mRNA_Ecto-sp8_S_contig10351.570.1 (mRNA) Ectocarpus species8 EcLAC_412

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp8_S_contig10351.570.1
Unique NamemRNA_Ecto-sp8_S_contig10351.570.1
TypemRNA
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Homology
BLAST of mRNA_Ecto-sp8_S_contig10351.570.1 vs. uniprot
Match: D7G099_ECTSI (Phosphodiesterase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G099_ECTSI)

HSP 1 Score: 736 bits (1900), Expect = 8.250e-250
Identity = 432/457 (94.53%), Postives = 436/457 (95.40%), Query Frame = 1
Query:    1 MGADVMPLTVEQIIELLESTAADSPLISPAALLCRVEGLLLRGTGATSADALLVDRWFNKLLHFSPATASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHEVAFNTRAVCDIGEGIAGMVAMAGRKLRLKDCSTQQHRRRGKALYGTEYTSGSVVCWPVSALPTEVGVTRAEAETSAFEQLEDVDGDDETEEARPSPGPAERVLAVLQVHCADGVLSAAAVEALHDLGRLLVPLLTEALARDEEYVRRRSTEALLSLSNISPRDVGLIAMVEEVVRVAQVMTEAERVCLFFVDDAADELWVAKSVDFDDAKIKIGEGLCGHAAATGGTVNVIDSYEDPRFDGRWDKQTGFVTKGVLCVPIPPPDQVVLGASPAAGGGSRGGMCGGGRDGPEGQESSGSLQDGSAELPRRDDGGTDPRVSMGVDGFQPLRRGGSQQHPAAWEGGGA 1371
            MGADVMPLTVEQIIELLESTAADSPLISPAALLCRVEGLLLRGTGATSADALLVDRWFNKLLHFSPATASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHEVAFNTRAVCDIGEGIAGM AM GRKL+LKDCST+Q RRRG  LYGTEYTSGSVV WPVSALPTEVGV +AEAETSAFEQLEDVDGDDETEEARPSPGPAERVLAVLQVHC DGVLSAAAVEALHDLGRLLVPLLTEALARDEEYVRRRSTEALLSLSNISPRDVGLIAMVEEVVRVAQ+MTEAERVCLFFVDDAADELWVAKSVDFDDAKIKIGEGLCGHAAATGGTVNVIDSYEDPRFDGRWDKQTGFVTKGVLCVPIPPPDQVVL ASP     SRGGM  GG DGPEGQESSGSLQDGS ELPRRDDGGTDPRVSM VDGFQPLRRGGSQQ PAAWE GGA
Sbjct:    1 MGADVMPLTVEQIIELLESTAADSPLISPAALLCRVEGLLLRGTGATSADALLVDRWFNKLLHFSPATASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHEVAFNTRAVCDIGEGIAGMAAMTGRKLQLKDCSTRQQRRRGNTLYGTEYTSGSVVSWPVSALPTEVGVRQAEAETSAFEQLEDVDGDDETEEARPSPGPAERVLAVLQVHCGDGVLSAAAVEALHDLGRLLVPLLTEALARDEEYVRRRSTEALLSLSNISPRDVGLIAMVEEVVRVAQIMTEAERVCLFFVDDAADELWVAKSVDFDDAKIKIGEGLCGHAAATGGTVNVIDSYEDPRFDGRWDKQTGFVTKGVLCVPIPPPDQVVLSASPXXXXXSRGGMWAGGGDGPEGQESSGSLQDGSGELPRRDDGGTDPRVSMDVDGFQPLRRGGSQQQPAAWEAGGA 457          
BLAST of mRNA_Ecto-sp8_S_contig10351.570.1 vs. uniprot
Match: D7G095_ECTSI (Phosphodiesterase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G095_ECTSI)

HSP 1 Score: 573 bits (1478), Expect = 5.830e-191
Identity = 349/376 (92.82%), Postives = 355/376 (94.41%), Query Frame = 1
