPMEPCIDKPGKGAFFSTDLETILRSRGIATLIVCGVTTEVCVHTTVREANDRGFACVVVDEACSSFFPEFHRVGLSMVKAQGGIFGRVASVASVVRAVRE 426
R K+ +SP G RIGD GPMGRIL+RGE GH+I+PEL P P EP IDKPGKGAF+ TDLE +LR+RGI TL+V GVTTEVCVHTTVREANDRG C+V+ + C S+FPEFH L+MV AQGGIFG V+ VA++ RA+ E
Sbjct: 83 RAKVHRSPPGLRIGDPGPMGRILIRGEPGHEIVPELAPEPGEPVIDKPGKGAFYQTDLELMLRNRGIETLLVAGVTTEVCVHTTVREANDRGLRCIVLADCCGSYFPEFHEAALAMVAAQGGIFGWVSDVAALRRAMGE 221
BLAST of mRNA_Ecto-sp8_S_contig10375.613.1 vs. uniprot
Match: A0A1H8ZJZ1_9GAMM (Nicotinamidase-related amidase n=1 Tax=Solimonas aquatica TaxID=489703 RepID=A0A1H8ZJZ1_9GAMM) HSP 1 Score: 193 bits (491), Expect = 8.540e-59 Identity = 94/135 (69.63%), Postives = 109/135 (80.74%), Query Frame = 1
Query: 16 KLMQSPEGKRIGDLGPMGRILVRGERGHDIIPELYPLPMEPCIDKPGKGAFFSTDLETILRSRGIATLIVCGVTTEVCVHTTVREANDRGFACVVVDEACSSFFPEFHRVGLSMVKAQGGIFGRVASVASVVRAV 420
KL + +RIGD GPMGRIL+RGE GHDIIPELYPLP EP IDKPGKG+F TDLE IL++RGI TLIVCGVTTEVCVHTTVREANDRGF C+V + +S+FPEFH V L M++AQGGIFG V+ A V+ A+
Sbjct: 86 KLSRGGGPQRIGDAGPMGRILIRGEPGHDIIPELYPLPGEPVIDKPGKGSFCQTDLELILKNRGIRTLIVCGVTTEVCVHTTVREANDRGFECLVPSDCAASYFPEFHEVALRMIQAQGGIFGWVSDSAKVIAAL 220
BLAST of mRNA_Ecto-sp8_S_contig10375.613.1 vs. uniprot
Match: A0A537R4U0_9PROT (Cysteine hydrolase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537R4U0_9PROT) HSP 1 Score: 193 bits (490), Expect = 1.290e-58 Identity = 91/134 (67.91%), Postives = 107/134 (79.85%), Query Frame = 1
Query: 10 RHKLMQSPEGKRIGDLGPMGRILVRGERGHDIIPELYPLPMEPCIDKPGKGAFFSTDLETILRSRGIATLIVCGVTTEVCVHTTVREANDRGFACVVVDEACSSFFPEFHRVGLSMVKAQGGIFGRVASVASVV 411
R K+ + RIGD GPMGRIL+RGE GHDIIPELYPL EP +DKPGKG F+ TDL+ +LR+RGI TL+VCGVTTEVCVHTTVREANDRG+ C+VV + C S+FPEFH VGL M+ AQGGIFG VA +V+
Sbjct: 85 RAKVERGAPSLRIGDRGPMGRILIRGEVGHDIIPELYPLAGEPVLDKPGKGGFYQTDLDLMLRNRGIETLLVCGVTTEVCVHTTVREANDRGYRCIVVGDCCGSYFPEFHEVGLRMIAAQGGIFGWVADSGAVI 218
BLAST of mRNA_Ecto-sp8_S_contig10375.613.1 vs. uniprot
Match: A0A4Q3INH2_9HYPH (Cysteine hydrolase n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A4Q3INH2_9HYPH) HSP 1 Score: 193 bits (491), Expect = 2.280e-58 Identity = 90/135 (66.67%), Postives = 112/135 (82.96%), Query Frame = 1
Query: 16 KLMQSPEGKRIGDLGPMGRILVRGERGHDIIPELYPLPMEPCIDKPGKGAFFSTDLETILRSRGIATLIVCGVTTEVCVHTTVREANDRGFACVVVDEACSSFFPEFHRVGLSMVKAQGGIFGRVASVASVVRAV 420
K+ + P KRIG GPMGRIL+RGE GHDI+P L PLP EP +DKPGKGAF+ TDL+ +LR+RGI TL+VCGVTTEVCVHTTVREANDRG+ C+V+ +AC+S+FPEFH VGL M+ AQGGIFG V++ +V+ A+
Sbjct: 112 KVQRGPVEKRIGADGPMGRILIRGEAGHDIVPALAPLPGEPVLDKPGKGAFYQTDLDLMLRNRGIETLLVCGVTTEVCVHTTVREANDRGYRCLVLGDACASYFPEFHEVGLRMIAAQGGIFGWVSTTGAVLAAL 246
BLAST of mRNA_Ecto-sp8_S_contig10375.613.1 vs. uniprot
Match: A0A2M9PDB7_9RHOB (Isochorismatase (Fragment) n=1 Tax=Amaricoccus sp. HAR-UPW-R2A-40 TaxID=1985299 RepID=A0A2M9PDB7_9RHOB) HSP 1 Score: 190 bits (483), Expect = 2.430e-58 Identity = 86/135 (63.70%), Postives = 108/135 (80.00%), Query Frame = 1
Query: 16 KLMQSPEGKRIGDLGPMGRILVRGERGHDIIPELYPLPMEPCIDKPGKGAFFSTDLETILRSRGIATLIVCGVTTEVCVHTTVREANDRGFACVVVDEACSSFFPEFHRVGLSMVKAQGGIFGRVASVASVVRAV 420
K+ + KRIGD GPMGRIL+RGE GHDI+ +LYP P EP IDKPGKGAF TDL+ +L++ G+ TL+VCGVTTEVCVHTT+RE NDRG+ CV + +AC+S+FPEFHR+GL M+KAQGGIFG V+ A+ A+
Sbjct: 25 KIARGAPSKRIGDPGPMGRILIRGEAGHDIVTDLYPAPGEPVIDKPGKGAFHQTDLDQVLKNGGVDTLMVCGVTTEVCVHTTIREGNDRGYRCVAIGDACASYFPEFHRIGLEMIKAQGGIFGWVSDSAAFASAL 159 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig10375.613.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig10375.613.1 >prot_Ecto-sp8_S_contig10375.613.1 ID=prot_Ecto-sp8_S_contig10375.613.1|Name=mRNA_Ecto-sp8_S_contig10375.613.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=149bp MQSPEGKRIGDLGPMGRILVRGERGHDIIPELYPLPMEPCIDKPGKGAFFback to top mRNA from alignment at Ecto-sp8_S_contig10375:3104..4935- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig10375.613.1 ID=mRNA_Ecto-sp8_S_contig10375.613.1|Name=mRNA_Ecto-sp8_S_contig10375.613.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=1832bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10375:3104..4935- (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig10375:3104..4935- >mRNA_Ecto-sp8_S_contig10375.613.1 ID=mRNA_Ecto-sp8_S_contig10375.613.1|Name=mRNA_Ecto-sp8_S_contig10375.613.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=447bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10375:3104..4935- (Ectocarpus species8 EcLAC_412)back to top |