mRNA_Ecto-sp8_S_contig10373.611.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig10373.611.1 vs. uniprot
Match: D7G3P6_ECTSI (Origin recognition complex subunit 2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3P6_ECTSI) HSP 1 Score: 342 bits (878), Expect = 5.270e-113 Identity = 170/172 (98.84%), Postives = 171/172 (99.42%), Query Frame = 3
Query: 3 LRNEDSQEALAELSASRYVHLVASMDHVNAPLMWDVRLSEKFNWLFHKTHTYKPYVEEVRSRRNWCTIEGEVQALERLSQVMKALTPRHVDVVVCVAKKLKDNPGLQGKCNYRDVLSKLKSDLSADTSQVLDGLLVELKDHDVIVEEKTGNSRFLSIAGGPEVVDFLAAYKR 518
LRNEDSQEALAELSASRYVHLVASMDHVNAPLMWDV LSEKFNWLFHKTHTYKPYVEEVRSRRNWCTIEGEVQALERLSQVMKALTPRHVDVVVCVAKKLKDNPGLQGKCNYRDVLSKLKSDLSADTSQVLDGLLVELKDHDVIVEEKTGNSRFLSI+GGPEVVDFLAAYKR
Sbjct: 384 LRNEDSQEALAELSASRYVHLVASMDHVNAPLMWDVGLSEKFNWLFHKTHTYKPYVEEVRSRRNWCTIEGEVQALERLSQVMKALTPRHVDVVVCVAKKLKDNPGLQGKCNYRDVLSKLKSDLSADTSQVLDGLLVELKDHDVIVEEKTGNSRFLSISGGPEVVDFLAAYKR 555
BLAST of mRNA_Ecto-sp8_S_contig10373.611.1 vs. uniprot
Match: A0A6H5KM74_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KM74_9PHAE) HSP 1 Score: 222 bits (566), Expect = 1.590e-69 Identity = 111/119 (93.28%), Postives = 114/119 (95.80%), Query Frame = 3
Query: 162 PYVEEVRSRRNWCTIEGEVQALERLSQVMKALTPRHVDVVVCVAKKLKDNPGLQGKCNYRDVLSKLKSDLSADTSQVLDGLLVELKDHDVIVEEKTGNSRFLSIAGGPEVVDFLAAYKR 518
P +E RRNWCTIEGEVQALERLSQVMKALTPRHVDVVVCVAKKLKDNPGLQGKCNYRDVL+KLKSDLSADTSQVLDGLLVELKDHDVIVEEKTGNSRFLSI+GGPEVVDFLAAYKR
Sbjct: 156 PLYKEREVRRNWCTIEGEVQALERLSQVMKALTPRHVDVVVCVAKKLKDNPGLQGKCNYRDVLAKLKSDLSADTSQVLDGLLVELKDHDVIVEEKTGNSRFLSISGGPEVVDFLAAYKR 274
BLAST of mRNA_Ecto-sp8_S_contig10373.611.1 vs. uniprot
Match: A0A6H5LEG7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LEG7_9PHAE) HSP 1 Score: 126 bits (317), Expect = 5.710e-30 Identity = 59/62 (95.16%), Postives = 60/62 (96.77%), Query Frame = 3
Query: 3 LRNEDSQEALAELSASRYVHLVASMDHVNAPLMWDVRLSEKFNWLFHKTHTYKPYVEEVRSR 188
LRNEDSQEALAELSASRYVHL+ASMDHVNAPLMWDVRLSEKFNWLFHKTHTYKPYVEEV R
Sbjct: 1025 LRNEDSQEALAELSASRYVHLIASMDHVNAPLMWDVRLSEKFNWLFHKTHTYKPYVEEVSER 1086
BLAST of mRNA_Ecto-sp8_S_contig10373.611.1 vs. uniprot
Match: UPI0003F06B3F (origin recognition complex subunit 2-like n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0003F06B3F) HSP 1 Score: 99.4 bits (246), Expect = 1.410e-20 Identity = 54/151 (35.76%), Postives = 86/151 (56.95%), Query Frame = 3
Query: 3 LRNEDSQEALAELSASRYVHLVASMDHVNAPLMWDVRLSEKFNWLFHKTHTYKPYVEEVRSRRNWCTIEGEVQALERLSQVMKALTPRHVDVVVCVAK---KLKDNPGLQGKCNYRDVLSKLKSDLSADTSQVLDGLLVELKDHDVIVEEK 446
LR E +Q L+ L S VHLVA++DH+NAPL+WD S +FNWL++ TY+PY+EE + + V AL L+ VM++LTP + + +A+ + KDN G +++D+ K + ++ L L E +DH +I+ +K
Sbjct: 391 LRGEKTQNILSLLVQSSKVHLVATIDHINAPLVWDQTKSSRFNWLWYDVTTYEPYIEETSYENSLLVQQSGVLALSSLTHVMRSLTPNARGIFLLLARYQMEQKDNSSYIGM-SFQDLYQKCRESFLVNSDLTLRAQLTEFRDHKLIIFKK 540