Query:    7 ADVMPLTVEQIIELLESTAADSPLISPAALLCRVEGLLLRGTGATSADALLVDRWFNKLLHFSPATASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---HEVAFNTRAVCDIGEGIAGMVAMAGRKLRLKDCSTQQHRRRGKALYGTEYTSGSVVCWPVSALPTEVGVTRAEAETSAFEQLEDVDGDDETEEARPSPGPAERVLAVLQVHCADGVLSAAAVEALHDLGRLLVPLLTEALARDEEYVRRRSTEALLSLSNISPRDVGLIAMVEEVVRVAQVMTEAERVCLFFVDDAADELWVAKSVDFDDAKIKIGEGLCGHAAATGGTVNVIDSYEDPRFDGRWDKQTGFVTKGVLCVPIPPP 1125
            ++  PL  EQIIELLESTAADSPLISPAALLCRVEGLLLRGTGAT ADALLVDRWFNKLLHFSPATASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   HEVAFNTRAVCDIGEGIAGM AM GRKLRLKDCST+Q RRRGKALYGTEYTSGSVVCWPVSALPTEVGVTRAEAETSAFEQLEDVDGDDETEEARPSPGPAERVLAVLQVHCADGVLSAAAVEALH LGRLLVPLLTEALARDEEY+RRRSTEALLSLS ISPRDVGLIAMVEEVV  AQVMTEAERVCLFFVDDA  +LWVA SV F+D KIKIGEGLCGHAAATGGTVNVIDSYEDPRF GRWDKQTGFVTKGVLCVPIPPP
Sbjct:   10 SEPQPLRFEQIIELLESTAADSPLISPAALLCRVEGLLLRGTGATRADALLVDRWFNKLLHFSPATASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHEVAFNTRAVCDIGEGIAGMAAMTGRKLRLKDCSTRQQRRRGKALYGTEYTSGSVVCWPVSALPTEVGVTRAEAETSAFEQLEDVDGDDETEEARPSPGPAERVLAVLQVHCADGVLSAAAVEALHGLGRLLVPLLTEALARDEEYMRRRSTEALLSLSIISPRDVGLIAMVEEVVDAAQVMTEAERVCLFFVDDAEHKLWVATSVGFEDPKIKIGEGLCGHAAATGGTVNVIDSYEDPRFVGRWDKQTGFVTKGVLCVPIPPP 385          
BLAST of mRNA_Ecto-sp8_S_contig10351.570.1 vs. uniprot
Match: A0A6H5KY22_9PHAE (Phosphodiesterase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY22_9PHAE)

HSP 1 Score: 520 bits (1338), Expect = 2.420e-167
Identity = 297/361 (82.27%), Postives = 308/361 (85.32%), Query Frame = 1
Query:   22 LTVEQIIELLESTAADSPLISPAALLCRVEGLLLRGTGATSADALLVDRWFNKLLHFSPATASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--HEVAFNTRAVCDIGEGIAGMVAMAGRKLRLKDCSTQQHRRRGKALYGTEYTSGSVVCWPVSALPTEVGVTRAEAETSAFEQLEDVDGDDETEEARPSPGPAERVLAVLQVHCADGVLSAAAVEALHDLGRLLVPLLTEALARDEEYVRRRSTEALLSLSNISPRDVGLIAMVEEVVRVAQVMTEAERVCLFFVDDAADELWVAKSVDFDDAKIKIGEGLCGHAAATGGTVNVIDSYEDPRFDGRWDKQTGFVTKG 1098
            + V +IIELLESTAADSPLISPAALL RVEGLLLRGTGATS DALLVDRWFNKLLHFSPATASXXXXXXXXXXXXXX                             HEVAFNTRAVCDIGEGIAGM AM GRKL+LKDCST+Q RRRGK LYGT+YTSGSVVCWPVSALPTEVGVTRAEAETSA EQLEDVDGDDETEEARPSPGPAERVLAVL+VHC DGVLSAAAVEALH LGRLLVPLLTEALARDEEY+RRRSTEALLSLS+ISPRDVGLIAMVEEVV  AQVMTEAERV LFFVDDA  +LWVA SV F+D KIKIGEGLCGHAAATG TVNVIDS +DPR  GRWDKQTGFV KG
Sbjct:    1 MLVSEIIELLESTAADSPLISPAALLGRVEGLLLRGTGATSVDALLVDRWFNKLLHFSPATASXXXXXXXXXXXXXXTPIRDRRSFSDGHGGSQCQNKLKQQQQRQHEVAFNTRAVCDIGEGIAGMAAMTGRKLQLKDCSTRQQRRRGKTLYGTKYTSGSVVCWPVSALPTEVGVTRAEAETSALEQLEDVDGDDETEEARPSPGPAERVLAVLRVHCVDGVLSAAAVEALHGLGRLLVPLLTEALARDEEYMRRRSTEALLSLSSISPRDVGLIAMVEEVVHAAQVMTEAERVRLFFVDDAEHKLWVATSVGFEDPKIKIGEGLCGHAAATGRTVNVIDSCKDPRSVGRWDKQTGFVAKG 361          
BLAST of mRNA_Ecto-sp8_S_contig10351.570.1 vs. uniprot
Match: A0A327JCU6_9BACT (HD-GYP domain-containing protein n=1 Tax=Candidatus Melainabacteria bacterium TaxID=2052166 RepID=A0A327JCU6_9BACT)

HSP 1 Score: 88.2 bits (217), Expect = 1.820e-14
Identity = 47/146 (32.19%), Postives = 84/146 (57.53%), Query Frame = 1
Query:  727 LVPLLTEALARDE----EYVRRRSTEALLSLSNISPRDVGLIAMVEEVVRVAQVMTEAERVCLFFVDDAADELW--VAKSVDFDDAKIKIGEGLCGHAAATGGTVNVIDSYEDPRFDGRWDKQTGFVTKGVLCVPIPPPDQVVLGA 1146
            L+P +T+ L + E    E +++ S  ALL + +    +  +  +++ + +  ++  +A+R  +F  D   DE+W  VA  +D  + +    +GL GH   TG T+N+ D+Y DPRF+   DKQTG+ TK +LC+PI   ++ ++GA
Sbjct:  133 LIPTITDLLKQLEDKSSETLKKGSLIALLKIGHEIAAETDIDTLLKVIAQETRIAIKADRCTVFLYDKEKDEIWSKVALGLDSKEIRFPANKGLAGHVIKTGETINIKDAYADPRFNKDIDKQTGYKTKTILCMPIKNHNREIIGA 278          
BLAST of mRNA_Ecto-sp8_S_contig10351.570.1 vs. uniprot
Match: A0A1F9X6I0_9BACT (Uncharacterized protein n=1 Tax=Elusimicrobia bacterium RIFOXYA2_FULL_39_19 TaxID=1797957 RepID=A0A1F9X6I0_9BACT)

HSP 1 Score: 87.4 bits (215), Expect = 3.080e-14
Identity = 40/110 (36.36%), Postives = 66/110 (60.00%), Query Frame = 1
Query:  793 ALLSLSNISPRDVGLIAMVEEVVRVAQVMTEAERVCLFFVDDAADELW--VAKSVDFDDAKIKIGEGLCGHAAATGGTVNVIDSYEDPRFDGRWDKQTGFVTKGVLCVPI 1116
            ALL +S +  ++  L  ++  ++     + +AER  LF  D   +ELW  +A+ ++  + ++ +G G+ G+ A TG  +N+ D+Y DPRFD   DK TGF T+ VLCVP+
Sbjct:   99 ALLEISRLLTKETSLNKLLNLIIDQTTKLMDAERTTLFLYDSDTNELWSYIAQDLEIKEIRLPLGRGIAGNVAKTGKMINIRDAYADPRFDDNLDKNTGFKTRSVLCVPL 208          
BLAST of mRNA_Ecto-sp8_S_contig10351.570.1 vs. uniprot
Match: A0A382FG64_9ZZZZ (HAMP domain-containing protein (Fragment) n=1 Tax=marine metagenome TaxID=408172 RepID=A0A382FG64_9ZZZZ)

HSP 1 Score: 83.6 bits (205), Expect = 2.100e-13
Identity = 46/127 (36.22%), Postives = 74/127 (58.27%), Query Frame = 1
Query:  748 ALARDEEY--VRRRSTEALLSLSNISPRDVGLIAMVEEVVRVAQVMTEAERVCLFFVDDAADELWVAKSVDFDDAKIKI--GEGLCGHAAATGGTVNVIDSYEDPRFDGRWDKQTGFVTKGVLCVPI 1116
            A+AR  E+   +RR  + LL +SN     + L  ++E+++  A  + +AER  L+  D   + LW   +   DD +I +  G+G+ G    TG T+N+ DSY+DPRF+   D+ TGF T+ +LC+PI
Sbjct:  214 AIARSLEFDQQQRRDEKQLLEISNALVTQLNLDLLLEKIMAAATGLLDAERSTLYLWDPKEEILWSRVAEGLDDFRITLEAGQGIAGTVFQTGETINIEDSYKDPRFNPEIDRLTGFQTRSLLCLPI 340          