BLAST of mRNA_Ecto-sp8_S_contig10373.611.1 vs. uniprot
Match: A0A8J1U986_OWEFU (Origin recognition complex subunit 2 n=1 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1U986_OWEFU) HSP 1 Score: 99.0 bits (245), Expect = 1.850e-20 Identity = 54/151 (35.76%), Postives = 86/151 (56.95%), Query Frame = 3
Query: 3 LRNEDSQEALAELSASRYVHLVASMDHVNAPLMWDVRLSEKFNWLFHKTHTYKPYVEEVRSRRNWCTIEGEVQALERLSQVMKALTPRHVDVVVCVAKKL---KDNPGLQGKCNYRDVLSKLKSDLSADTSQVLDGLLVELKDHDVIVEEK 446
LR E Q L+ L+ + H++AS+DH+NAPL+WD R S FNWL++ T++PY+EE + + V AL L+ VM++LTP + + + + KDNP G +++D+ K + ++ Q L+ LVE KDH +I +K
Sbjct: 371 LRAEKVQAVLSLLAQIQGFHIIASIDHINAPLIWDQRKSSGFNWLWYDVTTFEPYIEETSYENSLLVQQSGVLALSSLTHVMRSLTPNAKGIFLLLVRYQLDNKDNPQYSGM-SFQDLYQKCREAFLVNSDQTLNTQLVEFKDHKLIRSKK 520
BLAST of mRNA_Ecto-sp8_S_contig10373.611.1 vs. uniprot
Match: H3B312_LATCH (Origin recognition complex subunit 2 n=2 Tax=Latimeria chalumnae TaxID=7897 RepID=H3B312_LATCH) HSP 1 Score: 97.4 bits (241), Expect = 6.650e-20 Identity = 57/162 (35.19%), Postives = 91/162 (56.17%), Query Frame = 3
Query: 3 LRNEDSQEALAELSASRYVHLVASMDHVNAPLMWDVRLSEKFNWLFHKTHTYKPYVEEVRSRRNWCTIEGEVQALERLSQVMKALTPRHVDVVVCVAK---KLKDNPGLQGKCNYRDVLSKLKSDLSADTSQVLDGLLVELKDHDVIVEEKTGN-SRFLSIA 476
LR E +Q+ L +L+A +HL+AS+DH+NAPLMWD FNWL+++T TYK YVEE ++ + AL L+ V+++LTP + +A + KDNP G +++D + + ++ L L E KDH +I +K + +++L IA
Sbjct: 391 LRGERTQQLLGQLAAVPNIHLLASLDHINAPLMWDQSKLSLFNWLWYETTTYKAYVEETSYENSFLVQQSGALALSSLTHVLRSLTPNARGIFRLLAHFHLENKDNPSYIG-LSFQDFYQRCREAFLVNSDLTLRAQLTEFKDHKLIRTKKGADGAKYLVIA 551
BLAST of mRNA_Ecto-sp8_S_contig10373.611.1 vs. uniprot
Match: W5MUG4_LEPOC (Origin recognition complex subunit 2 n=2 Tax=Lepisosteus oculatus TaxID=7918 RepID=W5MUG4_LEPOC) HSP 1 Score: 97.4 bits (241), Expect = 6.730e-20 Identity = 55/151 (36.42%), Postives = 85/151 (56.29%), Query Frame = 3
Query: 3 LRNEDSQEALAELSASRYVHLVASMDHVNAPLMWDVRLSEKFNWLFHKTHTYKPYVEEVRSRRNWCTIEGEVQALERLSQVMKALTPRHVDVVVCVAK---KLKDNPGLQGKCNYRDVLSKLKSDLSADTSQVLDGLLVELKDHDVIVEEK 446
LR E +Q+ LA+L+A +HL+AS+DH+NAPL+WD FNWL+++T TY PYVEE + + AL L+ VM++LTP + +A+ + KDNP G +++D + + ++ L L E KDH +I +K
Sbjct: 400 LRGEKTQQTLAQLAAIPNLHLIASIDHINAPLIWDQSKMSLFNWLWYETTTYLPYVEETSYENSLLVQQSGAIALSSLTHVMRSLTPNARGIFRLLAEFQLENKDNPSYTG-LSFQDFYQRCREAFLVNSDITLRTQLTEFKDHKLIRTKK 549
BLAST of mRNA_Ecto-sp8_S_contig10373.611.1 vs. uniprot
Match: A0A8J7THG2_ATRSP (Origin recognition complex subunit 2 (Fragment) n=1 Tax=Atractosteus spatula TaxID=7917 RepID=A0A8J7THG2_ATRSP) HSP 1 Score: 97.4 bits (241), Expect = 8.600e-20 Identity = 55/151 (36.42%), Postives = 85/151 (56.29%), Query Frame = 3
Query: 3 LRNEDSQEALAELSASRYVHLVASMDHVNAPLMWDVRLSEKFNWLFHKTHTYKPYVEEVRSRRNWCTIEGEVQALERLSQVMKALTPRHVDVVVCVAK---KLKDNPGLQGKCNYRDVLSKLKSDLSADTSQVLDGLLVELKDHDVIVEEK 446