BLAST of mRNA_Ecto-sp8_S_contig10351.570.1 vs. uniprot
Match: A0A2V9K0E4_9BACT (Uncharacterized protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V9K0E4_9BACT)

HSP 1 Score: 83.2 bits (204), Expect = 6.870e-13
Identity = 45/134 (33.58%), Postives = 71/134 (52.99%), Query Frame = 1
Query:  721 RLLVPLLTEALARDEEYVRRRSTEALLSLSNISPRDVGLIAMVEEVVRVAQVMTEAERVCLFFVDDAADELW--VAKSVDFDDAKIKIGEGLCGHAAATGGTVNVIDSYEDPRFDGRWDKQTGFVTKGVLCVPI 1116
            RL    L +AL              L+  S      + L  ++  ++ VA+   EAER  LF VD+   E+W  +A+ ++  + ++ +G+G+ GH A TG  VN+ D+Y D RF+   DKQTGF T+ + C+PI
Sbjct:  145 RLASVALRDALLLSSTQRTMNKLAFLVEASKALGSTLDLSELLARILDVAKSQVEAERGTLFLVDEKKSEMWSLIAQGLEKQEIRLPLGKGIAGHVAETGEIVNISDAYADSRFNTEVDKQTGFRTRNIFCMPI 278          
BLAST of mRNA_Ecto-sp8_S_contig10351.570.1 vs. uniprot
Match: A0A534UXJ8_9DELT (GAF domain-containing protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A534UXJ8_9DELT)

HSP 1 Score: 82.0 bits (201), Expect = 1.560e-12
Identity = 38/114 (33.33%), Postives = 69/114 (60.53%), Query Frame = 1
Query:  781 RSTEALLSLSNISPRDVGLIAMVEEVVRVAQVMTEAERVCLFFVDDAADELW--VAKSVDFDDAKIKIGEGLCGHAAATGGTVNVIDSYEDPRFDGRWDKQTGFVTKGVLCVPI 1116
            R+ +ALL ++     ++ L  +++ +V  A  + +AER  LF  D   +ELW    + ++ ++ ++ +G G+ G  A T   +N+ D+Y DPRFD  +DKQTG+ T+ +LC+P+
Sbjct:   11 RNLKALLGVAKALASEIKLDNLLQVIVAKAAEVMDAERATLFLYDKPRNELWSKTTQKLEINEIRVPLGVGIAGIVAKTRALINISDAYADPRFDPTFDKQTGYRTRSILCLPL 124          
BLAST of mRNA_Ecto-sp8_S_contig10351.570.1 vs. uniprot
Match: A0A0S4N9J5_9BACT (Signal transduction histidine kinase n=1 Tax=Candidatus Thermokryptus mobilis TaxID=1643428 RepID=A0A0S4N9J5_9BACT)

HSP 1 Score: 80.5 bits (197), Expect = 4.480e-12
Identity = 43/141 (30.50%), Postives = 83/141 (58.87%), Query Frame = 1
Query:  745 EALARDEEYVRRRSTEALLSLS---NISPR---DVGLIAMVEEVVRVAQVMTEAERVCLFFVDDAADELW--VAKSVDFDDAKIKIGEGLCGHAAATGGTVNVIDSYEDPRFDGRWDKQTGFVTKGVLCVPIPPPDQVVLG 1143
            E L RD     +  TE +  L+    I+ R    + +  +++ ++ +A  +T A+R  ++ VD+ + E+W  V +  +  + ++KIG+G+ G+ A TG  +N++D+Y+DPRF+   D++TG+ TK +LC PI   +  ++G
Sbjct:  137 ERLLRDFLEYEKEVTEQINKLNYLIEITKRVNSTIDIDELLKIILEIALEITNADRGTVYLVDEMSGEIWSKVLQGDEIREIRLKIGQGIAGYVAQTGEVINLVDAYQDPRFNPEIDRKTGYRTKTILCQPIKDKNDKIVG 277          
BLAST of mRNA_Ecto-sp8_S_contig10351.570.1 vs. uniprot
Match: A0A0T5ZM72_9BACT (GAF domain-containing protein n=1 Tax=Candidatus Dadabacteria bacterium CSP1-2 TaxID=1640508 RepID=A0A0T5ZM72_9BACT)

HSP 1 Score: 80.1 bits (196), Expect = 5.070e-12
Identity = 47/129 (36.43%), Postives = 76/129 (58.91%), Query Frame = 1
Query:  766 EYVRRRST-EALLSLSNISPRDVGLIAMVEEVVRVAQVMTEAERVCLFFVDDAADELW--VAKSVDFDDAKIKIGEGLCGHAAATGGTVNVIDSYEDPRFDGRWDKQTGFVTKGVLCVPIPPPDQVVLG 1143
            + V+ RS  E   +L+     D  L  +++EV RV    TEA+R  +F VD    +LW  +A+ ++  + +I +  G+ GH A T   +N+ D+Y+DPRF+   DKQTG+ TK +LCVP+   ++ V+G
Sbjct:    7 QLVKLRSLLEIARALTAEKDLDRLLSLILQEVTRV----TEADRSSVFLVDRERRQLWSRIAQGLEIKEIRIPLASGIAGHVAITRKILNIPDAYQDPRFNSEVDKQTGYKTKTILCVPMMNREEEVIG 131          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig10351.570.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G099_ECTSI8.250e-25094.53Phosphodiesterase n=2 Tax=Ectocarpus TaxID=2879 Re... [more]
D7G095_ECTSI5.830e-19192.82Phosphodiesterase n=1 Tax=Ectocarpus siliculosus T... [more]
A0A6H5KY22_9PHAE2.420e-16782.27Phosphodiesterase n=1 Tax=Ectocarpus sp. CCAP 1310... [more]
A0A327JCU6_9BACT1.820e-1432.19HD-GYP domain-containing protein n=1 Tax=Candidatu... [more]
A0A1F9X6I0_9BACT3.080e-1436.36Uncharacterized protein n=1 Tax=Elusimicrobia bact... [more]
A0A382FG64_9ZZZZ2.100e-1336.22HAMP domain-containing protein (Fragment) n=1 Tax=... [more]
A0A2V9K0E4_9BACT6.870e-1333.58Uncharacterized protein n=1 Tax=Acidobacteria bact... [more]
A0A534UXJ8_9DELT1.560e-1233.33GAF domain-containing protein n=1 Tax=Deltaproteob... [more]
A0A0S4N9J5_9BACT4.480e-1230.50Signal transduction histidine kinase n=1 Tax=Candi... [more]
A0A0T5ZM72_9BACT5.070e-1236.43GAF domain-containing protein n=1 Tax=Candidatus D... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig10351contigEcto-sp8_S_contig10351:454..3862 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score739.6
Seed ortholog evalue9.6e-211
Seed eggNOG ortholog2880.D7G099
Model size2171
Hectar predicted targeting categoryother localisation
Exons3
EggNOG free text desc.3',5'-cyclic-nucleotide phosphodiesterase activity
EggNOG OGsKOG3689@1,KOG3689@2759
Cds size1461
COG Functional cat.T
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681143134.063382-CDS-Ecto-sp8_S_contig10351:453..4891681143134.063382-CDS-Ecto-sp8_S_contig10351:453..489Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig10351 454..489 +
1681143134.0754085-CDS-Ecto-sp8_S_contig10351:1284..23451681143134.0754085-CDS-Ecto-sp8_S_contig10351:1284..2345Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig10351 1285..2345 +