LR E +Q+ LA+L+A +HL+AS+DH+NAPL+WD FNWL+++T TY PYVEE + + AL L+ VM++LTP + +A+ + KDNP G +++D + + ++ L L E KDH +I +K
Sbjct: 395 LRGEKTQQTLAQLAAIPNLHLIASIDHINAPLIWDQSKMSLFNWLWYETPTYLPYVEETSYENSLLVQQSGAIALSSLTHVMRSLTPNARGIFRLLAEFQLENKDNPSYTG-LSFQDFYQRCREAFLVNSDITLRTQLTEFKDHKLIRTKK 544
BLAST of mRNA_Ecto-sp8_S_contig10373.611.1 vs. uniprot
Match: A0A8B7JAN1_9AVES (Origin recognition complex subunit 2 n=8 Tax=Palaeognathae TaxID=8783 RepID=A0A8B7JAN1_9AVES) HSP 1 Score: 97.1 bits (240), Expect = 9.030e-20 Identity = 56/161 (34.78%), Postives = 90/161 (55.90%), Query Frame = 3
Query: 3 LRNEDSQEALAELSASRYVHLVASMDHVNAPLMWDVRLSEKFNWLFHKTHTYKPYVEEVRSRRNWCTIEGEVQALERLSQVMKALTPRHVDVVVCVAK---KLKDNPGLQGKCNYRDVLSKLKSDLSADTSQVLDGLLVELKDHDVIVEEKT-GNSRFLSI 473
LR E SQ+ LA+LS+ ++L+AS+DH+NAPLMWD FNWL+++T T+ PYVEE + + AL L+ V+++LTP + +A+ + KDNP G +++D + + ++ L L E +DH +I ++ GN + SI
Sbjct: 368 LRGERSQQILAQLSSLPSIYLIASIDHINAPLMWDQAKQSLFNWLWYETTTFSPYVEETSYENSLLVQQSGSLALSSLTHVLRSLTPNARGIFRLLAQYQLENKDNPSYPG-LSFQDFYQQCREAFLVNSDLTLRAQLTEFRDHKLIRTKRVCGNKPYSSI 527
BLAST of mRNA_Ecto-sp8_S_contig10373.611.1 vs. uniprot
Match: A0A8B9NV26_APTOW (Origin recognition complex subunit 2 n=1 Tax=Apteryx owenii TaxID=8824 RepID=A0A8B9NV26_APTOW) HSP 1 Score: 94.7 bits (234), Expect = 2.890e-19 Identity = 52/147 (35.37%), Postives = 83/147 (56.46%), Query Frame = 3
Query: 3 LRNEDSQEALAELSASRYVHLVASMDHVNAPLMWDVRLSEKFNWLFHKTHTYKPYVEEVRSRRNWCTIEGEVQALERLSQVMKALTPRHVDVVVCVAK---KLKDNPGLQGKCNYRDVLSKLKSDLSADTSQVLDGLLVELKDHDVI 434
LR E SQ+ LA+LS+ ++L+AS+DH+NAPLMWD FNWL+++T T+ PYVEE + + AL L+ V+++LTP + +A+ + KDNP G +++D + + ++ L L E +DH +I
Sbjct: 222 LRGERSQQILAQLSSLPSIYLIASIDHINAPLMWDQAKQSLFNWLWYETTTFSPYVEETSYENSLLVQQSGSLALSSLTHVLRSLTPNARGIFRLLAQYQLENKDNPSYPG-LSFQDFYQQCREAFLVNSDLTLRAQLTEFRDHKLI 367 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig10373.611.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig10373.611.1 >prot_Ecto-sp8_S_contig10373.611.1 ID=prot_Ecto-sp8_S_contig10373.611.1|Name=mRNA_Ecto-sp8_S_contig10373.611.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=149bp MDHVNAPLMWDVRLSEKFNWLFHKTHTYKPYVEEVRSRRNWCTIEGEVQAback to top mRNA from alignment at Ecto-sp8_S_contig10373:687..3129+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig10373.611.1 ID=mRNA_Ecto-sp8_S_contig10373.611.1|Name=mRNA_Ecto-sp8_S_contig10373.611.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=2443bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10373:687..3129+ (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig10373:687..3129+ >mRNA_Ecto-sp8_S_contig10373.611.1 ID=mRNA_Ecto-sp8_S_contig10373.611.1|Name=mRNA_Ecto-sp8_S_contig10373.611.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=447bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10373:687..3129+ (Ectocarpus species8 EcLAC_412)back to top |