1681143134.0862844-CDS-Ecto-sp8_S_contig10351:2788..31521681143134.0862844-CDS-Ecto-sp8_S_contig10351:2788..3152Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig10351 2789..3152 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681143134.0989149-UTR-Ecto-sp8_S_contig10351:3152..38621681143134.0989149-UTR-Ecto-sp8_S_contig10351:3152..3862Ectocarpus species8 EcLAC_412UTREcto-sp8_S_contig10351 3153..3862 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig10351.570.1prot_Ecto-sp8_S_contig10351.570.1Ectocarpus species8 EcLAC_412polypeptideEcto-sp8_S_contig10351 454..3152 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp8_S_contig10351.570.1

>prot_Ecto-sp8_S_contig10351.570.1 ID=prot_Ecto-sp8_S_contig10351.570.1|Name=mRNA_Ecto-sp8_S_contig10351.570.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=487bp
MGADVMPLTVEQIIELLESTAADSPLISPAALLCRVEGLLLRGTGATSAD
ALLVDRWFNKLLHFSPATASGSGGGDGEAKGARETPSRDRLSFSDADGGS
QSQKQHQQQQQHEVAFNTRAVCDIGEGIAGMVAMAGRKLRLKDCSTQQHR
RRGKALYGTEYTSGSVVCWPVSALPTEVGVTRAEAETSAFEQLEDVDGDD
ETEEARPSPGPAERVLAVLQVHCADGVLSAAAVEALHDLGRLLVPLLTEA
LARDEEYVRRRSTEALLSLSNISPRDVGLIAMVEEVVRVAQVMTEAERVC
LFFVDDAADELWVAKSVDFDDAKIKIGEGLCGHAAATGGTVNVIDSYEDP
RFDGRWDKQTGFVTKGVLCVPIPPPDQVVLGASPAAGGGSRGGMCGGGRD
GPEGQESSGSLQDGSAELPRRDDGGTDPRVSMGVDGFQPLRRGGSQQHPA
AWEGGGARRRRRRSRSRTRAAAGPRRCRRDPWPCWR*
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mRNA from alignment at Ecto-sp8_S_contig10351:454..3862+

Legend: CDSpolypeptideUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp8_S_contig10351.570.1 ID=mRNA_Ecto-sp8_S_contig10351.570.1|Name=mRNA_Ecto-sp8_S_contig10351.570.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=3409bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10351:454..3862+ (Ectocarpus species8 EcLAC_412)
ATGGGTGCTGATGTCATGCCGTTGACTGTCGAGCAGGTGTGGTAATCAAT AAGTGACTGAGTGACTGGGGTGGCACCTCAATAGGGGAACCTGTCATCTA GGATTGATGCGGCCAGTACCCAATATTCCGGGTATGCGGGTACGCATAAT TTTTCCCTCCACGCATTTTCCGGAAGGGTCTGTGTCCCCCCTTTTCTCGC CAGCTTGTGTCGTTCAGGCTTTCCGCGTACCAACCAGTCGTGCGACGAGC TCTTGCGTGCTGGCCATTTTGTGCGCGCCAATGCGTTCGGTGTTGGAGAC TGCCTCGGAAGAACATTGCCAGTCATCAACATTCAACATCAATCATCATC GAAGCGACATGACGATTCGCGACGATTAGGATTCTCAAATGGGTCGGTGC ATCGTGCGATTTCATCCATCCCCGTTGTACGTATGTGAACACGAAGCATA CCGATTCAGGCATGCACCCACTGCTGTGTGGGCTTGGCATAGGCAAAACT CCCTAACCCAGATATTCCCCACAACGCGAAGGCCGCCATGACCTGACGGC AAAAGTAACTCACAGAACACGCACTTGCTTGTTTATCTGCCCTTTCAAAC CGCAAGTGACACGCAACTTATACTACTGCTGTACAATCCATCCAGAGCAT GTTTTCTTGCGTGACAGCTGCGGTGGTGCCTGTTTGGTGTTGCAGCTCTC CCAGCATATAGAGAACTAACTTGCGCATCGCGAAATAATCCCTCTCGCCG TCCTACAGCAGCAGTAGAATACGCCGCCTCACCGTCGCGGACCGTGCCTA CCGGTTCGGTTCGCCTTGACCTCCGTTGCAGATAATCGAGCTGCTGGAGT CGACCGCGGCGGACTCGCCTCTCATCTCGCCGGCGGCTCTCCTGTGCCGG GTGGAGGGCCTGCTGCTGCGAGGGACGGGGGCGACAAGCGCGGACGCCTT GCTCGTGGACCGCTGGTTCAACAAACTCTTGCACTTCTCACCAGCCACTG CTTCTGGGAGCGGCGGCGGCGATGGGGAGGCGAAAGGGGCTCGAGAGACG CCGAGCCGAGATCGTCTTTCGTTTTCTGATGCCGACGGCGGTAGTCAGAG CCAAAAGCAGCATCAGCAGCAACAGCAGCATGAGGTTGCGTTTAATACGA GGGCGGTGTGCGATATCGGCGAGGGAATCGCAGGCATGGTGGCGATGGCC GGACGGAAGTTGCGACTCAAGGATTGCTCCACGCAGCAACACCGGCGGCG AGGAAAGGCCTTGTACGGCACCGAGTACACCAGCGGCAGCGTGGTGTGCT GGCCGGTCTCAGCGCTCCCTACAGAAGTGGGAGTTACGCGAGCGGAAGCA GAAACCTCCGCGTTCGAGCAGTTGGAGGACGTGGACGGAGATGACGAAAC GGAGGAGGCGAGGCCATCGCCGGGCCCCGCGGAGAGGGTACTAGCGGTGT TGCAGGTCCACTGCGCGGACGGCGTGCTCTCGGCAGCGGCGGTGGAAGCC CTGCACGACTTAGGGAGACTGCTGGTGCCGCTGCTCACGGAGGCGCTGGC TCGTGACGAGGAGTACGTGCGCCGCCGCTCTACCGAGGCGCTGCTGTCGC TGAGCAATATCAGCCCACGAGACGTGGGCCTGATCGCGATGGTCGAGGAG GTTGTCCGTGTTGCACAGGTAATGACGGAAGCGGAGAGGGTTTGCCTCTT CTTCGTGGACGACGCGGCGGACGAGCTGTGGGTGGCCAAGTCAGTGGACT TCGATGACGCCAAGATCAAGATCGGGGAAGGCTTGTGCGGGCACGCGGCG GCGACCGGAGGGACCGTGAACGTGATCGACAGCTACGAGGACCCCCGCTT CGACGGGCGGTGGGACAAGCAGACCGGCTTTGTCACCAAGGGGTGCGTCG TGTTTTGCGTGCATACGTGTGGCATGGGCAGCGTCGTTCTTCGCGTGCCG TCGTGAGCACTCCATCCAGCCTCTTCGTTCGCGGCACCTCGGTTAGATTC AGATTTGTGTCCCGACAAGTCTTGCGATGATGTCGAGAGCACAACCACGC TTACGTCGTTGAGTATCTGCGTAGAAATATCCCCGTTGGTGCTCTCCGTC AACGCAGGCAGGTAGCATCGCGAGATTTACGACCGTCACAGACAAGCTCG CAGATATCCTCTTCGCCATGTAATACAAATGCCTCCTTCCTTCCAACTCC GACAAACACCAACTTCTGACTCTTCCCCTCTTTGGTGGGATCCTTCTGAA ATACTCGCTTTATTCCGATCATGCCTTTAGACGCTCCTTTTCCCTGATAA CCTGTCACCTCTCCTTGCGTTCTCTCGCCGTGTAGCGTATTGTGCGTGCC AATCCCACCTCCAGACCAAGTCGTCTTGGGCGCTTCGCCGGCGGCGGGCG GCGGCAGCCGCGGTGGCATGTGTGGGGGGGGTCGGGACGGACCCGAAGGA CAAGAAAGCAGCGGCAGCCTCCAAGACGGAAGCGCCGAGCTGCCGAGGAG GGACGACGGCGGTACCGATCCCCGAGTGTCGATGGGCGTGGACGGCTTCC AGCCCCTACGGCGGGGAGGATCGCAGCAGCATCCGGCCGCGTGGGAGGGG GGGGGGGCGCGCCGCCGCCGCCGCCGCAGCCGCAGCCGAACCCGCGCCGC CGCCGGTCCTCGAAGATGCCGGCGAGACCCCTGGCCGTGCTGGAGGTGAT CAACAAGCGGGGCAATGGCGTCTTCAACGAGCACGACGAGAACGCGCTGG TGGGCCTTTGCGCGCGCATAGAGCTGCTCCTCCGGAACAAGGCCGCGGAG GTGGCTCTCCTGTACTCGGGCATGACCGAGCGCTCCCTGATCCGCCAGAG GAACGGCGGCGGCGGTGGCGGCGACGGCGAAGCCTCGACCAACTACGCCC GCGTCGAGAGCACCATCATGCGGCTCTACAGCGAGGCGCCGTTCCTGGCG GACGCCGCGGCGCCCGGAGAGCAGCAGCAGCGGGCGCCGAGCCAGAGGGA CCACACGGCCGCGCGGGGTGGGGACGTTGGCGGCGGCGGCAGCGGGGGCA GCCGCCGCCGGGGCCGCCGGCGCTCGAAAAGCGACACCGAAGCCCCCCCG GGTATGGATGTCGGGCAGACTGCCGAGGGCGACGGCGTTAGAAGGCGGAG TGGAAGTGACAGCTCCGTCTCTGTGGGGACGGCGGCGGCGTCCGGCGAGG GGGAGGGGTGCCCTTCGGGAGCCGGCGGTAGCGGCGGCGGCGGCGGGGGT GGTCCCGGTGTTGATCGGCCGATCAGCGCGGAGAGCGCGCAGGAGGAGTC GGAGCTAGTGGACCTGAGCATGAACCTGTTCAACCTGAGCTCGGAGCAAC TCCTGTCCTTGGTGGGGCGGTTCTTCCGAAATATGGAGCTGACAGACAGG TTTCAGGTG
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Coding sequence (CDS) from alignment at Ecto-sp8_S_contig10351:454..3862+

>mRNA_Ecto-sp8_S_contig10351.570.1 ID=mRNA_Ecto-sp8_S_contig10351.570.1|Name=mRNA_Ecto-sp8_S_contig10351.570.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=1461bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10351:454..3862+ (Ectocarpus species8 EcLAC_412)
ATGGGTGCTGATGTCATGCCGTTGACTGTCGAGCAGATAATCGAGCTGCT
GGAGTCGACCGCGGCGGACTCGCCTCTCATCTCGCCGGCGGCTCTCCTGT
GCCGGGTGGAGGGCCTGCTGCTGCGAGGGACGGGGGCGACAAGCGCGGAC
GCCTTGCTCGTGGACCGCTGGTTCAACAAACTCTTGCACTTCTCACCAGC
CACTGCTTCTGGGAGCGGCGGCGGCGATGGGGAGGCGAAAGGGGCTCGAG
AGACGCCGAGCCGAGATCGTCTTTCGTTTTCTGATGCCGACGGCGGTAGT
CAGAGCCAAAAGCAGCATCAGCAGCAACAGCAGCATGAGGTTGCGTTTAA
TACGAGGGCGGTGTGCGATATCGGCGAGGGAATCGCAGGCATGGTGGCGA
TGGCCGGACGGAAGTTGCGACTCAAGGATTGCTCCACGCAGCAACACCGG
CGGCGAGGAAAGGCCTTGTACGGCACCGAGTACACCAGCGGCAGCGTGGT
GTGCTGGCCGGTCTCAGCGCTCCCTACAGAAGTGGGAGTTACGCGAGCGG
AAGCAGAAACCTCCGCGTTCGAGCAGTTGGAGGACGTGGACGGAGATGAC
GAAACGGAGGAGGCGAGGCCATCGCCGGGCCCCGCGGAGAGGGTACTAGC
GGTGTTGCAGGTCCACTGCGCGGACGGCGTGCTCTCGGCAGCGGCGGTGG
AAGCCCTGCACGACTTAGGGAGACTGCTGGTGCCGCTGCTCACGGAGGCG
CTGGCTCGTGACGAGGAGTACGTGCGCCGCCGCTCTACCGAGGCGCTGCT
GTCGCTGAGCAATATCAGCCCACGAGACGTGGGCCTGATCGCGATGGTCG
AGGAGGTTGTCCGTGTTGCACAGGTAATGACGGAAGCGGAGAGGGTTTGC
CTCTTCTTCGTGGACGACGCGGCGGACGAGCTGTGGGTGGCCAAGTCAGT
GGACTTCGATGACGCCAAGATCAAGATCGGGGAAGGCTTGTGCGGGCACG
CGGCGGCGACCGGAGGGACCGTGAACGTGATCGACAGCTACGAGGACCCC
CGCTTCGACGGGCGGTGGGACAAGCAGACCGGCTTTGTCACCAAGGGCGT
ATTGTGCGTGCCAATCCCACCTCCAGACCAAGTCGTCTTGGGCGCTTCGC
CGGCGGCGGGCGGCGGCAGCCGCGGTGGCATGTGTGGGGGGGGTCGGGAC
GGACCCGAAGGACAAGAAAGCAGCGGCAGCCTCCAAGACGGAAGCGCCGA
GCTGCCGAGGAGGGACGACGGCGGTACCGATCCCCGAGTGTCGATGGGCG
TGGACGGCTTCCAGCCCCTACGGCGGGGAGGATCGCAGCAGCATCCGGCC
GCGTGGGAGGGGGGGGGGGCGCGCCGCCGCCGCCGCCGCAGCCGCAGCCG
AACCCGCGCCGCCGCCGGTCCTCGAAGATGCCGGCGAGACCCCTGGCCGT
GCTGGAGGTGA
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